AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0426400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426400 MtrunA17_Chr3g0128421 97.044 778 22 1 1 777 1 778 0.0 1559
Msa0426400 MtrunA17_Chr3g0115061 22.430 321 188 10 459 766 182 454 2.43e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0426400 AT1G33400.1 44.949 792 416 7 1 776 1 788 0.0 684
Msa0426400 AT1G33400.2 44.800 750 394 7 43 776 55 800 0.0 662
Msa0426400 AT1G33400.3 44.320 625 328 7 168 776 2 622 0.0 538

Find 158 sgRNAs with CRISPR-Local

Find 521 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCCATTTGAAAGTAAAT+TGG 0.199937 3_2:+76785714 Msa0426400:CDS
AACACTGCGCCAGAACAATT+TGG 0.217761 3_2:-76787602 None:intergenic
TTTGCCCACCTGCCTTTATT+TGG 0.225137 3_2:-76785317 None:intergenic
AGAAACTCAAACAAGCAATT+AGG 0.229319 3_2:+76782165 Msa0426400:CDS
TATTGTCTTAAACATTCTTA+TGG 0.241604 3_2:+76785766 Msa0426400:CDS
TTGTTGTCGATGTAGTTAAA+TGG 0.243220 3_2:+76790292 Msa0426400:intron
ATAACGTAGTCTCGTGAATA+TGG 0.244246 3_2:+76790501 Msa0426400:three_prime_UTR
TACTACTATATTTGTGCTCT+TGG 0.267628 3_2:-76783479 None:intergenic
TATGAACAGAAGCGTCATTT+TGG 0.281117 3_2:-76787923 None:intergenic
TCATACAATTCACTTTAATC+TGG 0.303169 3_2:-76786069 None:intergenic
AAGCCTTAATATGCATAAAA+AGG 0.306459 3_2:+76788015 Msa0426400:CDS
CACTTTATAGCCCACTTTGC+TGG 0.311906 3_2:-76790069 None:intergenic
TGGTGTAGAGGAAGAAGATA+TGG 0.318513 3_2:+76782118 Msa0426400:exon
AGAAAATATGCATGAACATT+TGG 0.324630 3_2:-76786446 None:intergenic
ACTGCCTTCTGACATAGTTT+TGG 0.338485 3_2:+76785500 Msa0426400:CDS
AAATTTGCATGCATACAATA+AGG 0.339149 3_2:+76788317 Msa0426400:CDS
TTCATCCGTCCAACTTTACT+TGG 0.341657 3_2:+76789895 Msa0426400:CDS
AGTGGGAGAATTACAATTAT+CGG 0.343600 3_2:+76788955 Msa0426400:CDS
ACCATGCCTCTTCCTTTATC+AGG 0.346989 3_2:-76784662 None:intergenic
GAAACTCAAACAAGCAATTA+GGG 0.353034 3_2:+76782166 Msa0426400:CDS
AGCTTAAATGACAGGTCATT+TGG 0.360209 3_2:+76790112 Msa0426400:three_prime_UTR
ATTGCTTGTTTGAGTTTCTC+TGG 0.360886 3_2:-76782161 None:intergenic
CACCTGCCTTTATTTGGCAT+TGG 0.370556 3_2:-76785311 None:intergenic
TTGCTGGAAAAGCATTTGAT+TGG 0.382988 3_2:-76790053 None:intergenic
TGTTGTCGATGTAGTTAAAT+GGG 0.396158 3_2:+76790293 Msa0426400:intron
CTATATTTGTGCTCTTGGAT+TGG 0.397564 3_2:-76783474 None:intergenic
ACACTGCGCCAGAACAATTT+GGG 0.399716 3_2:-76787601 None:intergenic
GGCAAAGGAAGAAGAAAGAG+AGG 0.401323 3_2:+76782077 Msa0426400:five_prime_UTR
TTCCTTATCTTCAGTACCTT+AGG 0.401357 3_2:+76789999 Msa0426400:CDS
TGATATAGAGATTCCATTGA+TGG 0.401639 3_2:-76785800 None:intergenic
GGAGCTATGCTTGCCATCAA+TGG 0.404119 3_2:+76785787 Msa0426400:CDS
CTCGCACCAATGCCAAATAA+AGG 0.406668 3_2:+76785305 Msa0426400:CDS
GGCAAAGCTATTTATAAAGT+TGG 0.408738 3_2:+76786398 Msa0426400:CDS
TTGTTTCTTACCATAGCATA+TGG 0.409749 3_2:-76784731 None:intergenic
AGCATATTCAGCAAGATTGT+TGG 0.410224 3_2:-76785385 None:intergenic
TCAATTTCACCAACTTCAAA+AGG 0.415930 3_2:-76782598 None:intergenic
