AlfalfaGEDB | Msa1375000

M. sativa cultivar zhongmu-4 / Msa1375000

KEGG: K17808
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006457 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006950 GO:0006986 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0009987 GO:0010033 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0030150 GO:0031647 GO:0031974 GO:0033036 GO:0033365 GO:0034613 GO:0035966 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0050821 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0065007 GO:0065008 GO:0070013 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:1990542
PFAM: PF05180.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1375000	XP_013470361.1	93.671	237	8	3	1	236	1	231	1.19e-157	446

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1375000	A0A072VR01	93.671	237	8	3	1	236	1	231	5.70e-158	446

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001800	Msa1375000	-0.802829	4.658119e-49	-8.615850e-47
Msa0009530	Msa1375000	0.802510	5.420856e-49	-8.615850e-47
Msa0037680	Msa1375000	-0.809901	1.504448e-50	-8.615850e-47
Msa0044530	Msa1375000	0.829349	5.411412e-55	-8.615850e-47
Msa0044780	Msa1375000	0.886114	4.533493e-72	-8.615850e-47
Msa0045810	Msa1375000	-0.805129	1.549768e-49	-8.615850e-47
Msa0046970	Msa1375000	-0.815552	8.722059e-52	-8.615850e-47
Msa0072390	Msa1375000	0.805034	1.621768e-49	-8.615850e-47
Msa0086620	Msa1375000	0.814263	1.684256e-51	-8.615850e-47
Msa0091090	Msa1375000	0.817244	3.646417e-52	-8.615850e-47
Msa0091220	Msa1375000	0.824466	7.951283e-54	-8.615850e-47
Msa0091240	Msa1375000	0.822998	1.754284e-53	-8.615850e-47
Msa1347390	Msa1375000	-0.817773	2.770917e-52	-8.615850e-47
Msa1352630	Msa1375000	0.832837	7.524789e-56	-8.615850e-47
Msa1368390	Msa1375000	-0.821553	3.798872e-53	-8.615850e-47
Msa1375000	Msa1414780	0.806231	9.093765e-50	-8.615850e-47
Msa1375000	Msa1436620	-0.888374	6.250015e-73	-8.615850e-47
Msa1375000	Msa1450630	0.814148	1.785325e-51	-8.615850e-47
Msa1375000	Msa1452790	0.816197	6.259611e-52	-8.615850e-47
Msa1375000	Msa1457770	-0.804637	1.963457e-49	-8.615850e-47
Msa0608820	Msa1375000	-0.825541	4.430751e-54	-8.615850e-47
Msa0610700	Msa1375000	0.839077	1.966231e-57	-8.615850e-47
Msa0659020	Msa1375000	0.832642	8.413179e-56	-8.615850e-47
Msa0662820	Msa1375000	-0.818760	1.656492e-52	-8.615850e-47
Msa0689830	Msa1375000	-0.811863	5.658869e-51	-8.615850e-47
Msa0691610	Msa1375000	-0.821975	3.034242e-53	-8.615850e-47
Msa0701090	Msa1375000	0.814532	1.468319e-51	-8.615850e-47
Msa0719270	Msa1375000	-0.874678	5.598237e-68	-8.615850e-47
Msa0726170	Msa1375000	0.858550	7.626230e-63	-8.615850e-47
Msa0732970	Msa1375000	-0.814945	1.189327e-51	-8.615850e-47
Msa0742090	Msa1375000	0.810041	1.403504e-50	-8.615850e-47
Msa0745140	Msa1375000	-0.858700	6.881607e-63	-8.615850e-47
Msa0746650	Msa1375000	-0.821584	3.735766e-53	-8.615850e-47
Msa0758780	Msa1375000	0.822172	2.730350e-53	-8.615850e-47
Msa0758810	Msa1375000	0.830339	3.105792e-55	-8.615850e-47
Msa0772220	Msa1375000	-0.830258	3.250494e-55	-8.615850e-47
Msa0773960	Msa1375000	-0.814352	1.609345e-51	-8.615850e-47
Msa0775660	Msa1375000	-0.838864	2.232004e-57	-8.615850e-47
Msa0776640	Msa1375000	-0.858022	1.095596e-62	-8.615850e-47
Msa0823310	Msa1375000	0.816188	6.290018e-52	-8.615850e-47
Msa0825920	Msa1375000	-0.853154	2.881829e-61	-8.615850e-47
Msa0838620	Msa1375000	0.862030	6.760727e-64	-8.615850e-47
Msa0838670	Msa1375000	0.827254	1.731517e-54	-8.615850e-47
Msa0840520	Msa1375000	-0.890593	8.562428e-74	-8.615850e-47
Msa0136180	Msa1375000	0.814555	1.451456e-51	-8.615850e-47
Msa0137010	Msa1375000	0.806438	8.226469e-50	-8.615850e-47
Msa0139500	Msa1375000	-0.800138	1.658700e-48	-8.615850e-47
Msa0203080	Msa1375000	-0.823396	1.416439e-53	-8.615850e-47
Msa0204950	Msa1375000	-0.824685	7.060483e-54	-8.615850e-47
Msa0226450	Msa1375000	0.847431	1.161800e-59	-8.615850e-47
Msa0229750	Msa1375000	0.812592	3.924206e-51	-8.615850e-47
Msa1266120	Msa1375000	0.811018	8.632868e-51	-8.615850e-47
Msa1286860	Msa1375000	0.806774	6.988119e-50	-8.615850e-47
Msa1294280	Msa1375000	-0.829465	5.071667e-55	-8.615850e-47
Msa1295210	Msa1375000	0.813705	2.235607e-51	-8.615850e-47
Msa1297220	Msa1375000	0.804403	2.197218e-49	-8.615850e-47
Msa1299740	Msa1375000	0.802579	5.247263e-49	-8.615850e-47
Msa1317240	Msa1375000	0.808103	3.649812e-50	-8.615850e-47
Msa1323260	Msa1375000	0.806678	7.318979e-50	-8.615850e-47
Msa1328630	Msa1375000	0.802704	4.945509e-49	-8.615850e-47
Msa1328720	Msa1375000	0.800114	1.677438e-48	-8.615850e-47
