Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235740 | XP_013444523.1 | 85.433 | 254 | 15 | 4 | 20 | 255 | 46 | 295 | 4.33e-144 | 418 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235740 | A0A072TNX3 | 85.433 | 254 | 15 | 4 | 20 | 255 | 46 | 295 | 2.07e-144 | 418 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1235740 | 0.818745 | 1.669534e-52 | -8.615850e-47 |
| Msa0011660 | Msa1235740 | -0.828819 | 7.270782e-55 | -8.615850e-47 |
| Msa0018620 | Msa1235740 | 0.806973 | 6.340244e-50 | -8.615850e-47 |
| Msa0026430 | Msa1235740 | 0.810450 | 1.145906e-50 | -8.615850e-47 |
| Msa0031340 | Msa1235740 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
| Msa0037880 | Msa1235740 | 0.809315 | 2.010943e-50 | -8.615850e-47 |
| Msa0051630 | Msa1235740 | 0.810443 | 1.149840e-50 | -8.615850e-47 |
| Msa0051750 | Msa1235740 | 0.820622 | 6.223853e-53 | -8.615850e-47 |
| Msa0054480 | Msa1235740 | 0.814093 | 1.836320e-51 | -8.615850e-47 |
| Msa0071380 | Msa1235740 | -0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa0076000 | Msa1235740 | 0.802326 | 5.916261e-49 | -8.615850e-47 |
| Msa0089360 | Msa1235740 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0092990 | Msa1235740 | 0.807117 | 5.912582e-50 | -8.615850e-47 |
| Msa0100000 | Msa1235740 | 0.839247 | 1.776468e-57 | -8.615850e-47 |
| Msa0101810 | Msa1235740 | -0.816216 | 6.199041e-52 | -8.615850e-47 |
| Msa0625720 | Msa1235740 | 0.800429 | 1.447323e-48 | -8.615850e-47 |
| Msa0638070 | Msa1235740 | 0.819542 | 1.099421e-52 | -8.615850e-47 |
| Msa0647980 | Msa1235740 | 0.809113 | 2.221574e-50 | -8.615850e-47 |
| Msa0662650 | Msa1235740 | 0.803011 | 4.273041e-49 | -8.615850e-47 |
| Msa0679290 | Msa1235740 | -0.810681 | 1.021427e-50 | -8.615850e-47 |
| Msa0689260 | Msa1235740 | 0.810304 | 1.231771e-50 | -8.615850e-47 |
| Msa0708860 | Msa1235740 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
| Msa0709160 | Msa1235740 | 0.803295 | 3.732607e-49 | -8.615850e-47 |
| Msa0711780 | Msa1235740 | 0.803716 | 3.052349e-49 | -8.615850e-47 |
| Msa0711890 | Msa1235740 | 0.806682 | 7.306879e-50 | -8.615850e-47 |
| Msa0715470 | Msa1235740 | 0.823577 | 1.285135e-53 | -8.615850e-47 |
| Msa0715700 | Msa1235740 | 0.809975 | 1.450476e-50 | -8.615850e-47 |
| Msa0731940 | Msa1235740 | 0.801850 | 7.413401e-49 | -8.615850e-47 |
| Msa0743720 | Msa1235740 | 0.810799 | 9.631782e-51 | -8.615850e-47 |
| Msa0745790 | Msa1235740 | 0.817774 | 2.769246e-52 | -8.615850e-47 |
| Msa0750170 | Msa1235740 | 0.810123 | 1.347847e-50 | -8.615850e-47 |
| Msa0753720 | Msa1235740 | 0.800483 | 1.411143e-48 | -8.615850e-47 |
| Msa0762970 | Msa1235740 | 0.816687 | 4.864677e-52 | -8.615850e-47 |
| Msa0777570 | Msa1235740 | -0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0784380 | Msa1235740 | 0.817584 | 3.056675e-52 | -8.615850e-47 |
| Msa0790660 | Msa1235740 | -0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0793800 | Msa1235740 | 0.812473 | 4.165257e-51 | -8.615850e-47 |
| Msa0794670 | Msa1235740 | 0.811296 | 7.516602e-51 | -8.615850e-47 |
| Msa0794730 | Msa1235740 | 0.820726 | 5.888988e-53 | -8.615850e-47 |
| Msa0827040 | Msa1235740 | 0.800558 | 1.362490e-48 | -8.615850e-47 |
| Msa0147250 | Msa1235740 | 0.806559 | 7.757254e-50 | -8.615850e-47 |
| Msa0149000 | Msa1235740 | 0.825901 | 3.639467e-54 | -8.615850e-47 |
| Msa0150800 | Msa1235740 | 0.834071 | 3.703913e-56 | -8.615850e-47 |
| Msa0157100 | Msa1235740 | 0.803017 | 4.260238e-49 | -8.615850e-47 |
| Msa0205230 | Msa1235740 | 0.808686 | 2.741605e-50 | -8.615850e-47 |
| Msa0205510 | Msa1235740 | 0.803065 | 4.163945e-49 | -8.615850e-47 |
| Msa0228070 | Msa1235740 | 0.803074 | 4.145706e-49 | -8.615850e-47 |
| Msa0237230 | Msa1235740 | 0.807348 | 5.281399e-50 | -8.615850e-47 |
| Msa1228620 | Msa1235740 | -0.801034 | 1.089451e-48 | -8.615850e-47 |
| Msa1231240 | Msa1235740 | 0.848533 | 5.769149e-60 | -8.615850e-47 |
| Msa1235740 | Msa1237940 | 0.803515 | 3.359810e-49 | -8.615850e-47 |
| Msa1235740 | Msa1238930 | 0.815498 | 8.962525e-52 | -8.615850e-47 |
| Msa1235740 | Msa1259490 | -0.803628 | 3.183681e-49 | -8.615850e-47 |
| Msa1235740 | Msa1277660 | 0.811910 | 5.528201e-51 | -8.615850e-47 |
| Msa1235740 | Msa1279210 | 0.801875 | 7.325304e-49 | -8.615850e-47 |
| Msa1235740 | Msa1299180 | -0.818783 | 1.636877e-52 | -8.615850e-47 |
| Msa1235740 | Msa1303250 | 0.805434 | 1.337200e-49 | -8.615850e-47 |
| Msa1235740 | Msa1311960 | 0.802932 | 4.436229e-49 | -8.615850e-47 |
| Msa1235740 | Msa1331920 | 0.803870 | 2.836128e-49 | -8.615850e-47 |
| Msa1235740 | Msa1336570 | 0.807664 | 4.526904e-50 | -8.615850e-47 |
| Msa1235740 | Msa1336710 | 0.817406 | 3.352065e-52 | -8.615850e-47 |
| Msa1235740 | Msa1346370 | 0.825010 | 5.917105e-54 | -8.615850e-47 |
| Msa1235740 | Msa1349520 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa1235740 | Msa1351550 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa1235740 | Msa1353060 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa1235740 | Msa1353470 | 0.843759 | 1.149658e-58 | -8.615850e-47 |
| Msa1235740 | Msa1356440 | 0.811338 | 7.360654e-51 | -8.615850e-47 |
| Msa1235740 | Msa1358250 | 0.808229 | 3.432068e-50 | -8.615850e-47 |
