AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0662820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662820 MtrunA17_Chr8g0346011 93.238 281 17 2 3 282 15 294 0.0 502
Msa0662820 MtrunA17_Chr3g0144311 56.000 200 72 9 18 209 23 214 4.89e-56 182
Msa0662820 MtrunA17_Chr4g0017401 45.725 269 111 10 9 247 1 264 1.42e-50 167
Msa0662820 MtrunA17_Chr3g0127751 52.000 175 75 6 1 170 1 171 1.52e-47 159
Msa0662820 MtrunA17_Chr5g0426311 77.011 87 20 0 15 101 7 93 1.93e-45 154
Msa0662820 MtrunA17_Chr7g0276531 63.636 99 34 1 9 105 1 99 2.08e-41 143
Msa0662820 MtrunA17_Chr4g0045921 48.810 84 43 0 20 103 72 155 5.22e-19 85.5
Msa0662820 MtrunA17_Chr8g0360551 42.857 98 56 0 5 102 54 151 8.28e-19 85.9
Msa0662820 MtrunA17_Chr2g0290191 36.066 122 74 2 25 143 5 125 3.44e-18 84.0
Msa0662820 MtrunA17_Chr3g0101061 41.250 80 46 1 13 92 29 107 2.02e-17 82.0
Msa0662820 MtrunA17_Chr7g0255011 43.373 83 47 0 20 102 123 205 3.39e-16 78.2
Msa0662820 MtrunA17_Chr2g0278661 44.000 75 41 1 19 92 2 76 4.24e-16 75.9
Msa0662820 MtrunA17_Chr5g0440831 42.169 83 48 0 20 102 161 243 9.41e-16 77.0
Msa0662820 MtrunA17_Chr5g0447761 44.000 75 41 1 25 99 7 80 1.84e-15 76.3
Msa0662820 MtrunA17_Chr4g0035051 43.421 76 42 1 25 99 9 84 6.73e-15 69.7
Msa0662820 MtrunA17_Chr4g0050781 41.250 80 40 2 14 92 3 76 1.64e-14 70.9
Msa0662820 MtrunA17_Chr1g0186351 36.250 80 50 1 20 99 2 80 4.00e-14 72.0
Msa0662820 MtrunA17_Chr4g0035001 43.590 78 39 2 25 99 7 82 6.58e-14 68.2
Msa0662820 MtrunA17_Chr3g0121631 40.580 69 41 0 24 92 36 104 7.51e-14 67.4
Msa0662820 MtrunA17_Chr4g0061451 41.026 78 45 1 24 100 42 119 1.53e-13 68.9
Msa0662820 MtrunA17_Chr4g0031091 45.070 71 38 1 24 93 33 103 2.88e-13 65.1
Msa0662820 MtrunA17_Chr7g0219021 38.961 77 46 1 25 100 41 117 3.05e-13 68.2
Msa0662820 MtrunA17_Chr4g0035031 43.421 76 42 1 25 99 9 84 3.18e-13 67.0
Msa0662820 MtrunA17_Chr3g0086861 39.024 82 41 2 24 100 44 121 6.19e-13 68.6
Msa0662820 MtrunA17_Chr7g0266751 33.333 99 62 2 25 122 33 128 6.00e-12 62.0
Msa0662820 MtrunA17_Chr3g0119311 34.783 69 41 1 24 92 36 100 1.72e-11 60.8
Msa0662820 MtrunA17_Chr7g0219031 44.444 63 32 1 25 84 41 103 2.03e-11 60.1
Msa0662820 MtrunA17_Chr3g0120721 40.909 66 39 0 25 90 19 84 2.36e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0662820 AT2G46780.1 56.031 257 74 10 1 223 1 252 2.09e-76 236
Msa0662820 AT2G46780.2 56.031 257 74 10 1 223 1 252 2.09e-76 236
Msa0662820 AT1G33470.2 55.414 157 65 3 19 170 2 158 1.75e-52 172
Msa0662820 AT1G33470.3 55.414 157 64 4 20 170 3 159 8.14e-51 167
Msa0662820 AT1G33470.1 55.063 158 65 4 19 170 2 159 9.64e-51 167
Msa0662820 AT1G20880.2 49.758 207 80 8 18 209 18 215 1.55e-48 162
Msa0662820 AT1G20880.3 49.758 207 80 8 18 209 18 215 1.55e-48 162
Msa0662820 AT1G20880.1 49.758 207 80 8 18 209 18 215 1.55e-48 162
Msa0662820 AT1G76460.1 47.170 212 78 7 18 209 18 215 4.42e-48 162
Msa0662820 AT1G22910.2 47.126 174 54 3 20 171 9 166 1.43e-44 151
Msa0662820 AT1G22910.1 47.126 174 54 3 20 171 9 166 2.20e-44 151
Msa0662820 AT1G22910.3 47.126 174 54 3 20 171 9 166 1.35e-43 152
Msa0662820 AT1G22330.1 71.765 85 24 0 18 102 11 95 6.99e-40 140
Msa0662820 AT1G78260.1 71.429 84 24 0 18 101 11 94 1.36e-39 140
Msa0662820 AT1G78260.2 71.429 84 24 0 18 101 11 94 3.55e-39 138
Msa0662820 AT3G54770.1 50.000 130 64 1 9 137 1 130 1.35e-38 136
Msa0662820 AT3G54770.3 50.000 130 64 1 9 137 1 130 1.51e-38 136
Msa0662820 AT5G11412.1 63.855 83 30 0 20 102 48 130 9.00e-35 124
Msa0662820 AT3G06970.1 48.333 120 52 2 20 129 8 127 2.13e-31 119
Msa0662820 AT5G53680.1 57.143 84 36 0 20 103 9 92 1.28e-30 113
Msa0662820 AT5G53720.1 57.500 80 34 0 24 103 9 88 2.61e-26 99.8
Msa0662820 AT3G54770.2 51.020 98 37 1 40 137 1 87 1.02e-25 101
Msa0662820 AT2G22090.1 50.602 83 41 0 20 102 100 182 1.10e-19 87.8