Msa1343450	Msa1375000	0.809738	1.631537e-50	-8.615850e-47
Msa0371350	Msa1375000	0.820045	8.437635e-53	-8.615850e-47
Msa0386880	Msa1375000	-0.829000	6.575401e-55	-8.615850e-47
Msa0387740	Msa1375000	0.817301	3.540912e-52	-8.615850e-47
Msa0402770	Msa1375000	-0.822118	2.810455e-53	-8.615850e-47
Msa0419420	Msa1375000	0.803609	3.212057e-49	-8.615850e-47
Msa0428330	Msa1375000	0.832053	1.177380e-55	-8.615850e-47
Msa0437480	Msa1375000	-0.817122	3.883403e-52	-8.615850e-47
Msa0438680	Msa1375000	0.819364	1.207619e-52	-8.615850e-47
Msa0440350	Msa1375000	-0.824817	6.572343e-54	-8.615850e-47
Msa0467170	Msa1375000	-0.834001	3.856628e-56	-8.615850e-47
Msa0467330	Msa1375000	-0.843029	1.800815e-58	-8.615850e-47
Msa0477900	Msa1375000	-0.808845	2.535601e-50	-8.615850e-47
Msa0982730	Msa1375000	-0.823477	1.356294e-53	-8.615850e-47
Msa1031180	Msa1375000	-0.814182	1.754499e-51	-8.615850e-47
Msa1044250	Msa1375000	-0.808720	2.696210e-50	-8.615850e-47
Msa1070360	Msa1375000	-0.806075	9.808758e-50	-8.615850e-47
Msa1088740	Msa1375000	0.807701	4.444700e-50	-8.615850e-47
Msa1101610	Msa1375000	0.820883	5.421610e-53	-8.615850e-47
Msa1101980	Msa1375000	0.801152	1.030387e-48	-8.615850e-47
Msa1102060	Msa1375000	0.810390	1.180474e-50	-8.615850e-47
Msa0246210	Msa1375000	-0.801135	1.038486e-48	-8.615850e-47
Msa0267450	Msa1375000	0.811021	8.622027e-51	-8.615850e-47
Msa0267510	Msa1375000	0.811950	5.416002e-51	-8.615850e-47
Msa0276850	Msa1375000	-0.808590	2.873768e-50	-8.615850e-47
Msa0276860	Msa1375000	-0.824845	6.473289e-54	-8.615850e-47
Msa0320600	Msa1375000	-0.825095	5.648846e-54	-8.615850e-47
Msa0341060	Msa1375000	0.849021	4.224180e-60	-8.615850e-47
Msa0354840	Msa1375000	-0.830227	3.306857e-55	-8.615850e-47
Msa1118770	Msa1375000	0.840858	6.751534e-58	-8.615850e-47
Msa1119430	Msa1375000	-0.817534	3.137953e-52	-8.615850e-47
Msa1133440	Msa1375000	0.803668	3.122965e-49	-8.615850e-47
Msa1149910	Msa1375000	-0.808326	3.271878e-50	-8.615850e-47
Msa1158200	Msa1375000	-0.815675	8.187439e-52	-8.615850e-47
Msa1165460	Msa1375000	-0.821489	3.930254e-53	-8.615850e-47
Msa1190350	Msa1375000	0.816327	5.855187e-52	-8.615850e-47
Msa1201170	Msa1375000	-0.819996	8.661732e-53	-8.615850e-47
Msa1205270	Msa1375000	0.807105	5.945343e-50	-8.615850e-47
Msa1217890	Msa1375000	-0.803221	3.865588e-49	-8.615850e-47
Msa0484210	Msa1375000	0.861244	1.175298e-63	-8.615850e-47
Msa0555280	Msa1375000	-0.816177	6.324864e-52	-8.615850e-47
Msa0568460	Msa1375000	0.840744	7.229704e-58	-8.615850e-47
Msa0574900	Msa1375000	-0.830284	3.201877e-55	-8.615850e-47
Msa0575380	Msa1375000	-0.802691	4.975193e-49	-8.615850e-47
Msa0579070	Msa1375000	0.847292	1.268151e-59	-8.615850e-47
Msa0848670	Msa1375000	0.823536	1.313740e-53	-8.615850e-47
Msa0865420	Msa1375000	-0.847740	9.553940e-60	-8.615850e-47
Msa0930770	Msa1375000	-0.828375	9.310037e-55	-8.615850e-47
Msa0945030	Msa1375000	-0.842066	3.243334e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1375000	MtrunA17_Chr1g0211411	93.671	237	8	3	1	236	1	231	1.10e-161	446
Msa1375000	MtrunA17_Chr4g0023841	55.556	54	24	0	145	198	89	142	1.45e-15	71.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1375000	AT5G27280.1	55.959	193	61	4	48	235	39	212	6.21e-65	201
Msa1375000	AT1G68730.1	55.000	60	27	0	139	198	96	155	3.34e-16	73.9

Find 69 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATCACTTGAACTTGTTTC+AGG	0.209481	tig0019615:+162905	Msa1375000:CDS
ATGAGTGAATTGCCAGCTTA+TGG	0.279283	tig0019615:+163043	Msa1375000:exon
CTTCATCTTGTGAGATGGTT+AGG	0.294170	tig0019615:+163288	Msa1375000:three_prime_UTR
TCCTTGCCAACCGCAGGAAC+AGG	0.295164	tig0019615:-161912	None:intergenic
CTGCCTCTGATCATCATATA+AGG	0.303523	tig0019615:+163078	Msa1375000:three_prime_UTR
AGAGGATGGACAACAGGTTC+TGG	0.304476	tig0019615:+161876	Msa1375000:CDS
GTTGGCAAGGATGGCCAATC+TGG	0.320238	tig0019615:+161924	Msa1375000:CDS
TACATTGGAAAGAGGGGAAA+TGG	0.383769	tig0019615:-161694	None:intergenic
TGGCAATTCACTCATGTAAC+GGG	0.396746	tig0019615:-163035	None:intergenic
CCCTGTTCCTGCGGTTGGCA+AGG	0.408452	tig0019615:+161911	Msa1375000:CDS
GTTCCTGCGGTTGGCAAGGA+TGG	0.417208	tig0019615:+161915	Msa1375000:CDS
TGATCTCAAGTTCAGGTTCA+TGG	0.426042	tig0019615:+162980	Msa1375000:CDS
TCAGGATGCGGCGATGGGAC+TGG	0.430291	tig0019615:+161833	Msa1375000:intron
AGCGATGAGCATCCTTCGCC+TGG	0.430343	tig0019615:-161994	None:intergenic
AAGGTTGAAGTTGAGTTCGT+TGG	0.430732	tig0019615:-161643	None:intergenic
CTTCTCTTCATCTTGTGAGA+TGG	0.447042	tig0019615:+163283	Msa1375000:three_prime_UTR
GATGGGATGATCTCAAGTTC+AGG	0.447144	tig0019615:+162973	Msa1375000:CDS