| Msa1235740 | Msa1359040 | 0.811265 | 7.634114e-51 | -8.615850e-47 |
| Msa1235740 | Msa1385460 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
| Msa1235740 | Msa1385670 | 0.802496 | 5.456813e-49 | -8.615850e-47 |
| Msa1235740 | Msa1392260 | 0.804686 | 1.917652e-49 | -8.615850e-47 |
| Msa1235740 | Msa1392780 | 0.804801 | 1.814680e-49 | -8.615850e-47 |
| Msa1235740 | Msa1394730 | 0.826046 | 3.362431e-54 | -8.615850e-47 |
| Msa1235740 | Msa1408010 | 0.803344 | 3.646017e-49 | -8.615850e-47 |
| Msa1235740 | Msa1410100 | 0.807187 | 5.714528e-50 | -8.615850e-47 |
| Msa1235740 | Msa1410470 | 0.809832 | 1.556977e-50 | -8.615850e-47 |
| Msa1235740 | Msa1416390 | 0.818491 | 1.906822e-52 | -8.615850e-47 |
| Msa1235740 | Msa1423350 | 0.806335 | 8.646141e-50 | -8.615850e-47 |
| Msa1235740 | Msa1439960 | 0.801011 | 1.101137e-48 | -8.615850e-47 |
| Msa1235740 | Msa1444310 | 0.804020 | 2.639202e-49 | -8.615850e-47 |
| Msa1235740 | Msa1454620 | 0.809209 | 2.119097e-50 | -8.615850e-47 |
| Msa1235740 | Msa1457920 | 0.805233 | 1.473714e-49 | -8.615850e-47 |
| Msa1235740 | Msa1461300 | 0.814899 | 1.218050e-51 | -8.615850e-47 |
| Msa1235740 | Msa1466540 | 0.806580 | 7.677650e-50 | -8.615850e-47 |
| Msa0366240 | Msa1235740 | 0.830634 | 2.629480e-55 | -8.615850e-47 |
| Msa0381400 | Msa1235740 | 0.804134 | 2.498790e-49 | -8.615850e-47 |
| Msa0395790 | Msa1235740 | 0.800165 | 1.637681e-48 | -8.615850e-47 |
| Msa0426900 | Msa1235740 | 0.807286 | 5.445271e-50 | -8.615850e-47 |
| Msa0431670 | Msa1235740 | 0.816985 | 4.170215e-52 | -8.615850e-47 |
| Msa0438200 | Msa1235740 | 0.822781 | 1.971132e-53 | -8.615850e-47 |
| Msa0466390 | Msa1235740 | 0.806244 | 9.038387e-50 | -8.615850e-47 |
| Msa0481530 | Msa1235740 | 0.801326 | 9.493632e-49 | -8.615850e-47 |
| Msa0990960 | Msa1235740 | 0.810099 | 1.364019e-50 | -8.615850e-47 |
| Msa0999100 | Msa1235740 | 0.831441 | 1.666863e-55 | -8.615850e-47 |
| Msa1001390 | Msa1235740 | 0.800369 | 1.488814e-48 | -8.615850e-47 |
| Msa1013400 | Msa1235740 | 0.818340 | 2.063194e-52 | -8.615850e-47 |
| Msa1036440 | Msa1235740 | 0.814235 | 1.708159e-51 | -8.615850e-47 |
| Msa1039880 | Msa1235740 | 0.806110 | 9.642742e-50 | -8.615850e-47 |
| Msa1046300 | Msa1235740 | 0.801417 | 9.092440e-49 | -8.615850e-47 |
| Msa1063510 | Msa1235740 | 0.813225 | 2.850313e-51 | -8.615850e-47 |
| Msa1075540 | Msa1235740 | 0.802927 | 4.447159e-49 | -8.615850e-47 |
| Msa1082500 | Msa1235740 | 0.816527 | 5.281595e-52 | -8.615850e-47 |
| Msa1085300 | Msa1235740 | 0.800704 | 1.272096e-48 | -8.615850e-47 |
| Msa1093530 | Msa1235740 | 0.814711 | 1.340347e-51 | -8.615850e-47 |
| Msa1100050 | Msa1235740 | 0.809763 | 1.611316e-50 | -8.615850e-47 |
| Msa0241190 | Msa1235740 | 0.809093 | 2.244030e-50 | -8.615850e-47 |
| Msa0245940 | Msa1235740 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0257460 | Msa1235740 | 0.807956 | 3.922653e-50 | -8.615850e-47 |
| Msa0259370 | Msa1235740 | 0.809121 | 2.212765e-50 | -8.615850e-47 |
| Msa0264150 | Msa1235740 | 0.808171 | 3.530726e-50 | -8.615850e-47 |
| Msa0269450 | Msa1235740 | 0.805336 | 1.402358e-49 | -8.615850e-47 |
| Msa0270100 | Msa1235740 | 0.808491 | 3.017821e-50 | -8.615850e-47 |
| Msa0271530 | Msa1235740 | 0.857023 | 2.165034e-62 | -8.615850e-47 |
| Msa0275000 | Msa1235740 | 0.806816 | 6.844963e-50 | -8.615850e-47 |
| Msa0279790 | Msa1235740 | 0.801709 | 7.921376e-49 | -8.615850e-47 |
| Msa0284520 | Msa1235740 | 0.809161 | 2.169738e-50 | -8.615850e-47 |
| Msa0287650 | Msa1235740 | 0.806791 | 6.929155e-50 | -8.615850e-47 |
| Msa0288100 | Msa1235740 | 0.809124 | 2.209302e-50 | -8.615850e-47 |
| Msa0319170 | Msa1235740 | 0.822749 | 2.004900e-53 | -8.615850e-47 |
| Msa0320740 | Msa1235740 | 0.801346 | 9.403441e-49 | -8.615850e-47 |
| Msa0336040 | Msa1235740 | -0.806141 | 9.502503e-50 | -8.615850e-47 |
| Msa0337620 | Msa1235740 | 0.802654 | 5.062278e-49 | -8.615850e-47 |
| Msa0339250 | Msa1235740 | 0.809573 | 1.770326e-50 | -8.615850e-47 |
| Msa0342100 | Msa1235740 | 0.832180 | 1.095322e-55 | -8.615850e-47 |
| Msa0350990 | Msa1235740 | 0.817558 | 3.098574e-52 | -8.615850e-47 |
| Msa0351030 | Msa1235740 | 0.825635 | 4.209690e-54 | -8.615850e-47 |
| Msa0351080 | Msa1235740 | 0.802543 | 5.338477e-49 | -8.615850e-47 |
| Msa0351100 | Msa1235740 | 0.816912 | 4.329609e-52 | -8.615850e-47 |
| Msa0351810 | Msa1235740 | 0.817981 | 2.487171e-52 | -8.615850e-47 |
| Msa0359030 | Msa1235740 | 0.827545 | 1.474565e-54 | -8.615850e-47 |
| Msa1109680 | Msa1235740 | 0.805356 | 1.388580e-49 | -8.615850e-47 |
| Msa1118110 | Msa1235740 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
| Msa1119480 | Msa1235740 | 0.826367 | 2.820779e-54 | -8.615850e-47 |
| Msa1119540 | Msa1235740 | 0.800796 | 1.218044e-48 | -8.615850e-47 |
| Msa1135470 | Msa1235740 | 0.805268 | 1.449126e-49 | -8.615850e-47 |
| Msa1137570 | Msa1235740 | 0.811987 | 5.316578e-51 | -8.615850e-47 |
| Msa1144390 | Msa1235740 | 0.800915 | 1.151858e-48 | -8.615850e-47 |
| Msa1147900 | Msa1235740 | 0.822588 | 2.186298e-53 | -8.615850e-47 |
| Msa1154280 | Msa1235740 | 0.824187 | 9.246978e-54 | -8.615850e-47 |
| Msa1162780 | Msa1235740 | 0.810200 | 1.297421e-50 | -8.615850e-47 |
| Msa1172670 | Msa1235740 | 0.802069 | 6.681781e-49 | -8.615850e-47 |
