AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0769800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769800 MtrunA17_Chr0c01g0489461 93.674 411 4 2 12 421 9 398 0.0 780
Msa0769800 MtrunA17_Chr3g0132471 41.365 249 102 6 178 415 97 312 1.26e-49 171
Msa0769800 MtrunA17_Chr1g0191571 43.043 230 99 5 190 415 129 330 1.07e-48 169
Msa0769800 MtrunA17_Chr7g0273081 41.700 247 108 7 179 421 98 312 1.54e-47 165
Msa0769800 MtrunA17_Chr8g0366551 38.644 295 121 8 152 421 60 319 1.79e-46 162
Msa0769800 MtrunA17_Chr8g0345871 48.707 232 79 5 186 416 170 362 2.50e-46 163
Msa0769800 MtrunA17_Chr2g0287761 41.014 217 97 3 197 413 1 186 1.54e-42 148
Msa0769800 MtrunA17_Chr5g0426851 40.084 237 112 7 178 411 79 288 2.07e-41 148
Msa0769800 MtrunA17_Chr1g0158941 34.818 247 129 2 175 410 65 290 3.15e-41 147
Msa0769800 MtrunA17_Chr3g0126381 35.052 194 93 4 250 410 4 197 5.68e-27 107
Msa0769800 MtrunA17_Chr8g0366751 26.000 250 133 10 172 417 439 640 9.39e-14 73.2
Msa0769800 MtrunA17_Chr3g0126361 45.556 90 37 3 154 231 46 135 8.77e-13 65.9
Msa0769800 MtrunA17_Chr5g0411341 25.210 238 128 7 172 403 470 663 5.62e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0769800 AT3G24140.2 57.583 422 104 13 45 421 11 402 1.31e-134 392
Msa0769800 AT3G24140.1 57.346 422 105 13 45 421 11 402 7.52e-134 391
Msa0769800 AT1G22490.1 40.171 234 105 5 187 419 105 304 2.90e-43 154
Msa0769800 AT1G72210.1 39.241 237 110 4 187 421 115 319 1.67e-42 152
Msa0769800 AT3G06120.1 39.462 223 101 4 197 415 1 193 3.74e-42 147
Msa0769800 AT1G22490.2 41.827 208 87 4 186 393 104 277 4.37e-40 146
Msa0769800 AT1G72210.2 39.423 208 93 3 187 393 115 290 9.72e-38 139
Msa0769800 AT2G46810.2 38.222 225 96 5 190 412 114 297 9.16e-36 134
Msa0769800 AT2G46810.3 38.222 225 96 5 190 412 174 357 4.90e-35 133
Msa0769800 AT2G46810.1 38.222 225 96 5 190 412 186 369 5.67e-35 133
Msa0769800 AT4G01460.1 35.345 232 118 4 187 417 105 305 7.27e-35 132
Msa0769800 AT4G01460.2 35.345 232 118 4 187 417 105 305 7.27e-35 132
Msa0769800 AT5G46690.1 38.462 247 111 6 186 415 77 299 8.79e-34 129
Msa0769800 AT2G46810.4 40.488 205 80 4 190 393 114 277 9.35e-34 129
Msa0769800 AT3G61950.2 36.404 228 101 5 187 412 117 302 1.64e-33 128
Msa0769800 AT3G61950.6 37.850 214 90 4 187 399 117 288 2.72e-33 127
Msa0769800 AT3G61950.1 36.404 228 101 5 187 412 168 353 4.64e-33 127
Msa0769800 AT3G61950.3 37.850 214 90 4 187 399 168 339 9.18e-33 127
Msa0769800 AT5G46690.2 39.462 223 95 5 187 393 78 276 1.51e-30 119
Msa0769800 AT5G65320.1 33.047 233 122 5 187 416 92 293 3.72e-26 107
Msa0769800 AT5G65320.2 34.615 208 104 4 187 393 92 268 5.51e-23 98.2
Msa0769800 AT5G53210.2 51.111 90 23 1 195 284 100 168 1.19e-20 93.2
Msa0769800 AT5G53210.2 50.000 74 37 0 323 396 274 347 5.53e-15 76.3
Msa0769800 AT5G53210.1 51.111 90 23 1 195 284 100 168 1.70e-20 92.8
Msa0769800 AT5G53210.1 46.591 88 47 0 323 410 274 361 3.23e-18 85.9
Msa0769800 AT3G61950.4 60.417 48 19 0 187 234 168 215 9.55e-13 67.8
Msa0769800 AT3G61950.5 60.417 48 19 0 187 234 168 215 9.55e-13 67.8
Msa0769800 AT4G17880.1 24.800 250 119 7 155 395 380 569 4.26e-12 68.6
Msa0769800 AT1G32640.1 23.220 323 157 11 82 394 364 605 6.48e-12 67.8

Find 90 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGATTCTTCGCGGTTTA+AGG 0.091676 5_2:-39102870 None:intergenic
GTGATGCAGTTTGCAGATTT+TGG 0.187925 5_2:+39102836 Msa0769800:CDS
TCACTTGTCTTAACAGTTCT+TGG 0.201116 5_2:-39103133 None:intergenic
TCCTCAGACACATGCTGTTT+GGG 0.211654 5_2:+39103463 Msa0769800:CDS
ATGTTGAGTGGTGATGGGTT+AGG 0.277243 5_2:+39102959 Msa0769800:CDS
GGTGATCAAGCTTCTATAAT+TGG 0.280305 5_2:+39103738 Msa0769800:CDS
CCTCCTGAAGTTTGTGTTTG+AGG 0.310661 5_2:-39102770 None:intergenic
TCGCGGTTTAAGGCTAATTT+AGG 0.318430 5_2:-39102860 None:intergenic
CCTATAGTACTCTTGTCATT+TGG 0.326217 5_2:+39104505 Msa0769800:three_prime_UTR
GTCCTCAGACACATGCTGTT+TGG 0.328930 5_2:+39103462 Msa0769800:CDS
GTAGAAAGAGGCTTCTAGTA+TGG 0.336451 5_2:-39104532 None:intergenic
TGTTGAGTGGTGATGGGTTA+GGG 0.360967 5_2:+39102960 Msa0769800:CDS
ACTAGCTTCATCTGGTCATT+TGG 0.371823 5_2:-39103918 None:intergenic
CCAAATGACAAGAGTACTAT+AGG 0.373583 5_2:-39104505 None:intergenic