AAACAGCGATTAGTGGGAAC+TGG	0.455375	tig0019615:-161669	None:intergenic
TGTATTGTTGTGATTGTGTT+GGG	0.458586	tig0019615:+161261	None:intergenic
TCTTGTTGAAGAAGGGAAGA+TGG	0.460295	tig0019615:-161409	None:intergenic
AAAATATATGCTCCATAAGC+TGG	0.465894	tig0019615:-163055	None:intergenic
GTGGGATCAGGATGCGGCGA+TGG	0.473920	tig0019615:+161827	Msa1375000:intron
GAGGATGGACAACAGGTTCT+GGG	0.476565	tig0019615:+161877	Msa1375000:CDS
ACAGGTAGAGGATGGACAAC+AGG	0.485934	tig0019615:+161870	Msa1375000:CDS
AGTAGTTCGCTGGCCACAAA+TGG	0.495726	tig0019615:-162027	None:intergenic
CCTTGCCAACCGCAGGAACA+GGG	0.513142	tig0019615:-161911	None:intergenic
TTGGCAAGGATGGCCAATCT+GGG	0.515495	tig0019615:+161925	Msa1375000:CDS
CTGGTGTTGAGTGCAGCAAC+AGG	0.517261	tig0019615:+161852	Msa1375000:CDS
TTGAGTGCAGCAACAGGTAG+AGG	0.519099	tig0019615:+161858	Msa1375000:CDS
GATGATGTTCTTGTTGAAGA+AGG	0.523407	tig0019615:-161417	None:intergenic
TGGGATCAGGATGCGGCGAT+GGG	0.524036	tig0019615:+161828	Msa1375000:intron
AGAGGGTAGACGAAAGTGGA+AGG	0.528636	tig0019615:-161481	None:intergenic
GTGTATTGTTGTGATTGTGT+TGG	0.531693	tig0019615:+161260	None:intergenic
TGGCCATCCTTGCCAACCGC+AGG	0.536828	tig0019615:-161918	None:intergenic
AATCCTCATGCTTACACTGA+TGG	0.541011	tig0019615:+162059	Msa1375000:CDS
AATGGAGAAACAGCGATTAG+TGG	0.545981	tig0019615:-161676	None:intergenic
TAGAAGAGGGTAGACGAAAG+TGG	0.546563	tig0019615:-161485	None:intergenic
AAATATTGTCAGTCCCAGAT+TGG	0.547211	tig0019615:-161938	None:intergenic
GATTAGTGGGAACTGGAGAA+AGG	0.549189	tig0019615:-161662	None:intergenic
GAAGGGAAGATGGAGAAAGA+AGG	0.549957	tig0019615:-161399	None:intergenic
CACTCTTCACTAAATCTCCC+AGG	0.555459	tig0019615:+161976	Msa1375000:CDS
TTAAGTATAAAGGTCCTGGA+TGG	0.555752	tig0019615:+162955	Msa1375000:CDS
GAGAATCAATCTGATGATGA+TGG	0.556875	tig0019615:+161338	Msa1375000:exon
ATGATGTTCTTGTTGAAGAA+GGG	0.560562	tig0019615:-161416	None:intergenic
CTGGCAATTCACTCATGTAA+CGG	0.562439	tig0019615:-163036	None:intergenic
TCACTAAATCTCCCAGGCGA+AGG	0.574635	tig0019615:+161982	Msa1375000:CDS
GAAGAGTGACCATGGGAAAG+TGG	0.574914	tig0019615:-161961	None:intergenic
AACTTGAGATCATCCCATCC+AGG	0.575509	tig0019615:-162969	None:intergenic
TAAGTATAAAGGTCCTGGAT+GGG	0.576355	tig0019615:+162956	Msa1375000:CDS
ACAATATTTCCACTTTCCCA+TGG	0.577693	tig0019615:+161952	Msa1375000:CDS
ACATTACATACATTGGAAAG+AGG	0.577849	tig0019615:-161702	None:intergenic
CATTACATACATTGGAAAGA+GGG	0.582616	tig0019615:-161701	None:intergenic
ATGGAGAAACAGCGATTAGT+GGG	0.587217	tig0019615:-161675	None:intergenic
TTGCCAACCGCAGGAACAGG+GGG	0.596232	tig0019615:-161909	None:intergenic
CTTGCCAACCGCAGGAACAG+GGG	0.600917	tig0019615:-161910	None:intergenic
GTGCAGCAACAGGTAGAGGA+TGG	0.602472	tig0019615:+161862	Msa1375000:CDS
ATTTAGTGAAGAGTGACCAT+GGG	0.605907	tig0019615:-161968	None:intergenic
GATTTAGTGAAGAGTGACCA+TGG	0.607466	tig0019615:-161969	None:intergenic
ATGGACAACAGGTTCTGGGA+TGG	0.609246	tig0019615:+161881	Msa1375000:CDS
ACAACAGGTTCTGGGATGGA+AGG	0.611576	tig0019615:+161885	Msa1375000:CDS
TAATAGCGCGAGTAGTTCGC+TGG	0.613634	tig0019615:-162037	None:intergenic
AGAATACGGACGCTTAGAAG+AGG	0.614308	tig0019615:-161499	None:intergenic
CAATGCGTATCATAAGCTTG+TGG	0.615319	tig0019615:+162884	Msa1375000:CDS
GAATACGGACGCTTAGAAGA+GGG	0.616215	tig0019615:-161498	None:intergenic
ATTACATACATTGGAAAGAG+GGG	0.621264	tig0019615:-161700	None:intergenic
GCGATGAGCATCCTTCGCCT+GGG	0.627050	tig0019615:-161993	None:intergenic
ATTCCTTATATGATGATCAG+AGG	0.628474	tig0019615:-163081	None:intergenic
GTGCCATCAGTGTAAGCATG+AGG	0.652803	tig0019615:-162062	None:intergenic
GGCAATTCACTCATGTAACG+GGG	0.702863	tig0019615:-163034	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAATAGTAAAATTAATGA+TGG	-	tig0019615:161563-161582	None:intergenic	10.0%
!!!	TATTATTTTTTTTTCATTTC+AGG	+	tig0019615:161576-161595	Msa1375000:intron	10.0%
!!	AATAATAGTAAAATTAATGA+TGG	-	tig0019615:161563-161582	None:intergenic	10.0%
!!!	TATTATTTTTTTTTCATTTC+AGG	+	tig0019615:161576-161595	Msa1375000:intron	10.0%
!!	ATATAAAAATAGGGAAATTA+GGG	-	tig0019615:161738-161757	None:intergenic	15.0%
!!	TAAATTCTGATTATAATTTG+TGG	+	tig0019615:161808-161827	Msa1375000:intron	15.0%
!!!	AAATTCTGATTATAATTTGT+GGG	+	tig0019615:161809-161828	Msa1375000:intron	15.0%
!!	GATCATGTTTAAATTATAAA+TGG	-	tig0019615:162341-162360	None:intergenic	15.0%
!!	TTATAATTTAAACATGATCT+TGG	+	tig0019615:162342-162361	Msa1375000:intron	15.0%
!!!	AATTCAAGTTTTAAGTATAA+AGG	+	tig0019615:162945-162964	Msa1375000:CDS	15.0%
!!	ATATAAAAATAGGGAAATTA+GGG	-	tig0019615:161738-161757	None:intergenic	15.0%