Msa0662820 AT2G22090.2 50.602 83 41 0 20 102 100 182 1.16e-19 87.8
Msa0662820 AT5G47620.1 48.529 68 34 1 25 92 7 73 2.37e-17 82.0
Msa0662820 AT5G47620.2 48.529 68 34 1 25 92 7 73 2.37e-17 82.0
Msa0662820 AT5G47620.5 48.529 68 34 1 25 92 7 73 2.37e-17 82.0
Msa0662820 AT5G47620.4 47.826 69 35 1 24 92 6 73 2.58e-17 82.0
Msa0662820 AT3G15010.1 40.816 98 58 0 5 102 56 153 3.04e-17 81.3
Msa0662820 AT3G15010.2 40.816 98 58 0 5 102 56 153 3.04e-17 81.3
Msa0662820 AT5G55550.5 39.726 73 43 1 20 92 2 73 1.88e-16 79.3
Msa0662820 AT5G55550.4 39.726 73 43 1 20 92 2 73 1.88e-16 79.3
Msa0662820 AT5G55550.9 39.726 73 43 1 20 92 2 73 1.88e-16 79.3
Msa0662820 AT5G55550.7 39.726 73 43 1 20 92 2 73 1.88e-16 79.3
Msa0662820 AT5G55550.1 39.726 73 43 1 20 92 2 73 1.88e-16 79.3
Msa0662820 AT5G55550.2 39.726 73 43 1 20 92 2 73 2.04e-16 79.3
Msa0662820 AT5G55550.3 39.726 73 43 1 20 92 2 73 2.04e-16 79.3
Msa0662820 AT5G55550.6 39.726 73 43 1 20 92 2 73 2.04e-16 79.3
Msa0662820 AT5G55550.11 39.726 73 43 1 20 92 2 73 2.04e-16 79.3
Msa0662820 AT5G55550.8 39.726 73 43 1 20 92 2 73 2.23e-16 79.3
Msa0662820 AT5G55550.10 39.726 73 43 1 20 92 2 73 2.45e-16 79.0
Msa0662820 AT4G26650.2 40.278 72 42 1 21 92 9 79 2.86e-16 79.0
Msa0662820 AT4G26650.1 40.278 72 42 1 21 92 12 82 2.99e-16 78.6
Msa0662820 AT3G07810.2 46.479 71 31 2 25 92 7 73 1.38e-15 77.0
Msa0662820 AT3G07810.1 46.479 71 31 2 25 92 7 73 1.39e-15 77.0
Msa0662820 AT2G41060.1 40.964 83 49 0 20 102 124 206 1.68e-15 76.6
Msa0662820 AT2G41060.3 40.964 83 49 0 20 102 124 206 1.68e-15 76.6
Msa0662820 AT2G41060.2 40.964 83 49 0 20 102 124 206 1.68e-15 76.6
Msa0662820 AT4G13850.4 44.444 72 36 1 24 95 35 102 1.98e-15 71.6
Msa0662820 AT4G13850.3 44.444 72 36 1 24 95 35 102 2.68e-15 71.6
Msa0662820 AT4G39260.2 43.421 76 42 1 25 99 7 82 2.71e-15 71.2
Msa0662820 AT3G56860.9 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.11 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.8 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.5 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.7 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.2 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.6 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.10 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.3 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.1 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT3G56860.4 42.169 83 48 0 20 102 136 218 2.97e-15 75.9
Msa0662820 AT4G13850.2 44.444 72 36 1 24 95 35 102 3.29e-15 71.6
Msa0662820 AT2G19380.1 44.444 81 45 0 20 100 404 484 3.39e-15 75.9
Msa0662820 AT4G13850.1 44.444 72 36 1 24 95 35 102 3.67e-15 71.6
Msa0662820 AT3G23830.2 41.026 78 45 1 24 100 35 112 4.22e-15 71.2
Msa0662820 AT3G23830.1 41.026 78 45 1 24 100 35 112 4.22e-15 71.2
Msa0662820 AT4G39260.3 43.421 76 42 1 25 99 7 82 4.56e-15 69.7
Msa0662820 AT4G14300.1 41.250 80 46 1 20 99 2 80 5.50e-15 74.7
Msa0662820 AT4G14300.2 41.250 80 46 1 20 99 2 80 5.50e-15 74.7
Msa0662820 AT2G22100.1 44.156 77 43 0 20 96 159 235 6.52e-15 74.3
Msa0662820 AT4G39260.1 43.421 76 42 1 25 99 7 82 7.18e-15 71.2
Msa0662820 AT1G17640.2 44.444 72 39 1 25 96 67 137 9.58e-15 73.9
Msa0662820 AT1G17640.1 44.444 72 39 1 25 96 67 137 9.58e-15 73.9
Msa0662820 AT1G17640.3 44.444 72 39 1 25 96 67 137 9.58e-15 73.9
Msa0662820 AT4G39260.4 50.943 53 26 0 25 77 7 59 2.06e-14 68.2
Msa0662820 AT2G21660.2 42.105 76 43 1 25 99 9 84 2.62e-14 69.3
Msa0662820 AT2G33410.1 41.333 75 43 1 25 99 7 80 2.84e-14 72.8
Msa0662820 AT2G21660.1 42.105 76 43 1 25 99 9 84 3.72e-14 69.3
Msa0662820 AT5G61030.2 43.478 69 35 1 24 92 40 104 2.24e-13 69.3
Msa0662820 AT5G61030.1 43.478 69 35 1 24 92 40 104 2.24e-13 69.3
Msa0662820 AT1G74230.1 41.558 77 45 0 24 100 34 110 2.32e-13 69.3
Msa0662820 AT1G18630.1 39.785 93 49 3 5 92 15 105 4.21e-13 66.2
