AlfalfaGEDB | Msa0774540

M. sativa cultivar zhongmu-4 / Msa0774540

KEGG: K03537
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009249 GO:0009987 GO:0010467 GO:0018065 GO:0018193 GO:0018205 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564
PFAM: PF01900.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0774540	sp\|Q6AWV1\|POP5_ARATH	61.184	152	54	2	3	153	4	151	9.26e-65	197

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0774540	G7K656	100.000	153	0	0	1	153	1	153	4.78e-110	318

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002490	Msa0774540	0.804568	2.029229e-49	-8.615850e-47
Msa0004950	Msa0774540	0.803940	2.742321e-49	-8.615850e-47
Msa0008090	Msa0774540	0.835766	1.386428e-56	-8.615850e-47
Msa0025730	Msa0774540	0.815242	1.022145e-51	-8.615850e-47
Msa0027260	Msa0774540	0.831553	1.563700e-55	-8.615850e-47
Msa0029260	Msa0774540	0.805565	1.255610e-49	-8.615850e-47
Msa0032260	Msa0774540	0.835831	1.334737e-56	-8.615850e-47
Msa0040690	Msa0774540	0.810033	1.409498e-50	-8.615850e-47
Msa0042280	Msa0774540	0.802867	4.576780e-49	-8.615850e-47
Msa0047160	Msa0774540	0.831969	1.234891e-55	-8.615850e-47
Msa0048180	Msa0774540	0.817083	3.962770e-52	-8.615850e-47
Msa0057400	Msa0774540	0.810518	1.107794e-50	-8.615850e-47
Msa0060770	Msa0774540	0.801477	8.841399e-49	-8.615850e-47
Msa0073670	Msa0774540	0.806485	8.041990e-50	-8.615850e-47
Msa0090520	Msa0774540	0.817927	2.557954e-52	-8.615850e-47
Msa0091570	Msa0774540	0.811738	6.023380e-51	-8.615850e-47
Msa0094470	Msa0774540	0.836598	8.517875e-57	-8.615850e-47
Msa0115370	Msa0774540	0.801219	9.983847e-49	-8.615850e-47
Msa0115390	Msa0774540	0.814651	1.382289e-51	-8.615850e-47
Msa0603570	Msa0774540	0.806275	8.902003e-50	-8.615850e-47
Msa0610390	Msa0774540	0.814938	1.193820e-51	-8.615850e-47
Msa0613970	Msa0774540	0.808742	2.666937e-50	-8.615850e-47
Msa0615440	Msa0774540	0.803431	3.497854e-49	-8.615850e-47
Msa0615870	Msa0774540	0.809659	1.696023e-50	-8.615850e-47
Msa0623700	Msa0774540	0.808953	2.403461e-50	-8.615850e-47
Msa0631350	Msa0774540	0.805890	1.073137e-49	-8.615850e-47
Msa0644660	Msa0774540	0.804325	2.280242e-49	-8.615850e-47
Msa0650920	Msa0774540	0.822011	2.975404e-53	-8.615850e-47
Msa0661300	Msa0774540	0.818924	1.520576e-52	-8.615850e-47
Msa0666230	Msa0774540	0.807379	5.203089e-50	-8.615850e-47
Msa0687630	Msa0774540	0.827794	1.284715e-54	-8.615850e-47
Msa0689500	Msa0774540	0.830222	3.316737e-55	-8.615850e-47
Msa0691900	Msa0774540	0.821142	4.724966e-53	-8.615850e-47
Msa0692940	Msa0774540	0.818436	1.962008e-52	-8.615850e-47
Msa0694840	Msa0774540	0.816120	6.515106e-52	-8.615850e-47
Msa0694990	Msa0774540	0.819216	1.304919e-52	-8.615850e-47
Msa0698060	Msa0774540	0.800149	1.649936e-48	-8.615850e-47
Msa0698490	Msa0774540	0.802768	4.795676e-49	-8.615850e-47
Msa0698660	Msa0774540	0.805702	1.174994e-49	-8.615850e-47
Msa0722020	Msa0774540	0.818472	1.925335e-52	-8.615850e-47
Msa0733480	Msa0774540	0.930958	7.653215e-94	-8.615850e-47
Msa0735310	Msa0774540	0.804110	2.528517e-49	-8.615850e-47
Msa0751010	Msa0774540	0.806496	7.998633e-50	-8.615850e-47
Msa0763070	Msa0774540	0.800606	1.331760e-48	-8.615850e-47
Msa0774540	Msa0794050	0.818220	2.196671e-52	-8.615850e-47
Msa0774540	Msa0797750	0.819717	1.002883e-52	-8.615850e-47
Msa0774540	Msa0800370	0.807126	5.887198e-50	-8.615850e-47
Msa0774540	Msa0805500	0.821664	3.579500e-53	-8.615850e-47
Msa0774540	Msa0806920	0.807026	6.179768e-50	-8.615850e-47
Msa0774540	Msa0812140	0.908784	1.169895e-81	-8.615850e-47
Msa0774540	Msa0812570	0.809155	2.175996e-50	-8.615850e-47
Msa0774540	Msa0818770	0.810024	1.415675e-50	-8.615850e-47
Msa0774540	Msa0820990	0.809033	2.311263e-50	-8.615850e-47
Msa0774540	Msa0823090	0.817383	3.392836e-52	-8.615850e-47
Msa0774540	Msa0826500	0.804912	1.719967e-49	-8.615850e-47
Msa0774540	Msa0833310	0.824834	6.513117e-54	-8.615850e-47
Msa0774540	Msa0835280	0.821047	4.967789e-53	-8.615850e-47
Msa0774540	Msa0847080	0.804318	2.288349e-49	-8.615850e-47
Msa0774540	Msa0852390	0.938203	9.911429e-99	-8.615850e-47
Msa0774540	Msa0906780	0.815002	1.155305e-51	-8.615850e-47
Msa0774540	Msa0959000	0.806795	6.914065e-50	-8.615850e-47
Msa0774540	Msa0960830	0.813845	2.082930e-51	-8.615850e-47
Msa0774540	Msa0963020	0.802593	5.212627e-49	-8.615850e-47
Msa0774540	Msa0974810	0.803964	2.710611e-49	-8.615850e-47
Msa0774540	Msa1006840	0.812671	3.770985e-51	-8.615850e-47
Msa0774540	Msa1012720	0.800748	1.246147e-48	-8.615850e-47
Msa0774540	Msa1013040	0.827108	1.876481e-54	-8.615850e-47
Msa0774540	Msa1019240	0.839436	1.586166e-57	-8.615850e-47
Msa0774540	Msa1019260	0.840144	1.037603e-57	-8.615850e-47
Msa0774540	Msa1046020	0.812851	3.443664e-51	-8.615850e-47
Msa0774540	Msa1046060	0.810175	1.313389e-50	-8.615850e-47
Msa0774540	Msa1073900	0.807835	4.162818e-50	-8.615850e-47
Msa0774540	Msa1084470	0.814385	1.582513e-51	-8.615850e-47
Msa0774540	Msa1091100	0.808769	2.631329e-50	-8.615850e-47
Msa0774540	Msa1093330	0.805152	1.532626e-49	-8.615850e-47
Msa0774540	Msa1096230	0.801835	7.465062e-49	-8.615850e-47
Msa0774540	Msa1104140	0.817416	3.335711e-52	-8.615850e-47
Msa0774540	Msa1104210	0.826562	2.533774e-54	-8.615850e-47
Msa0774540	Msa1126510	0.815837	7.534170e-52	-8.615850e-47