!!	TAAATTCTGATTATAATTTG+TGG	+	tig0019615:161808-161827	Msa1375000:intron	15.0%
!!!	AAATTCTGATTATAATTTGT+GGG	+	tig0019615:161809-161828	Msa1375000:intron	15.0%
!!	GATCATGTTTAAATTATAAA+TGG	-	tig0019615:162341-162360	None:intergenic	15.0%
!!	TTATAATTTAAACATGATCT+TGG	+	tig0019615:162342-162361	Msa1375000:intron	15.0%
!!!	AATTCAAGTTTTAAGTATAA+AGG	+	tig0019615:162945-162964	Msa1375000:CDS	15.0%
!!	CATATAAAAATAGGGAAATT+AGG	-	tig0019615:161739-161758	None:intergenic	20.0%
!!	ATCCATCACATATAAAAATA+GGG	-	tig0019615:161747-161766	None:intergenic	20.0%
!!	ATTATTTATGTGAATTGTCA+TGG	+	tig0019615:162235-162254	Msa1375000:intron	20.0%
!!	AAAAATTTCATTGCAAGAAA+GGG	+	tig0019615:162740-162759	Msa1375000:intron	20.0%
!!	CATATAAAAATAGGGAAATT+AGG	-	tig0019615:161739-161758	None:intergenic	20.0%
!!	ATCCATCACATATAAAAATA+GGG	-	tig0019615:161747-161766	None:intergenic	20.0%
!!	ATTATTTATGTGAATTGTCA+TGG	+	tig0019615:162235-162254	Msa1375000:intron	20.0%
!!	AAAAATTTCATTGCAAGAAA+GGG	+	tig0019615:162740-162759	Msa1375000:intron	20.0%
!!!	TTCCCTATTTTTATATGTGA+TGG	+	tig0019615:161742-161761	Msa1375000:intron	25.0%
!	CATCCATCACATATAAAAAT+AGG	-	tig0019615:161748-161767	None:intergenic	25.0%
!!!	TGTTTTTGTTCAGGTAATAA+TGG	+	tig0019615:162085-162104	Msa1375000:intron	25.0%
!!	TCAGGTAATAATGGTTTTTA+AGG	+	tig0019615:162094-162113	Msa1375000:intron	25.0%
!!!	ATAATGGTTTTTAAGGAAGT+AGG	+	tig0019615:162101-162120	Msa1375000:intron	25.0%
!	TAAATTATAAATGGCATGTC+CGG	-	tig0019615:162332-162351	None:intergenic	25.0%
!!	TGAAGGTTTTTAAATTCAAC+CGG	-	tig0019615:162682-162701	None:intergenic	25.0%
!	GAAAAATTTCATTGCAAGAA+AGG	+	tig0019615:162739-162758	Msa1375000:intron	25.0%
!	TGCTTAATAGTAAAAATGTC+AGG	+	tig0019615:163141-163160	Msa1375000:three_prime_UTR	25.0%
!	GCTTAATAGTAAAAATGTCA+GGG	+	tig0019615:163142-163161	Msa1375000:three_prime_UTR	25.0%
!	CTTAATAGTAAAAATGTCAG+GGG	+	tig0019615:163143-163162	Msa1375000:three_prime_UTR	25.0%
!	TAAAAATATCCCAACACAAT+CGG	-	tig0019615:161273-161292	None:intergenic	25.0%
!!!	TTCCCTATTTTTATATGTGA+TGG	+	tig0019615:161742-161761	Msa1375000:intron	25.0%
!	CATCCATCACATATAAAAAT+AGG	-	tig0019615:161748-161767	None:intergenic	25.0%
!!!	TGTTTTTGTTCAGGTAATAA+TGG	+	tig0019615:162085-162104	Msa1375000:intron	25.0%
!!	TCAGGTAATAATGGTTTTTA+AGG	+	tig0019615:162094-162113	Msa1375000:intron	25.0%
!!!	ATAATGGTTTTTAAGGAAGT+AGG	+	tig0019615:162101-162120	Msa1375000:intron	25.0%
!	TAAATTATAAATGGCATGTC+CGG	-	tig0019615:162332-162351	None:intergenic	25.0%
!!	TGAAGGTTTTTAAATTCAAC+CGG	-	tig0019615:162682-162701	None:intergenic	25.0%
!	GAAAAATTTCATTGCAAGAA+AGG	+	tig0019615:162739-162758	Msa1375000:intron	25.0%
!	TGCTTAATAGTAAAAATGTC+AGG	+	tig0019615:163141-163160	Msa1375000:three_prime_UTR	25.0%
!	GCTTAATAGTAAAAATGTCA+GGG	+	tig0019615:163142-163161	Msa1375000:three_prime_UTR	25.0%
!	CTTAATAGTAAAAATGTCAG+GGG	+	tig0019615:163143-163162	Msa1375000:three_prime_UTR	25.0%
!!!	TTGTGTTGGGATATTTTTAG+AGG	+	tig0019615:161274-161293	Msa1375000:five_prime_UTR	30.0%
!!!	ATATTTTTAGAGGTGAAGAG+AGG	+	tig0019615:161284-161303	Msa1375000:five_prime_UTR	30.0%
	ATGATGTTCTTGTTGAAGAA+GGG	-	tig0019615:161419-161438	None:intergenic	30.0%
	ATTACATACATTGGAAAGAG+GGG	-	tig0019615:161703-161722	None:intergenic	30.0%
	CATTACATACATTGGAAAGA+GGG	-	tig0019615:161704-161723	None:intergenic	30.0%
	ACATTACATACATTGGAAAG+AGG	-	tig0019615:161705-161724	None:intergenic	30.0%
	GAGAGAAACATTACATACAT+TGG	-	tig0019615:161712-161731	None:intergenic	30.0%
!	TGATTATAATTTGTGGGATC+AGG	+	tig0019615:161815-161834	Msa1375000:intron	30.0%
!	ATTTTACCGTTTGAGAGTTT+TGG	-	tig0019615:162171-162190	None:intergenic	30.0%
	CTGATAGTTGTCATGAATAA+GGG	+	tig0019615:162301-162320	Msa1375000:intron	30.0%
	TGATAGTTGTCATGAATAAG+GGG	+	tig0019615:162302-162321	Msa1375000:intron	30.0%
	AGTTAAGTTTCAAACTCCAA+TGG	-	tig0019615:162381-162400	None:intergenic	30.0%
	ATGTCATGTCCAATTTCTAA+TGG	+	tig0019615:162798-162817	Msa1375000:intron	30.0%
	CAATGGGAAACACAAAAATA+TGG	-	tig0019615:162846-162865	None:intergenic	30.0%
!	ATTTTTGTGTTTCCCATTGT+TGG	+	tig0019615:162847-162866	Msa1375000:intron	30.0%
!!!	AGTTTTAAGTATAAAGGTCC+TGG	+	tig0019615:162951-162970	Msa1375000:CDS	30.0%
	AAAATATATGCTCCATAAGC+TGG	-	tig0019615:163058-163077	None:intergenic	30.0%
	ATTCCTTATATGATGATCAG+AGG	-	tig0019615:163084-163103	None:intergenic	30.0%
!!!	TTGTGTTGGGATATTTTTAG+AGG	+	tig0019615:161274-161293	Msa1375000:five_prime_UTR	30.0%
!!!	ATATTTTTAGAGGTGAAGAG+AGG	+	tig0019615:161284-161303	Msa1375000:five_prime_UTR	30.0%
	ATGATGTTCTTGTTGAAGAA+GGG	-	tig0019615:161419-161438	None:intergenic	30.0%