Msa0662820 AT3G26420.1 45.614 57 31 0 25 81 8 64 4.68e-13 67.8
Msa0662820 AT5G59865.1 51.020 49 24 0 24 72 26 74 1.84e-11 60.5
Msa0662820 AT1G58470.2 39.189 74 41 1 25 94 7 80 2.71e-11 63.5
Msa0662820 AT1G58470.1 39.189 74 41 1 25 94 7 80 2.71e-11 63.5
Msa0662820 AT1G22910.4 33.065 124 45 3 70 171 8 115 5.10e-11 61.2

Find 113 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCCTTCTGTTGGAGCTTC+TGG 0.055135 4_4:+660296 Msa0662820:CDS
CATAGTAAGGGTACAGATTT+TGG 0.182431 4_4:-660334 None:intergenic
TAACCCTCCAACAAATATTT+TGG 0.186878 4_4:-658885 None:intergenic
GCTGAGGCAAAACTGGAATT+TGG 0.187376 4_4:-660415 None:intergenic
AACTGGAATTTGGGTCATTT+GGG 0.205081 4_4:-660405 None:intergenic
TCATTCTCTCATATTGTCTT+TGG 0.218377 4_4:+658737 Msa0662820:five_prime_UTR
TCTAATTGACCAATCAATAA+AGG 0.228559 4_4:-661370 None:intergenic
TATTTATCTGACAGATATTC+TGG 0.249082 4_4:+659844 Msa0662820:intron
AGTATCCATGGTCATGGTTT+TGG 0.271120 4_4:+660371 Msa0662820:CDS
AGCTTCTGGGGCAATGGGTT+TGG 0.272297 4_4:+660310 Msa0662820:CDS
AATGATTTCCTTTCTGTTAA+GGG 0.282979 4_4:+658528 Msa0662820:five_prime_UTR
CCAAAATGCTGAGGCAAAAC+TGG 0.286123 4_4:-660422 None:intergenic
AAACTGGAATTTGGGTCATT+TGG 0.293455 4_4:-660406 None:intergenic
CATGCTCTTATAGCTGCTTC+TGG 0.298266 4_4:-659166 None:intergenic
TAATGATTTCCTTTCTGTTA+AGG 0.312203 4_4:+658527 Msa0662820:five_prime_UTR
ACATTTCCTTATTCAGCATA+TGG 0.317744 4_4:+659720 Msa0662820:CDS
ATCCTTCTGTTGGAGCTTCT+GGG 0.321902 4_4:+660297 Msa0662820:CDS
AGTTACCCATATGCTGAATA+AGG 0.331681 4_4:-659726 None:intergenic
GTTATCACTGATAAGTATAC+TGG 0.334320 4_4:+658977 Msa0662820:CDS
TGTTGGAGCTTCTGGGGCAA+TGG 0.334769 4_4:+660304 Msa0662820:CDS
GCTCTTCTTCCATCAATAAC+TGG 0.337494 4_4:-659202 None:intergenic
TCAACTATTGATTATGTCTT+GGG 0.337812 4_4:+661263 Msa0662820:three_prime_UTR
CAGAACTATTACAATGTCTA+TGG 0.345598 4_4:+660251 Msa0662820:intron
TTGAGCTTCGGTAGCTCAAT+AGG 0.349937 4_4:+661402 Msa0662820:three_prime_UTR
GAATCTAATTATTTAAGCTT+TGG 0.354613 4_4:+661220 Msa0662820:three_prime_UTR
CTAATTGACCAATCAATAAA+GGG 0.356198 4_4:-661369 None:intergenic
TCTTTGAACCCTTTATTGAT+TGG 0.357423 4_4:+661361 Msa0662820:three_prime_UTR
AGAATTATTACCAGCACTAA+TGG 0.360267 4_4:-660489 None:intergenic
TAATTGAAAAGAAAATATTA+AGG 0.361503 4_4:+661493 Msa0662820:three_prime_UTR
TACCAATGTTGTGGAATCTT+AGG 0.371330 4_4:+658551 Msa0662820:five_prime_UTR
GTTGGAGCTTCTGGGGCAAT+GGG 0.372650 4_4:+660305 Msa0662820:CDS
AATGGTGTGCAGGAAGGTTT+AGG 0.381511 4_4:+659619 Msa0662820:intron
ACTGGGAGATCTAAAGGTTA+TGG 0.382688 4_4:+658995 Msa0662820:CDS
CAAAATCTGTACCCTTACTA+TGG 0.391859 4_4:+660335 Msa0662820:CDS
AATAGTTGAATTACTCTAGA+AGG 0.392515 4_4:-661249 None:intergenic
AAAGAACATTGCTTGGTTGA+TGG 0.392785 4_4:-658443 None:intergenic
CTGAGGCAAAACTGGAATTT+GGG 0.394905 4_4:-660414 None:intergenic
TTCAACTATTGATTATGTCT+TGG 0.400574 4_4:+661262 Msa0662820:three_prime_UTR
TAAATGTTGTGTCATTATAT+TGG 0.402817 4_4:-658862 None:intergenic
ACATTTACCAAAATATTTGT+TGG 0.412578 4_4:+658878 Msa0662820:CDS
AATCCATCTCCAGTTATTGA+TGG 0.412922 4_4:+659193 Msa0662820:CDS
ACAAAGGACTATTATGTCAT+TGG 0.417513 4_4:-661298 None:intergenic
TATTTGTTGGAGGGTTAGCT+TGG 0.423354 4_4:+658891 Msa0662820:CDS
AAGAACATTGCTTGGTTGAT+GGG 0.431421 4_4:-658442 None:intergenic
TATTACCAGCACTAATGGTT+GGG 0.433671 4_4:-660484 None:intergenic
TGTGCATATTGACCATAGTA+AGG 0.433964 4_4:-660347 None:intergenic
CATTTCCTTATTCAGCATAT+GGG 0.440818 4_4:+659721 Msa0662820:CDS
TGTACTGCCTAGTGGGTTGA+TGG 0.442879 4_4:-659698 None:intergenic
ATGAATTGAGAATGTTGTTA+AGG 0.444795 4_4:-661078 None:intergenic
TTGTTACCACTCACCATATG+AGG 0.446616 4_4:-658833 None:intergenic
ATTTGTTGGAGGGTTAGCTT+GGG 0.450733 4_4:+658892 Msa0662820:CDS
TCAACAAAGACAACCTCATA+TGG 0.453555 4_4:+658820 Msa0662820:CDS
TACTACAAAAGAACATTGCT+TGG 0.459545 4_4:-658450 None:intergenic