| Msa1179460 | Msa1235740 | 0.830140 | 3.473087e-55 | -8.615850e-47 |
| Msa1186950 | Msa1235740 | -0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa1187840 | Msa1235740 | 0.806434 | 8.240373e-50 | -8.615850e-47 |
| Msa1193290 | Msa1235740 | 0.835535 | 1.585783e-56 | -8.615850e-47 |
| Msa1201560 | Msa1235740 | 0.800946 | 1.135453e-48 | -8.615850e-47 |
| Msa1207270 | Msa1235740 | 0.808437 | 3.099163e-50 | -8.615850e-47 |
| Msa1214880 | Msa1235740 | 0.806016 | 1.009430e-49 | -8.615850e-47 |
| Msa1214890 | Msa1235740 | 0.800255 | 1.570191e-48 | -8.615850e-47 |
| Msa1217860 | Msa1235740 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa1221050 | Msa1235740 | 0.803348 | 3.639528e-49 | -8.615850e-47 |
| Msa0484780 | Msa1235740 | 0.815044 | 1.130753e-51 | -8.615850e-47 |
| Msa0489100 | Msa1235740 | 0.815106 | 1.095446e-51 | -8.615850e-47 |
| Msa0498650 | Msa1235740 | 0.819499 | 1.125039e-52 | -8.615850e-47 |
| Msa0512750 | Msa1235740 | 0.806201 | 9.230197e-50 | -8.615850e-47 |
| Msa0517090 | Msa1235740 | 0.810366 | 1.194721e-50 | -8.615850e-47 |
| Msa0529890 | Msa1235740 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0532710 | Msa1235740 | 0.800768 | 1.234486e-48 | -8.615850e-47 |
| Msa0545070 | Msa1235740 | 0.803249 | 3.814140e-49 | -8.615850e-47 |
| Msa0547320 | Msa1235740 | 0.817981 | 2.487443e-52 | -8.615850e-47 |
| Msa0547720 | Msa1235740 | 0.802451 | 5.576743e-49 | -8.615850e-47 |
| Msa0556100 | Msa1235740 | 0.816869 | 4.427300e-52 | -8.615850e-47 |
| Msa0557070 | Msa1235740 | 0.832438 | 9.452525e-56 | -8.615850e-47 |
| Msa0568820 | Msa1235740 | 0.805409 | 1.353559e-49 | -8.615850e-47 |
| Msa0861930 | Msa1235740 | 0.800345 | 1.505483e-48 | -8.615850e-47 |
| Msa0871270 | Msa1235740 | 0.803760 | 2.989116e-49 | -8.615850e-47 |
| Msa0876200 | Msa1235740 | 0.811813 | 5.802349e-51 | -8.615850e-47 |
| Msa0876580 | Msa1235740 | 0.802071 | 6.675074e-49 | -8.615850e-47 |
| Msa0896750 | Msa1235740 | 0.807331 | 5.325231e-50 | -8.615850e-47 |
| Msa0897080 | Msa1235740 | 0.803361 | 3.616443e-49 | -8.615850e-47 |
| Msa0898670 | Msa1235740 | 0.822916 | 1.833455e-53 | -8.615850e-47 |
| Msa0902760 | Msa1235740 | 0.813531 | 2.441674e-51 | -8.615850e-47 |
| Msa0908920 | Msa1235740 | -0.802332 | 5.899329e-49 | -8.615850e-47 |
| Msa0933310 | Msa1235740 | 0.807648 | 4.561190e-50 | -8.615850e-47 |
| Msa0936300 | Msa1235740 | 0.800966 | 1.124477e-48 | -8.615850e-47 |
| Msa0938220 | Msa1235740 | 0.822112 | 2.819843e-53 | -8.615850e-47 |
| Msa0970030 | Msa1235740 | 0.814352 | 1.609765e-51 | -8.615850e-47 |
| Msa0970420 | Msa1235740 | 0.802066 | 6.692880e-49 | -8.615850e-47 |
| Msa0970530 | Msa1235740 | 0.806125 | 9.572369e-50 | -8.615850e-47 |
| Msa0974070 | Msa1235740 | 0.812302 | 4.539397e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235740 | MtrunA17_Chr8g0345761 | 85.433 | 254 | 15 | 4 | 20 | 255 | 46 | 295 | 3.98e-148 | 418 |
| Msa1235740 | MtrunA17_Chr8g0347771 | 86.777 | 242 | 11 | 4 | 35 | 255 | 1 | 242 | 5.57e-140 | 395 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235740 | AT4G05400.1 | 50.397 | 252 | 91 | 7 | 35 | 255 | 1 | 249 | 1.81e-68 | 214 |
| Msa1235740 | AT4G05400.2 | 50.397 | 252 | 91 | 7 | 35 | 255 | 1 | 249 | 1.81e-68 | 214 |
| Msa1235740 | AT4G05400.3 | 50.397 | 252 | 91 | 7 | 35 | 255 | 1 | 249 | 1.81e-68 | 214 |
| Msa1235740 | AT4G21140.1 | 48.361 | 244 | 101 | 7 | 35 | 255 | 1 | 242 | 1.00e-55 | 181 |
Find 94 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCGTTAGCTATTGACTTC+TGG | 0.182334 | 8_2:-13929279 | Msa1235740:CDS |
| GTTTCCGGTGAATATGTTTA+TGG | 0.209095 | 8_2:-13931303 | Msa1235740:CDS |
| TTTCTCAGAAACCCTAAATT+TGG | 0.213177 | 8_2:+13931574 | None:intergenic |
| TGTAAACTTCTAAAGCTTCT+AGG | 0.266135 | 8_2:+13929086 | None:intergenic |
| TGTAAACTTCTAAAGCTTCT+AGG | 0.266135 | 8_2:+13929141 | None:intergenic |
| AGCTTCGCGTGCGCGTTGTT+TGG | 0.268618 | 8_2:+13931667 | None:intergenic |
| TTCTGAGAAACCAACGATAA+TGG | 0.292493 | 8_2:-13931561 | Msa1235740:CDS |
| TGCGTTAGCTATTGACTTCT+GGG | 0.302245 | 8_2:-13929278 | Msa1235740:CDS |
| TCCGGTTGGGGCTCCAGGTG+TGG | 0.303320 | 8_2:+13931766 | None:intergenic |
| GTTTCTCGCGGGATCCGGTT+GGG | 0.334744 | 8_2:+13931753 | None:intergenic |
| GCTTCGCGTGCGCGTTGTTT+GGG | 0.354593 | 8_2:+13931668 | None:intergenic |
| GGGTTTGAAGGAAGCTGCTT+TGG | 0.367116 | 8_2:-13931342 | Msa1235740:CDS |
| GGGTTGGATTATATAACGTT+AGG | 0.374908 | 8_2:-13931530 | Msa1235740:CDS |
| AATTCAGTGAAGTCATGTTT+AGG | 0.378457 | 8_2:+13929179 | None:intergenic |
| TCAGTGGGAAGGAGAAGATT+AGG | 0.382186 | 8_2:-13931220 | Msa1235740:intron |
| TGGGGCTCCAGGTGTGGGTT+CGG | 0.385988 | 8_2:+13931772 | None:intergenic |
| GAAGGAAGATGGGATGAAAT+TGG | 0.390189 | 8_2:-13931468 | Msa1235740:CDS |
| TCCTTTGGCGGTGCGGCTGA+CGG | 0.396279 | 8_2:+13931853 | None:intergenic |
| TTCTTGTTTCTCGCGGGATC+CGG | 0.402017 | 8_2:+13931748 | None:intergenic |
| GAGGCTATTGAAGCTTTGCC+TGG | 0.402944 | 8_2:-13931365 | Msa1235740:CDS |
| AGCATGGTTGAAACGTTCTT+AGG | 0.403554 | 8_2:+13931935 | None:intergenic |
| TCTGAGAAACCAACGATAAT+GGG | 0.408601 | 8_2:-13931560 | Msa1235740:CDS |
| TTACATTATTATGATTATAG+TGG | 0.413381 | 8_2:-13929068 | Msa1235740:three_prime_UTR |