CACAATTCATTTGTAGAAAG+AGG 0.374807 5_2:-39104544 None:intergenic
AAGCTAGTTGAGATGGAAAC+TGG 0.382861 5_2:+39103933 Msa0769800:CDS
AGGAAACTTGAGAAAATAAA+CGG 0.392733 5_2:-39102903 None:intergenic
CACCACTCAACATCAAGTTT+TGG 0.393130 5_2:-39102949 None:intergenic
AACCAGGCATGAGGGATCTA+AGG 0.393915 5_2:-39103234 None:intergenic
GATGTAGAAGTGAAACTTCT+AGG 0.406812 5_2:+39103996 Msa0769800:CDS
TATAGAGTTTGTGAGGGAAT+TGG 0.411761 5_2:+39103767 Msa0769800:CDS
GCCTTAAACCGCGAAGAATC+AGG 0.418841 5_2:+39102869 Msa0769800:CDS
CCATCTCAACTAGCTTCATC+TGG 0.419409 5_2:-39103926 None:intergenic
AAGCACAATCAAAACAAGTT+GGG 0.436877 5_2:+39103841 Msa0769800:CDS
TCTATCTTATTGTTTAAGAC+AGG 0.457469 5_2:-39102923 None:intergenic
TGCTGAGAGTAAGTCATGTT+TGG 0.461833 5_2:+39103971 Msa0769800:CDS
GGAAACTTGAGAAAATAAAC+GGG 0.463016 5_2:-39102902 None:intergenic
TATCGAGTTGGCGAAACATC+GGG 0.463450 5_2:+39102713 Msa0769800:CDS
GTTCGTATTGTTGTTGCTGT+TGG 0.465123 5_2:-39102679 None:intergenic
ATCCTCTCAAGGAGAAGGCC+TGG 0.465771 5_2:+39104038 Msa0769800:CDS
GTCCTTAGATCCCTCATGCC+TGG 0.466194 5_2:+39103232 Msa0769800:CDS
TCATGAAGAAGCTCGAGTTT+CGG 0.469424 5_2:+39103042 Msa0769800:CDS
CAAAAGAGAAGGAGACTACT+AGG 0.474641 5_2:+39103816 Msa0769800:CDS
GAAGCACAATCAAAACAAGT+TGG 0.486078 5_2:+39103840 Msa0769800:CDS
TGGTCATTTGGTAAAGGAGC+TGG 0.494479 5_2:-39103906 None:intergenic
AAGAACTGTCTGTTCAATAG+TGG 0.499927 5_2:-39104126 None:intergenic
AACTTGATGTTGAGTGGTGA+TGG 0.501933 5_2:+39102953 Msa0769800:CDS
TGTGTTGAAGCTACAAGGTA+TGG 0.505565 5_2:-39102627 None:intergenic
CCAGATGAAGCTAGTTGAGA+TGG 0.511789 5_2:+39103926 Msa0769800:CDS
GCCTGGTTCATACGTGCAAA+GGG 0.513019 5_2:+39103249 Msa0769800:CDS
TTCATCTGGTCATTTGGTAA+AGG 0.516461 5_2:-39103912 None:intergenic
GAATGAGATTTATTTAAGAG+AGG 0.518849 5_2:-39104586 None:intergenic
CATGTCTTCAAGAGCAGCAA+TGG 0.521985 5_2:-39104075 None:intergenic
TCTTTATTCTTTCAATGTCA+AGG 0.523113 5_2:+39104145 Msa0769800:CDS
GTATCGAGTTGGCGAAACAT+CGG 0.525109 5_2:+39102712 Msa0769800:CDS
ATGGTCTTGATCAACTGTCC+AGG 0.530534 5_2:-39104056 None:intergenic
TGCCTGGTTCATACGTGCAA+AGG 0.533937 5_2:+39103248 Msa0769800:CDS
AGCTAGTGATACAAGGTTCA+CGG 0.534009 5_2:+39104364 Msa0769800:CDS
GATCAAGCTTCTATAATTGG+AGG 0.535041 5_2:+39103741 Msa0769800:CDS
CCTCAGACACATGCTGTTTG+GGG 0.545270 5_2:+39103464 Msa0769800:CDS
GAGGGGCTATAGAGTTTGTG+AGG 0.549633 5_2:+39103760 Msa0769800:CDS
GTCCAGGCCTTCTCCTTGAG+AGG 0.550662 5_2:-39104040 None:intergenic
ACCCTTTGCACGTATGAACC+AGG 0.550812 5_2:-39103250 None:intergenic
TCAAGTGTGTTGAAGCTACA+AGG 0.560312 5_2:-39102632 None:intergenic
CTTCGATACCTGATTCTTCG+CGG 0.569325 5_2:-39102877 None:intergenic
TGAATTGTGTAATCTATCAA+AGG 0.569575 5_2:+39104558 Msa0769800:three_prime_UTR
ATCAAGCTTCTATAATTGGA+GGG 0.571097 5_2:+39103742 Msa0769800:CDS
TTAAAATCCTCTCAAGGAGA+AGG 0.575154 5_2:+39104033 Msa0769800:CDS
GTCTAGAATCACAAAAGAGA+AGG 0.576264 5_2:+39103805 Msa0769800:CDS
ATGCCTCAAACACAAACTTC+AGG 0.576898 5_2:+39102767 Msa0769800:CDS
TGACTCACATAGCTGTTGAA+AGG 0.591781 5_2:+39103176 Msa0769800:CDS
GTTGGTGATGATGATGATCA+AGG 0.593143 5_2:-39102661 None:intergenic
AGCACAATCAAAACAAGTTG+GGG 0.596948 5_2:+39103842 Msa0769800:CDS
TGAAAACAACAACGGAATGG+TGG 0.599929 5_2:+39102736 Msa0769800:CDS
TCCAGGTAGCTAGTGATACA+AGG 0.601551 5_2:+39104357 Msa0769800:intron
GTTGAGTGGTGATGGGTTAG+GGG 0.601937 5_2:+39102961 Msa0769800:CDS
GCACGTATGAACCAGGCATG+AGG 0.603673 5_2:-39103243 None:intergenic
CAATGATTAAAATCCTCTCA+AGG 0.606240 5_2:+39104027 Msa0769800:CDS
CCCCAAACAGCATGTGTCTG+AGG 0.606355 5_2:-39103464 None:intergenic
CACGTATGAACCAGGCATGA+GGG 0.608646 5_2:-39103242 None:intergenic
ACTTGATGTTGAGTGGTGAT+GGG 0.614962 5_2:+39102954 Msa0769800:CDS
GAGGTTCAAATTGACAAGCG+TGG 0.615809 5_2:+39102994 Msa0769800:CDS
TAGCTGTTGAAAGGAATCGA+AGG 0.623409 5_2:+39103185 Msa0769800:CDS
GGGTGAAAACAACAACGGAA+TGG 0.626152 5_2:+39102733 Msa0769800:CDS
AGGGGCTATAGAGTTTGTGA+GGG 0.626575 5_2:+39103761 Msa0769800:CDS
AAAACTTAGTATCTGCTGAA+CGG 0.628856 5_2:-39104405 None:intergenic
TCAAGCTTCTATAATTGGAG+GGG 0.631781 5_2:+39103743 Msa0769800:CDS
CCTCAAACACAAACTTCAGG+AGG 0.642336 5_2:+39102770 Msa0769800:CDS
TAGTGGTGATGTTTGTGTGA+AGG 0.650341 5_2:-39104109 None:intergenic