Msa0774540	Msa1126770	0.815620	8.422073e-52	-8.615850e-47
Msa0774540	Msa1131560	0.822177	2.722803e-53	-8.615850e-47
Msa0774540	Msa1134090	0.812290	4.566623e-51	-8.615850e-47
Msa0774540	Msa1165780	0.808196	3.487359e-50	-8.615850e-47
Msa0774540	Msa1165870	0.808855	2.522591e-50	-8.615850e-47
Msa0774540	Msa1166330	0.831326	1.778139e-55	-8.615850e-47
Msa0774540	Msa1166340	0.833857	4.190609e-56	-8.615850e-47
Msa0774540	Msa1166860	0.815086	1.106862e-51	-8.615850e-47
Msa0774540	Msa1166870	0.839034	2.016623e-57	-8.615850e-47
Msa0774540	Msa1171870	0.806775	6.982155e-50	-8.615850e-47
Msa0774540	Msa1179950	0.834499	2.892953e-56	-8.615850e-47
Msa0774540	Msa1179980	0.832304	1.020583e-55	-8.615850e-47
Msa0774540	Msa1184370	0.809997	1.434634e-50	-8.615850e-47
Msa0774540	Msa1202580	0.808483	3.029906e-50	-8.615850e-47
Msa0774540	Msa1204250	0.818463	1.934851e-52	-8.615850e-47
Msa0774540	Msa1218600	0.802160	6.400824e-49	-8.615850e-47
Msa0774540	Msa1227690	0.822665	2.097854e-53	-8.615850e-47
Msa0774540	Msa1237940	0.811726	6.061474e-51	-8.615850e-47
Msa0774540	Msa1254730	0.808079	3.693123e-50	-8.615850e-47
Msa0774540	Msa1265630	0.832111	1.139207e-55	-8.615850e-47
Msa0774540	Msa1270620	0.833627	4.785088e-56	-8.615850e-47
Msa0774540	Msa1270690	0.829495	4.986293e-55	-8.615850e-47
Msa0774540	Msa1271580	0.806379	8.466808e-50	-8.615850e-47
Msa0774540	Msa1294840	0.802028	6.814492e-49	-8.615850e-47
Msa0774540	Msa1295110	0.816719	4.783328e-52	-8.615850e-47
Msa0774540	Msa1296830	0.818856	1.575883e-52	-8.615850e-47
Msa0774540	Msa1303580	0.808184	3.508976e-50	-8.615850e-47
Msa0774540	Msa1304820	0.818165	2.259544e-52	-8.615850e-47
Msa0774540	Msa1306430	0.802530	5.369985e-49	-8.615850e-47
Msa0774540	Msa1306990	0.831929	1.263485e-55	-8.615850e-47
Msa0774540	Msa1307950	0.818766	1.651345e-52	-8.615850e-47
Msa0774540	Msa1310690	0.804864	1.759950e-49	-8.615850e-47
Msa0774540	Msa1320390	0.801255	9.813461e-49	-8.615850e-47
Msa0774540	Msa1333110	0.818260	2.151006e-52	-8.615850e-47
Msa0774540	Msa1335940	0.804384	2.216362e-49	-8.615850e-47
Msa0774540	Msa1336560	0.806222	9.133392e-50	-8.615850e-47
Msa0774540	Msa1343290	0.807682	4.485726e-50	-8.615850e-47
Msa0774540	Msa1355700	0.819181	1.329189e-52	-8.615850e-47
Msa0774540	Msa1360140	0.801723	7.870439e-49	-8.615850e-47
Msa0774540	Msa1361520	0.809125	2.208732e-50	-8.615850e-47
Msa0774540	Msa1363330	0.803442	3.478982e-49	-8.615850e-47
Msa0774540	Msa1374120	0.810013	1.423656e-50	-8.615850e-47
Msa0774540	Msa1376650	0.810789	9.680814e-51	-8.615850e-47
Msa0774540	Msa1379760	0.818500	1.897318e-52	-8.615850e-47
Msa0774540	Msa1386600	0.804078	2.566692e-49	-8.615850e-47
Msa0774540	Msa1389510	0.804059	2.590025e-49	-8.615850e-47
Msa0774540	Msa1394290	0.824272	8.829770e-54	-8.615850e-47
Msa0774540	Msa1394500	0.805549	1.265103e-49	-8.615850e-47
Msa0774540	Msa1397810	0.818909	1.532859e-52	-8.615850e-47
Msa0774540	Msa1404010	0.808226	3.437542e-50	-8.615850e-47
Msa0774540	Msa1404190	0.808260	3.379142e-50	-8.615850e-47
Msa0774540	Msa1420990	0.811190	7.922643e-51	-8.615850e-47
Msa0774540	Msa1422580	0.800802	1.214825e-48	-8.615850e-47
Msa0774540	Msa1442850	0.802096	6.595815e-49	-8.615850e-47
Msa0774540	Msa1444310	0.813975	1.949325e-51	-8.615850e-47
Msa0774540	Msa1450280	0.813452	2.541121e-51	-8.615850e-47
Msa0774540	Msa1454680	0.818809	1.614773e-52	-8.615850e-47
Msa0774540	Msa1461280	0.817578	3.066406e-52	-8.615850e-47
Msa0774540	Msa1461490	0.807219	5.623939e-50	-8.615850e-47
Msa0774540	Msa1466300	0.809529	1.808579e-50	-8.615850e-47
Msa0127310	Msa0774540	0.846143	2.614073e-59	-8.615850e-47
Msa0128860	Msa0774540	0.812301	4.541527e-51	-8.615850e-47
Msa0137990	Msa0774540	0.817662	2.934948e-52	-8.615850e-47
Msa0140650	Msa0774540	0.816657	4.938635e-52	-8.615850e-47
Msa0142950	Msa0774540	0.817760	2.789314e-52	-8.615850e-47
Msa0165950	Msa0774540	0.817705	2.870597e-52	-8.615850e-47
Msa0166750	Msa0774540	0.805669	1.193746e-49	-8.615850e-47
Msa0167480	Msa0774540	0.805837	1.100838e-49	-8.615850e-47
Msa0169300	Msa0774540	0.804650	1.950829e-49	-8.615850e-47
Msa0174730	Msa0774540	0.810068	1.385055e-50	-8.615850e-47
Msa0183460	Msa0774540	0.818267	2.142549e-52	-8.615850e-47
Msa0183900	Msa0774540	0.825461	4.628609e-54	-8.615850e-47
Msa0191050	Msa0774540	0.801546	8.554975e-49	-8.615850e-47
Msa0194480	Msa0774540	0.815659	8.256151e-52	-8.615850e-47
Msa0199690	Msa0774540	0.824147	9.450619e-54	-8.615850e-47
Msa0199880	Msa0774540	0.830567	2.731133e-55	-8.615850e-47
Msa0209350	Msa0774540	0.805953	1.040787e-49	-8.615850e-47
Msa0214710	Msa0774540	0.800811	1.209575e-48	-8.615850e-47
Msa0226460	Msa0774540	0.800050	1.728828e-48	-8.615850e-47
Msa0226470	Msa0774540	0.822990	1.762198e-53	-8.615850e-47
Msa0227400	Msa0774540	0.801072	1.070071e-48	-8.615850e-47
Msa0231100	Msa0774540	0.803543	3.315592e-49	-8.615850e-47
Msa0231880	Msa0774540	0.808288	3.333491e-50	-8.615850e-47
Msa0233350	Msa0774540	0.805708	1.171422e-49	-8.615850e-47
Msa0236270	Msa0774540	0.828857	7.118174e-55	-8.615850e-47
Msa0366890	Msa0774540	0.840329	9.282647e-58	-8.615850e-47
Msa0369050	Msa0774540	0.802307	5.969020e-49	-8.615850e-47
Msa0376300	Msa0774540	0.824117	9.601173e-54	-8.615850e-47
Msa0376310	Msa0774540	0.815363	9.608756e-52	-8.615850e-47