| TTTCTCGCGGGATCCGGTTG+GGG | 0.418787 | 8_2:+13931754 | None:intergenic |
| GGATACTGGTTGTGAGTAAT+GGG | 0.424022 | 8_2:+13931998 | None:intergenic |
| AATTGGCCAAGGAGTATAGT+AGG | 0.424942 | 8_2:-13931451 | Msa1235740:CDS |
| ACGCTTACGCCGCCTATTGA+TGG | 0.425057 | 8_2:-13931278 | Msa1235740:CDS |
| TCCAGGTGTGGGTTCGGACC+CGG | 0.427457 | 8_2:+13931778 | None:intergenic |
| AGCCGCACCGCCAAAGGAAA+AGG | 0.428181 | 8_2:-13931848 | Msa1235740:CDS |
| AGTTTACATTATGATTATAG+TGG | 0.437138 | 8_2:-13929126 | Msa1235740:three_prime_UTR |
| CCGGTTGGGGCTCCAGGTGT+GGG | 0.437586 | 8_2:+13931767 | None:intergenic |
| ATAAACATATTCACCGGAAA+CGG | 0.439011 | 8_2:+13931305 | None:intergenic |
| CCCACACCTGGAGCCCCAAC+CGG | 0.442696 | 8_2:-13931767 | Msa1235740:CDS |
| TGGGTATATTGAGAAGATTA+AGG | 0.447659 | 8_2:-13931258 | Msa1235740:CDS |
| CGGAGCAGCGTTGGAGGAGT+TGG | 0.459479 | 8_2:+13931873 | None:intergenic |
| ACCGGGTCCGAACCCACACC+TGG | 0.460493 | 8_2:-13931779 | Msa1235740:CDS |
| TGCGGCTGACGGAGCAGCGT+TGG | 0.460867 | 8_2:+13931864 | None:intergenic |
| TATGAATTGACGAAGGAAGA+TGG | 0.461364 | 8_2:-13931479 | Msa1235740:CDS |
| AGATTAAGGAGGCTGCTGAT+AGG | 0.463125 | 8_2:-13931244 | Msa1235740:CDS |
| ACCGGAAACGGCGTAAAATC+CGG | 0.463153 | 8_2:+13931317 | None:intergenic |
| TCCTTCGTCAATTCATACTT+AGG | 0.464649 | 8_2:+13931485 | None:intergenic |
| AGGATACTGGTTGTGAGTAA+TGG | 0.468078 | 8_2:+13931997 | None:intergenic |
| TTCTCAATATACCCATCAAT+AGG | 0.469115 | 8_2:+13931266 | None:intergenic |
| GGTTGGATTATATAACGTTA+GGG | 0.470062 | 8_2:-13931529 | Msa1235740:CDS |
| GAAGGAAGCTGCTTTGGTGC+CGG | 0.473891 | 8_2:-13931336 | Msa1235740:CDS |
| GTAATGGGCCGGGTCGGTCC+AGG | 0.482703 | 8_2:+13932013 | None:intergenic |
| CCAACGATAATGGGAACCCC+TGG | 0.483698 | 8_2:-13931551 | Msa1235740:CDS |
| GGCTGACGGAGCAGCGTTGG+AGG | 0.488541 | 8_2:+13931867 | None:intergenic |
| TTCAGAAAACGAAGCGGTGT+TGG | 0.489336 | 8_2:+13931692 | None:intergenic |
| CCATAAGAAGCTATGGGTCC+TGG | 0.489839 | 8_2:-13932031 | None:intergenic |
| ATGAATTGACGAAGGAAGAT+GGG | 0.491364 | 8_2:-13931478 | Msa1235740:CDS |
| GGCTATTGAAGCTTTGCCTG+GGG | 0.503885 | 8_2:-13931363 | Msa1235740:CDS |
| CATTCAGATATTAGTAAGCC+AGG | 0.514997 | 8_2:-13929308 | Msa1235740:CDS |
| CCAGGGGTTCCCATTATCGT+TGG | 0.516292 | 8_2:+13931551 | None:intergenic |
| CGCTTACGCCGCCTATTGAT+GGG | 0.516719 | 8_2:-13931277 | Msa1235740:CDS |
| ACTGGTTGTGAGTAATGGGC+CGG | 0.519122 | 8_2:+13932002 | None:intergenic |
| TGCGAGAGTGAAGAGGATAC+TGG | 0.520534 | 8_2:+13931984 | None:intergenic |
| TCCGTCAGCCGCACCGCCAA+AGG | 0.523259 | 8_2:-13931854 | Msa1235740:CDS |
| GCCAAAGGAAAAGGAAAAGC+CGG | 0.524257 | 8_2:-13931839 | Msa1235740:intron |
| TTCGCGTTCTTGTTTCTCGC+GGG | 0.529856 | 8_2:+13931742 | None:intergenic |
| TAGCTAACGCAAGAGAAGCC+TGG | 0.537970 | 8_2:+13929290 | None:intergenic |
| AGGCTATTGAAGCTTTGCCT+GGG | 0.539955 | 8_2:-13931364 | Msa1235740:CDS |
| TAGCTTTGTGAGACGGAGCA+TGG | 0.544288 | 8_2:+13931919 | None:intergenic |
| CAAAACCCTACTATACTCCT+TGG | 0.553845 | 8_2:+13931445 | None:intergenic |
| GTTCGCGTTCTTGTTTCTCG+CGG | 0.563462 | 8_2:+13931741 | None:intergenic |
| CTATGGGTCCTGGACCGACC+CGG | 0.564577 | 8_2:-13932021 | Msa1235740:CDS |
| GATAATGGGAACCCCTGGGT+TGG | 0.575407 | 8_2:-13931546 | Msa1235740:CDS |
| ATTGGCCAAGGAGTATAGTA+GGG | 0.576553 | 8_2:-13931450 | Msa1235740:intron |
| CTGGTTGTGAGTAATGGGCC+GGG | 0.581298 | 8_2:+13932003 | None:intergenic |
| TTGTGAGTAATGGGCCGGGT+CGG | 0.588919 | 8_2:+13932007 | None:intergenic |
| AATGAAATGCGAGAGTGAAG+AGG | 0.594132 | 8_2:+13931977 | None:intergenic |
| ACGTTATATAATCCAACCCA+GGG | 0.597116 | 8_2:+13931534 | None:intergenic |
| GAAGCATAGGGCGAGACAAG+CGG | 0.597439 | 8_2:-13931417 | Msa1235740:intron |
| GCTATTGAAGCTTTGCCTGG+GGG | 0.597757 | 8_2:-13931362 | Msa1235740:CDS |
| TGCTGATAGGATCAGTGGGA+AGG | 0.607298 | 8_2:-13931231 | Msa1235740:CDS |
| GAGGCTGCTGATAGGATCAG+TGG | 0.610487 | 8_2:-13931236 | Msa1235740:CDS |
| AACGTTATATAATCCAACCC+AGG | 0.612178 | 8_2:+13931533 | None:intergenic |
| AGATGGGATGAAATTGGCCA+AGG | 0.616560 | 8_2:-13931462 | Msa1235740:CDS |
| CAACGATAATGGGAACCCCT+GGG | 0.617131 | 8_2:-13931550 | Msa1235740:CDS |
| AGGCTGCTGATAGGATCAGT+GGG | 0.618985 | 8_2:-13931235 | Msa1235740:CDS |
| GTCGTTGCGTAGCAGTACAT+AGG | 0.621497 | 8_2:+13929330 | None:intergenic |
| GTTGCCATAAACATATTCAC+CGG | 0.628444 | 8_2:+13931299 | None:intergenic |
| ATTTCTGCAAACTAGTCAGT+GGG | 0.630877 | 8_2:-13929254 | Msa1235740:CDS |
| TATTTCTGCAAACTAGTCAG+TGG | 0.635693 | 8_2:-13929255 | Msa1235740:CDS |
| GAAGCGGTGTTGGTGCGTTG+AGG | 0.638641 | 8_2:+13931702 | None:intergenic |
| CAGCGTTGGAGGAGTTGGTG+CGG | 0.641635 | 8_2:+13931878 | None:intergenic |
| GCATAGGGCGAGACAAGCGG+CGG | 0.658080 | 8_2:-13931414 | Msa1235740:CDS |
| CGTTGAGGCATTGATCGTAG+AGG | 0.672109 | 8_2:+13931717 | None:intergenic |
| GCCTAAGTATGAATTGACGA+AGG | 0.676673 | 8_2:-13931486 | Msa1235740:CDS |
| TCAATATACCCATCAATAGG+CGG | 0.683015 | 8_2:+13931269 | None:intergenic |
| GTATATTGAGAAGATTAAGG+AGG | 0.685736 | 8_2:-13931255 | Msa1235740:CDS |
| TTGGGTTTCAGAAAACGAAG+CGG | 0.712076 | 8_2:+13931686 | None:intergenic |
| TGGTGCGGTGAAGATGACGA+TGG | 0.730045 | 8_2:+13931893 | None:intergenic |