TTGGTGATGATGATGATCAA+GGG 0.654699 5_2:-39102660 None:intergenic
GTGTTGAAGCTACAAGGTAT+GGG 0.656678 5_2:-39102626 None:intergenic
AAAATTTGAGCAGAACAACA+TGG 0.657106 5_2:-39102585 None:intergenic
CTCAGACACATGCTGTTTGG+GGG 0.660367 5_2:+39103465 Msa0769800:CDS
GACCAAAACTTGATGTTGAG+TGG 0.682351 5_2:+39102947 Msa0769800:CDS
GTTCAAATTGACAAGCGTGG+AGG 0.694433 5_2:+39102997 Msa0769800:CDS
TTGAAGCTACAAGGTATGGG+TGG 0.705250 5_2:-39102623 None:intergenic
GGTTAGGGGAAAATGACGAG+AGG 0.728621 5_2:+39102975 Msa0769800:CDS
ACATCGGGTGAAAACAACAA+CGG 0.729217 5_2:+39102728 Msa0769800:CDS
AGTTTCGGATGAGAACAACT+CGG 0.736695 5_2:+39103057 Msa0769800:CDS
GAAACTTGAGAAAATAAACG+GGG 0.795358 5_2:-39102901 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAAGAAAATC+TGG + chr5_2:39104282-39104301 Msa0769800:intron 10.0%
!! TAAAAAATAAAAGAAAATCT+GGG + chr5_2:39104283-39104302 Msa0769800:intron 10.0%
!! ATAAAAAATAAAAGAAAATC+TGG + chr5_2:39104282-39104301 Msa0769800:intron 10.0%
!! TAAAAAATAAAAGAAAATCT+GGG + chr5_2:39104283-39104302 Msa0769800:intron 10.0%
!!! TAAATTTTAGAGAACAATTA+CGG - chr5_2:39103600-39103619 None:intergenic 15.0%
!!! TGTTTTTGATTTTACAATAT+AGG + chr5_2:39103716-39103735 Msa0769800:intron 15.0%
!!! GTTTTTGATTTTACAATATA+GGG + chr5_2:39103717-39103736 Msa0769800:intron 15.0%
!! AAAAAATAAAAGAAAATCTG+GGG + chr5_2:39104284-39104303 Msa0769800:intron 15.0%
!!! TATTTTATATATATGTTGTG+TGG + chr5_2:39104476-39104495 Msa0769800:three_prime_UTR 15.0%
!!! TAAATTTTAGAGAACAATTA+CGG - chr5_2:39103600-39103619 None:intergenic 15.0%
!!! TGTTTTTGATTTTACAATAT+AGG + chr5_2:39103716-39103735 Msa0769800:intron 15.0%
!!! GTTTTTGATTTTACAATATA+GGG + chr5_2:39103717-39103736 Msa0769800:intron 15.0%
!! AAAAAATAAAAGAAAATCTG+GGG + chr5_2:39104284-39104303 Msa0769800:intron 15.0%
!!! TATTTTATATATATGTTGTG+TGG + chr5_2:39104476-39104495 Msa0769800:three_prime_UTR 15.0%
!! CAAGAAAAAATGTATGTTAT+AGG + chr5_2:39103295-39103314 Msa0769800:intron 20.0%
!!! GTAACAATAATTTGAAACTT+TGG - chr5_2:39103578-39103597 None:intergenic 20.0%
!!! AATCTCATTCAATGAATTTT+CGG + chr5_2:39104599-39104618 Msa0769800:three_prime_UTR 20.0%
!! CAAGAAAAAATGTATGTTAT+AGG + chr5_2:39103295-39103314 Msa0769800:intron 20.0%
!!! GTAACAATAATTTGAAACTT+TGG - chr5_2:39103578-39103597 None:intergenic 20.0%
!!! AATCTCATTCAATGAATTTT+CGG + chr5_2:39104599-39104618 Msa0769800:three_prime_UTR 20.0%
! AGGAAACTTGAGAAAATAAA+CGG - chr5_2:39102906-39102925 None:intergenic 25.0%
!! TCTATCTTATTGTTTAAGAC+AGG - chr5_2:39102926-39102945 None:intergenic 25.0%
! ATTGCACCAAAATTAAACAA+TGG + chr5_2:39103638-39103657 Msa0769800:intron 25.0%
!!! CTCTAACCATTGTTTAATTT+TGG - chr5_2:39103647-39103666 None:intergenic 25.0%
! TCTTTATTCTTTCAATGTCA+AGG + chr5_2:39104145-39104164 Msa0769800:CDS 25.0%
! TGAATTGTGTAATCTATCAA+AGG + chr5_2:39104558-39104577 Msa0769800:three_prime_UTR 25.0%
! GAATGAGATTTATTTAAGAG+AGG - chr5_2:39104589-39104608 None:intergenic 25.0%
! AGGAAACTTGAGAAAATAAA+CGG - chr5_2:39102906-39102925 None:intergenic 25.0%
!! TCTATCTTATTGTTTAAGAC+AGG - chr5_2:39102926-39102945 None:intergenic 25.0%
! ATTGCACCAAAATTAAACAA+TGG + chr5_2:39103638-39103657 Msa0769800:intron 25.0%
!!! CTCTAACCATTGTTTAATTT+TGG - chr5_2:39103647-39103666 None:intergenic 25.0%
! TCTTTATTCTTTCAATGTCA+AGG + chr5_2:39104145-39104164 Msa0769800:CDS 25.0%
! TGAATTGTGTAATCTATCAA+AGG + chr5_2:39104558-39104577 Msa0769800:three_prime_UTR 25.0%
! GAATGAGATTTATTTAAGAG+AGG - chr5_2:39104589-39104608 None:intergenic 25.0%
! CTCAAATTTTGAATCTTTGC+AGG + chr5_2:39102598-39102617 Msa0769800:CDS 30.0%
GAAACTTGAGAAAATAAACG+GGG - chr5_2:39102904-39102923 None:intergenic 30.0%
GGAAACTTGAGAAAATAAAC+GGG - chr5_2:39102905-39102924 None:intergenic 30.0%
!! ATGTTATAGGTGCTGAAATT+TGG + chr5_2:39103308-39103327 Msa0769800:intron 30.0%
!! TGTTATAGGTGCTGAAATTT+GGG + chr5_2:39103309-39103328 Msa0769800:intron 30.0%
CTGATACCATGTTGAAATTT+GGG - chr5_2:39103381-39103400 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG - chr5_2:39103382-39103401 None:intergenic 30.0%
ATCAAGCTTCTATAATTGGA+GGG + chr5_2:39103742-39103761 Msa0769800:CDS 30.0%
AAGCACAATCAAAACAAGTT+GGG + chr5_2:39103841-39103860 Msa0769800:CDS 30.0%