GTACCATCAGTTCCTTATCA+TGG 0.464112 4_4:+659657 Msa0662820:CDS
AGAAAGTAAAAGTTGAGCTT+CGG 0.469248 4_4:+661390 Msa0662820:three_prime_UTR
TCACCTTACTATCCTTCTGT+TGG 0.471067 4_4:+660287 Msa0662820:CDS
ATTGAGAATGTTGTTAAGGT+TGG 0.472361 4_4:-661074 None:intergenic
GCTCCAACAGAAGGATAGTA+AGG 0.482209 4_4:-660290 None:intergenic
AAGTATACTGGGAGATCTAA+AGG 0.490906 4_4:+658989 Msa0662820:CDS
CTTCCATCAATAACTGGAGA+TGG 0.499114 4_4:-659196 None:intergenic
GCTGGTCCTTCACAAACCTC+TGG 0.505996 4_4:+660988 Msa0662820:CDS
ATTGATTATGTCTTGGGTGT+TGG 0.508098 4_4:+661269 Msa0662820:three_prime_UTR
AATTGCAATATTGCTTCACT+TGG 0.510571 4_4:+659226 Msa0662820:CDS
GATCATATTCATTCATGCAT+AGG 0.512136 4_4:+661194 Msa0662820:three_prime_UTR
TGTTAAGGGTACCAATGTTG+TGG 0.513695 4_4:+658542 Msa0662820:five_prime_UTR
ATCATATTCATTCATGCATA+GGG 0.513955 4_4:+661195 Msa0662820:three_prime_UTR
TTATTACCAGCACTAATGGT+TGG 0.519138 4_4:-660485 None:intergenic
CCAGCCCTTGTTACTGCCAC+AGG 0.522193 4_4:-660970 None:intergenic
TTTACCAAAATATTTGTTGG+AGG 0.522261 4_4:+658881 Msa0662820:CDS
TCCTTCTGTTGGAGCTTCTG+GGG 0.522825 4_4:+660298 Msa0662820:CDS
TGTTGTGGAATCTTAGGAAG+AGG 0.530625 4_4:+658557 Msa0662820:five_prime_UTR
CAGCACCTGTGGCAGTAACA+AGG 0.532377 4_4:+660965 Msa0662820:CDS
AACATTCTACATCTTGATCA+TGG 0.532848 4_4:+661028 Msa0662820:exon
GGTTAGCTTGGGAAACTCAA+AGG 0.538530 4_4:+658903 Msa0662820:CDS
AGGAAATGTGTACTGCCTAG+TGG 0.539088 4_4:-659706 None:intergenic
TGCTGCTATTGTAGTAGTTG+TGG 0.540042 4_4:-660947 None:intergenic
TTGTTCAGTATCTGTTCCAG+AGG 0.543034 4_4:-661004 None:intergenic
GTGGATGAAGAACCATGATA+AGG 0.546300 4_4:-659669 None:intergenic
TTACCAAAATATTTGTTGGA+GGG 0.548943 4_4:+658882 Msa0662820:CDS
GTTGGGATTGCAACTGAAGA+AGG 0.551412 4_4:-660467 None:intergenic
CAATATGCACAAAGTATCCA+TGG 0.551625 4_4:+660359 Msa0662820:CDS
CCTGTGGCAGTAACAAGGGC+TGG 0.554680 4_4:+660970 Msa0662820:CDS
GCAATCCCAACCATTAGTGC+TGG 0.558559 4_4:+660479 Msa0662820:CDS
TTCCTAAGATTCCACAACAT+TGG 0.559486 4_4:-658553 None:intergenic
CTGGAATTTGGGTCATTTGG+GGG 0.562855 4_4:-660403 None:intergenic
CATTGGTACCCTTAACAGAA+AGG 0.564116 4_4:-658536 None:intergenic
TATGATGATCATGGTGATGA+TGG 0.570484 4_4:-661116 None:intergenic
GCCCCAGAAGCTCCAACAGA+AGG 0.575329 4_4:-660299 None:intergenic
ATTACTGTCAAAGCAATGAA+AGG 0.581388 4_4:-658508 None:intergenic
GCACAAAGTATCCATGGTCA+TGG 0.581950 4_4:+660365 Msa0662820:CDS
GAACCATGATAAGGAACTGA+TGG 0.583714 4_4:-659660 None:intergenic
ACTGGAATTTGGGTCATTTG+GGG 0.588666 4_4:-660404 None:intergenic
GTTAGCTTGGGAAACTCAAA+GGG 0.597037 4_4:+658904 Msa0662820:CDS
AGAACATTGCTTGGTTGATG+GGG 0.597775 4_4:-658441 None:intergenic
GTGCATATTGACCATAGTAA+GGG 0.598572 4_4:-660346 None:intergenic
AGCACCTGTGGCAGTAACAA+GGG 0.600833 4_4:+660966 Msa0662820:CDS
TACTACAATAGCAGCACCTG+TGG 0.605257 4_4:+660954 Msa0662820:CDS
ATGGTGTCTTACAAGTTACA+AGG 0.617235 4_4:+661047 Msa0662820:three_prime_UTR
TTATCACTGATAAGTATACT+GGG 0.624818 4_4:+658978 Msa0662820:CDS
TCTGTTCCAGAGGTTTGTGA+AGG 0.625089 4_4:-660994 None:intergenic
ATGTACTAAAATATAAACAA+AGG 0.631120 4_4:-661314 None:intergenic
CGATCACTAACTCTTCAGCA+TGG 0.635608 4_4:+659262 Msa0662820:CDS
GAACTCCAAAACCATGACCA+TGG 0.639031 4_4:-660376 None:intergenic
GGAAGGTTTAGGCCTCCACA+TGG 0.645450 4_4:+659630 Msa0662820:intron
GGAAATGTGTACTGCCTAGT+GGG 0.657310 4_4:-659705 None:intergenic
AGACAACCTCATATGGTGAG+TGG 0.661054 4_4:+658827 Msa0662820:CDS
CCTTGTGACCCAAAATGCTG+AGG 0.666097 4_4:-660431 None:intergenic
GTTTAGGCCTCCACATGGAG+TGG 0.666440 4_4:+659635 Msa0662820:CDS
GATGGTACCACTCCATGTGG+AGG 0.680340 4_4:-659642 None:intergenic
GAACATTGCTTGGTTGATGG+GGG 0.683662 4_4:-658440 None:intergenic
ACTGATGGTACCACTCCATG+TGG 0.705430 4_4:-659645 None:intergenic
ACAAGACACATTGTATCCTG+CGG 0.715658 4_4:+659873 Msa0662820:CDS