TGTGTGAACCCAAATTGTTC+TGG 0.426197 3_2:+76787593 Msa0426400:CDS
ATGCAGTTCTTACCGTGATC+TGG 0.426263 3_2:+76787968 Msa0426400:CDS
ATTTCTAAATTTCTCTCCTA+AGG 0.427458 3_2:-76790015 None:intergenic
TCATTGTAAAGCATCCATTC+AGG 0.429879 3_2:+76788982 Msa0426400:CDS
GCATATTCAGCAAGATTGTT+GGG 0.430584 3_2:-76785384 None:intergenic
CTCCTAAGGTACTGAAGATA+AGG 0.430916 3_2:-76790001 None:intergenic
GAATCCAATTTACTTTCAAA+TGG 0.433870 3_2:-76785718 None:intergenic
GTAGGTCGTTCAAGCAATAA+TGG 0.435815 3_2:-76785236 None:intergenic
AGATCTCAAAGCGTCTGAAA+TGG 0.439734 3_2:-76788277 None:intergenic
TTTAACTAGTAATGTGGAAC+AGG 0.443391 3_2:+76786171 Msa0426400:CDS
GAACATTTGGTTGGCAAGAA+TGG 0.445371 3_2:-76786433 None:intergenic
ATCAGTCTGGATGGAATTTG+AGG 0.445545 3_2:+76790345 Msa0426400:three_prime_UTR
AAATGTACACTGGAATGAAA+TGG 0.446196 3_2:-76786151 None:intergenic
ACAACACAAGCCGTAGCAGC+TGG 0.447881 3_2:+76786491 Msa0426400:CDS
AATGATTGTGAGCAAAAGAT+TGG 0.447994 3_2:+76785426 Msa0426400:CDS
GTAGTACGTACCTGGTGAAA+AGG 0.449674 3_2:-76782254 None:intergenic
CCGCCATCTGATGTTTCACC+AGG 0.449958 3_2:+76784686 Msa0426400:CDS
GCCTCTTCCTTTATCAGGTA+CGG 0.454469 3_2:-76784657 None:intergenic
GCATTTCATTGTCAATGTAC+TGG 0.457687 3_2:+76787524 Msa0426400:CDS
TTATGGACTTCATGCAGACT+TGG 0.466543 3_2:+76789973 Msa0426400:CDS
GGAAAGGCAAATATTGCATT+GGG 0.466884 3_2:+76783349 Msa0426400:CDS
TCTGGCATCAGGCATGGTAT+AGG 0.467429 3_2:+76783323 Msa0426400:intron
AAACACACCTTTGAATAGCT+TGG 0.472303 3_2:-76782856 None:intergenic
CATACAATTCACTTTAATCT+GGG 0.482197 3_2:-76786068 None:intergenic
AGGCTTTGCTGTAGTCAGAA+GGG 0.482651 3_2:+76790365 Msa0426400:three_prime_UTR
CATGGACTGTCAGATCAGTC+TGG 0.483310 3_2:+76786121 Msa0426400:CDS
ACACTTTGCAGCTTTATTTG+AGG 0.485080 3_2:-76784632 None:intergenic
AATATGCATGAACATTTGGT+TGG 0.489714 3_2:-76786442 None:intergenic
AGTGTCTCCGTACCTGATAA+AGG 0.493636 3_2:+76784650 Msa0426400:CDS
AAGAGTGTCGAATCATCAAC+AGG 0.494373 3_2:+76783409 Msa0426400:CDS
TAAGCAATAACTATATCATC+AGG 0.495058 3_2:-76789857 None:intergenic
CGTAGCAGCTGGGTGTCAGC+TGG 0.497449 3_2:+76786502 Msa0426400:CDS
GTCAACAGCATTGGTCGAAT+AGG 0.497911 3_2:+76789932 Msa0426400:CDS
AAATTGTTCTGGCGCAGTGT+TGG 0.499251 3_2:+76787604 Msa0426400:CDS
TATTGTTATAACACTTACTA+CGG 0.506825 3_2:+76790454 Msa0426400:three_prime_UTR
ATGTCAGAAGGCAGTACAGC+AGG 0.510667 3_2:-76785492 None:intergenic
GGCTTTAGATTATTATACTC+AGG 0.514932 3_2:+76782457 Msa0426400:CDS
TAACGTAGTCTCGTGAATAT+GGG 0.522517 3_2:+76790502 Msa0426400:three_prime_UTR
AAGAGAGGGAAAGAAAACAA+AGG 0.526427 3_2:+76782092 Msa0426400:five_prime_UTR
TGATGTTTCACCAGGTTCGT+TGG 0.526556 3_2:+76784694 Msa0426400:CDS
GAGGCTTTGCTGTAGTCAGA+AGG 0.526857 3_2:+76790364 Msa0426400:three_prime_UTR
AAACAAAGGAAGTGGTGTAG+AGG 0.527368 3_2:+76782106 Msa0426400:five_prime_UTR
TAGTACGTACCTGGTGAAAA+GGG 0.527455 3_2:-76782253 None:intergenic
CTCTAATGCTGATTATGTCA+AGG 0.527726 3_2:+76782436 Msa0426400:CDS