| CGTTATATAATCCAACCCAG+GGG | 0.774014 | 8_2:+13931535 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTGATGAAATTTCAT+TGG | - | chr8_2:13929999-13930018 | Msa1235740:intron | 15.0% |
| !!! | TTTTGAAATGAGAAATTTTA+GGG | + | chr8_2:13930857-13930876 | None:intergenic | 15.0% |
| !!! | TTTTTGAAATGAGAAATTTT+AGG | + | chr8_2:13930858-13930877 | None:intergenic | 15.0% |
| !! | TAAAATACTATAAAAAGTAG+AGG | + | chr8_2:13931609-13931628 | None:intergenic | 15.0% |
| !! | AAAATCACAGTAAAAAAAAC+CGG | - | chr8_2:13929290-13929309 | Msa1235740:CDS | 20.0% |
| !! | ATTTAATCTTGCAAATAAGA+TGG | - | chr8_2:13929966-13929985 | Msa1235740:intron | 20.0% |
| !! | AGAAAAATTGTTTAACATTC+TGG | - | chr8_2:13930347-13930366 | Msa1235740:intron | 20.0% |
| !! | GAAAAATTGTTTAACATTCT+GGG | - | chr8_2:13930348-13930367 | Msa1235740:intron | 20.0% |
| !!! | TATTGCATGAATTTATCTTT+TGG | + | chr8_2:13930784-13930803 | None:intergenic | 20.0% |
| !!! | TTTGAAATGAGAAATTTTAG+GGG | + | chr8_2:13930856-13930875 | None:intergenic | 20.0% |
| !! | TTCAAATTTCATCAATTTAG+TGG | + | chr8_2:13930891-13930910 | None:intergenic | 20.0% |
| !! | AGTTTACATTATGATTATAG+TGG | - | chr8_2:13931961-13931980 | Msa1235740:CDS | 20.0% |
| !!! | GGTTTTTTTTACTGTGATTT+TGG | + | chr8_2:13929291-13929310 | None:intergenic | 25.0% |
| ! | AAATCACAGTAAAAAAAACC+GGG | - | chr8_2:13929291-13929310 | Msa1235740:CDS | 25.0% |
| ! | GTATTGAATCGAAATTGAAA+TGG | - | chr8_2:13929924-13929943 | Msa1235740:intron | 25.0% |
| ! | TGAATAGTTCAGAAACAATT+TGG | + | chr8_2:13930263-13930282 | None:intergenic | 25.0% |
| !!! | ATAATCTTTTTTCCAGTTGA+AGG | + | chr8_2:13930495-13930514 | None:intergenic | 25.0% |
| !! | CATAAACTAACGATCTTTTT+AGG | + | chr8_2:13930630-13930649 | None:intergenic | 25.0% |
| ! | GAGTAATGTAATTGCATAAT+AGG | - | chr8_2:13930682-13930701 | Msa1235740:intron | 25.0% |
| ! | AATTCATGCAATATTGTACA+AGG | - | chr8_2:13930791-13930810 | Msa1235740:intron | 25.0% |
| !! | TTGAAATGAGAAATTTTAGG+GGG | + | chr8_2:13930855-13930874 | None:intergenic | 25.0% |
| ! | AAATTTGAAAATACAGCCTA+AGG | - | chr8_2:13930902-13930921 | Msa1235740:intron | 25.0% |
| !! | TATTTTCAATTCTTAGACAG+TGG | - | chr8_2:13930963-13930982 | Msa1235740:intron | 25.0% |
| !! | ATTTTCAATTCTTAGACAGT+GGG | - | chr8_2:13930964-13930983 | Msa1235740:intron | 25.0% |
| ! | AGAAAAATTGCTTAACATTC+TGG | - | chr8_2:13930987-13931006 | Msa1235740:intron | 25.0% |
| ! | GAAAAATTGCTTAACATTCT+GGG | - | chr8_2:13930988-13931007 | Msa1235740:intron | 25.0% |
| ! | AAAAATTGCTTAACATTCTG+GGG | - | chr8_2:13930989-13931008 | Msa1235740:intron | 25.0% |
| !!! | ATAATCTTTTTTCCAGTTGA+AGG | + | chr8_2:13930495-13930514 | None:intergenic | 25.0% |
| !!! | GAAGTGAGAAATTTTTTTGA+TGG | - | chr8_2:13931355-13931374 | Msa1235740:CDS | 25.0% |
| !!! | TTAAGTTGGTTTTAACAGTT+CGG | - | chr8_2:13931442-13931461 | Msa1235740:intron | 25.0% |
| !! | AGTAACTTGTAAGAAAATGA+AGG | + | chr8_2:13931700-13931719 | None:intergenic | 25.0% |
| AAGCTGAACGAGAAAAATTA+GGG | - | chr8_2:13929438-13929457 | Msa1235740:intron | 30.0% | |
| AGAAGAAAAACGCCAAATTT+AGG | - | chr8_2:13929501-13929520 | Msa1235740:intron | 30.0% | |
| GAAGAAAAACGCCAAATTTA+GGG | - | chr8_2:13929502-13929521 | Msa1235740:intron | 30.0% | |
| TTTCTCAGAAACCCTAAATT+TGG | + | chr8_2:13929516-13929535 | None:intergenic | 30.0% | |
| GGTTGGATTATATAACGTTA+GGG | - | chr8_2:13929558-13929577 | Msa1235740:intron | 30.0% | |
| !! | GAATCTTTTGAGGATGAAAA+AGG | - | chr8_2:13929700-13929719 | Msa1235740:intron | 30.0% |
| ATAAACATATTCACCGGAAA+CGG | + | chr8_2:13929785-13929804 | None:intergenic | 30.0% | |
| TTCTCAATATACCCATCAAT+AGG | + | chr8_2:13929824-13929843 | None:intergenic | 30.0% | |
| TGGGTATATTGAGAAGATTA+AGG | - | chr8_2:13929829-13929848 | Msa1235740:intron | 30.0% | |
| GTATATTGAGAAGATTAAGG+AGG | - | chr8_2:13929832-13929851 | Msa1235740:intron | 30.0% | |
| !! | GTTGAACTGAACTGATTTTA+TGG | - | chr8_2:13930186-13930205 | Msa1235740:intron | 30.0% |
| !! | ACTGAACTGATTTTATGGTT+CGG | - | chr8_2:13930191-13930210 | Msa1235740:intron | 30.0% |
| ! | TTTTCAAACATCACTCTGTT+CGG | + | chr8_2:13930240-13930259 | None:intergenic | 30.0% |
| !!! | TTTTGGTAGTGTAGATTATC+AGG | - | chr8_2:13930533-13930552 | Msa1235740:intron | 30.0% |
| TACTGTTATGAAACCTTACT+AGG | - | chr8_2:13930734-13930753 | Msa1235740:intron | 30.0% | |
| ! | AGCTTAAAGCATTTCAATGA+TGG | - | chr8_2:13930815-13930834 | Msa1235740:intron | 30.0% |
| ! | AAAGCATTTCAATGATGGTT+TGG | - | chr8_2:13930820-13930839 | Msa1235740:intron | 30.0% |
| TACTATGATTTCTCATCCTT+AGG | + | chr8_2:13930921-13930940 | None:intergenic | 30.0% | |
| AAAATTTCGTGATTGGAATC+TGG | + | chr8_2:13931332-13931351 | None:intergenic | 30.0% | |
| CTTCATCAAAATTTCGTGAT+TGG | + | chr8_2:13931339-13931358 | None:intergenic | 30.0% | |
| !!! | GTGAGAAATTTTTTTGATGG+AGG | - | chr8_2:13931358-13931377 | Msa1235740:CDS | 30.0% |
| CTGAACTAGTGAAATTAAGT+TGG | - | chr8_2:13931428-13931447 | Msa1235740:intron | 30.0% | |
| !! | GGTTTTTATGAGTTTAGTTC+AGG | - | chr8_2:13931483-13931502 | Msa1235740:CDS | 30.0% |
| TTGAACCAACATTAACAGTT+TGG | - | chr8_2:13931540-13931559 | Msa1235740:CDS | 30.0% | |
| ! | GAATGTAGTCAAATTGATTC+TGG | - | chr8_2:13931640-13931659 | Msa1235740:intron | 30.0% |