CAATGATTAAAATCCTCTCA+AGG + chr5_2:39104027-39104046 Msa0769800:CDS 30.0%
TTCAATGTCAAGGTATATTC+AGG + chr5_2:39104155-39104174 Msa0769800:intron 30.0%
TCAATGTCAAGGTATATTCA+GGG + chr5_2:39104156-39104175 Msa0769800:intron 30.0%
AAAACTTAGTATCTGCTGAA+CGG - chr5_2:39104408-39104427 None:intergenic 30.0%
CACAATTCATTTGTAGAAAG+AGG - chr5_2:39104547-39104566 None:intergenic 30.0%
! CTCAAATTTTGAATCTTTGC+AGG + chr5_2:39102598-39102617 Msa0769800:CDS 30.0%
GAAACTTGAGAAAATAAACG+GGG - chr5_2:39102904-39102923 None:intergenic 30.0%
GGAAACTTGAGAAAATAAAC+GGG - chr5_2:39102905-39102924 None:intergenic 30.0%
!! ATGTTATAGGTGCTGAAATT+TGG + chr5_2:39103308-39103327 Msa0769800:intron 30.0%
!! TGTTATAGGTGCTGAAATTT+GGG + chr5_2:39103309-39103328 Msa0769800:intron 30.0%
CTGATACCATGTTGAAATTT+GGG - chr5_2:39103381-39103400 None:intergenic 30.0%
TCTGATACCATGTTGAAATT+TGG - chr5_2:39103382-39103401 None:intergenic 30.0%
ATCAAGCTTCTATAATTGGA+GGG + chr5_2:39103742-39103761 Msa0769800:CDS 30.0%
AAGCACAATCAAAACAAGTT+GGG + chr5_2:39103841-39103860 Msa0769800:CDS 30.0%
CAATGATTAAAATCCTCTCA+AGG + chr5_2:39104027-39104046 Msa0769800:CDS 30.0%
TTCAATGTCAAGGTATATTC+AGG + chr5_2:39104155-39104174 Msa0769800:intron 30.0%
TCAATGTCAAGGTATATTCA+GGG + chr5_2:39104156-39104175 Msa0769800:intron 30.0%
AAAACTTAGTATCTGCTGAA+CGG - chr5_2:39104408-39104427 None:intergenic 30.0%
CACAATTCATTTGTAGAAAG+AGG - chr5_2:39104547-39104566 None:intergenic 30.0%
!! TTGGTGATGATGATGATCAA+GGG - chr5_2:39102663-39102682 None:intergenic 35.0%
TGCAAGAGAACAACAAAAAG+AGG + chr5_2:39103104-39103123 Msa0769800:CDS 35.0%
TCACTTGTCTTAACAGTTCT+TGG - chr5_2:39103136-39103155 None:intergenic 35.0%
!! GTTATAGGTGCTGAAATTTG+GGG + chr5_2:39103310-39103329 Msa0769800:intron 35.0%
TTAGGTCCCAAATTTCAACA+TGG + chr5_2:39103372-39103391 Msa0769800:intron 35.0%
GGTGATCAAGCTTCTATAAT+TGG + chr5_2:39103738-39103757 Msa0769800:CDS 35.0%
GATCAAGCTTCTATAATTGG+AGG + chr5_2:39103741-39103760 Msa0769800:CDS 35.0%
TCAAGCTTCTATAATTGGAG+GGG + chr5_2:39103743-39103762 Msa0769800:CDS 35.0%
TATAGAGTTTGTGAGGGAAT+TGG + chr5_2:39103767-39103786 Msa0769800:CDS 35.0%
! GTCTAGAATCACAAAAGAGA+AGG + chr5_2:39103805-39103824 Msa0769800:CDS 35.0%
GAAGCACAATCAAAACAAGT+TGG + chr5_2:39103840-39103859 Msa0769800:CDS 35.0%
AGCACAATCAAAACAAGTTG+GGG + chr5_2:39103842-39103861 Msa0769800:CDS 35.0%
TTCATCTGGTCATTTGGTAA+AGG - chr5_2:39103915-39103934 None:intergenic 35.0%
GATGTAGAAGTGAAACTTCT+AGG + chr5_2:39103996-39104015 Msa0769800:CDS 35.0%
TTAAAATCCTCTCAAGGAGA+AGG + chr5_2:39104033-39104052 Msa0769800:CDS 35.0%
AAGAACTGTCTGTTCAATAG+TGG - chr5_2:39104129-39104148 None:intergenic 35.0%
!!! GTATTTTTTGTGATGTGTCC+AGG + chr5_2:39104340-39104359 Msa0769800:intron 35.0%
!! CCAAATGACAAGAGTACTAT+AGG - chr5_2:39104508-39104527 None:intergenic 35.0%
CCTATAGTACTCTTGTCATT+TGG + chr5_2:39104505-39104524 Msa0769800:three_prime_UTR 35.0%
!! TTGGTGATGATGATGATCAA+GGG - chr5_2:39102663-39102682 None:intergenic 35.0%
TGCAAGAGAACAACAAAAAG+AGG + chr5_2:39103104-39103123 Msa0769800:CDS 35.0%
TCACTTGTCTTAACAGTTCT+TGG - chr5_2:39103136-39103155 None:intergenic 35.0%
!! GTTATAGGTGCTGAAATTTG+GGG + chr5_2:39103310-39103329 Msa0769800:intron 35.0%
TTAGGTCCCAAATTTCAACA+TGG + chr5_2:39103372-39103391 Msa0769800:intron 35.0%
GGTGATCAAGCTTCTATAAT+TGG + chr5_2:39103738-39103757 Msa0769800:CDS 35.0%
GATCAAGCTTCTATAATTGG+AGG + chr5_2:39103741-39103760 Msa0769800:CDS 35.0%
TCAAGCTTCTATAATTGGAG+GGG + chr5_2:39103743-39103762 Msa0769800:CDS 35.0%
TATAGAGTTTGTGAGGGAAT+TGG + chr5_2:39103767-39103786 Msa0769800:CDS 35.0%
! GTCTAGAATCACAAAAGAGA+AGG + chr5_2:39103805-39103824 Msa0769800:CDS 35.0%
GAAGCACAATCAAAACAAGT+TGG + chr5_2:39103840-39103859 Msa0769800:CDS 35.0%
AGCACAATCAAAACAAGTTG+GGG + chr5_2:39103842-39103861 Msa0769800:CDS 35.0%
TTCATCTGGTCATTTGGTAA+AGG - chr5_2:39103915-39103934 None:intergenic 35.0%
GATGTAGAAGTGAAACTTCT+AGG + chr5_2:39103996-39104015 Msa0769800:CDS 35.0%
TTAAAATCCTCTCAAGGAGA+AGG + chr5_2:39104033-39104052 Msa0769800:CDS 35.0%
AAGAACTGTCTGTTCAATAG+TGG - chr5_2:39104129-39104148 None:intergenic 35.0%
!!! GTATTTTTTGTGATGTGTCC+AGG + chr5_2:39104340-39104359 Msa0769800:intron 35.0%