Msa0376690	Msa0774540	0.836656	8.233897e-57	-8.615850e-47
Msa0384880	Msa0774540	0.800900	1.159981e-48	-8.615850e-47
Msa0394400	Msa0774540	0.805693	1.180444e-49	-8.615850e-47
Msa0402330	Msa0774540	0.809768	1.606924e-50	-8.615850e-47
Msa0414800	Msa0774540	0.838499	2.773216e-57	-8.615850e-47
Msa0419520	Msa0774540	0.804743	1.865349e-49	-8.615850e-47
Msa0443390	Msa0774540	0.836681	8.113051e-57	-8.615850e-47
Msa0453230	Msa0774540	0.830832	2.351157e-55	-8.615850e-47
Msa0458060	Msa0774540	0.851105	1.102338e-60	-8.615850e-47
Msa0465550	Msa0774540	0.817252	3.631165e-52	-8.615850e-47
Msa0471590	Msa0774540	0.833310	5.738090e-56	-8.615850e-47
Msa0481480	Msa0774540	0.805715	1.167860e-49	-8.615850e-47
Msa0242410	Msa0774540	0.802213	6.242463e-49	-8.615850e-47
Msa0262310	Msa0774540	0.819516	1.114534e-52	-8.615850e-47
Msa0275360	Msa0774540	0.823844	1.113102e-53	-8.615850e-47
Msa0280430	Msa0774540	0.831241	1.866503e-55	-8.615850e-47
Msa0281530	Msa0774540	0.808157	3.554804e-50	-8.615850e-47
Msa0291520	Msa0774540	0.818015	2.442962e-52	-8.615850e-47
Msa0304590	Msa0774540	0.847661	1.004324e-59	-8.615850e-47
Msa0304660	Msa0774540	0.841123	5.750634e-58	-8.615850e-47
Msa0331700	Msa0774540	0.840413	8.829566e-58	-8.615850e-47
Msa0337650	Msa0774540	0.826295	2.934723e-54	-8.615850e-47
Msa0347680	Msa0774540	0.805986	1.024153e-49	-8.615850e-47
Msa0348830	Msa0774540	0.801088	1.061927e-48	-8.615850e-47
Msa0355270	Msa0774540	0.806693	7.265623e-50	-8.615850e-47
Msa0360990	Msa0774540	0.840584	7.961401e-58	-8.615850e-47
Msa0484290	Msa0774540	0.808902	2.465406e-50	-8.615850e-47
Msa0508590	Msa0774540	0.828594	8.242044e-55	-8.615850e-47
Msa0508630	Msa0774540	0.822853	1.897070e-53	-8.615850e-47
Msa0524500	Msa0774540	0.807110	5.930741e-50	-8.615850e-47
Msa0526540	Msa0774540	0.805518	1.284198e-49	-8.615850e-47
Msa0534900	Msa0774540	0.822980	1.771644e-53	-8.615850e-47
Msa0546360	Msa0774540	0.806119	9.604697e-50	-8.615850e-47
Msa0556790	Msa0774540	0.827219	1.765742e-54	-8.615850e-47
Msa0576940	Msa0774540	0.805513	1.287327e-49	-8.615850e-47
Msa0581070	Msa0774540	0.812127	4.957584e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0774540	MtrunA17_Chr5g0428771	100.000	153	0	0	1	153	1	153	9.21e-114	318

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0774540	AT1G04635.1	61.184	152	54	2	3	153	4	151	9.41e-66	197

Find 52 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATAGCATCTTGGTGAATTT+TGG	0.109041	5_2:+50882885	Msa0774540:CDS
CTAATGTACTATAGTCTTAA+TGG	0.211551	5_2:+50885670	Msa0774540:three_prime_UTR
GTGTGGTTTGGCTGCATCAC+TGG	0.252366	5_2:+50882911	Msa0774540:CDS
ATCTATAGTTACAGGCTTAC+AGG	0.265987	5_2:+50885542	Msa0774540:three_prime_UTR
TCAAGACTATCTATAGTTAC+AGG	0.267411	5_2:+50885534	Msa0774540:three_prime_UTR
TTTAATTTGCTTGATTTATC+TGG	0.270551	5_2:+50883188	Msa0774540:CDS
CTTTGGTTCAGGAAATTTAC+AGG	0.272476	5_2:+50885186	Msa0774540:intron
GTCTGTGTTCAATCACAAAT+TGG	0.274240	5_2:+50885351	Msa0774540:three_prime_UTR
ATTTGAGCAGTTCAAACTTA+TGG	0.275431	5_2:+50885246	Msa0774540:CDS
TCTTGCTAAGATCGAAGTTT+TGG	0.279590	5_2:+50885315	Msa0774540:CDS
TCACTAATGTGTGCATCATT+AGG	0.290850	5_2:+50883090	Msa0774540:CDS
CCCGCCGCTTGGTCCTTGTT+AGG	0.311025	5_2:-50882816	None:intergenic
CACAAATTGGCCACAACTCT+TGG	0.337659	5_2:+50885364	Msa0774540:three_prime_UTR
TCAAGCAAATTAAACACAAC+TGG	0.340230	5_2:-50883179	None:intergenic
CTTGCTTCAATTTGTTAGTC+AGG	0.340332	5_2:-50885647	None:intergenic
CACTAATGTGTGCATCATTA+GGG	0.362836	5_2:+50883091	Msa0774540:CDS
GATGGAGCTTATACCATTCA+TGG	0.376840	5_2:-50885590	None:intergenic
TAGAAAATGCTGCTATCTCC+TGG	0.379620	5_2:+50885847	Msa0774540:three_prime_UTR
ATCACAATGGTCAGAAGTAT+TGG	0.427749	5_2:+50883149	Msa0774540:CDS
ATGATGCACACATTAGTGAT+TGG	0.442861	5_2:-50883086	None:intergenic
ACCTCCATTGTAACCATGAA+TGG	0.479248	5_2:+50885577	Msa0774540:three_prime_UTR
GTTGTGCGATTCTCCACTCC+AGG	0.495971	5_2:+50881670	Msa0774540:five_prime_UTR
GCATCACTGGGATCATTTCA+AGG	0.508076	5_2:+50882924	Msa0774540:CDS
GTCTGTCTGTACTAGAATGA+TGG	0.511160	5_2:-50885608	None:intergenic
GGGTTCTAGGAAAAGGGTGA+TGG	0.511596	5_2:+50882752	Msa0774540:intron
TGTGGTTTGGCTGCATCACT+GGG	0.515656	5_2:+50882912	Msa0774540:CDS
GCTCTCGTTCGCTCTCGTCC+AGG	0.519363	5_2:+50881648	Msa0774540:five_prime_UTR
TGCTATAAAAGATAGCATCT+TGG	0.524489	5_2:+50882875	Msa0774540:CDS
GAGCAGTTCAAACTTATGGT+TGG	0.536131	5_2:+50885250	Msa0774540:CDS
TAATAGAATCACCCGCCGCT+TGG	0.540293	5_2:-50882827	None:intergenic
AATACTTCTGACCATTGTGA+TGG	0.548904	5_2:-50883147	None:intergenic
GAGTGGAGAATCGCACAACC+TGG	0.549381	5_2:-50881666	None:intergenic
TCTATAGTTACAGGCTTACA+GGG	0.552556	5_2:+50885543	Msa0774540:three_prime_UTR
CCTAACAAGGACCAAGCGGC+GGG	0.555344	5_2:+50882816	Msa0774540:CDS
TATACCATTCATGGTTACAA+TGG	0.564761	5_2:-50885581	None:intergenic
ATTTAAACTTCCAAGAGTTG+TGG	0.568256	5_2:-50885374	None:intergenic
GACTGCTGCATTAAAGTGTG+AGG	0.576828	5_2:+50885216	Msa0774540:CDS
GAGAGCGCAGAGAGAGACAA+AGG	0.579319	5_2:-50881631	None:intergenic
ACCATTCATGGTTACAATGG+AGG	0.580680	5_2:-50885578	None:intergenic
ATGTAACTACACCATATGCT+AGG	0.583964	5_2:-50885478	None:intergenic
AGAAAATGCTGCTATCTCCT+GGG	0.591464	5_2:+50885848	Msa0774540:three_prime_UTR