| AATTCAGTGAAGTCATGTTT+AGG | + | chr8_2:13931873-13931892 | None:intergenic | 30.0% | |
| !! | TGTAAACTTCTAAAGCTTCT+AGG | + | chr8_2:13931949-13931968 | None:intergenic | 30.0% |
| !! | TGTAAACTTCTAAAGCTTCT+AGG | + | chr8_2:13931949-13931968 | None:intergenic | 30.0% |
| !!! | ATGGTTTTAGCTTTGTGAGA+CGG | + | chr8_2:13929178-13929197 | None:intergenic | 35.0% |
| !!! | CTGTGATTTTGGAACGTTTT+AGG | + | chr8_2:13929280-13929299 | None:intergenic | 35.0% |
| GAAGCTGAACGAGAAAAATT+AGG | - | chr8_2:13929437-13929456 | Msa1235740:intron | 35.0% | |
| ! | TTCTGAGAAACCAACGATAA+TGG | - | chr8_2:13929526-13929545 | Msa1235740:intron | 35.0% |
| TCTGAGAAACCAACGATAAT+GGG | - | chr8_2:13929527-13929546 | Msa1235740:intron | 35.0% | |
| ACGTTATATAATCCAACCCA+GGG | + | chr8_2:13929556-13929575 | None:intergenic | 35.0% | |
| AACGTTATATAATCCAACCC+AGG | + | chr8_2:13929557-13929576 | None:intergenic | 35.0% | |
| GGGTTGGATTATATAACGTT+AGG | - | chr8_2:13929557-13929576 | Msa1235740:intron | 35.0% | |
| TCCTTCGTCAATTCATACTT+AGG | + | chr8_2:13929605-13929624 | None:intergenic | 35.0% | |
| TATGAATTGACGAAGGAAGA+TGG | - | chr8_2:13929608-13929627 | Msa1235740:intron | 35.0% | |
| ATGAATTGACGAAGGAAGAT+GGG | - | chr8_2:13929609-13929628 | Msa1235740:intron | 35.0% | |
| !! | AGTATAGTAGGGTTTTGATG+AGG | - | chr8_2:13929648-13929667 | Msa1235740:intron | 35.0% |
| !! | TCTTTTGAGGATGAAAAAGG+AGG | - | chr8_2:13929703-13929722 | Msa1235740:intron | 35.0% |
| GTTTCCGGTGAATATGTTTA+TGG | - | chr8_2:13929784-13929803 | Msa1235740:intron | 35.0% | |
| GTTGCCATAAACATATTCAC+CGG | + | chr8_2:13929791-13929810 | None:intergenic | 35.0% | |
| TCAATATACCCATCAATAGG+CGG | + | chr8_2:13929821-13929840 | None:intergenic | 35.0% | |
| ACACTATAATGCCACTACTA+TGG | + | chr8_2:13930051-13930070 | None:intergenic | 35.0% | |
| !! | GTCATAGTTTTGCGATAACT+AGG | - | chr8_2:13930089-13930108 | Msa1235740:intron | 35.0% |
| ACCGAACTGTTAAAACAGTT+CGG | - | chr8_2:13930128-13930147 | Msa1235740:intron | 35.0% | |
| !!! | ACCGAACTGTTTTAACAGTT+CGG | + | chr8_2:13930132-13930151 | None:intergenic | 35.0% |
| AAATCAGTTCAGTTCAACTC+CGG | + | chr8_2:13930184-13930203 | None:intergenic | 35.0% | |
| ! | GTGTTGGTGAATAATAGTGA+GGG | + | chr8_2:13930287-13930306 | None:intergenic | 35.0% |
| ! | TGTGTTGGTGAATAATAGTG+AGG | + | chr8_2:13930288-13930307 | None:intergenic | 35.0% |
| TTGAATCTCTGTTCTTGTGT+TGG | + | chr8_2:13930303-13930322 | None:intergenic | 35.0% | |
| GGTAAGATTAGCATCATACA+GGG | - | chr8_2:13930369-13930388 | Msa1235740:intron | 35.0% | |
| ! | GTTTTGCTCATACTAAACAG+TGG | - | chr8_2:13930402-13930421 | Msa1235740:intron | 35.0% |
| ATCATATTTCAGCACATGAC+AGG | - | chr8_2:13930573-13930592 | Msa1235740:intron | 35.0% | |
| ! | TTACTAGGTCATGATTTTCC+CGG | - | chr8_2:13930749-13930768 | Msa1235740:intron | 35.0% |
| ! | TATCTTTTGGATTTCCTTCC+CGG | + | chr8_2:13930771-13930790 | None:intergenic | 35.0% |
| AAGAACAAAGCCCTTTATGA+CGG | + | chr8_2:13931022-13931041 | None:intergenic | 35.0% | |
| ! | GTTTTGCTCATACTAAACAG+TGG | - | chr8_2:13930402-13930421 | Msa1235740:intron | 35.0% |
| !! | TTGTTGGTAGTGTAGATATC+AGG | - | chr8_2:13931177-13931196 | Msa1235740:intron | 35.0% |
| ATGGAGGTTATTGCAGATTA+AGG | - | chr8_2:13931374-13931393 | Msa1235740:CDS | 35.0% | |
| CTGAACCAAACTGTTAATGT+TGG | + | chr8_2:13931548-13931567 | None:intergenic | 35.0% | |
| ! | TTTGGTTCAGTTCTACAGTT+TGG | - | chr8_2:13931558-13931577 | Msa1235740:CDS | 35.0% |
| ! | TAGTCAAATTGATTCTGGTC+AGG | - | chr8_2:13931645-13931664 | Msa1235740:intron | 35.0% |
| CATTCAGATATTAGTAAGCC+AGG | - | chr8_2:13931779-13931798 | Msa1235740:CDS | 35.0% | |
| ! | TATTTCTGCAAACTAGTCAG+TGG | - | chr8_2:13931832-13931851 | Msa1235740:intron | 35.0% |
| ATTTCTGCAAACTAGTCAGT+GGG | - | chr8_2:13931833-13931852 | Msa1235740:intron | 35.0% | |
| ! | GGATACTGGTTGTGAGTAAT+GGG | + | chr8_2:13929092-13929111 | None:intergenic | 40.0% |
| ! | AGGATACTGGTTGTGAGTAA+TGG | + | chr8_2:13929093-13929112 | None:intergenic | 40.0% |
| AATGAAATGCGAGAGTGAAG+AGG | + | chr8_2:13929113-13929132 | None:intergenic | 40.0% | |
| AGCATGGTTGAAACGTTCTT+AGG | + | chr8_2:13929155-13929174 | None:intergenic | 40.0% | |
| !!! | GGAACGTTTTAGGATTTGAC+CGG | + | chr8_2:13929270-13929289 | None:intergenic | 40.0% |
| TTGGGTTTCAGAAAACGAAG+CGG | + | chr8_2:13929404-13929423 | None:intergenic | 40.0% | |
| CGTTATATAATCCAACCCAG+GGG | + | chr8_2:13929555-13929574 | None:intergenic | 40.0% | |
| GCCTAAGTATGAATTGACGA+AGG | - | chr8_2:13929601-13929620 | Msa1235740:intron | 40.0% | |
| GAAGGAAGATGGGATGAAAT+TGG | - | chr8_2:13929619-13929638 | Msa1235740:intron | 40.0% | |
| ! | AATTGGCCAAGGAGTATAGT+AGG | - | chr8_2:13929636-13929655 | Msa1235740:intron | 40.0% |
| ! | ATTGGCCAAGGAGTATAGTA+GGG | - | chr8_2:13929637-13929656 | Msa1235740:intron | 40.0% |
| CAAAACCCTACTATACTCCT+TGG | + | chr8_2:13929645-13929664 | None:intergenic | 40.0% | |
| !! | GGTTTTGATGAGGAAGCATA+GGG | - | chr8_2:13929658-13929677 | Msa1235740:intron | 40.0% |
| GATTAGGTAGATTCTGTCAC+AGG | - | chr8_2:13929883-13929902 | Msa1235740:intron | 40.0% | |
| ATTCTGTCACAGGTTAGTGT+TGG | - | chr8_2:13929893-13929912 | Msa1235740:intron | 40.0% | |