!! CCAAATGACAAGAGTACTAT+AGG - chr5_2:39104508-39104527 None:intergenic 35.0%
CCTATAGTACTCTTGTCATT+TGG + chr5_2:39104505-39104524 Msa0769800:three_prime_UTR 35.0%
GTGTTGAAGCTACAAGGTAT+GGG - chr5_2:39102629-39102648 None:intergenic 40.0%
TGTGTTGAAGCTACAAGGTA+TGG - chr5_2:39102630-39102649 None:intergenic 40.0%
TCAAGTGTGTTGAAGCTACA+AGG - chr5_2:39102635-39102654 None:intergenic 40.0%
!! GTTGGTGATGATGATGATCA+AGG - chr5_2:39102664-39102683 None:intergenic 40.0%
! GTTCGTATTGTTGTTGCTGT+TGG - chr5_2:39102682-39102701 None:intergenic 40.0%
!!! CAGCTTTTGAAGTATCGAGT+TGG + chr5_2:39102701-39102720 Msa0769800:CDS 40.0%
ACATCGGGTGAAAACAACAA+CGG + chr5_2:39102728-39102747 Msa0769800:CDS 40.0%
TGAAAACAACAACGGAATGG+TGG + chr5_2:39102736-39102755 Msa0769800:CDS 40.0%
ATGCCTCAAACACAAACTTC+AGG + chr5_2:39102767-39102786 Msa0769800:CDS 40.0%
! CAAACTTCAGGAGGCTTTTA+TGG + chr5_2:39102779-39102798 Msa0769800:CDS 40.0%
! GTGATGCAGTTTGCAGATTT+TGG + chr5_2:39102836-39102855 Msa0769800:CDS 40.0%
! TCGCGGTTTAAGGCTAATTT+AGG - chr5_2:39102863-39102882 None:intergenic 40.0%
GACCAAAACTTGATGTTGAG+TGG + chr5_2:39102947-39102966 Msa0769800:CDS 40.0%
! CACCACTCAACATCAAGTTT+TGG - chr5_2:39102952-39102971 None:intergenic 40.0%
AACTTGATGTTGAGTGGTGA+TGG + chr5_2:39102953-39102972 Msa0769800:CDS 40.0%
ACTTGATGTTGAGTGGTGAT+GGG + chr5_2:39102954-39102973 Msa0769800:CDS 40.0%
TCATGAAGAAGCTCGAGTTT+CGG + chr5_2:39103042-39103061 Msa0769800:CDS 40.0%
AGTTTCGGATGAGAACAACT+CGG + chr5_2:39103057-39103076 Msa0769800:CDS 40.0%
TGACTCACATAGCTGTTGAA+AGG + chr5_2:39103176-39103195 Msa0769800:CDS 40.0%
TAGCTGTTGAAAGGAATCGA+AGG + chr5_2:39103185-39103204 Msa0769800:CDS 40.0%
CTAACTCATCCTCACAAAAC+CGG + chr5_2:39103334-39103353 Msa0769800:intron 40.0%
TGGTATCAGAGCGTGATTAA+CGG + chr5_2:39103392-39103411 Msa0769800:intron 40.0%
TCCTGTCTCCTTAGAAATCA+AGG + chr5_2:39103525-39103544 Msa0769800:intron 40.0%
! TCCTTGATTTCTAAGGAGAC+AGG - chr5_2:39103529-39103548 None:intergenic 40.0%
AACTGCGTCCTTGATTTCTA+AGG - chr5_2:39103536-39103555 None:intergenic 40.0%
CAAAAGAGAAGGAGACTACT+AGG + chr5_2:39103816-39103835 Msa0769800:CDS 40.0%
AAAGGAGCTGGAAAAAATGG+AGG - chr5_2:39103897-39103916 None:intergenic 40.0%
GGTAAAGGAGCTGGAAAAAA+TGG - chr5_2:39103900-39103919 None:intergenic 40.0%
! ACTAGCTTCATCTGGTCATT+TGG - chr5_2:39103921-39103940 None:intergenic 40.0%
AAGCTAGTTGAGATGGAAAC+TGG + chr5_2:39103933-39103952 Msa0769800:CDS 40.0%
TGCTGAGAGTAAGTCATGTT+TGG + chr5_2:39103971-39103990 Msa0769800:CDS 40.0%
! TAGTGGTGATGTTTGTGTGA+AGG - chr5_2:39104112-39104131 None:intergenic 40.0%
AGGTATATTCAGGGTGTGTT+TGG + chr5_2:39104165-39104184 Msa0769800:intron 40.0%
TTGGATTGAGGGTTTAAGAG+AGG + chr5_2:39104184-39104203 Msa0769800:intron 40.0%
ATTGAGGGTTTAAGAGAGGA+AGG + chr5_2:39104188-39104207 Msa0769800:intron 40.0%
AGCTAGTGATACAAGGTTCA+CGG + chr5_2:39104364-39104383 Msa0769800:CDS 40.0%
GTAGAAAGAGGCTTCTAGTA+TGG - chr5_2:39104535-39104554 None:intergenic 40.0%
GTGTTGAAGCTACAAGGTAT+GGG - chr5_2:39102629-39102648 None:intergenic 40.0%
TGTGTTGAAGCTACAAGGTA+TGG - chr5_2:39102630-39102649 None:intergenic 40.0%
TCAAGTGTGTTGAAGCTACA+AGG - chr5_2:39102635-39102654 None:intergenic 40.0%
!! GTTGGTGATGATGATGATCA+AGG - chr5_2:39102664-39102683 None:intergenic 40.0%
! GTTCGTATTGTTGTTGCTGT+TGG - chr5_2:39102682-39102701 None:intergenic 40.0%
!!! CAGCTTTTGAAGTATCGAGT+TGG + chr5_2:39102701-39102720 Msa0769800:CDS 40.0%
ACATCGGGTGAAAACAACAA+CGG + chr5_2:39102728-39102747 Msa0769800:CDS 40.0%
TGAAAACAACAACGGAATGG+TGG + chr5_2:39102736-39102755 Msa0769800:CDS 40.0%
ATGCCTCAAACACAAACTTC+AGG + chr5_2:39102767-39102786 Msa0769800:CDS 40.0%
! CAAACTTCAGGAGGCTTTTA+TGG + chr5_2:39102779-39102798 Msa0769800:CDS 40.0%
! GTGATGCAGTTTGCAGATTT+TGG + chr5_2:39102836-39102855 Msa0769800:CDS 40.0%
! TCGCGGTTTAAGGCTAATTT+AGG - chr5_2:39102863-39102882 None:intergenic 40.0%
GACCAAAACTTGATGTTGAG+TGG + chr5_2:39102947-39102966 Msa0769800:CDS 40.0%
! CACCACTCAACATCAAGTTT+TGG - chr5_2:39102952-39102971 None:intergenic 40.0%
AACTTGATGTTGAGTGGTGA+TGG + chr5_2:39102953-39102972 Msa0769800:CDS 40.0%
ACTTGATGTTGAGTGGTGAT+GGG + chr5_2:39102954-39102973 Msa0769800:CDS 40.0%