	ATTACATACATTGGAAAGAG+GGG	-	tig0019615:161703-161722	None:intergenic	30.0%
	CATTACATACATTGGAAAGA+GGG	-	tig0019615:161704-161723	None:intergenic	30.0%
	ACATTACATACATTGGAAAG+AGG	-	tig0019615:161705-161724	None:intergenic	30.0%
	GAGAGAAACATTACATACAT+TGG	-	tig0019615:161712-161731	None:intergenic	30.0%
!	TGATTATAATTTGTGGGATC+AGG	+	tig0019615:161815-161834	Msa1375000:intron	30.0%
!	ATTTTACCGTTTGAGAGTTT+TGG	-	tig0019615:162171-162190	None:intergenic	30.0%
	CTGATAGTTGTCATGAATAA+GGG	+	tig0019615:162301-162320	Msa1375000:intron	30.0%
	TGATAGTTGTCATGAATAAG+GGG	+	tig0019615:162302-162321	Msa1375000:intron	30.0%
	AGTTAAGTTTCAAACTCCAA+TGG	-	tig0019615:162381-162400	None:intergenic	30.0%
	ATGTCATGTCCAATTTCTAA+TGG	+	tig0019615:162798-162817	Msa1375000:intron	30.0%
	CAATGGGAAACACAAAAATA+TGG	-	tig0019615:162846-162865	None:intergenic	30.0%
!	ATTTTTGTGTTTCCCATTGT+TGG	+	tig0019615:162847-162866	Msa1375000:intron	30.0%
!!!	AGTTTTAAGTATAAAGGTCC+TGG	+	tig0019615:162951-162970	Msa1375000:CDS	30.0%
	AAAATATATGCTCCATAAGC+TGG	-	tig0019615:163058-163077	None:intergenic	30.0%
	ATTCCTTATATGATGATCAG+AGG	-	tig0019615:163084-163103	None:intergenic	30.0%
!	GAGAATCAATCTGATGATGA+TGG	+	tig0019615:161338-161357	Msa1375000:exon	35.0%
	GATGATGTTCTTGTTGAAGA+AGG	-	tig0019615:161420-161439	None:intergenic	35.0%
	GATTGATCGAGAAGAGAATA+CGG	-	tig0019615:161516-161535	None:intergenic	35.0%
!!	TTTTTCATTTCAGGTGACGA+TGG	+	tig0019615:161585-161604	Msa1375000:intron	35.0%
	AAATATTGTCAGTCCCAGAT+TGG	-	tig0019615:161941-161960	None:intergenic	35.0%
	ACAATATTTCCACTTTCCCA+TGG	+	tig0019615:161952-161971	Msa1375000:CDS	35.0%
	ATTTAGTGAAGAGTGACCAT+GGG	-	tig0019615:161971-161990	None:intergenic	35.0%
!	GCTTTTACTTGTACCATTTG+TGG	+	tig0019615:162014-162033	Msa1375000:CDS	35.0%
	TGCAACATTCGTAACAAGTT+TGG	-	tig0019615:162138-162157	None:intergenic	35.0%
	ATCTGACCAAAACTCTCAAA+CGG	+	tig0019615:162162-162181	Msa1375000:intron	35.0%
	GCTGATAGTTGTCATGAATA+AGG	+	tig0019615:162300-162319	Msa1375000:intron	35.0%
	TGGAATAACAAGCTAACCAT+TGG	+	tig0019615:162362-162381	Msa1375000:intron	35.0%
	ATCAGCTTTCCTAATTCTCA+GGG	-	tig0019615:162454-162473	None:intergenic	35.0%
	TATCAGCTTTCCTAATTCTC+AGG	-	tig0019615:162455-162474	None:intergenic	35.0%
	TGAGAATTAGGAAAGCTGAT+AGG	+	tig0019615:162454-162473	Msa1375000:intron	35.0%
!	GTTTTTAAATTCAACCGGCA+GGG	-	tig0019615:162677-162696	None:intergenic	35.0%
	CATCAGTCTCCATTAGAAAT+TGG	-	tig0019615:162810-162829	None:intergenic	35.0%
	CAATTTCTAATGGAGACTGA+TGG	+	tig0019615:162808-162827	Msa1375000:intron	35.0%
	TTAAGTATAAAGGTCCTGGA+TGG	+	tig0019615:162955-162974	Msa1375000:CDS	35.0%
	TAAGTATAAAGGTCCTGGAT+GGG	+	tig0019615:162956-162975	Msa1375000:CDS	35.0%
!	GAGAATCAATCTGATGATGA+TGG	+	tig0019615:161338-161357	Msa1375000:exon	35.0%
	GATGATGTTCTTGTTGAAGA+AGG	-	tig0019615:161420-161439	None:intergenic	35.0%
	GATTGATCGAGAAGAGAATA+CGG	-	tig0019615:161516-161535	None:intergenic	35.0%
!!	TTTTTCATTTCAGGTGACGA+TGG	+	tig0019615:161585-161604	Msa1375000:intron	35.0%
	AAATATTGTCAGTCCCAGAT+TGG	-	tig0019615:161941-161960	None:intergenic	35.0%
	ACAATATTTCCACTTTCCCA+TGG	+	tig0019615:161952-161971	Msa1375000:CDS	35.0%
	ATTTAGTGAAGAGTGACCAT+GGG	-	tig0019615:161971-161990	None:intergenic	35.0%
!	GCTTTTACTTGTACCATTTG+TGG	+	tig0019615:162014-162033	Msa1375000:CDS	35.0%
	TGCAACATTCGTAACAAGTT+TGG	-	tig0019615:162138-162157	None:intergenic	35.0%
	ATCTGACCAAAACTCTCAAA+CGG	+	tig0019615:162162-162181	Msa1375000:intron	35.0%
	GCTGATAGTTGTCATGAATA+AGG	+	tig0019615:162300-162319	Msa1375000:intron	35.0%
	TGGAATAACAAGCTAACCAT+TGG	+	tig0019615:162362-162381	Msa1375000:intron	35.0%
	ATCAGCTTTCCTAATTCTCA+GGG	-	tig0019615:162454-162473	None:intergenic	35.0%
	TATCAGCTTTCCTAATTCTC+AGG	-	tig0019615:162455-162474	None:intergenic	35.0%
	TGAGAATTAGGAAAGCTGAT+AGG	+	tig0019615:162454-162473	Msa1375000:intron	35.0%
!	GTTTTTAAATTCAACCGGCA+GGG	-	tig0019615:162677-162696	None:intergenic	35.0%
	CATCAGTCTCCATTAGAAAT+TGG	-	tig0019615:162810-162829	None:intergenic	35.0%
	CAATTTCTAATGGAGACTGA+TGG	+	tig0019615:162808-162827	Msa1375000:intron	35.0%
	TTAAGTATAAAGGTCCTGGA+TGG	+	tig0019615:162955-162974	Msa1375000:CDS	35.0%
	TAAGTATAAAGGTCCTGGAT+GGG	+	tig0019615:162956-162975	Msa1375000:CDS	35.0%
!!	TTTTTAGAGGTGAAGAGAGG+AGG	+	tig0019615:161287-161306	Msa1375000:five_prime_UTR	40.0%
	TCTTGTTGAAGAAGGGAAGA+TGG	-	tig0019615:161412-161431	None:intergenic	40.0%
!	ACGAAAGTGGAAGGTTTTCT+TGG	-	tig0019615:161475-161494	None:intergenic	40.0%
	AAGGTTGAAGTTGAGTTCGT+TGG	-	tig0019615:161646-161665	None:intergenic	40.0%