AGTGGGTTGATGGAAAACTG+TGG 0.742505 4_4:-659688 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAAAAAAAAAAAAA+AGG - chr4_4:659371-659390 None:intergenic 0.0%
!!! TTTTTTTTTTTAAAAAAAAA+AGG + chr4_4:659373-659392 Msa0662820:intron 0.0%
!!! AATTTTTTTTTTGTTTTTGT+AGG + chr4_4:659129-659148 Msa0662820:intron 10.0%
!!! TATGTTTTATAAGATTTTAA+AGG + chr4_4:659587-659606 Msa0662820:intron 10.0%
!!! TTTTTTTTTTAAATAGATCT+AGG + chr4_4:661168-661187 Msa0662820:three_prime_UTR 10.0%
!!! TTTTTTTTTAAATAGATCTA+GGG + chr4_4:661169-661188 Msa0662820:three_prime_UTR 10.0%
!! TAATTGAAAAGAAAATATTA+AGG + chr4_4:661493-661512 Msa0662820:three_prime_UTR 10.0%
!!! AGAATTTATTTTGAACAATT+TGG + chr4_4:658935-658954 Msa0662820:CDS 15.0%
!! AAATATAAGGAAAAGAAAAA+TGG - chr4_4:659031-659050 None:intergenic 15.0%
!! AGCATAGTAAAATAAATATA+AGG - chr4_4:659044-659063 None:intergenic 15.0%
!! GTAGTTTCTTTAATAAAAAA+AGG - chr4_4:659484-659503 None:intergenic 15.0%
!!! TTTTAAAGGAAAAATTGAAA+TGG + chr4_4:659601-659620 Msa0662820:intron 15.0%
!! TTTGGATTAATAGTAAAAAT+CGG + chr4_4:659924-659943 Msa0662820:intron 15.0%
!! ATTAATTTAGTATCAAAACT+AGG + chr4_4:660597-660616 Msa0662820:intron 15.0%
!!! ATCATCATAAGTTTTTTTTT+AGG + chr4_4:661130-661149 Msa0662820:three_prime_UTR 15.0%
!!! AAGTTTTTTTTTAGGAAAAT+AGG + chr4_4:661138-661157 Msa0662820:three_prime_UTR 15.0%
!! ATGTACTAAAATATAAACAA+AGG - chr4_4:661317-661336 None:intergenic 15.0%
!!! TTGTTTATATTTTAGTACAT+AGG + chr4_4:661317-661336 Msa0662820:three_prime_UTR 15.0%
!!! TGTTTATATTTTAGTACATA+GGG + chr4_4:661318-661337 Msa0662820:three_prime_UTR 15.0%
!!! TATTTTTTTCTTCTAAAGAT+AGG + chr4_4:661468-661487 Msa0662820:three_prime_UTR 15.0%
!!! CATAAATATTTTCATCAAGA+AGG + chr4_4:658473-658492 Msa0662820:five_prime_UTR 20.0%
!!! TAAATGTTGTGTCATTATAT+TGG - chr4_4:658865-658884 None:intergenic 20.0%
!! ACATTTACCAAAATATTTGT+TGG + chr4_4:658878-658897 Msa0662820:CDS 20.0%
!! AAGAAAGAAATAAAAGAGAA+TGG - chr4_4:659302-659321 None:intergenic 20.0%
!!! GGTATATTGTGTTATTTATT+TGG + chr4_4:659394-659413 Msa0662820:intron 20.0%
!! GTTTCTTTAATAAAAAAAGG+TGG - chr4_4:659481-659500 None:intergenic 20.0%
!! AAATAATCAACCATAAAAAG+TGG - chr4_4:659506-659525 None:intergenic 20.0%
!! AAATTAATCACATACATGTT+TGG - chr4_4:660048-660067 None:intergenic 20.0%
!! AAAAAAACTTATGATGATCA+TGG - chr4_4:661128-661147 None:intergenic 20.0%
!! GAATCTAATTATTTAAGCTT+TGG + chr4_4:661220-661239 Msa0662820:three_prime_UTR 20.0%
! TAATGATTTCCTTTCTGTTA+AGG + chr4_4:658527-658546 Msa0662820:five_prime_UTR 25.0%
! AATGATTTCCTTTCTGTTAA+GGG + chr4_4:658528-658547 Msa0662820:five_prime_UTR 25.0%
! ATGAAGAGTGAAAAAGAAAA+GGG - chr4_4:658721-658740 None:intergenic 25.0%
! AATGAAGAGTGAAAAAGAAA+AGG - chr4_4:658722-658741 None:intergenic 25.0%
!! TTTACCAAAATATTTGTTGG+AGG + chr4_4:658881-658900 Msa0662820:CDS 25.0%
!! TTACCAAAATATTTGTTGGA+GGG + chr4_4:658882-658901 Msa0662820:CDS 25.0%
! TTATCACTGATAAGTATACT+GGG + chr4_4:658978-658997 Msa0662820:CDS 25.0%
! AAATAAAAGAGAATGGTAGA+AGG - chr4_4:659295-659314 None:intergenic 25.0%
!!! AAAGAAACTACCACTTTTTA+TGG + chr4_4:659493-659512 Msa0662820:intron 25.0%
! TATTTATCTGACAGATATTC+TGG + chr4_4:659844-659863 Msa0662820:intron 25.0%
! TGTAATAAATTCCACATGTT+TGG + chr4_4:659906-659925 Msa0662820:intron 25.0%
! TTACTATTAATCCAAACATG+TGG - chr4_4:659920-659939 None:intergenic 25.0%
! TGAGCAATTCTATTTCAAAA+TGG + chr4_4:660560-660579 Msa0662820:intron 25.0%
! TTCATTATGTATTCGTTGTA+AGG + chr4_4:660680-660699 Msa0662820:intron 25.0%
!!! TCATATTAGTCTTTTCAAGT+GGG - chr4_4:660768-660787 None:intergenic 25.0%
!!! ATCATATTAGTCTTTTCAAG+TGG - chr4_4:660769-660788 None:intergenic 25.0%
! ATGAATTGAGAATGTTGTTA+AGG - chr4_4:661081-661100 None:intergenic 25.0%
! ATCATATTCATTCATGCATA+GGG + chr4_4:661195-661214 Msa0662820:three_prime_UTR 25.0%
! AATAGTTGAATTACTCTAGA+AGG - chr4_4:661252-661271 None:intergenic 25.0%