TCATGAAGAAGCTCGAGTTT+CGG + chr5_2:39103042-39103061 Msa0769800:CDS 40.0%
AGTTTCGGATGAGAACAACT+CGG + chr5_2:39103057-39103076 Msa0769800:CDS 40.0%
TGACTCACATAGCTGTTGAA+AGG + chr5_2:39103176-39103195 Msa0769800:CDS 40.0%
TAGCTGTTGAAAGGAATCGA+AGG + chr5_2:39103185-39103204 Msa0769800:CDS 40.0%
CTAACTCATCCTCACAAAAC+CGG + chr5_2:39103334-39103353 Msa0769800:intron 40.0%
TGGTATCAGAGCGTGATTAA+CGG + chr5_2:39103392-39103411 Msa0769800:intron 40.0%
TCCTGTCTCCTTAGAAATCA+AGG + chr5_2:39103525-39103544 Msa0769800:intron 40.0%
! TCCTTGATTTCTAAGGAGAC+AGG - chr5_2:39103529-39103548 None:intergenic 40.0%
AACTGCGTCCTTGATTTCTA+AGG - chr5_2:39103536-39103555 None:intergenic 40.0%
CAAAAGAGAAGGAGACTACT+AGG + chr5_2:39103816-39103835 Msa0769800:CDS 40.0%
AAAGGAGCTGGAAAAAATGG+AGG - chr5_2:39103897-39103916 None:intergenic 40.0%
GGTAAAGGAGCTGGAAAAAA+TGG - chr5_2:39103900-39103919 None:intergenic 40.0%
! ACTAGCTTCATCTGGTCATT+TGG - chr5_2:39103921-39103940 None:intergenic 40.0%
AAGCTAGTTGAGATGGAAAC+TGG + chr5_2:39103933-39103952 Msa0769800:CDS 40.0%
TGCTGAGAGTAAGTCATGTT+TGG + chr5_2:39103971-39103990 Msa0769800:CDS 40.0%
! TAGTGGTGATGTTTGTGTGA+AGG - chr5_2:39104112-39104131 None:intergenic 40.0%
AGGTATATTCAGGGTGTGTT+TGG + chr5_2:39104165-39104184 Msa0769800:intron 40.0%
TTGGATTGAGGGTTTAAGAG+AGG + chr5_2:39104184-39104203 Msa0769800:intron 40.0%
ATTGAGGGTTTAAGAGAGGA+AGG + chr5_2:39104188-39104207 Msa0769800:intron 40.0%
AGCTAGTGATACAAGGTTCA+CGG + chr5_2:39104364-39104383 Msa0769800:CDS 40.0%
GTAGAAAGAGGCTTCTAGTA+TGG - chr5_2:39104535-39104554 None:intergenic 40.0%
TTGAAGCTACAAGGTATGGG+TGG - chr5_2:39102626-39102645 None:intergenic 45.0%
!! GTATCGAGTTGGCGAAACAT+CGG + chr5_2:39102712-39102731 Msa0769800:CDS 45.0%
!! TATCGAGTTGGCGAAACATC+GGG + chr5_2:39102713-39102732 Msa0769800:CDS 45.0%
GGGTGAAAACAACAACGGAA+TGG + chr5_2:39102733-39102752 Msa0769800:CDS 45.0%
CCTCCTGAAGTTTGTGTTTG+AGG - chr5_2:39102773-39102792 None:intergenic 45.0%
CCTCAAACACAAACTTCAGG+AGG + chr5_2:39102770-39102789 Msa0769800:CDS 45.0%
ACCTGATTCTTCGCGGTTTA+AGG - chr5_2:39102873-39102892 None:intergenic 45.0%
CTTCGATACCTGATTCTTCG+CGG - chr5_2:39102880-39102899 None:intergenic 45.0%
!! ATGTTGAGTGGTGATGGGTT+AGG + chr5_2:39102959-39102978 Msa0769800:CDS 45.0%
!! TGTTGAGTGGTGATGGGTTA+GGG + chr5_2:39102960-39102979 Msa0769800:CDS 45.0%
GAGGTTCAAATTGACAAGCG+TGG + chr5_2:39102994-39103013 Msa0769800:CDS 45.0%
GTTCAAATTGACAAGCGTGG+AGG + chr5_2:39102997-39103016 Msa0769800:CDS 45.0%
!! CGGTTTTGTGAGGATGAGTT+AGG - chr5_2:39103336-39103355 None:intergenic 45.0%
CTAACTCATCCTTACAGAGC+CGG - chr5_2:39103356-39103375 None:intergenic 45.0%
! TCCTCAGACACATGCTGTTT+GGG + chr5_2:39103463-39103482 Msa0769800:CDS 45.0%
AGGGGCTATAGAGTTTGTGA+GGG + chr5_2:39103761-39103780 Msa0769800:CDS 45.0%
TGGTCATTTGGTAAAGGAGC+TGG - chr5_2:39103909-39103928 None:intergenic 45.0%
! CCATCTCAACTAGCTTCATC+TGG - chr5_2:39103929-39103948 None:intergenic 45.0%
CCAGATGAAGCTAGTTGAGA+TGG + chr5_2:39103926-39103945 Msa0769800:CDS 45.0%
! ATGGTCTTGATCAACTGTCC+AGG - chr5_2:39104059-39104078 None:intergenic 45.0%
CATGTCTTCAAGAGCAGCAA+TGG - chr5_2:39104078-39104097 None:intergenic 45.0%
TTCAGGGTGTGTTTGGATTG+AGG + chr5_2:39104172-39104191 Msa0769800:intron 45.0%
TCAGGGTGTGTTTGGATTGA+GGG + chr5_2:39104173-39104192 Msa0769800:intron 45.0%
AGGGTTTAAGAGAGGAAGGA+AGG + chr5_2:39104192-39104211 Msa0769800:intron 45.0%
GGGTTTAAGAGAGGAAGGAA+GGG + chr5_2:39104193-39104212 Msa0769800:intron 45.0%
GGTTTAAGAGAGGAAGGAAG+GGG + chr5_2:39104194-39104213 Msa0769800:intron 45.0%
TCCAGGTAGCTAGTGATACA+AGG + chr5_2:39104357-39104376 Msa0769800:intron 45.0%
ACCTTGTATCACTAGCTACC+TGG - chr5_2:39104361-39104380 None:intergenic 45.0%
TTGAAGCTACAAGGTATGGG+TGG - chr5_2:39102626-39102645 None:intergenic 45.0%
!! GTATCGAGTTGGCGAAACAT+CGG + chr5_2:39102712-39102731 Msa0769800:CDS 45.0%
!! TATCGAGTTGGCGAAACATC+GGG + chr5_2:39102713-39102732 Msa0769800:CDS 45.0%
GGGTGAAAACAACAACGGAA+TGG + chr5_2:39102733-39102752 Msa0769800:CDS 45.0%
CCTCCTGAAGTTTGTGTTTG+AGG - chr5_2:39102773-39102792 None:intergenic 45.0%
CCTCAAACACAAACTTCAGG+AGG + chr5_2:39102770-39102789 Msa0769800:CDS 45.0%
ACCTGATTCTTCGCGGTTTA+AGG - chr5_2:39102873-39102892 None:intergenic 45.0%