CTCGCACACATACATTGCCC+AGG	0.603017	5_2:-50885865	None:intergenic
CAAGCAAATTAAACACAACT+GGG	0.605699	5_2:-50883178	None:intergenic
AGAAGCGAACAAACCTGGAG+TGG	0.606943	5_2:-50881683	None:intergenic
TCCTAACAAGGACCAAGCGG+CGG	0.612927	5_2:+50882815	Msa0774540:CDS
AAACAGATACATGGTGATGG+AGG	0.614082	5_2:+50882782	Msa0774540:CDS
CATTCTAGTACAGACAGACA+TGG	0.626237	5_2:+50885612	Msa0774540:three_prime_UTR
TTACAGGCTTACAGGGGACA+TGG	0.637149	5_2:+50885550	Msa0774540:three_prime_UTR
TGGTGATCGATTATCAGCTG+AGG	0.675265	5_2:+50885270	Msa0774540:CDS
GAATCCTAACAAGGACCAAG+CGG	0.677581	5_2:+50882812	Msa0774540:CDS
AGTATGGGCTTCCATCACAA+TGG	0.688002	5_2:+50883136	Msa0774540:CDS
CTATAGTTACAGGCTTACAG+GGG	0.739906	5_2:+50885544	Msa0774540:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAACAATTTGTTTAAATTT+CGG	+	chr5_2:50882138-50882157	Msa0774540:intron	10.0%
!!!	ATTTTATGTTTTTTTAATAG+GGG	+	chr5_2:50882453-50882472	Msa0774540:intron	10.0%
!!!	TTATTATTATTATCATTTTG+GGG	+	chr5_2:50882486-50882505	Msa0774540:intron	10.0%
!!!	TATTTTGTATAATGTTTATT+TGG	-	chr5_2:50883562-50883581	None:intergenic	10.0%
!!	CGAATAAAATAAATCTAAAA+AGG	-	chr5_2:50881760-50881779	None:intergenic	15.0%
!!!	ATCTTGATTTGTTTTAAAAT+CGG	-	chr5_2:50881809-50881828	None:intergenic	15.0%
!!!	TAACAATTTGTTTAAATTTC+GGG	+	chr5_2:50882139-50882158	Msa0774540:intron	15.0%
!!!	TATTATTATTATCATTTTGG+GGG	+	chr5_2:50882487-50882506	Msa0774540:intron	15.0%
!!!	TAATTTGAAAACTTTGATTT+TGG	+	chr5_2:50882731-50882750	Msa0774540:intron	15.0%
!!!	AATTTGAAAACTTTGATTTT+GGG	+	chr5_2:50882732-50882751	Msa0774540:intron	15.0%
!!	TTATACAAAATATGAAATGA+AGG	+	chr5_2:50883570-50883589	Msa0774540:intron	15.0%
!!	AAAAGTCTATATGTATAAAT+AGG	-	chr5_2:50884108-50884127	None:intergenic	15.0%
!!!	GAAATAATTTAAAATCAGAT+AGG	-	chr5_2:50884509-50884528	None:intergenic	15.0%
!!	TATTAATTGAAAAGTAAGAA+AGG	-	chr5_2:50884955-50884974	None:intergenic	15.0%
!!	AATAGAGTAAAGATTCAATT+AGG	+	chr5_2:50881841-50881860	Msa0774540:intron	20.0%
!!!	ACATTTTCAATGACTAATTT+TGG	+	chr5_2:50881922-50881941	Msa0774540:intron	20.0%
!!!	CATTTTCAATGACTAATTTT+GGG	+	chr5_2:50881923-50881942	Msa0774540:intron	20.0%
!!!	ATTATTATTATCATTTTGGG+GGG	+	chr5_2:50882488-50882507	Msa0774540:intron	20.0%
!!	TATTTAATATGTATAGACTG+TGG	+	chr5_2:50882619-50882638	Msa0774540:intron	20.0%
!!!	TTTGATAATTTTCTCACTTT+TGG	+	chr5_2:50883035-50883054	Msa0774540:intron	20.0%
!!!	TTTAATTTGCTTGATTTATC+TGG	+	chr5_2:50883188-50883207	Msa0774540:CDS	20.0%
!!	TTATTCCAATATTGTCATAA+AGG	-	chr5_2:50883272-50883291	None:intergenic	20.0%
!!	AATATTGGAATAACAGAAAA+GGG	+	chr5_2:50883279-50883298	Msa0774540:intron	20.0%
!!	AAAAGAAAATTGAGAAATTC+TGG	+	chr5_2:50883326-50883345	Msa0774540:intron	20.0%
!!!	ATATTGGTTATGAAATATGA+AGG	-	chr5_2:50883852-50883871	None:intergenic	20.0%
!!	TATTTCTTATACCAAAAGAA+AGG	-	chr5_2:50883908-50883927	None:intergenic	20.0%
!!	AAAATTAAAAATTCTCCTCA+TGG	+	chr5_2:50884260-50884279	Msa0774540:intron	20.0%
!!!	AAGTTGGTTGAAATAAAATT+TGG	-	chr5_2:50884311-50884330	None:intergenic	20.0%
!!!	CCAAAAATAATCTTGTTTTT+GGG	-	chr5_2:50884564-50884583	None:intergenic	20.0%
!!	AAATTGATAAAACAGAGAAA+AGG	-	chr5_2:50885076-50885095	None:intergenic	20.0%
!!	TTATTCGTGTAGATTTTCTT+TGG	+	chr5_2:50881773-50881792	Msa0774540:intron	25.0%
!	GGATTTATGTTTCATTGAAT+TGG	-	chr5_2:50881889-50881908	None:intergenic	25.0%
!	GAAAATGTCATAGACTAATT+TGG	-	chr5_2:50881910-50881929	None:intergenic	25.0%
!!!	AAATCCAAGGTTTTAAATGA+AGG	-	chr5_2:50882077-50882096	None:intergenic	25.0%
!!	GTTTGTTCTGATTGTAATTT+TGG	+	chr5_2:50882187-50882206	Msa0774540:intron	25.0%
!!	CTCAGTATTAAAAAAGTGTA+TGG	-	chr5_2:50882270-50882289	None:intergenic	25.0%
!!!	TTATGTTTTTTTAATAGGGG+AGG	+	chr5_2:50882456-50882475	Msa0774540:intron	25.0%
!	TGAGAAAATTACTAAACAGA+AGG	-	chr5_2:50882994-50883013	None:intergenic	25.0%
!!!	TAATTTTCTCACTTTTGGAT+CGG	+	chr5_2:50883040-50883059	Msa0774540:intron	25.0%
!!	AGAAGAGTATGAAAAAGTAT+GGG	+	chr5_2:50883121-50883140	Msa0774540:CDS	25.0%
!	CAAAAAAGGAAGGAAAAAAA+AGG	-	chr5_2:50883240-50883259	None:intergenic	25.0%
!	CAATATTGGAATAACAGAAA+AGG	+	chr5_2:50883278-50883297	Msa0774540:intron	25.0%
!	ATATTGGAATAACAGAAAAG+GGG	+	chr5_2:50883280-50883299	Msa0774540:intron	25.0%
!!	TGTGTTAGATACTATTTTCA+TGG	+	chr5_2:50883303-50883322	Msa0774540:intron	25.0%
!!	ATACTGGTTATGAAATATGA+AGG	-	chr5_2:50883495-50883514	None:intergenic	25.0%
!	TTAAAGAAAAGTCTATCTCA+GGG	-	chr5_2:50883643-50883662	None:intergenic	25.0%
!	ATTAAAGAAAAGTCTATCTC+AGG	-	chr5_2:50883644-50883663	None:intergenic	25.0%
!!	TGAGATAGACTTTTCTTTAA+TGG	+	chr5_2:50883643-50883662	Msa0774540:intron	25.0%
!	TATTTCTCTATAGTCTATCT+CGG	-	chr5_2:50883672-50883691	None:intergenic	25.0%
!!!	TTTTGAGAAATCTATATACC+AGG	-	chr5_2:50883728-50883747	None:intergenic	25.0%
!	AAAAAAGTCCTGTTATATAG+AGG	+	chr5_2:50883745-50883764	Msa0774540:intron	25.0%
!	TTCTATTACCTCTATATAAC+AGG	-	chr5_2:50883756-50883775	None:intergenic	25.0%
!	TAAGAAATAATTCCCAAAAC+CGG	+	chr5_2:50883919-50883938	Msa0774540:intron	25.0%
!	TGAGAAATGATAAAGAGAAT+AGG	+	chr5_2:50883981-50884000	Msa0774540:intron	25.0%
!!!	AATAATCTTGTTTTTGGGAA+AGG	-	chr5_2:50884559-50884578	None:intergenic	25.0%
!!	CCCAAAAACAAGATTATTTT+TGG	+	chr5_2:50884561-50884580	Msa0774540:intron	25.0%