!! TTCAACTATTGATTATGTCT+TGG + chr4_4:661262-661281 Msa0662820:three_prime_UTR 25.0%
!! TCAACTATTGATTATGTCTT+GGG + chr4_4:661263-661282 Msa0662820:three_prime_UTR 25.0%
! CTAATTGACCAATCAATAAA+GGG - chr4_4:661372-661391 None:intergenic 25.0%
! TCTAATTGACCAATCAATAA+AGG - chr4_4:661373-661392 None:intergenic 25.0%
TACTACAAAAGAACATTGCT+TGG - chr4_4:658453-658472 None:intergenic 30.0%
ATTACTGTCAAAGCAATGAA+AGG - chr4_4:658511-658530 None:intergenic 30.0%
TCATTCTCTCATATTGTCTT+TGG + chr4_4:658737-658756 Msa0662820:five_prime_UTR 30.0%
! TAACCCTCCAACAAATATTT+TGG - chr4_4:658888-658907 None:intergenic 30.0%
GTTATCACTGATAAGTATAC+TGG + chr4_4:658977-658996 Msa0662820:CDS 30.0%
! GTTTTTGTAGGTGACATTTA+AGG + chr4_4:659141-659160 Msa0662820:intron 30.0%
AATTGCAATATTGCTTCACT+TGG + chr4_4:659226-659245 Msa0662820:CDS 30.0%
! CAAATTGATAGGTTGAACAA+TGG - chr4_4:659436-659455 None:intergenic 30.0%
CTAGGATGAATCAAATTGAT+AGG - chr4_4:659447-659466 None:intergenic 30.0%
CTATCAATTTGATTCATCCT+AGG + chr4_4:659445-659464 Msa0662820:intron 30.0%
ACATTTCCTTATTCAGCATA+TGG + chr4_4:659720-659739 Msa0662820:CDS 30.0%
CATTTCCTTATTCAGCATAT+GGG + chr4_4:659721-659740 Msa0662820:CDS 30.0%
TAGAATTGCCATCAAAGAAA+AGG - chr4_4:659821-659840 None:intergenic 30.0%
! ACAATGACACAGTAATTTTG+TGG + chr4_4:659954-659973 Msa0662820:intron 30.0%
CAGAACTATTACAATGTCTA+TGG + chr4_4:660251-660270 Msa0662820:intron 30.0%
AGAATTATTACCAGCACTAA+TGG - chr4_4:660492-660511 None:intergenic 30.0%
AACATTCTACATCTTGATCA+TGG + chr4_4:661028-661047 Msa0662820:exon 30.0%
ATTGAGAATGTTGTTAAGGT+TGG - chr4_4:661077-661096 None:intergenic 30.0%
GATCATATTCATTCATGCAT+AGG + chr4_4:661194-661213 Msa0662820:three_prime_UTR 30.0%
ACAAAGGACTATTATGTCAT+TGG - chr4_4:661301-661320 None:intergenic 30.0%
TCTTTGAACCCTTTATTGAT+TGG + chr4_4:661361-661380 Msa0662820:three_prime_UTR 30.0%
AGAAAGTAAAAGTTGAGCTT+CGG + chr4_4:661390-661409 Msa0662820:three_prime_UTR 30.0%
AAGAACATTGCTTGGTTGAT+GGG - chr4_4:658445-658464 None:intergenic 35.0%
AAAGAACATTGCTTGGTTGA+TGG - chr4_4:658446-658465 None:intergenic 35.0%
TACCAATGTTGTGGAATCTT+AGG + chr4_4:658551-658570 Msa0662820:five_prime_UTR 35.0%
TTCCTAAGATTCCACAACAT+TGG - chr4_4:658556-658575 None:intergenic 35.0%
TCAACAAAGACAACCTCATA+TGG + chr4_4:658820-658839 Msa0662820:CDS 35.0%
AAGTATACTGGGAGATCTAA+AGG + chr4_4:658989-659008 Msa0662820:CDS 35.0%
AATCCATCTCCAGTTATTGA+TGG + chr4_4:659193-659212 Msa0662820:CDS 35.0%
GAAAAATTGAAATGGTGTGC+AGG + chr4_4:659609-659628 Msa0662820:intron 35.0%
AGTTACCCATATGCTGAATA+AGG - chr4_4:659729-659748 None:intergenic 35.0%
! TTGTCTGTCCTTTTCTTTGA+TGG + chr4_4:659810-659829 Msa0662820:intron 35.0%
CACATACATGTTTGGATTGA+CGG - chr4_4:660040-660059 None:intergenic 35.0%
AGAATCATAGTATGTCACAG+AGG + chr4_4:660117-660136 Msa0662820:intron 35.0%
!! CATAGTAAGGGTACAGATTT+TGG - chr4_4:660337-660356 None:intergenic 35.0%
CAAAATCTGTACCCTTACTA+TGG + chr4_4:660335-660354 Msa0662820:CDS 35.0%
GTGCATATTGACCATAGTAA+GGG - chr4_4:660349-660368 None:intergenic 35.0%
TGTGCATATTGACCATAGTA+AGG - chr4_4:660350-660369 None:intergenic 35.0%
! CAATATGCACAAAGTATCCA+TGG + chr4_4:660359-660378 Msa0662820:CDS 35.0%
AACTGGAATTTGGGTCATTT+GGG - chr4_4:660408-660427 None:intergenic 35.0%
AAACTGGAATTTGGGTCATT+TGG - chr4_4:660409-660428 None:intergenic 35.0%
TATTACCAGCACTAATGGTT+GGG - chr4_4:660487-660506 None:intergenic 35.0%
TTATTACCAGCACTAATGGT+TGG - chr4_4:660488-660507 None:intergenic 35.0%
ATGGTGTCTTACAAGTTACA+AGG + chr4_4:661047-661066 Msa0662820:three_prime_UTR 35.0%
! TATGATGATCATGGTGATGA+TGG - chr4_4:661119-661138 None:intergenic 35.0%
ATTGATTATGTCTTGGGTGT+TGG + chr4_4:661269-661288 Msa0662820:three_prime_UTR 35.0%
! AGAACATTGCTTGGTTGATG+GGG - chr4_4:658444-658463 None:intergenic 40.0%
CATTGGTACCCTTAACAGAA+AGG - chr4_4:658539-658558 None:intergenic 40.0%