CTTCGATACCTGATTCTTCG+CGG - chr5_2:39102880-39102899 None:intergenic 45.0%
!! ATGTTGAGTGGTGATGGGTT+AGG + chr5_2:39102959-39102978 Msa0769800:CDS 45.0%
!! TGTTGAGTGGTGATGGGTTA+GGG + chr5_2:39102960-39102979 Msa0769800:CDS 45.0%
GAGGTTCAAATTGACAAGCG+TGG + chr5_2:39102994-39103013 Msa0769800:CDS 45.0%
GTTCAAATTGACAAGCGTGG+AGG + chr5_2:39102997-39103016 Msa0769800:CDS 45.0%
!! CGGTTTTGTGAGGATGAGTT+AGG - chr5_2:39103336-39103355 None:intergenic 45.0%
CTAACTCATCCTTACAGAGC+CGG - chr5_2:39103356-39103375 None:intergenic 45.0%
! TCCTCAGACACATGCTGTTT+GGG + chr5_2:39103463-39103482 Msa0769800:CDS 45.0%
AGGGGCTATAGAGTTTGTGA+GGG + chr5_2:39103761-39103780 Msa0769800:CDS 45.0%
TGGTCATTTGGTAAAGGAGC+TGG - chr5_2:39103909-39103928 None:intergenic 45.0%
! CCATCTCAACTAGCTTCATC+TGG - chr5_2:39103929-39103948 None:intergenic 45.0%
CCAGATGAAGCTAGTTGAGA+TGG + chr5_2:39103926-39103945 Msa0769800:CDS 45.0%
! ATGGTCTTGATCAACTGTCC+AGG - chr5_2:39104059-39104078 None:intergenic 45.0%
CATGTCTTCAAGAGCAGCAA+TGG - chr5_2:39104078-39104097 None:intergenic 45.0%
TTCAGGGTGTGTTTGGATTG+AGG + chr5_2:39104172-39104191 Msa0769800:intron 45.0%
TCAGGGTGTGTTTGGATTGA+GGG + chr5_2:39104173-39104192 Msa0769800:intron 45.0%
AGGGTTTAAGAGAGGAAGGA+AGG + chr5_2:39104192-39104211 Msa0769800:intron 45.0%
GGGTTTAAGAGAGGAAGGAA+GGG + chr5_2:39104193-39104212 Msa0769800:intron 45.0%
GGTTTAAGAGAGGAAGGAAG+GGG + chr5_2:39104194-39104213 Msa0769800:intron 45.0%
TCCAGGTAGCTAGTGATACA+AGG + chr5_2:39104357-39104376 Msa0769800:intron 45.0%
ACCTTGTATCACTAGCTACC+TGG - chr5_2:39104361-39104380 None:intergenic 45.0%
GCCTTAAACCGCGAAGAATC+AGG + chr5_2:39102869-39102888 Msa0769800:CDS 50.0%
!! GTTGAGTGGTGATGGGTTAG+GGG + chr5_2:39102961-39102980 Msa0769800:CDS 50.0%
GGTTAGGGGAAAATGACGAG+AGG + chr5_2:39102975-39102994 Msa0769800:CDS 50.0%
AACCAGGCATGAGGGATCTA+AGG - chr5_2:39103237-39103256 None:intergenic 50.0%
CACGTATGAACCAGGCATGA+GGG - chr5_2:39103245-39103264 None:intergenic 50.0%
TGCCTGGTTCATACGTGCAA+AGG + chr5_2:39103248-39103267 Msa0769800:CDS 50.0%
GCCTGGTTCATACGTGCAAA+GGG + chr5_2:39103249-39103268 Msa0769800:CDS 50.0%
ACCCTTTGCACGTATGAACC+AGG - chr5_2:39103253-39103272 None:intergenic 50.0%
!! CTTACAGAGCCGGTTTTGTG+AGG - chr5_2:39103346-39103365 None:intergenic 50.0%
! CTCACAAAACCGGCTCTGTA+AGG + chr5_2:39103344-39103363 Msa0769800:intron 50.0%
CGGCTCTGTAAGGATGAGTT+AGG + chr5_2:39103354-39103373 Msa0769800:intron 50.0%
GTCCTCAGACACATGCTGTT+TGG + chr5_2:39103462-39103481 Msa0769800:CDS 50.0%
! CCTCAGACACATGCTGTTTG+GGG + chr5_2:39103464-39103483 Msa0769800:CDS 50.0%
! CTCAGACACATGCTGTTTGG+GGG + chr5_2:39103465-39103484 Msa0769800:CDS 50.0%
AGGAGACAGGAACATACGTC+TGG - chr5_2:39103516-39103535 None:intergenic 50.0%
GAGGGGCTATAGAGTTTGTG+AGG + chr5_2:39103760-39103779 Msa0769800:CDS 50.0%
TTAAGAGAGGAAGGAAGGGG+AGG + chr5_2:39104197-39104216 Msa0769800:intron 50.0%
TAAGAGAGGAAGGAAGGGGA+GGG + chr5_2:39104198-39104217 Msa0769800:intron 50.0%
GCCTTAAACCGCGAAGAATC+AGG + chr5_2:39102869-39102888 Msa0769800:CDS 50.0%
!! GTTGAGTGGTGATGGGTTAG+GGG + chr5_2:39102961-39102980 Msa0769800:CDS 50.0%
GGTTAGGGGAAAATGACGAG+AGG + chr5_2:39102975-39102994 Msa0769800:CDS 50.0%
AACCAGGCATGAGGGATCTA+AGG - chr5_2:39103237-39103256 None:intergenic 50.0%
CACGTATGAACCAGGCATGA+GGG - chr5_2:39103245-39103264 None:intergenic 50.0%
TGCCTGGTTCATACGTGCAA+AGG + chr5_2:39103248-39103267 Msa0769800:CDS 50.0%
GCCTGGTTCATACGTGCAAA+GGG + chr5_2:39103249-39103268 Msa0769800:CDS 50.0%
ACCCTTTGCACGTATGAACC+AGG - chr5_2:39103253-39103272 None:intergenic 50.0%
!! CTTACAGAGCCGGTTTTGTG+AGG - chr5_2:39103346-39103365 None:intergenic 50.0%
! CTCACAAAACCGGCTCTGTA+AGG + chr5_2:39103344-39103363 Msa0769800:intron 50.0%
CGGCTCTGTAAGGATGAGTT+AGG + chr5_2:39103354-39103373 Msa0769800:intron 50.0%
GTCCTCAGACACATGCTGTT+TGG + chr5_2:39103462-39103481 Msa0769800:CDS 50.0%
! CCTCAGACACATGCTGTTTG+GGG + chr5_2:39103464-39103483 Msa0769800:CDS 50.0%
! CTCAGACACATGCTGTTTGG+GGG + chr5_2:39103465-39103484 Msa0769800:CDS 50.0%
AGGAGACAGGAACATACGTC+TGG - chr5_2:39103516-39103535 None:intergenic 50.0%
GAGGGGCTATAGAGTTTGTG+AGG + chr5_2:39103760-39103779 Msa0769800:CDS 50.0%