!!!	GCCAAAAATAATCTTGTTTT+TGG	-	chr5_2:50884565-50884584	None:intergenic	25.0%
!!	ATGATCAACACTATGTTTTT+AGG	+	chr5_2:50884756-50884775	Msa0774540:intron	25.0%
!!!	TTTTTAGGTTACAACAATTC+AGG	+	chr5_2:50884771-50884790	Msa0774540:intron	25.0%
!!!	TGAAATTTTTGGCAGAAAAT+TGG	+	chr5_2:50884863-50884882	Msa0774540:intron	25.0%
!	GTAATATGCAAAACATGATA+AGG	-	chr5_2:50885005-50885024	None:intergenic	25.0%
!!	CTAATGTACTATAGTCTTAA+TGG	+	chr5_2:50885670-50885689	Msa0774540:three_prime_UTR	25.0%
!!	TGCTTTGGATTTTCTGTATT+TGG	+	chr5_2:50881722-50881741	Msa0774540:intron	30.0%
!!!	ATTTTGGTGTTTACTTTGTC+TGG	+	chr5_2:50882203-50882222	Msa0774540:intron	30.0%
	TGAGACAATAAATTCCTAAG+TGG	+	chr5_2:50882525-50882544	Msa0774540:intron	30.0%
	CTTTACTTAATCAAGATCGT+TGG	-	chr5_2:50882668-50882687	None:intergenic	30.0%
!!!	AAACTTTGATTTTGGGTTCT+AGG	+	chr5_2:50882739-50882758	Msa0774540:intron	30.0%
!	GGTTTTTATGAATCCTAACA+AGG	+	chr5_2:50882803-50882822	Msa0774540:CDS	30.0%
!	GATGCTATCTTTTATAGCAT+TGG	-	chr5_2:50882874-50882893	None:intergenic	30.0%
	TGCTATAAAAGATAGCATCT+TGG	+	chr5_2:50882875-50882894	Msa0774540:CDS	30.0%
!	ATAGCATCTTGGTGAATTTT+GGG	+	chr5_2:50882886-50882905	Msa0774540:CDS	30.0%
	CTAAACAGAAGGAAAACAAT+AGG	-	chr5_2:50882983-50883002	None:intergenic	30.0%
!	GAGAAGAGTATGAAAAAGTA+TGG	+	chr5_2:50883120-50883139	Msa0774540:CDS	30.0%
	CAAGCAAATTAAACACAACT+GGG	-	chr5_2:50883181-50883200	None:intergenic	30.0%
	TCAAGCAAATTAAACACAAC+TGG	-	chr5_2:50883182-50883201	None:intergenic	30.0%
	GAACTCCTTTATGACAATAT+TGG	+	chr5_2:50883264-50883283	Msa0774540:intron	30.0%
!	TTCTGTTTCTTCTACATAAC+AGG	-	chr5_2:50883393-50883412	None:intergenic	30.0%
	TTAATGATAACCCAAGATGA+GGG	-	chr5_2:50883524-50883543	None:intergenic	30.0%
	TCATCTTGGGTTATCATTAA+CGG	+	chr5_2:50883524-50883543	Msa0774540:intron	30.0%
	TTTACTATTACTCACGCTAT+CGG	-	chr5_2:50883612-50883631	None:intergenic	30.0%
	ATAGCGTGAGTAATAGTAAA+TGG	+	chr5_2:50883612-50883631	Msa0774540:intron	30.0%
	TAGCGTGAGTAATAGTAAAT+GGG	+	chr5_2:50883613-50883632	Msa0774540:intron	30.0%
	ATTTCTCTATAGTCTATCTC+GGG	-	chr5_2:50883671-50883690	None:intergenic	30.0%
	AAGAAATAATTCCCAAAACC+GGG	+	chr5_2:50883920-50883939	Msa0774540:intron	30.0%
	TAAGAGTTGTTAGTTAGTTG+AGG	-	chr5_2:50884136-50884155	None:intergenic	30.0%
	AGTAATAGATTTCAACCTTG+AGG	-	chr5_2:50884209-50884228	None:intergenic	30.0%
	TCGTTTCTCTGTAATAATGA+TGG	+	chr5_2:50884714-50884733	Msa0774540:intron	30.0%
!!	TTGATCATTCTTTTTAGCGA+TGG	-	chr5_2:50884744-50884763	None:intergenic	30.0%
	ACTAATAGATGACATGACTT+TGG	+	chr5_2:50884814-50884833	Msa0774540:intron	30.0%
	TGGTTCATAGTAGTTTGATA+TGG	+	chr5_2:50884883-50884902	Msa0774540:intron	30.0%
	CATAGTAGTTTGATATGGTT+TGG	+	chr5_2:50884888-50884907	Msa0774540:intron	30.0%
!!	TAGTTTGATATGGTTTGGTA+GGG	+	chr5_2:50884893-50884912	Msa0774540:intron	30.0%
	TATCAATTTGATCTTGCCAT+TGG	+	chr5_2:50885087-50885106	Msa0774540:intron	30.0%
	AAAAGATGGTATCATGCATA+TGG	-	chr5_2:50885113-50885132	None:intergenic	30.0%
!	CAAAGGTACAATTTCATATC+AGG	-	chr5_2:50885171-50885190	None:intergenic	30.0%
	CTGATATGAAATTGTACCTT+TGG	+	chr5_2:50885169-50885188	Msa0774540:intron	30.0%
	ATTTGAGCAGTTCAAACTTA+TGG	+	chr5_2:50885246-50885265	Msa0774540:CDS	30.0%
	ATTTAAACTTCCAAGAGTTG+TGG	-	chr5_2:50885377-50885396	None:intergenic	30.0%
!	ATTGTAGTTTTCCTAGCATA+TGG	+	chr5_2:50885467-50885486	Msa0774540:three_prime_UTR	30.0%
!!	TGAAATTTTAAGCTTGCTCA+TGG	-	chr5_2:50885510-50885529	None:intergenic	30.0%
	TCAAGACTATCTATAGTTAC+AGG	+	chr5_2:50885534-50885553	Msa0774540:three_prime_UTR	30.0%
	TATACCATTCATGGTTACAA+TGG	-	chr5_2:50885584-50885603	None:intergenic	30.0%
!	GCATTTTCTGAATAACAGTA+TGG	-	chr5_2:50885740-50885759	None:intergenic	30.0%
!	AATGCTTGAAACATTTTGAG+TGG	+	chr5_2:50885755-50885774	Msa0774540:three_prime_UTR	30.0%
	CTTTACTTGCTCAATTGCTT+TGG	+	chr5_2:50881707-50881726	Msa0774540:intron	35.0%
!	TCGTGTAGATTTTCTTTGGT+TGG	+	chr5_2:50881777-50881796	Msa0774540:intron	35.0%
	ACATTGGTCGCATTTCTTAT+GGG	-	chr5_2:50881969-50881988	None:intergenic	35.0%
!!!	CCAAGGTTTTAAATGAAGGT+TGG	-	chr5_2:50882073-50882092	None:intergenic	35.0%
!	CCAACCTTCATTTAAAACCT+TGG	+	chr5_2:50882070-50882089	Msa0774540:intron	35.0%
	AGCATTGTAGCATAAATCCA+AGG	-	chr5_2:50882090-50882109	None:intergenic	35.0%
	TTTAAATTTCGGGCTATTGC+TGG	+	chr5_2:50882149-50882168	Msa0774540:intron	35.0%
!	GTGTTTACTTTGTCTGGTTT+GGG	+	chr5_2:50882209-50882228	Msa0774540:intron	35.0%
!	TGTTTACTTTGTCTGGTTTG+GGG	+	chr5_2:50882210-50882229	Msa0774540:intron	35.0%
!!	TGGGGGTATTCTAAGTAATT+AGG	+	chr5_2:50882228-50882247	Msa0774540:intron	35.0%
!!	TAATACTGAGTTGATACACC+AGG	+	chr5_2:50882280-50882299	Msa0774540:intron	35.0%
!!	ATTATTATCATTTTGGGGGG+TGG	+	chr5_2:50882491-50882510	Msa0774540:intron	35.0%
!!	TTATTATCATTTTGGGGGGT+GGG	+	chr5_2:50882492-50882511	Msa0774540:intron	35.0%
!!!	TGATTTTGGGTTCTAGGAAA+AGG	+	chr5_2:50882745-50882764	Msa0774540:intron	35.0%
!!!	GATTTTGGGTTCTAGGAAAA+GGG	+	chr5_2:50882746-50882765	Msa0774540:intron	35.0%
	GGTGTTCAAAAACAGATACA+TGG	+	chr5_2:50882773-50882792	Msa0774540:CDS	35.0%
	CAAAAACAGATACATGGTGA+TGG	+	chr5_2:50882779-50882798	Msa0774540:CDS	35.0%
!	GATAGCATCTTGGTGAATTT+TGG	+	chr5_2:50882885-50882904	Msa0774540:CDS	35.0%
!	TAGCATCTTGGTGAATTTTG+GGG	+	chr5_2:50882887-50882906	Msa0774540:CDS	35.0%