	ATGGAGAAACAGCGATTAGT+GGG	-	tig0019615:161678-161697	None:intergenic	40.0%
	AATGGAGAAACAGCGATTAG+TGG	-	tig0019615:161679-161698	None:intergenic	40.0%
	TACATTGGAAAGAGGGGAAA+TGG	-	tig0019615:161697-161716	None:intergenic	40.0%
!	TAATTTGTGGGATCAGGATG+CGG	+	tig0019615:161821-161840	Msa1375000:intron	40.0%
	GATTTAGTGAAGAGTGACCA+TGG	-	tig0019615:161972-161991	None:intergenic	40.0%
	AATCCTCATGCTTACACTGA+TGG	+	tig0019615:162059-162078	Msa1375000:CDS	40.0%
!!!	TGATGGCACTGTTTTTGTTC+AGG	+	tig0019615:162076-162095	Msa1375000:CDS	40.0%
!	TGTCATGGATTGCATAAGAC+AGG	+	tig0019615:162250-162269	Msa1375000:intron	40.0%
	ACTCGAAGTCTAGCATCATA+TGG	-	tig0019615:162428-162447	None:intergenic	40.0%
	TATGATGCTAGACTTCGAGT+TGG	+	tig0019615:162428-162447	Msa1375000:intron	40.0%
	AAAATGTACTTCAACCCTGC+CGG	+	tig0019615:162660-162679	Msa1375000:intron	40.0%
!	GGTTTTTAAATTCAACCGGC+AGG	-	tig0019615:162678-162697	None:intergenic	40.0%
	AAAGACTGACGTCGATATTC+TGG	+	tig0019615:162713-162732	Msa1375000:intron	40.0%
	TTCACAACACTGCCAACAAT+GGG	-	tig0019615:162862-162881	None:intergenic	40.0%
	ATTCACAACACTGCCAACAA+TGG	-	tig0019615:162863-162882	None:intergenic	40.0%
	CAATGCGTATCATAAGCTTG+TGG	+	tig0019615:162884-162903	Msa1375000:CDS	40.0%
!	GGATCACTTGAACTTGTTTC+AGG	+	tig0019615:162905-162924	Msa1375000:CDS	40.0%
!	TGATCTCAAGTTCAGGTTCA+TGG	+	tig0019615:162980-162999	Msa1375000:CDS	40.0%
	TGGCAATTCACTCATGTAAC+GGG	-	tig0019615:163038-163057	None:intergenic	40.0%
	CTGGCAATTCACTCATGTAA+CGG	-	tig0019615:163039-163058	None:intergenic	40.0%
	ATGAGTGAATTGCCAGCTTA+TGG	+	tig0019615:163043-163062	Msa1375000:exon	40.0%
	CTGCCTCTGATCATCATATA+AGG	+	tig0019615:163078-163097	Msa1375000:three_prime_UTR	40.0%
	CTTCTCTTCATCTTGTGAGA+TGG	+	tig0019615:163283-163302	Msa1375000:three_prime_UTR	40.0%
	CTTCATCTTGTGAGATGGTT+AGG	+	tig0019615:163288-163307	Msa1375000:three_prime_UTR	40.0%
!!	TTTTTAGAGGTGAAGAGAGG+AGG	+	tig0019615:161287-161306	Msa1375000:five_prime_UTR	40.0%
	TCTTGTTGAAGAAGGGAAGA+TGG	-	tig0019615:161412-161431	None:intergenic	40.0%
!	ACGAAAGTGGAAGGTTTTCT+TGG	-	tig0019615:161475-161494	None:intergenic	40.0%
	AAGGTTGAAGTTGAGTTCGT+TGG	-	tig0019615:161646-161665	None:intergenic	40.0%
	ATGGAGAAACAGCGATTAGT+GGG	-	tig0019615:161678-161697	None:intergenic	40.0%
	AATGGAGAAACAGCGATTAG+TGG	-	tig0019615:161679-161698	None:intergenic	40.0%
	TACATTGGAAAGAGGGGAAA+TGG	-	tig0019615:161697-161716	None:intergenic	40.0%
!	TAATTTGTGGGATCAGGATG+CGG	+	tig0019615:161821-161840	Msa1375000:intron	40.0%
	GATTTAGTGAAGAGTGACCA+TGG	-	tig0019615:161972-161991	None:intergenic	40.0%
	AATCCTCATGCTTACACTGA+TGG	+	tig0019615:162059-162078	Msa1375000:CDS	40.0%
!!!	TGATGGCACTGTTTTTGTTC+AGG	+	tig0019615:162076-162095	Msa1375000:CDS	40.0%
!	TGTCATGGATTGCATAAGAC+AGG	+	tig0019615:162250-162269	Msa1375000:intron	40.0%
	ACTCGAAGTCTAGCATCATA+TGG	-	tig0019615:162428-162447	None:intergenic	40.0%
	TATGATGCTAGACTTCGAGT+TGG	+	tig0019615:162428-162447	Msa1375000:intron	40.0%
	AAAATGTACTTCAACCCTGC+CGG	+	tig0019615:162660-162679	Msa1375000:intron	40.0%
!	GGTTTTTAAATTCAACCGGC+AGG	-	tig0019615:162678-162697	None:intergenic	40.0%
	AAAGACTGACGTCGATATTC+TGG	+	tig0019615:162713-162732	Msa1375000:intron	40.0%
	TTCACAACACTGCCAACAAT+GGG	-	tig0019615:162862-162881	None:intergenic	40.0%
	ATTCACAACACTGCCAACAA+TGG	-	tig0019615:162863-162882	None:intergenic	40.0%
	CAATGCGTATCATAAGCTTG+TGG	+	tig0019615:162884-162903	Msa1375000:CDS	40.0%
!	GGATCACTTGAACTTGTTTC+AGG	+	tig0019615:162905-162924	Msa1375000:CDS	40.0%
!	TGATCTCAAGTTCAGGTTCA+TGG	+	tig0019615:162980-162999	Msa1375000:CDS	40.0%
	TGGCAATTCACTCATGTAAC+GGG	-	tig0019615:163038-163057	None:intergenic	40.0%
	CTGGCAATTCACTCATGTAA+CGG	-	tig0019615:163039-163058	None:intergenic	40.0%
	ATGAGTGAATTGCCAGCTTA+TGG	+	tig0019615:163043-163062	Msa1375000:exon	40.0%
	CTGCCTCTGATCATCATATA+AGG	+	tig0019615:163078-163097	Msa1375000:three_prime_UTR	40.0%
	CTTCTCTTCATCTTGTGAGA+TGG	+	tig0019615:163283-163302	Msa1375000:three_prime_UTR	40.0%
	CTTCATCTTGTGAGATGGTT+AGG	+	tig0019615:163288-163307	Msa1375000:three_prime_UTR	40.0%
	GAAGGGAAGATGGAGAAAGA+AGG	-	tig0019615:161402-161421	None:intergenic	45.0%
	TAGAAGAGGGTAGACGAAAG+TGG	-	tig0019615:161488-161507	None:intergenic	45.0%
	GAATACGGACGCTTAGAAGA+GGG	-	tig0019615:161501-161520	None:intergenic	45.0%
	AGAATACGGACGCTTAGAAG+AGG	-	tig0019615:161502-161521	None:intergenic	45.0%
	GATTAGTGGGAACTGGAGAA+AGG	-	tig0019615:161665-161684	None:intergenic	45.0%
	AAACAGCGATTAGTGGGAAC+TGG	-	tig0019615:161672-161691	None:intergenic	45.0%