TTAAGAGAGGAAGGAAGGGG+AGG + chr5_2:39104197-39104216 Msa0769800:intron 50.0%
TAAGAGAGGAAGGAAGGGGA+GGG + chr5_2:39104198-39104217 Msa0769800:intron 50.0%
GTCCTTAGATCCCTCATGCC+TGG + chr5_2:39103232-39103251 Msa0769800:CDS 55.0%
GCACGTATGAACCAGGCATG+AGG - chr5_2:39103246-39103265 None:intergenic 55.0%
CCCCAAACAGCATGTGTCTG+AGG - chr5_2:39103467-39103486 None:intergenic 55.0%
! AGACACATGCTGTTTGGGGG+TGG + chr5_2:39103468-39103487 Msa0769800:CDS 55.0%
ATCCTCTCAAGGAGAAGGCC+TGG + chr5_2:39104038-39104057 Msa0769800:CDS 55.0%
GTCCTTAGATCCCTCATGCC+TGG + chr5_2:39103232-39103251 Msa0769800:CDS 55.0%
GCACGTATGAACCAGGCATG+AGG - chr5_2:39103246-39103265 None:intergenic 55.0%
CCCCAAACAGCATGTGTCTG+AGG - chr5_2:39103467-39103486 None:intergenic 55.0%
! AGACACATGCTGTTTGGGGG+TGG + chr5_2:39103468-39103487 Msa0769800:CDS 55.0%
ATCCTCTCAAGGAGAAGGCC+TGG + chr5_2:39104038-39104057 Msa0769800:CDS 55.0%
GTCCAGGCCTTCTCCTTGAG+AGG - chr5_2:39104043-39104062 None:intergenic 60.0%
GTCCAGGCCTTCTCCTTGAG+AGG - chr5_2:39104043-39104062 None:intergenic 60.0%
GCTGTTTGGGGGTGGTCGCA+CGG + chr5_2:39103476-39103495 Msa0769800:CDS 65.0%
GCTGTTTGGGGGTGGTCGCA+CGG + chr5_2:39103476-39103495 Msa0769800:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 39102587 39104638 39102587 ID=Msa0769800;Name=Msa0769800
chr5_2 mRNA 39102587 39104638 39102587 ID=Msa0769800-mRNA-1;Parent=Msa0769800;Name=Msa0769800-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.33|0.5|0.75|1|1|4|187|421
chr5_2 exon 39102587 39103270 39102587 ID=Msa0769800-mRNA-1:exon:12630;Parent=Msa0769800-mRNA-1
chr5_2 exon 39103456 39103518 39103456 ID=Msa0769800-mRNA-1:exon:12631;Parent=Msa0769800-mRNA-1
chr5_2 exon 39103738 39104166 39103738 ID=Msa0769800-mRNA-1:exon:12632;Parent=Msa0769800-mRNA-1
chr5_2 exon 39104362 39104638 39104362 ID=Msa0769800-mRNA-1:exon:12633;Parent=Msa0769800-mRNA-1
chr5_2 CDS 39102587 39103270 39102587 ID=Msa0769800-mRNA-1:cds;Parent=Msa0769800-mRNA-1
chr5_2 CDS 39103456 39103518 39103456 ID=Msa0769800-mRNA-1:cds;Parent=Msa0769800-mRNA-1
chr5_2 CDS 39103738 39104166 39103738 ID=Msa0769800-mRNA-1:cds;Parent=Msa0769800-mRNA-1
chr5_2 CDS 39104362 39104451 39104362 ID=Msa0769800-mRNA-1:cds;Parent=Msa0769800-mRNA-1
chr5_2 three_prime_UTR 39104452 39104638 39104452 ID=Msa0769800-mRNA-1:three_prime_utr;Parent=Msa0769800-mRNA-1
Gene Sequence

>Msa0769800

ATGTTGTTCTGCTCAAATTTTGAATCTTTGCAGGCACCACCCATACCTTGTAGCTTCAACACACTTGACTACTCCCTTGATCATCATCATCACCAACAGCAACAACAATACGAACAGCTTTTGAAGTATCGAGTTGGCGAAACATCGGGTGAAAACAACAACGGAATGGTGGATAATTACATGCCTCAAACACAAACTTCAGGAGGCTTTTATGGTGCAAACTCTTTTGATAAAATGAGTTTTGCAGATGTGATGCAGTTTGCAGATTTTGGACCTAAATTAGCCTTAAACCGCGAAGAATCAGGTATCGAAGACCCCGTTTATTTTCTCAAGTTTCCTGTCTTAAACAATAAGATAGAAGACCAAAACTTGATGTTGAGTGGTGATGGGTTAGGGGAAAATGACGAGAGGTTCAAATTGACAAGCGTGGAGGATAAATCAAGAGATCAACAAGATCATGAAGAAGCTCGAGTTTCGGATGAGAACAACTCGGTGCAAGAGAAGAATTGTGCAGTAGTGCAAGAGAACAACAAAAAGAGGAAGAGACCAAGAACTGTTAAGACAAGTGAAGAAGTTGAGAGTCAACGTATGACTCACATAGCTGTTGAAAGGAATCGAAGGAAACAAATGAATGAGCATCTTCGTGTCCTTAGATCCCTCATGCCTGGTTCATACGTGCAAAGGATGATCGTCCTCAGACACATGCTGTTTGGGGGTGGTCGCACGGTCTTCGTTCATCATCCAGACGGTGATCAAGCTTCTATAATTGGAGGGGCTATAGAGTTTGTGAGGGAATTGGAACAACTTCTTCAATGTCTAGAATCACAAAAGAGAAGGAGACTACTAGGAGAAGCACAATCAAAACAAGTTGGGGATTCATCTCTTGTATCAACACAACAACAGCCTCCATTTTTTCCAGCTCCTTTACCAAATGACCAGATGAAGCTAGTTGAGATGGAAACTGGACTTCAAGAAGAAACTGCTGAGAGTAAGTCATGTTTGGCTGATGTAGAAGTGAAACTTCTAGGATTTGATGCAATGATTAAAATCCTCTCAAGGAGAAGGCCTGGACAGTTGATCAAGACCATTGCTGCTCTTGAAGACATGCAGCTCATTATCCTTCACACAAACATCACCACTATTGAACAGACAGTTCTTTATTCTTTCAATGTCAAGGTAGCTAGTGATACAAGGTTCACGGCTGAAGATATAGCAAGCTCCGTTCAGCAGATACTAAGTTTTATTCATGCAAACACTAGCATGTGA

Protein sequence

>Msa0769800

MLFCSNFESLQAPPIPCSFNTLDYSLDHHHHQQQQQYEQLLKYRVGETSGENNNGMVDNYMPQTQTSGGFYGANSFDKMSFADVMQFADFGPKLALNREESGIEDPVYFLKFPVLNNKIEDQNLMLSGDGLGENDERFKLTSVEDKSRDQQDHEEARVSDENNSVQEKNCAVVQENNKKRKRPRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRMIVLRHMLFGGGRTVFVHHPDGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAQSKQVGDSSLVSTQQQPPFFPAPLPNDQMKLVEMETGLQEETAESKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDMQLIILHTNITTIEQTVLYSFNVKVASDTRFTAEDIASSVQQILSFIHANTSM*