| TCAAATAGCGACCATAGTAG+TGG | - | chr8_2:13930037-13930056 | Msa1235740:intron | 40.0% | |
| CGGTGAAATTGTGAACGATT+CGG | + | chr8_2:13930164-13930183 | None:intergenic | 40.0% | |
| CGAATCGTTCACAATTTCAC+CGG | - | chr8_2:13930162-13930181 | Msa1235740:intron | 40.0% | |
| ATAACCTGCAACTTAGAGAG+TGG | - | chr8_2:13930323-13930342 | Msa1235740:intron | 40.0% | |
| TAACCTGCAACTTAGAGAGT+GGG | - | chr8_2:13930324-13930343 | Msa1235740:intron | 40.0% | |
| GGGTAAGATTAGCATCATAC+AGG | - | chr8_2:13930368-13930387 | Msa1235740:intron | 40.0% | |
| !!! | TAGCAGGCGCATTGTTTTTT+TGG | + | chr8_2:13930466-13930485 | None:intergenic | 40.0% |
| ATATTTCAGCACATGACAGG+TGG | - | chr8_2:13930576-13930595 | Msa1235740:intron | 40.0% | |
| GGGAAAATCATGACCTAGTA+AGG | + | chr8_2:13930750-13930769 | None:intergenic | 40.0% | |
| ! | TACTAGGTCATGATTTTCCC+GGG | - | chr8_2:13930750-13930769 | Msa1235740:intron | 40.0% |
| ! | ATCTTTTGGATTTCCTTCCC+GGG | + | chr8_2:13930770-13930789 | None:intergenic | 40.0% |
| GGGAAGATTACCGTCATAAA+GGG | - | chr8_2:13931009-13931028 | Msa1235740:intron | 40.0% | |
| !!! | TCTTTGTTTTCATACCGCAG+TGG | - | chr8_2:13931720-13931739 | Msa1235740:CDS | 40.0% |
| !! | TTGCGTTAGCTATTGACTTC+TGG | - | chr8_2:13931808-13931827 | Msa1235740:intron | 40.0% |
| !! | TGCGTTAGCTATTGACTTCT+GGG | - | chr8_2:13931809-13931828 | Msa1235740:intron | 40.0% |
| ! | GGCTTTTCCTTTTCCTTTGG+CGG | + | chr8_2:13929249-13929268 | None:intergenic | 45.0% |
| GCCAAAGGAAAAGGAAAAGC+CGG | - | chr8_2:13929248-13929267 | Msa1235740:CDS | 45.0% | |
| !! | ACCGGCTTTTCCTTTTCCTT+TGG | + | chr8_2:13929252-13929271 | None:intergenic | 45.0% |
| TTCAGAAAACGAAGCGGTGT+TGG | + | chr8_2:13929398-13929417 | None:intergenic | 45.0% | |
| AGATGGGATGAAATTGGCCA+AGG | - | chr8_2:13929625-13929644 | Msa1235740:intron | 45.0% | |
| !! | GGGTTTTGATGAGGAAGCAT+AGG | - | chr8_2:13929657-13929676 | Msa1235740:intron | 45.0% |
| AGGCTATTGAAGCTTTGCCT+GGG | - | chr8_2:13929723-13929742 | Msa1235740:intron | 45.0% | |
| AGATTAAGGAGGCTGCTGAT+AGG | - | chr8_2:13929843-13929862 | Msa1235740:intron | 45.0% | |
| TCAGTGGGAAGGAGAAGATT+AGG | - | chr8_2:13929867-13929886 | Msa1235740:intron | 45.0% | |
| CAGTTGAAGGAAGTGATAGC+AGG | + | chr8_2:13930482-13930501 | None:intergenic | 45.0% | |
| CTGCTATCACTTCCTTCAAC+TGG | - | chr8_2:13930480-13930499 | Msa1235740:intron | 45.0% | |
| GGGGAAGATTACCGTCATAA+AGG | - | chr8_2:13931008-13931027 | Msa1235740:intron | 45.0% | |
| !!! | TAGCAGGCGCGTTGTTTTTT+TGG | + | chr8_2:13931106-13931125 | None:intergenic | 45.0% |
| CAGTTGAAGGAAGTGATAGC+AGG | + | chr8_2:13930482-13930501 | None:intergenic | 45.0% | |
| CTGCTATCACTTCCTTCAAC+TGG | - | chr8_2:13930480-13930499 | Msa1235740:intron | 45.0% | |
| ! | CAGTTCGGTTCACACAGTTT+TGG | - | chr8_2:13931457-13931476 | Msa1235740:CDS | 45.0% |
| !!! | CGGTTCACACAGTTTTGGTT+TGG | - | chr8_2:13931462-13931481 | Msa1235740:CDS | 45.0% |
| GTAACTCCAGAACTCCACAA+AGG | + | chr8_2:13931676-13931695 | None:intergenic | 45.0% | |
| TGTTACGCAAAACTCCACTG+CGG | + | chr8_2:13931737-13931756 | None:intergenic | 45.0% | |
| !!! | AGATAATATATTTTTTTTTT+TGG | - | chr8_2:13930516-13930535 | Msa1235740:intron | 5.0% |
| !!! | ATATATTTTTTTTTTTTTGT+TGG | - | chr8_2:13931161-13931180 | Msa1235740:intron | 5.0% |
| !!! | TTTAAATATTTAATTTTGAT+TGG | - | chr8_2:13931249-13931268 | Msa1235740:CDS | 5.0% |
| !!! | TTAAATATTTAATTTTGATT+GGG | - | chr8_2:13931250-13931269 | Msa1235740:CDS | 5.0% |
| !! | ACTGGTTGTGAGTAATGGGC+CGG | + | chr8_2:13929088-13929107 | None:intergenic | 50.0% |
| TGCGAGAGTGAAGAGGATAC+TGG | + | chr8_2:13929106-13929125 | None:intergenic | 50.0% | |
| !! | TAGCTTTGTGAGACGGAGCA+TGG | + | chr8_2:13929171-13929190 | None:intergenic | 50.0% |
| ! | TTCCTTTTCCTTTGGCGGTG+CGG | + | chr8_2:13929244-13929263 | None:intergenic | 50.0% |
| ! | TTCTTGTTTCTCGCGGGATC+CGG | + | chr8_2:13929342-13929361 | None:intergenic | 50.0% |
| ! | TTCGCGTTCTTGTTTCTCGC+GGG | + | chr8_2:13929348-13929367 | None:intergenic | 50.0% |
| ! | GTTCGCGTTCTTGTTTCTCG+CGG | + | chr8_2:13929349-13929368 | None:intergenic | 50.0% |
| !! | CGTTGAGGCATTGATCGTAG+AGG | + | chr8_2:13929373-13929392 | None:intergenic | 50.0% |
| !! | CAACGATAATGGGAACCCCT+GGG | - | chr8_2:13929537-13929556 | Msa1235740:intron | 50.0% |
| GAGGCTATTGAAGCTTTGCC+TGG | - | chr8_2:13929722-13929741 | Msa1235740:intron | 50.0% | |
| GGCTATTGAAGCTTTGCCTG+GGG | - | chr8_2:13929724-13929743 | Msa1235740:intron | 50.0% | |
| GCTATTGAAGCTTTGCCTGG+GGG | - | chr8_2:13929725-13929744 | Msa1235740:intron | 50.0% | |
| GGGTTTGAAGGAAGCTGCTT+TGG | - | chr8_2:13929745-13929764 | Msa1235740:intron | 50.0% | |
| ACCGGAAACGGCGTAAAATC+CGG | + | chr8_2:13929773-13929792 | None:intergenic | 50.0% | |
| AGGCTGCTGATAGGATCAGT+GGG | - | chr8_2:13929852-13929871 | Msa1235740:intron | 50.0% | |
| TGCTGATAGGATCAGTGGGA+AGG | - | chr8_2:13929856-13929875 | Msa1235740:intron | 50.0% | |
| GCGATAACTAGGCCTGTTCA+TGG | - | chr8_2:13930100-13930119 | Msa1235740:intron | 50.0% | |
| GTTCGGTTCAGACCATGAAC+AGG | + | chr8_2:13930115-13930134 | None:intergenic | 50.0% | |
| TCTCCCACTCTCTAAGTTGC+AGG | + | chr8_2:13930330-13930349 | None:intergenic | 50.0% | |
| ! | AGGTCATGATTTTCCCGGGA+AGG | - | chr8_2:13930754-13930773 | Msa1235740:intron | 50.0% |