	CACTCTTCACTAAATCTCCC+AGG	+	tig0019615:161976-161995	Msa1375000:CDS	45.0%
	GAACCAAACTTTGAGCAGCT+CGG	-	tig0019615:162214-162233	None:intergenic	45.0%
	GTCATGAATAAGGGGCAATC+CGG	+	tig0019615:162310-162329	Msa1375000:intron	45.0%
!!!	GTCTTTTAAGAGCGGGTTGA+AGG	-	tig0019615:162699-162718	None:intergenic	45.0%
!!	GACGTCAGTCTTTTAAGAGC+GGG	-	tig0019615:162706-162725	None:intergenic	45.0%
!!	CGACGTCAGTCTTTTAAGAG+CGG	-	tig0019615:162707-162726	None:intergenic	45.0%
	AACTTGAGATCATCCCATCC+AGG	-	tig0019615:162972-162991	None:intergenic	45.0%
	GATGGGATGATCTCAAGTTC+AGG	+	tig0019615:162973-162992	Msa1375000:CDS	45.0%
	GGCAATTCACTCATGTAACG+GGG	-	tig0019615:163037-163056	None:intergenic	45.0%
	GAAGGGAAGATGGAGAAAGA+AGG	-	tig0019615:161402-161421	None:intergenic	45.0%
	TAGAAGAGGGTAGACGAAAG+TGG	-	tig0019615:161488-161507	None:intergenic	45.0%
	GAATACGGACGCTTAGAAGA+GGG	-	tig0019615:161501-161520	None:intergenic	45.0%
	AGAATACGGACGCTTAGAAG+AGG	-	tig0019615:161502-161521	None:intergenic	45.0%
	GATTAGTGGGAACTGGAGAA+AGG	-	tig0019615:161665-161684	None:intergenic	45.0%
	AAACAGCGATTAGTGGGAAC+TGG	-	tig0019615:161672-161691	None:intergenic	45.0%
	CACTCTTCACTAAATCTCCC+AGG	+	tig0019615:161976-161995	Msa1375000:CDS	45.0%
	GAACCAAACTTTGAGCAGCT+CGG	-	tig0019615:162214-162233	None:intergenic	45.0%
	GTCATGAATAAGGGGCAATC+CGG	+	tig0019615:162310-162329	Msa1375000:intron	45.0%
!!!	GTCTTTTAAGAGCGGGTTGA+AGG	-	tig0019615:162699-162718	None:intergenic	45.0%
!!	GACGTCAGTCTTTTAAGAGC+GGG	-	tig0019615:162706-162725	None:intergenic	45.0%
!!	CGACGTCAGTCTTTTAAGAG+CGG	-	tig0019615:162707-162726	None:intergenic	45.0%
	AACTTGAGATCATCCCATCC+AGG	-	tig0019615:162972-162991	None:intergenic	45.0%
	GATGGGATGATCTCAAGTTC+AGG	+	tig0019615:162973-162992	Msa1375000:CDS	45.0%
	GGCAATTCACTCATGTAACG+GGG	-	tig0019615:163037-163056	None:intergenic	45.0%
!!!	AAAATTTTTTTTTTTTTTGA+AGG	+	tig0019615:162509-162528	Msa1375000:intron	5.0%
!!!	AAAATTTTTTTTTTTTTTGA+AGG	+	tig0019615:162509-162528	Msa1375000:intron	5.0%
	AGAGGGTAGACGAAAGTGGA+AGG	-	tig0019615:161484-161503	None:intergenic	50.0%
	TTGAGTGCAGCAACAGGTAG+AGG	+	tig0019615:161858-161877	Msa1375000:CDS	50.0%
	ACAGGTAGAGGATGGACAAC+AGG	+	tig0019615:161870-161889	Msa1375000:CDS	50.0%
	AGAGGATGGACAACAGGTTC+TGG	+	tig0019615:161876-161895	Msa1375000:CDS	50.0%
	GAGGATGGACAACAGGTTCT+GGG	+	tig0019615:161877-161896	Msa1375000:CDS	50.0%
!!	ATGGACAACAGGTTCTGGGA+TGG	+	tig0019615:161881-161900	Msa1375000:CDS	50.0%
!!	ACAACAGGTTCTGGGATGGA+AGG	+	tig0019615:161885-161904	Msa1375000:CDS	50.0%
	TTGGCAAGGATGGCCAATCT+GGG	+	tig0019615:161925-161944	Msa1375000:CDS	50.0%
	GAAGAGTGACCATGGGAAAG+TGG	-	tig0019615:161964-161983	None:intergenic	50.0%
	TCACTAAATCTCCCAGGCGA+AGG	+	tig0019615:161982-162001	Msa1375000:CDS	50.0%
	AGTAGTTCGCTGGCCACAAA+TGG	-	tig0019615:162030-162049	None:intergenic	50.0%
	TAATAGCGCGAGTAGTTCGC+TGG	-	tig0019615:162040-162059	None:intergenic	50.0%
	GTGCCATCAGTGTAAGCATG+AGG	-	tig0019615:162065-162084	None:intergenic	50.0%
	TAGCCGAGCTGCTCAAAGTT+TGG	+	tig0019615:162208-162227	Msa1375000:intron	50.0%
!!	TCGAGTTGGCCCTGAGAATT+AGG	+	tig0019615:162442-162461	Msa1375000:intron	50.0%
	AGAGGGTAGACGAAAGTGGA+AGG	-	tig0019615:161484-161503	None:intergenic	50.0%
	TTGAGTGCAGCAACAGGTAG+AGG	+	tig0019615:161858-161877	Msa1375000:CDS	50.0%
	ACAGGTAGAGGATGGACAAC+AGG	+	tig0019615:161870-161889	Msa1375000:CDS	50.0%
	AGAGGATGGACAACAGGTTC+TGG	+	tig0019615:161876-161895	Msa1375000:CDS	50.0%
	GAGGATGGACAACAGGTTCT+GGG	+	tig0019615:161877-161896	Msa1375000:CDS	50.0%
!!	ATGGACAACAGGTTCTGGGA+TGG	+	tig0019615:161881-161900	Msa1375000:CDS	50.0%
!!	ACAACAGGTTCTGGGATGGA+AGG	+	tig0019615:161885-161904	Msa1375000:CDS	50.0%
	TTGGCAAGGATGGCCAATCT+GGG	+	tig0019615:161925-161944	Msa1375000:CDS	50.0%
	GAAGAGTGACCATGGGAAAG+TGG	-	tig0019615:161964-161983	None:intergenic	50.0%
	TCACTAAATCTCCCAGGCGA+AGG	+	tig0019615:161982-162001	Msa1375000:CDS	50.0%
	AGTAGTTCGCTGGCCACAAA+TGG	-	tig0019615:162030-162049	None:intergenic	50.0%
	TAATAGCGCGAGTAGTTCGC+TGG	-	tig0019615:162040-162059	None:intergenic	50.0%
	GTGCCATCAGTGTAAGCATG+AGG	-	tig0019615:162065-162084	None:intergenic	50.0%
	TAGCCGAGCTGCTCAAAGTT+TGG	+	tig0019615:162208-162227	Msa1375000:intron	50.0%
!!	TCGAGTTGGCCCTGAGAATT+AGG	+	tig0019615:162442-162461	Msa1375000:intron	50.0%
!	CTGGTGTTGAGTGCAGCAAC+AGG	+	tig0019615:161852-161871	Msa1375000:CDS	55.0%
	GTGCAGCAACAGGTAGAGGA+TGG	+	tig0019615:161862-161881	Msa1375000:CDS	55.0%
	GTTGGCAAGGATGGCCAATC+TGG	+	tig0019615:161924-161943	Msa1375000:CDS	55.0%
!	CTGGTGTTGAGTGCAGCAAC+AGG	+	tig0019615:161852-161871	Msa1375000:CDS	55.0%