	ATGATGCACACATTAGTGAT+TGG	-	chr5_2:50883089-50883108	None:intergenic	35.0%
	TCACTAATGTGTGCATCATT+AGG	+	chr5_2:50883090-50883109	Msa0774540:CDS	35.0%
	CACTAATGTGTGCATCATTA+GGG	+	chr5_2:50883091-50883110	Msa0774540:CDS	35.0%
	AATACTTCTGACCATTGTGA+TGG	-	chr5_2:50883150-50883169	None:intergenic	35.0%
!	ATCACAATGGTCAGAAGTAT+TGG	+	chr5_2:50883149-50883168	Msa0774540:CDS	35.0%
	TAAGAGCAAATACTGCATGT+TGG	+	chr5_2:50883211-50883230	Msa0774540:intron	35.0%
	AAAGGAGTTCGCAACAAAAA+AGG	-	chr5_2:50883254-50883273	None:intergenic	35.0%
	TAGATCAGGATAACAAGCAT+CGG	-	chr5_2:50883439-50883458	None:intergenic	35.0%
	TTGCAAATGAGTGATAGATC+AGG	-	chr5_2:50883453-50883472	None:intergenic	35.0%
	TAATGATAACCCAAGATGAG+GGG	-	chr5_2:50883523-50883542	None:intergenic	35.0%
	GTTAATGATAACCCAAGATG+AGG	-	chr5_2:50883525-50883544	None:intergenic	35.0%
	TTTCTCTATAGTCTATCTCG+GGG	-	chr5_2:50883670-50883689	None:intergenic	35.0%
	TCTCTGTAATCATAAAGTCC+TGG	+	chr5_2:50883707-50883726	Msa0774540:intron	35.0%
	TATGAAGGCTTTCAATTGTG+TGG	-	chr5_2:50883837-50883856	None:intergenic	35.0%
	CCAACAATAATCCACAATGA+GGG	-	chr5_2:50883880-50883899	None:intergenic	35.0%
!	CCTCATTGTGGATTATTGTT+GGG	+	chr5_2:50883878-50883897	Msa0774540:intron	35.0%
	TGAGGTATACTGCTATTGAA+AGG	+	chr5_2:50883957-50883976	Msa0774540:intron	35.0%
	AGTAGTGACTCTATTGTGAA+GGG	-	chr5_2:50884032-50884051	None:intergenic	35.0%
!!	TTGAGGATAAGGTTGTTTTG+CGG	-	chr5_2:50884192-50884211	None:intergenic	35.0%
	AGATTTCAACCTTGAGGATA+AGG	-	chr5_2:50884203-50884222	None:intergenic	35.0%
	TTACTGTCTTCTTGTTCCAT+TGG	+	chr5_2:50884224-50884243	Msa0774540:intron	35.0%
	TACTGTCTTCTTGTTCCATT+GGG	+	chr5_2:50884225-50884244	Msa0774540:intron	35.0%
!!!	TTTTTTTTCTCTGCACCCAA+TGG	-	chr5_2:50884243-50884262	None:intergenic	35.0%
	GCAACAATGCTGAAAAAACA+AGG	-	chr5_2:50884481-50884500	None:intergenic	35.0%
!!!	TGTTTTTGGGAAAGGAAGTT+AGG	-	chr5_2:50884551-50884570	None:intergenic	35.0%
	GGCAAAGAGAACATTTATGA+AGG	-	chr5_2:50884593-50884612	None:intergenic	35.0%
!!	GTAGTTTGATATGGTTTGGT+AGG	+	chr5_2:50884892-50884911	Msa0774540:intron	35.0%
	TCAGAGTTTCATTCAGATGA+TGG	-	chr5_2:50885053-50885072	None:intergenic	35.0%
	TCTCTGAGTGAAAGAAAAGA+TGG	-	chr5_2:50885127-50885146	None:intergenic	35.0%
!	TGAAATTGTACCTTTGGTTC+AGG	+	chr5_2:50885175-50885194	Msa0774540:intron	35.0%
	CTGTAAATTTCCTGAACCAA+AGG	-	chr5_2:50885188-50885207	None:intergenic	35.0%
!	CTTTGGTTCAGGAAATTTAC+AGG	+	chr5_2:50885186-50885205	Msa0774540:intron	35.0%
!	TCTTGCTAAGATCGAAGTTT+TGG	+	chr5_2:50885315-50885334	Msa0774540:CDS	35.0%
	GTCTGTGTTCAATCACAAAT+TGG	+	chr5_2:50885351-50885370	Msa0774540:three_prime_UTR	35.0%
	ATGTAACTACACCATATGCT+AGG	-	chr5_2:50885481-50885500	None:intergenic	35.0%
	ATCTATAGTTACAGGCTTAC+AGG	+	chr5_2:50885542-50885561	Msa0774540:three_prime_UTR	35.0%
	TCTATAGTTACAGGCTTACA+GGG	+	chr5_2:50885543-50885562	Msa0774540:three_prime_UTR	35.0%
!!	CTTGCTTCAATTTGTTAGTC+AGG	-	chr5_2:50885650-50885669	None:intergenic	35.0%
	AAAGTAGAAGCGAACAAACC+TGG	-	chr5_2:50881691-50881710	None:intergenic	40.0%
	CACATTGGTCGCATTTCTTA+TGG	-	chr5_2:50881970-50881989	None:intergenic	40.0%
!	AGGTTGGTTAGCTGCAATTT+AGG	-	chr5_2:50882057-50882076	None:intergenic	40.0%
	GGTGTTTACTTTGTCTGGTT+TGG	+	chr5_2:50882208-50882227	Msa0774540:intron	40.0%
!!	GTTTACTTTGTCTGGTTTGG+GGG	+	chr5_2:50882211-50882230	Msa0774540:intron	40.0%
	ACTGTCTCTTCACTACACTA+CGG	-	chr5_2:50882391-50882410	None:intergenic	40.0%
!!	TATTATCATTTTGGGGGGTG+GGG	+	chr5_2:50882493-50882512	Msa0774540:intron	40.0%
	AACCACTTCATTAGCACACA+TGG	+	chr5_2:50882583-50882602	Msa0774540:intron	40.0%
	ATCCATGTGTGCTAATGAAG+TGG	-	chr5_2:50882588-50882607	None:intergenic	40.0%
!!	AAACAGATACATGGTGATGG+AGG	+	chr5_2:50882782-50882801	Msa0774540:CDS	40.0%
	GAGTTCGCAACAAAAAAGGA+AGG	-	chr5_2:50883250-50883269	None:intergenic	40.0%
	GAAATGAAGGTCAACACATC+AGG	+	chr5_2:50883583-50883602	Msa0774540:intron	40.0%
	AGTGACAGGATGATAAGCAT+TGG	-	chr5_2:50883798-50883817	None:intergenic	40.0%
	GAACGATAGATTCAAGTGAC+AGG	-	chr5_2:50883812-50883831	None:intergenic	40.0%
	CACAATGAGGGAACGAATAT+TGG	-	chr5_2:50883868-50883887	None:intergenic	40.0%
	CAATATTCGTTCCCTCATTG+TGG	+	chr5_2:50883866-50883885	Msa0774540:intron	40.0%
!	CCCTCATTGTGGATTATTGT+TGG	+	chr5_2:50883877-50883896	Msa0774540:intron	40.0%
	CCCAACAATAATCCACAATG+AGG	-	chr5_2:50883881-50883900	None:intergenic	40.0%
!	TGTTGGGAACACCTTTCTTT+TGG	+	chr5_2:50883894-50883913	Msa0774540:intron	40.0%
!	TATCAATTCTGCCCGGTTTT+GGG	-	chr5_2:50883934-50883953	None:intergenic	40.0%
	CTCATTCTATCAATTCTGCC+CGG	-	chr5_2:50883941-50883960	None:intergenic	40.0%
	TATTGTGAAGGGAAAACCCT+TGG	-	chr5_2:50884021-50884040	None:intergenic	40.0%
	GAGTAGTGACTCTATTGTGA+AGG	-	chr5_2:50884033-50884052	None:intergenic	40.0%
	GCAAAACAACCTTATCCTCA+AGG	+	chr5_2:50884191-50884210	Msa0774540:intron	40.0%
	CAGTGCATAATTGCAGAAGT+TGG	-	chr5_2:50884446-50884465	None:intergenic	40.0%
!!	AGGTGATGGGTCTAATTCAA+TGG	-	chr5_2:50884531-50884550	None:intergenic	40.0%
	ACAACCTTCTCCAAAGATCT+TGG	-	chr5_2:50884622-50884641	None:intergenic	40.0%
	ACTGCAAAATGGCAAGTTAG+AGG	-	chr5_2:50884646-50884665	None:intergenic	40.0%
	ACCTTGTTGGAACTGCAAAA+TGG	-	chr5_2:50884657-50884676	None:intergenic	40.0%