!! TGTTAAGGGTACCAATGTTG+TGG + chr4_4:658542-658561 Msa0662820:five_prime_UTR 40.0%
TGTTGTGGAATCTTAGGAAG+AGG + chr4_4:658557-658576 Msa0662820:five_prime_UTR 40.0%
TTGTTACCACTCACCATATG+AGG - chr4_4:658836-658855 None:intergenic 40.0%
!! TATTTGTTGGAGGGTTAGCT+TGG + chr4_4:658891-658910 Msa0662820:CDS 40.0%
!! ATTTGTTGGAGGGTTAGCTT+GGG + chr4_4:658892-658911 Msa0662820:CDS 40.0%
! GTTAGCTTGGGAAACTCAAA+GGG + chr4_4:658904-658923 Msa0662820:CDS 40.0%
ACTGGGAGATCTAAAGGTTA+TGG + chr4_4:658995-659014 Msa0662820:CDS 40.0%
CTTCCATCAATAACTGGAGA+TGG - chr4_4:659199-659218 None:intergenic 40.0%
GCTCTTCTTCCATCAATAAC+TGG - chr4_4:659205-659224 None:intergenic 40.0%
! TGATAGGTTGAACAATGGCA+GGG - chr4_4:659431-659450 None:intergenic 40.0%
! TTGATAGGTTGAACAATGGC+AGG - chr4_4:659432-659451 None:intergenic 40.0%
AATTGAAATGGTGTGCAGGA+AGG + chr4_4:659613-659632 Msa0662820:intron 40.0%
GTACCATCAGTTCCTTATCA+TGG + chr4_4:659657-659676 Msa0662820:CDS 40.0%
GAACCATGATAAGGAACTGA+TGG - chr4_4:659663-659682 None:intergenic 40.0%
GTGGATGAAGAACCATGATA+AGG - chr4_4:659672-659691 None:intergenic 40.0%
ACAAGACACATTGTATCCTG+CGG + chr4_4:659873-659892 Msa0662820:CDS 40.0%
ATTACATCAACACTTACCGC+AGG - chr4_4:659892-659911 None:intergenic 40.0%
AGTGACTCCAAACATACACT+TGG + chr4_4:660154-660173 Msa0662820:intron 40.0%
ACTTCGACCAAGTGTATGTT+TGG - chr4_4:660164-660183 None:intergenic 40.0%
TCACCTTACTATCCTTCTGT+TGG + chr4_4:660287-660306 Msa0662820:CDS 40.0%
! AGTATCCATGGTCATGGTTT+TGG + chr4_4:660371-660390 Msa0662820:CDS 40.0%
ACTGGAATTTGGGTCATTTG+GGG - chr4_4:660407-660426 None:intergenic 40.0%
CTGAGGCAAAACTGGAATTT+GGG - chr4_4:660417-660436 None:intergenic 40.0%
! CAGTTTTGCCTCAGCATTTT+GGG + chr4_4:660423-660442 Msa0662820:CDS 40.0%
TGCTGCTATTGTAGTAGTTG+TGG - chr4_4:660950-660969 None:intergenic 40.0%
TTGTTCAGTATCTGTTCCAG+AGG - chr4_4:661007-661026 None:intergenic 40.0%
AGACAACCTCATATGGTGAG+TGG + chr4_4:658827-658846 Msa0662820:CDS 45.0%
!! GGTTAGCTTGGGAAACTCAA+AGG + chr4_4:658903-658922 Msa0662820:CDS 45.0%
CATGCTCTTATAGCTGCTTC+TGG - chr4_4:659169-659188 None:intergenic 45.0%
CGATCACTAACTCTTCAGCA+TGG + chr4_4:659262-659281 Msa0662820:CDS 45.0%
! AAGGTGGTAGCTTTTAGCCT+AGG - chr4_4:659465-659484 None:intergenic 45.0%
AATGGTGTGCAGGAAGGTTT+AGG + chr4_4:659619-659638 Msa0662820:intron 45.0%
!! AGTGGGTTGATGGAAAACTG+TGG - chr4_4:659691-659710 None:intergenic 45.0%
! CAGTTTTCCATCAACCCACT+AGG + chr4_4:659691-659710 Msa0662820:CDS 45.0%
GGAAATGTGTACTGCCTAGT+GGG - chr4_4:659708-659727 None:intergenic 45.0%
AGGAAATGTGTACTGCCTAG+TGG - chr4_4:659709-659728 None:intergenic 45.0%
GCTCCAACAGAAGGATAGTA+AGG - chr4_4:660293-660312 None:intergenic 45.0%
TATCCTTCTGTTGGAGCTTC+TGG + chr4_4:660296-660315 Msa0662820:CDS 45.0%
ATCCTTCTGTTGGAGCTTCT+GGG + chr4_4:660297-660316 Msa0662820:CDS 45.0%
! GCACAAAGTATCCATGGTCA+TGG + chr4_4:660365-660384 Msa0662820:CDS 45.0%
GAACTCCAAAACCATGACCA+TGG - chr4_4:660379-660398 None:intergenic 45.0%
CTGGAATTTGGGTCATTTGG+GGG - chr4_4:660406-660425 None:intergenic 45.0%
GCTGAGGCAAAACTGGAATT+TGG - chr4_4:660418-660437 None:intergenic 45.0%
CCAAAATGCTGAGGCAAAAC+TGG - chr4_4:660425-660444 None:intergenic 45.0%
! CCAGTTTTGCCTCAGCATTT+TGG + chr4_4:660422-660441 Msa0662820:CDS 45.0%
GTTGGGATTGCAACTGAAGA+AGG - chr4_4:660470-660489 None:intergenic 45.0%
TACTACAATAGCAGCACCTG+TGG + chr4_4:660954-660973 Msa0662820:CDS 45.0%
TCTGTTCCAGAGGTTTGTGA+AGG - chr4_4:660997-661016 None:intergenic 45.0%
TTGAGCTTCGGTAGCTCAAT+AGG + chr4_4:661402-661421 Msa0662820:three_prime_UTR 45.0%
!!! TTTATTTACTATTTTTTTTT+TGG + chr4_4:659523-659542 Msa0662820:intron 5.0%
ACTGATGGTACCACTCCATG+TGG - chr4_4:659648-659667 None:intergenic 50.0%
!! TGTACTGCCTAGTGGGTTGA+TGG - chr4_4:659701-659720 None:intergenic 50.0%