	GTGCAGCAACAGGTAGAGGA+TGG	+	tig0019615:161862-161881	Msa1375000:CDS	55.0%
	GTTGGCAAGGATGGCCAATC+TGG	+	tig0019615:161924-161943	Msa1375000:CDS	55.0%
	TGGGATCAGGATGCGGCGAT+GGG	+	tig0019615:161828-161847	Msa1375000:intron	60.0%
	TTGCCAACCGCAGGAACAGG+GGG	-	tig0019615:161912-161931	None:intergenic	60.0%
	CTTGCCAACCGCAGGAACAG+GGG	-	tig0019615:161913-161932	None:intergenic	60.0%
	CCTTGCCAACCGCAGGAACA+GGG	-	tig0019615:161914-161933	None:intergenic	60.0%
	TCCTTGCCAACCGCAGGAAC+AGG	-	tig0019615:161915-161934	None:intergenic	60.0%
	GTTCCTGCGGTTGGCAAGGA+TGG	+	tig0019615:161915-161934	Msa1375000:CDS	60.0%
	GCGATGAGCATCCTTCGCCT+GGG	-	tig0019615:161996-162015	None:intergenic	60.0%
	AGCGATGAGCATCCTTCGCC+TGG	-	tig0019615:161997-162016	None:intergenic	60.0%
	TGGGATCAGGATGCGGCGAT+GGG	+	tig0019615:161828-161847	Msa1375000:intron	60.0%
	TTGCCAACCGCAGGAACAGG+GGG	-	tig0019615:161912-161931	None:intergenic	60.0%
	CTTGCCAACCGCAGGAACAG+GGG	-	tig0019615:161913-161932	None:intergenic	60.0%
	CCTTGCCAACCGCAGGAACA+GGG	-	tig0019615:161914-161933	None:intergenic	60.0%
	TCCTTGCCAACCGCAGGAAC+AGG	-	tig0019615:161915-161934	None:intergenic	60.0%
	GTTCCTGCGGTTGGCAAGGA+TGG	+	tig0019615:161915-161934	Msa1375000:CDS	60.0%
	GCGATGAGCATCCTTCGCCT+GGG	-	tig0019615:161996-162015	None:intergenic	60.0%
	AGCGATGAGCATCCTTCGCC+TGG	-	tig0019615:161997-162016	None:intergenic	60.0%
	GTGGGATCAGGATGCGGCGA+TGG	+	tig0019615:161827-161846	Msa1375000:intron	65.0%
	TCAGGATGCGGCGATGGGAC+TGG	+	tig0019615:161833-161852	Msa1375000:intron	65.0%
	GGAAGGTCCCCCTGTTCCTG+CGG	+	tig0019615:161902-161921	Msa1375000:CDS	65.0%
	CCCTGTTCCTGCGGTTGGCA+AGG	+	tig0019615:161911-161930	Msa1375000:CDS	65.0%
	TGGCCATCCTTGCCAACCGC+AGG	-	tig0019615:161921-161940	None:intergenic	65.0%
	GTGGGATCAGGATGCGGCGA+TGG	+	tig0019615:161827-161846	Msa1375000:intron	65.0%
	TCAGGATGCGGCGATGGGAC+TGG	+	tig0019615:161833-161852	Msa1375000:intron	65.0%
	GGAAGGTCCCCCTGTTCCTG+CGG	+	tig0019615:161902-161921	Msa1375000:CDS	65.0%
	CCCTGTTCCTGCGGTTGGCA+AGG	+	tig0019615:161911-161930	Msa1375000:CDS	65.0%
	TGGCCATCCTTGCCAACCGC+AGG	-	tig0019615:161921-161940	None:intergenic	65.0%
	GGTCCCCCTGTTCCTGCGGT+TGG	+	tig0019615:161906-161925	Msa1375000:CDS	70.0%
	GGTCCCCCTGTTCCTGCGGT+TGG	+	tig0019615:161906-161925	Msa1375000:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
tig0019615	gene	161272	163335	161272	ID=Msa1375000;Name=Msa1375000
tig0019615	mRNA	161272	163335	161272	ID=Msa1375000-mRNA-1;Parent=Msa1375000;Name=Msa1375000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=79\|1\|1\|1\|1\|1\|4\|289\|236
tig0019615	exon	161272	161510	161272	ID=Msa1375000-mRNA-1:exon:4169;Parent=Msa1375000-mRNA-1
tig0019615	exon	161598	161713	161598	ID=Msa1375000-mRNA-1:exon:4170;Parent=Msa1375000-mRNA-1
tig0019615	exon	161837	162097	161837	ID=Msa1375000-mRNA-1:exon:4171;Parent=Msa1375000-mRNA-1
tig0019615	exon	162873	163335	162873	ID=Msa1375000-mRNA-1:exon:4172;Parent=Msa1375000-mRNA-1
tig0019615	five_prime_UTR	161272	161350	161272	ID=Msa1375000-mRNA-1:five_prime_utr;Parent=Msa1375000-mRNA-1
tig0019615	CDS	161351	161510	161351	ID=Msa1375000-mRNA-1:cds;Parent=Msa1375000-mRNA-1
tig0019615	CDS	161598	161713	161598	ID=Msa1375000-mRNA-1:cds;Parent=Msa1375000-mRNA-1
tig0019615	CDS	161837	162097	161837	ID=Msa1375000-mRNA-1:cds;Parent=Msa1375000-mRNA-1
tig0019615	CDS	162873	163046	162873	ID=Msa1375000-mRNA-1:cds;Parent=Msa1375000-mRNA-1
tig0019615	three_prime_UTR	163047	163335	163047	ID=Msa1375000-mRNA-1:three_prime_utr;Parent=Msa1375000-mRNA-1

Gene Sequence

>Msa1375000

ATGATGATGGAATGTTTGAGTTCATCTTCTGTAGCAACAACAACTCTACCTTCTTTCTCCATCTTCCCTTCTTCAACAAGAACATCATCATCATCATCATCATCATCATCTCTTTCTTCTTCCAAGAAAACCTTCCACTTTCGTCTACCCTCTTCTAAGCGTGACGATGGTAACAACGATTCAGAATCGCAATCTAAATCATCATCCAACGAACTCAACTTCAACCTTTCTCCAGTTCCCACTAATCGCTGTTTCTCCATTTCCCCTCTTTCCAATGATGCGGCGATGGGACTGGTGTTGAGTGCAGCAACAGGTAGAGGATGGACAACAGGTTCTGGGATGGAAGGTCCCCCTGTTCCTGCGGTTGGCAAGGATGGCCAATCTGGGACTGACAATATTTCCACTTTCCCATGGTCACTCTTCACTAAATCTCCCAGGCGAAGGATGCTCATCGCTTTTACTTGTACCATTTGTGGCCAGCGAACTACTCGCGCTATTAATCCTCATGCTTACACTGATGGCACTGTTTTTGTTCAGTGTTGTGAATGCAATGCGTATCATAAGCTTGTGGATCACTTGAACTTGTTTCAGGAGACGAATTGCTATTTGAATTCAAGTTTTAAGTATAAAGGTCCTGGATGGGATGATCTCAAGTTCAGGTTCATGGACATAGATAGCGACGACGATGATGATGTATTCCCCGTTACATGA

Protein sequence

>Msa1375000

MMMECLSSSSVATTTLPSFSIFPSSTRTSSSSSSSSSLSSSKKTFHFRLPSSKRDDGNNDSESQSKSSSNELNFNLSPVPTNRCFSISPLSNDAAMGLVLSAATGRGWTTGSGMEGPPVPAVGKDGQSGTDNISTFPWSLFTKSPRRRMLIAFTCTICGQRTTRAINPHAYTDGTVFVQCCECNAYHKLVDHLNLFQETNCYLNSSFKYKGPGWDDLKFRFMDIDSDDDDDVFPVT*