	CACAAAGCTTCCTATGAAGA+GGG	+	chr5_2:50884837-50884856	Msa0774540:intron	40.0%
	ACAAAGCTTCCTATGAAGAG+GGG	+	chr5_2:50884838-50884857	Msa0774540:intron	40.0%
	AATTTCATCCCCCTCTTCAT+AGG	-	chr5_2:50884850-50884869	None:intergenic	40.0%
!	GAAGAGGGGGATGAAATTTT+TGG	+	chr5_2:50884852-50884871	Msa0774540:intron	40.0%
	CATGATAAGGTGATGCATCA+AGG	-	chr5_2:50884992-50885011	None:intergenic	40.0%
	GAGCAGTTCAAACTTATGGT+TGG	+	chr5_2:50885250-50885269	Msa0774540:CDS	40.0%
	CTATAGTTACAGGCTTACAG+GGG	+	chr5_2:50885544-50885563	Msa0774540:three_prime_UTR	40.0%
	ACCTCCATTGTAACCATGAA+TGG	+	chr5_2:50885577-50885596	Msa0774540:three_prime_UTR	40.0%
	ACCATTCATGGTTACAATGG+AGG	-	chr5_2:50885581-50885600	None:intergenic	40.0%
	GATGGAGCTTATACCATTCA+TGG	-	chr5_2:50885593-50885612	None:intergenic	40.0%
	GTCTGTCTGTACTAGAATGA+TGG	-	chr5_2:50885611-50885630	None:intergenic	40.0%
	CATTCTAGTACAGACAGACA+TGG	+	chr5_2:50885612-50885631	Msa0774540:three_prime_UTR	40.0%
	TAGAAAATGCTGCTATCTCC+TGG	+	chr5_2:50885847-50885866	Msa0774540:three_prime_UTR	40.0%
	AGAAAATGCTGCTATCTCCT+GGG	+	chr5_2:50885848-50885867	Msa0774540:three_prime_UTR	40.0%
!	GGTCCCTTGAAATTTTCTCG+CGG	+	chr5_2:50881862-50881881	Msa0774540:intron	45.0%
	GGACCGCGAGAAAATTTCAA+GGG	-	chr5_2:50881868-50881887	None:intergenic	45.0%
	TGGACCGCGAGAAAATTTCA+AGG	-	chr5_2:50881869-50881888	None:intergenic	45.0%
	TAGTTGAGGTCGCATCACAT+TGG	-	chr5_2:50881985-50882004	None:intergenic	45.0%
	ATGTGATGCGACCTCAACTA+TGG	+	chr5_2:50881985-50882004	Msa0774540:intron	45.0%
	ATTTAGGCCAAAACCTCCTC+CGG	-	chr5_2:50882041-50882060	None:intergenic	45.0%
!	AGTTGATACACCAGGAACAG+TGG	+	chr5_2:50882288-50882307	Msa0774540:intron	45.0%
	TGTTTGCAGATTTGCGACTG+TGG	-	chr5_2:50882368-50882387	None:intergenic	45.0%
	GTAGTGTAGTGAAGAGACAG+TGG	+	chr5_2:50882390-50882409	Msa0774540:intron	45.0%
	TAGTGAAGAGACAGTGGAGA+GGG	+	chr5_2:50882396-50882415	Msa0774540:intron	45.0%
!!	ATTATCATTTTGGGGGGTGG+GGG	+	chr5_2:50882494-50882513	Msa0774540:intron	45.0%
	TCGAGTTCGAATCTCCACTT+AGG	-	chr5_2:50882542-50882561	None:intergenic	45.0%
	GAATCCTAACAAGGACCAAG+CGG	+	chr5_2:50882812-50882831	Msa0774540:CDS	45.0%
!!	TTGGTGAATTTTGGGGAGTG+TGG	+	chr5_2:50882894-50882913	Msa0774540:CDS	45.0%
!!	GAATTTTGGGGAGTGTGGTT+TGG	+	chr5_2:50882899-50882918	Msa0774540:CDS	45.0%
	GCATCACTGGGATCATTTCA+AGG	+	chr5_2:50882924-50882943	Msa0774540:CDS	45.0%
	AGTATGGGCTTCCATCACAA+TGG	+	chr5_2:50883136-50883155	Msa0774540:CDS	45.0%
	AAGATGAGGGGACAACATAC+TGG	-	chr5_2:50883511-50883530	None:intergenic	45.0%
	AGTATGTTGTCCCCTCATCT+TGG	+	chr5_2:50883510-50883529	Msa0774540:intron	45.0%
	GTATGTTGTCCCCTCATCTT+GGG	+	chr5_2:50883511-50883530	Msa0774540:intron	45.0%
!	CTATCAATTCTGCCCGGTTT+TGG	-	chr5_2:50883935-50883954	None:intergenic	45.0%
	CGGGCAGAATTGATAGAATG+AGG	+	chr5_2:50883939-50883958	Msa0774540:intron	45.0%
	AGGAGATAATCTCTCCTCCA+AGG	+	chr5_2:50884001-50884020	Msa0774540:intron	45.0%
	GGAGATAATCTCTCCTCCAA+GGG	+	chr5_2:50884002-50884021	Msa0774540:intron	45.0%
	CCTTCATTAGCAACAGCAGT+GGG	-	chr5_2:50884374-50884393	None:intergenic	45.0%
	TCCTTCATTAGCAACAGCAG+TGG	-	chr5_2:50884375-50884394	None:intergenic	45.0%
	GGGAAAGGAAGTTAGGTGAT+GGG	-	chr5_2:50884544-50884563	None:intergenic	45.0%
	TGGGAAAGGAAGTTAGGTGA+TGG	-	chr5_2:50884545-50884564	None:intergenic	45.0%
!	TGTGCCAAGATCTTTGGAGA+AGG	+	chr5_2:50884615-50884634	Msa0774540:intron	45.0%
!!	GCCATTTTGCAGTTCCAACA+AGG	+	chr5_2:50884653-50884672	Msa0774540:intron	45.0%
	TCTTGATCTGCTCCATGTCA+GGG	+	chr5_2:50884676-50884695	Msa0774540:intron	45.0%
	GCACAAAGCTTCCTATGAAG+AGG	+	chr5_2:50884836-50884855	Msa0774540:intron	45.0%
	CAAAGCTTCCTATGAAGAGG+GGG	+	chr5_2:50884839-50884858	Msa0774540:intron	45.0%
	GGTATCATGCATATGGCCAA+TGG	-	chr5_2:50885106-50885125	None:intergenic	45.0%
	GACTGCTGCATTAAAGTGTG+AGG	+	chr5_2:50885216-50885235	Msa0774540:CDS	45.0%
	TGGTGATCGATTATCAGCTG+AGG	+	chr5_2:50885270-50885289	Msa0774540:CDS	45.0%
	CACAAATTGGCCACAACTCT+TGG	+	chr5_2:50885364-50885383	Msa0774540:three_prime_UTR	45.0%
!!!	TAATTTTATGTTTTTTTAAT+AGG	+	chr5_2:50882451-50882470	Msa0774540:intron	5.0%
!!!	AATTTTATGTTTTTTTAATA+GGG	+	chr5_2:50882452-50882471	Msa0774540:intron	5.0%
!!!	TATTATTATTATTATCATTT+TGG	+	chr5_2:50882484-50882503	Msa0774540:intron	5.0%
!!!	ATTATTATTATTATCATTTT+GGG	+	chr5_2:50882485-50882504	Msa0774540:intron	5.0%
	AGAAGCGAACAAACCTGGAG+TGG	-	chr5_2:50881686-50881705	None:intergenic	50.0%
	CTGTAACGCGACCATAGTTG+AGG	-	chr5_2:50881999-50882018	None:intergenic	50.0%
	TCGCAGAGATATCGAGAACC+CGG	+	chr5_2:50882019-50882038	Msa0774540:intron	50.0%
	TTTAGGCCAAAACCTCCTCC+GGG	-	chr5_2:50882040-50882059	None:intergenic	50.0%
	TACACAGACTCCACTGTTCC+TGG	-	chr5_2:50882301-50882320	None:intergenic	50.0%
	TGGCACAAACTGCTTAGCTG+TGG	-	chr5_2:50882348-50882367	None:intergenic	50.0%
	GTAGTGAAGAGACAGTGGAG+AGG	+	chr5_2:50882395-50882414	Msa0774540:intron	50.0%
	AGTGAAGAGACAGTGGAGAG+GGG	+	chr5_2:50882397-50882416	Msa0774540:intron	50.0%
!!	GGGTTCTAGGAAAAGGGTGA+TGG	+	chr5_2:50882752-50882771	Msa0774540:intron	50.0%
	TAATAGAATCACCCGCCGCT+TGG	-	chr5_2:50882830-50882849	None:intergenic	50.0%
!	TGTGGTTTGGCTGCATCACT+GGG	+	chr5_2:50882912-50882931	Msa0774540:CDS	50.0%
	TGTGAAGGGAAAACCCTTGG+AGG	-	chr5_2:50884018-50884037	None:intergenic	50.0%