TCCTTCTGTTGGAGCTTCTG+GGG + chr4_4:660298-660317 Msa0662820:CDS 50.0%
CCTTGTGACCCAAAATGCTG+AGG - chr4_4:660434-660453 None:intergenic 50.0%
!! CCTCAGCATTTTGGGTCACA+AGG + chr4_4:660431-660450 Msa0662820:CDS 50.0%
GCAATCCCAACCATTAGTGC+TGG + chr4_4:660479-660498 Msa0662820:CDS 50.0%
AGCACCTGTGGCAGTAACAA+GGG + chr4_4:660966-660985 Msa0662820:CDS 50.0%
GGAAGGTTTAGGCCTCCACA+TGG + chr4_4:659630-659649 Msa0662820:intron 55.0%
GTTTAGGCCTCCACATGGAG+TGG + chr4_4:659635-659654 Msa0662820:CDS 55.0%
GATGGTACCACTCCATGTGG+AGG - chr4_4:659645-659664 None:intergenic 55.0%
!! TGTTGGAGCTTCTGGGGCAA+TGG + chr4_4:660304-660323 Msa0662820:CDS 55.0%
!! GTTGGAGCTTCTGGGGCAAT+GGG + chr4_4:660305-660324 Msa0662820:CDS 55.0%
!! AGCTTCTGGGGCAATGGGTT+TGG + chr4_4:660310-660329 Msa0662820:CDS 55.0%
CAGCACCTGTGGCAGTAACA+AGG + chr4_4:660965-660984 Msa0662820:CDS 55.0%
GCTGGTCCTTCACAAACCTC+TGG + chr4_4:660988-661007 Msa0662820:CDS 55.0%
GCCCCAGAAGCTCCAACAGA+AGG - chr4_4:660302-660321 None:intergenic 60.0%
CCAGCCCTTGTTACTGCCAC+AGG - chr4_4:660973-660992 None:intergenic 60.0%
CCTGTGGCAGTAACAAGGGC+TGG + chr4_4:660970-660989 Msa0662820:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 658441 661557 658441 ID=Msa0662820;Name=Msa0662820
chr4_4 mRNA 658441 661557 658441 ID=Msa0662820-mRNA-1;Parent=Msa0662820;Name=Msa0662820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=374|1|1|1|1|1|6|513|282
chr4_4 exon 658441 659021 658441 ID=Msa0662820-mRNA-1:exon:287;Parent=Msa0662820-mRNA-1
chr4_4 exon 659151 659283 659151 ID=Msa0662820-mRNA-1:exon:288;Parent=Msa0662820-mRNA-1
chr4_4 exon 659631 659742 659631 ID=Msa0662820-mRNA-1:exon:289;Parent=Msa0662820-mRNA-1
chr4_4 exon 659858 659894 659858 ID=Msa0662820-mRNA-1:exon:290;Parent=Msa0662820-mRNA-1
chr4_4 exon 660254 660500 660254 ID=Msa0662820-mRNA-1:exon:291;Parent=Msa0662820-mRNA-1
chr4_4 exon 660932 661557 660932 ID=Msa0662820-mRNA-1:exon:292;Parent=Msa0662820-mRNA-1
chr4_4 five_prime_UTR 658441 658814 658441 ID=Msa0662820-mRNA-1:five_prime_utr;Parent=Msa0662820-mRNA-1
chr4_4 CDS 658815 659021 658815 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 CDS 659151 659283 659151 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 CDS 659631 659742 659631 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 CDS 659858 659894 659858 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 CDS 660254 660500 660254 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 CDS 660932 661044 660932 ID=Msa0662820-mRNA-1:cds;Parent=Msa0662820-mRNA-1
chr4_4 three_prime_UTR 661045 661557 661045 ID=Msa0662820-mRNA-1:three_prime_utr;Parent=Msa0662820-mRNA-1
Gene Sequence

>Msa0662820

ATGTCTCAACAAAGACAACCTCATATGGTGAGTGGTAACAATCAAGACCAATATAATGACACAACATTTACCAAAATATTTGTTGGAGGGTTAGCTTGGGAAACTCAAAGGGAAACAATGAGAATTTATTTTGAACAATTTGGAGAGATCTTAGAAGCTGTTGTTATCACTGATAAGTATACTGGGAGATCTAAAGGTTATGGTTTTGTGACATTTAAGGATCCAGAAGCAGCTATAAGAGCATGTCAAAATCCATCTCCAGTTATTGATGGAAGAAGAGCAAATTGCAATATTGCTTCACTTGGTGCTAACAAGAATCGATCACTAACTCTTCAGCATGGAAGGTTTAGGCCTCCACATGGAGTGGTACCATCAGTTCCTTATCATGGTTCTTCATCCACAGTTTTCCATCAACCCACTAGGCAGTACACATTTCCTTATTCAGCATATGGATATTCTGGATATTCACAAGACACATTGTATCCTGCGAACTATTACAATGTCTATGGAGTTCAACAATATTCACCTTACTATCCTTCTGTTGGAGCTTCTGGGGCAATGGGTTTGGTCCAAAATCTGTACCCTTACTATGGTCAATATGCACAAAGTATCCATGGTCATGGTTTTGGAGTTCAATACCCCCAAATGACCCAAATTCCAGTTTTGCCTCAGCATTTTGGGTCACAAGGAATATTGACTCTTCCTTCTTCAGTTGCAATCCCAACCATTAGTGCTGCAACAGTAACTGCAACCACAACTACTACAATAGCAGCACCTGTGGCAGTAACAAGGGCTGGTCCTTCACAAACCTCTGGAACAGATACTGAACAACAACATTCTACATCTTGA
Protein sequence

>Msa0662820

MSQQRQPHMVSGNNQDQYNDTTFTKIFVGGLAWETQRETMRIYFEQFGEILEAVVITDKYTGRSKGYGFVTFKDPEAAIRACQNPSPVIDGRRANCNIASLGANKNRSLTLQHGRFRPPHGVVPSVPYHGSSSTVFHQPTRQYTFPYSAYGYSGYSQDTLYPANYYNVYGVQQYSPYYPSVGASGAMGLVQNLYPYYGQYAQSIHGHGFGVQYPQMTQIPVLPQHFGSQGILTLPSSVAIPTISAATVTATTTTTIAAPVAVTRAGPSQTSGTDTEQQHSTS*