| !! | GACTAGCCTTTGTGGAGTTC+TGG | - | chr8_2:13931667-13931686 | Msa1235740:CDS | 50.0% |
| GTCGTTGCGTAGCAGTACAT+AGG | + | chr8_2:13931760-13931779 | None:intergenic | 50.0% | |
| TAGCTAACGCAAGAGAAGCC+TGG | + | chr8_2:13931800-13931819 | None:intergenic | 50.0% | |
| !! | TTGTGAGTAATGGGCCGGGT+CGG | + | chr8_2:13929083-13929102 | None:intergenic | 55.0% |
| !! | CTGGTTGTGAGTAATGGGCC+GGG | + | chr8_2:13929087-13929106 | None:intergenic | 55.0% |
| TGGTGCGGTGAAGATGACGA+TGG | + | chr8_2:13929197-13929216 | None:intergenic | 55.0% | |
| CCAGGGGTTCCCATTATCGT+TGG | + | chr8_2:13929539-13929558 | None:intergenic | 55.0% | |
| !! | CCAACGATAATGGGAACCCC+TGG | - | chr8_2:13929536-13929555 | Msa1235740:intron | 55.0% |
| !! | GATAATGGGAACCCCTGGGT+TGG | - | chr8_2:13929541-13929560 | Msa1235740:intron | 55.0% |
| GAAGCATAGGGCGAGACAAG+CGG | - | chr8_2:13929670-13929689 | Msa1235740:intron | 55.0% | |
| ! | CGGCGGAGACGAATCTTTTG+AGG | - | chr8_2:13929690-13929709 | Msa1235740:intron | 55.0% |
| AGCTTTGCCTGGGGGTTTGA+AGG | - | chr8_2:13929733-13929752 | Msa1235740:intron | 55.0% | |
| ! | GAAGGAAGCTGCTTTGGTGC+CGG | - | chr8_2:13929751-13929770 | Msa1235740:intron | 55.0% |
| ! | GCCGGATTTTACGCCGTTTC+CGG | - | chr8_2:13929769-13929788 | Msa1235740:intron | 55.0% |
| ACGCTTACGCCGCCTATTGA+TGG | - | chr8_2:13929809-13929828 | Msa1235740:intron | 55.0% | |
| CGCTTACGCCGCCTATTGAT+GGG | - | chr8_2:13929810-13929829 | Msa1235740:intron | 55.0% | |
| GAGGCTGCTGATAGGATCAG+TGG | - | chr8_2:13929851-13929870 | Msa1235740:intron | 55.0% | |
| !! | CTGGTCAGGACTAGCCTTTG+TGG | - | chr8_2:13931659-13931678 | Msa1235740:CDS | 55.0% |
| !! | CAGCGTTGGAGGAGTTGGTG+CGG | + | chr8_2:13929212-13929231 | None:intergenic | 60.0% |
| AGCCGCACCGCCAAAGGAAA+AGG | - | chr8_2:13929239-13929258 | Msa1235740:CDS | 60.0% | |
| TTTCTCGCGGGATCCGGTTG+GGG | + | chr8_2:13929336-13929355 | None:intergenic | 60.0% | |
| GTTTCTCGCGGGATCCGGTT+GGG | + | chr8_2:13929337-13929356 | None:intergenic | 60.0% | |
| TGTTTCTCGCGGGATCCGGT+TGG | + | chr8_2:13929338-13929357 | None:intergenic | 60.0% | |
| !! | GAAGCGGTGTTGGTGCGTTG+AGG | + | chr8_2:13929388-13929407 | None:intergenic | 60.0% |
| GCTTCGCGTGCGCGTTGTTT+GGG | + | chr8_2:13929422-13929441 | None:intergenic | 60.0% | |
| AGCTTCGCGTGCGCGTTGTT+TGG | + | chr8_2:13929423-13929442 | None:intergenic | 60.0% | |
| GCAGCTTCCTTCAAACCCCC+AGG | + | chr8_2:13929743-13929762 | None:intergenic | 60.0% | |
| ! | CGGAGCAGCGTTGGAGGAGT+TGG | + | chr8_2:13929217-13929236 | None:intergenic | 65.0% |
| TCCTTTGGCGGTGCGGCTGA+CGG | + | chr8_2:13929237-13929256 | None:intergenic | 65.0% | |
| TCCAGGTGTGGGTTCGGACC+CGG | + | chr8_2:13929312-13929331 | None:intergenic | 65.0% | |
| TGGGGCTCCAGGTGTGGGTT+CGG | + | chr8_2:13929318-13929337 | None:intergenic | 65.0% | |
| GCATAGGGCGAGACAAGCGG+CGG | - | chr8_2:13929673-13929692 | Msa1235740:intron | 65.0% | |
| !! | GTAATGGGCCGGGTCGGTCC+AGG | + | chr8_2:13929077-13929096 | None:intergenic | 70.0% |
| ! | GGCTGACGGAGCAGCGTTGG+AGG | + | chr8_2:13929223-13929242 | None:intergenic | 70.0% |
| TGCGGCTGACGGAGCAGCGT+TGG | + | chr8_2:13929226-13929245 | None:intergenic | 70.0% | |
| TCCGTCAGCCGCACCGCCAA+AGG | - | chr8_2:13929233-13929252 | Msa1235740:CDS | 70.0% | |
| ACCGGGTCCGAACCCACACC+TGG | - | chr8_2:13929308-13929327 | Msa1235740:CDS | 70.0% | |
| CCGGTTGGGGCTCCAGGTGT+GGG | + | chr8_2:13929323-13929342 | None:intergenic | 70.0% | |
| CCCACACCTGGAGCCCCAAC+CGG | - | chr8_2:13929320-13929339 | Msa1235740:CDS | 70.0% | |
| TCCGGTTGGGGCTCCAGGTG+TGG | + | chr8_2:13929324-13929343 | None:intergenic | 70.0% | |
| CGGGATCCGGTTGGGGCTCC+AGG | + | chr8_2:13929329-13929348 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 13929068 | 13932041 | 13929068 | ID=Msa1235740;Name=Msa1235740 |
| chr8_2 | mRNA | 13929068 | 13932041 | 13929068 | ID=Msa1235740-mRNA-1;Parent=Msa1235740;Name=Msa1235740-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0.2|1|0|0|5|100|322 |
| chr8_2 | exon | 13929068 | 13929369 | 13929068 | ID=Msa1235740-mRNA-1:exon:5358;Parent=Msa1235740-mRNA-1 |
| chr8_2 | exon | 13931221 | 13931435 | 13931221 | ID=Msa1235740-mRNA-1:exon:5357;Parent=Msa1235740-mRNA-1 |
| chr8_2 | exon | 13931451 | 13931640 | 13931451 | ID=Msa1235740-mRNA-1:exon:5356;Parent=Msa1235740-mRNA-1 |
| chr8_2 | exon | 13931650 | 13931809 | 13931650 | ID=Msa1235740-mRNA-1:exon:5355;Parent=Msa1235740-mRNA-1 |
| chr8_2 | exon | 13931840 | 13932041 | 13931840 | ID=Msa1235740-mRNA-1:exon:5354;Parent=Msa1235740-mRNA-1 |
| chr8_2 | CDS | 13931840 | 13932041 | 13931840 | ID=Msa1235740-mRNA-1:cds;Parent=Msa1235740-mRNA-1 |
| chr8_2 | CDS | 13931650 | 13931809 | 13931650 | ID=Msa1235740-mRNA-1:cds;Parent=Msa1235740-mRNA-1 |
| chr8_2 | CDS | 13931451 | 13931640 | 13931451 | ID=Msa1235740-mRNA-1:cds;Parent=Msa1235740-mRNA-1 |
| chr8_2 | CDS | 13931221 | 13931435 | 13931221 | ID=Msa1235740-mRNA-1:cds;Parent=Msa1235740-mRNA-1 |
| chr8_2 | CDS | 13929168 | 13929369 | 13929168 | ID=Msa1235740-mRNA-1:cds;Parent=Msa1235740-mRNA-1 |
| chr8_2 | three_prime_UTR | 13929068 | 13929167 | 13929068 | ID=Msa1235740-mRNA-1:three_prime_utr;Parent=Msa1235740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