!!	GTTGTTTTGCGGACGAGTGA+CGG	-	chr5_2:50884181-50884200	None:intergenic	50.0%
	TTCGTCAAGCTCTCAGCAGT+AGG	-	chr5_2:50884288-50884307	None:intergenic	50.0%
	CCCACTGCTGTTGCTAATGA+AGG	+	chr5_2:50884371-50884390	Msa0774540:intron	50.0%
	AATCATTCCCAAGCGCCACA+TGG	+	chr5_2:50884396-50884415	Msa0774540:intron	50.0%
	ATCATTCCCAAGCGCCACAT+GGG	+	chr5_2:50884397-50884416	Msa0774540:intron	50.0%
	AACTTTCCCATGTGGCGCTT+GGG	-	chr5_2:50884406-50884425	None:intergenic	50.0%
	TCCAGCTGAACTTTCCCATG+TGG	-	chr5_2:50884414-50884433	None:intergenic	50.0%
	CTCCAAAGATCTTGGCACAG+CGG	-	chr5_2:50884614-50884633	None:intergenic	50.0%
	GGAGCAGATCAAGACCTTGT+TGG	-	chr5_2:50884670-50884689	None:intergenic	50.0%
	GTCTTGATCTGCTCCATGTC+AGG	+	chr5_2:50884675-50884694	Msa0774540:intron	50.0%
	TTACAGGCTTACAGGGGACA+TGG	+	chr5_2:50885550-50885569	Msa0774540:three_prime_UTR	50.0%
!	GAGAGCGCAGAGAGAGACAA+AGG	-	chr5_2:50881634-50881653	None:intergenic	55.0%
	GAGTGGAGAATCGCACAACC+TGG	-	chr5_2:50881669-50881688	None:intergenic	55.0%
	GTTGTGCGATTCTCCACTCC+AGG	+	chr5_2:50881670-50881689	Msa0774540:five_prime_UTR	55.0%
	CAGAGATATCGAGAACCCGG+AGG	+	chr5_2:50882022-50882041	Msa0774540:intron	55.0%
	AGATATCGAGAACCCGGAGG+AGG	+	chr5_2:50882025-50882044	Msa0774540:intron	55.0%
!!	ATAGCTGTTTTGTCCCGCGC+AGG	+	chr5_2:50882322-50882341	Msa0774540:intron	55.0%
	GTGAAGAGACAGTGGAGAGG+GGG	+	chr5_2:50882398-50882417	Msa0774540:intron	55.0%
	TCCTAACAAGGACCAAGCGG+CGG	+	chr5_2:50882815-50882834	Msa0774540:CDS	55.0%
!	GTGTGGTTTGGCTGCATCAC+TGG	+	chr5_2:50882911-50882930	Msa0774540:CDS	55.0%
	CGGACGAGTGACGGTGTAAT+GGG	-	chr5_2:50884172-50884191	None:intergenic	55.0%
	TCTCAGCAGTAGGCTCCATG+AGG	-	chr5_2:50884278-50884297	None:intergenic	55.0%
!	GGACGACTGGGATCTGAAGT+TGG	-	chr5_2:50884327-50884346	None:intergenic	55.0%
!	GCAAGTGCTGCAGCAAACTG+CGG	-	chr5_2:50884348-50884367	None:intergenic	55.0%
	GAACTTTCCCATGTGGCGCT+TGG	-	chr5_2:50884407-50884426	None:intergenic	55.0%
	GCCACATGGGAAAGTTCAGC+TGG	+	chr5_2:50884410-50884429	Msa0774540:intron	55.0%
	TGCCGCTGTGCCAAGATCTT+TGG	+	chr5_2:50884609-50884628	Msa0774540:intron	55.0%
	CTCGCACACATACATTGCCC+AGG	-	chr5_2:50885868-50885887	None:intergenic	55.0%
!	CGAGAACCCGGAGGAGGTTT+TGG	+	chr5_2:50882031-50882050	Msa0774540:intron	60.0%
!!	TCATTTTGGGGGGTGGGGGT+TGG	+	chr5_2:50882498-50882517	Msa0774540:intron	60.0%
	CCTAACAAGGACCAAGCGGC+GGG	+	chr5_2:50882816-50882835	Msa0774540:CDS	60.0%
	GCGGACGAGTGACGGTGTAA+TGG	-	chr5_2:50884173-50884192	None:intergenic	60.0%
	GCAGCAAACTGCGGACGACT+GGG	-	chr5_2:50884339-50884358	None:intergenic	60.0%
	TGCAGCAAACTGCGGACGAC+TGG	-	chr5_2:50884340-50884359	None:intergenic	60.0%
	CCTCAGCAGAGTCCCTGACA+TGG	-	chr5_2:50884691-50884710	None:intergenic	60.0%
	CCATGTCAGGGACTCTGCTG+AGG	+	chr5_2:50884688-50884707	Msa0774540:intron	60.0%
	GCTCTCGTTCGCTCTCGTCC+AGG	+	chr5_2:50881648-50881667	Msa0774540:five_prime_UTR	65.0%
	TGCTTAGCTGTGGCCTGCGC+GGG	-	chr5_2:50882338-50882357	None:intergenic	65.0%
	CTGCTTAGCTGTGGCCTGCG+CGG	-	chr5_2:50882339-50882358	None:intergenic	65.0%
!	CAGTGGAGAGGGGGTACGAG+TGG	+	chr5_2:50882407-50882426	Msa0774540:intron	65.0%
!!	TTTTGGGGGGTGGGGGTTGG+TGG	+	chr5_2:50882501-50882520	Msa0774540:intron	65.0%
	CCCGCCGCTTGGTCCTTGTT+AGG	-	chr5_2:50882819-50882838	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	50881614	50885930	50881614	ID=Msa0774540;Name=Msa0774540
chr5_2	mRNA	50881614	50885930	50881614	ID=Msa0774540-mRNA-1;Parent=Msa0774540;Name=Msa0774540-mRNA-1;_AED=0.17;_eAED=0.17;_QI=88\|1\|1\|1\|0.33\|0.5\|4\|585\|153
chr5_2	exon	50881614	50881691	50881614	ID=Msa0774540-mRNA-1:exon:15111;Parent=Msa0774540-mRNA-1
chr5_2	exon	50882761	50882945	50882761	ID=Msa0774540-mRNA-1:exon:15112;Parent=Msa0774540-mRNA-1
chr5_2	exon	50883072	50883209	50883072	ID=Msa0774540-mRNA-1:exon:15113;Parent=Msa0774540-mRNA-1
chr5_2	exon	50885197	50885930	50885197	ID=Msa0774540-mRNA-1:exon:15114;Parent=Msa0774540-mRNA-1
chr5_2	five_prime_UTR	50881614	50881691	50881614	ID=Msa0774540-mRNA-1:five_prime_utr;Parent=Msa0774540-mRNA-1
chr5_2	five_prime_UTR	50882761	50882770	50882761	ID=Msa0774540-mRNA-1:five_prime_utr;Parent=Msa0774540-mRNA-1
chr5_2	CDS	50882771	50882945	50882771	ID=Msa0774540-mRNA-1:cds;Parent=Msa0774540-mRNA-1
chr5_2	CDS	50883072	50883209	50883072	ID=Msa0774540-mRNA-1:cds;Parent=Msa0774540-mRNA-1
chr5_2	CDS	50885197	50885345	50885197	ID=Msa0774540-mRNA-1:cds;Parent=Msa0774540-mRNA-1
chr5_2	three_prime_UTR	50885346	50885930	50885346	ID=Msa0774540-mRNA-1:three_prime_utr;Parent=Msa0774540-mRNA-1

Gene Sequence

>Msa0774540

ATGGTGTTCAAAAACAGATACATGGTGATGGAGGTTTTTATGAATCCTAACAAGGACCAAGCGGCGGGTGATTCTATTATAATTACGCAGTTTAATGTCTCCAATGCTATAAAAGATAGCATCTTGGTGAATTTTGGGGAGTGTGGTTTGGCTGCATCACTGGGATCATTTCAAGTCAAGTATGTGAATCCAATCACTAATGTGTGCATCATTAGGGCTTCAAGAGAAGAGTATGAAAAAGTATGGGCTTCCATCACAATGGTCAGAAGTATTGGAAATTTCCCAGTTGTGTTTAATTTGCTTGATTTATCTGGAAATTTACAGGCTACTAAGACTGCTGCATTAAAGTGTGAGGAAGCAAAATTTGAGCAGTTCAAACTTATGGTTGGTGATCGATTATCAGCTGAGGATACACATCGCATGAATAATCATCTTGCTAAGATCGAAGTTTTGGAGCATTGA

Protein sequence

>Msa0774540

MVFKNRYMVMEVFMNPNKDQAAGDSIIITQFNVSNAIKDSILVNFGECGLAASLGSFQVKYVNPITNVCIIRASREEYEKVWASITMVRSIGNFPVVFNLLDLSGNLQATKTAALKCEEAKFEQFKLMVGDRLSAEDTHRMNNHLAKIEVLEH*