TGTCAGCTGGAATTGTCTTA+CGG 0.527745 3_2:+76786515 Msa0426400:CDS
AGGAAAGGCAAATATTGCAT+TGG 0.532015 3_2:+76783348 Msa0426400:CDS
GGGAAAGAAAACAAAGGAAG+TGG 0.532284 3_2:+76782098 Msa0426400:five_prime_UTR
GGAAAAGCATTTGATTGGAG+AGG 0.538529 3_2:-76790048 None:intergenic
GGAATTGTCTTACGGTCCAC+AGG 0.539785 3_2:+76786523 Msa0426400:CDS
TATTGTCACCCAAGTAAAGT+TGG 0.540829 3_2:-76789904 None:intergenic
TTAAAATCAATAGACGCTCA+TGG 0.541128 3_2:+76786103 Msa0426400:CDS
AAGAACGTAATTATCTTCTG+TGG 0.542033 3_2:-76785352 None:intergenic
CAATGGAATCTCTATATCAC+AGG 0.542199 3_2:+76785804 Msa0426400:CDS
CACGAGAGGTGGTTTGATGT+TGG 0.542732 3_2:+76782056 None:intergenic
TGCTGAAGAACCATATGCTA+TGG 0.542990 3_2:+76784721 Msa0426400:CDS
CTGCATTTCAAACAGACTCC+AGG 0.545321 3_2:-76787951 None:intergenic
GGAGAACAGCTTGAGTACTA+CGG 0.546828 3_2:+76783516 Msa0426400:CDS
TTCCCGCACAGAGCATAGCT+AGG 0.547122 3_2:-76782365 None:intergenic
ATACAAGGAACTCTATCAGC+AGG 0.548739 3_2:-76785258 None:intergenic
TCAATCACAGCTTAAATGAC+AGG 0.549658 3_2:+76790104 Msa0426400:three_prime_UTR
ATATTTACATGTCACACACT+TGG 0.549891 3_2:+76790395 Msa0426400:three_prime_UTR
AGATTGTCTCAAGATCAGTC+TGG 0.551035 3_2:+76790332 Msa0426400:three_prime_UTR
CACCAATGCCAAATAAAGGC+AGG 0.551316 3_2:+76785309 Msa0426400:CDS
TCATCCGTCCAACTTTACTT+GGG 0.552845 3_2:+76789896 Msa0426400:CDS
AGTGTGTGACATGTAAATAT+CGG 0.554543 3_2:-76790392 None:intergenic
ACACTGACTGCTGAGCGGCT+TGG 0.554958 3_2:-76790186 None:intergenic
CAGCTGACACCCAGCTGCTA+CGG 0.561855 3_2:-76786501 None:intergenic
GAAAGAAAAGATGTCCTGGT+TGG 0.562187 3_2:-76790478 None:intergenic
AGTAGTACAGCCGCGACAGA+AGG 0.563195 3_2:+76783495 Msa0426400:CDS
ACCCTAGCTATGCTCTGTGC+GGG 0.563516 3_2:+76782363 Msa0426400:CDS
TCCGTACCTGATAAAGGAAG+AGG 0.569385 3_2:+76784656 Msa0426400:CDS
GAGAACAGCTTGAGTACTAC+GGG 0.569449 3_2:+76783517 Msa0426400:CDS
TCCCGCACAGAGCATAGCTA+GGG 0.570994 3_2:-76782364 None:intergenic
AATAGTGCTGTCAACAGCAT+TGG 0.571018 3_2:+76789923 Msa0426400:CDS
TCAGCATGAACCAACGAACC+TGG 0.571881 3_2:-76784704 None:intergenic
GATATGTCCAAGCTATTCAA+AGG 0.573360 3_2:+76782849 Msa0426400:CDS
ATGAATGTCAAGGAGTGCAT+TGG 0.576376 3_2:+76785469 Msa0426400:CDS
TTACTTTATCAGCAACAGCT+AGG 0.576576 3_2:-76787667 None:intergenic
TTATGAAAGAAAAGATGTCC+TGG 0.578078 3_2:-76790482 None:intergenic
GGCTTTGCTGTAGTCAGAAG+GGG 0.580864 3_2:+76790366 Msa0426400:three_prime_UTR
TGTCTCAAGATCAGTCTGGA+TGG 0.581811 3_2:+76790336 Msa0426400:three_prime_UTR
AGGTGGTTTGATGTTGGCAA+AGG 0.584111 3_2:+76782062 None:intergenic
CAATGCCAAATAAAGGCAGG+TGG 0.596184 3_2:+76785312 Msa0426400:CDS
CCAGCCAAAACTATGTCAGA+AGG 0.604974 3_2:-76785504 None:intergenic
TGTACATTTAACTAGTAATG+TGG 0.607675 3_2:+76786165 Msa0426400:CDS
ATATGGAAATGACAGGCTGC+AGG 0.608699 3_2:+76788221 Msa0426400:intron
TGAAATATAGGCATTACGAA+AGG 0.609774 3_2:+76782573 Msa0426400:intron
ATTACTAGTTAAATGTACAC+TGG 0.610954 3_2:-76786161 None:intergenic
TGCATTTCAAACAGACTCCA+GGG 0.616596 3_2:-76787950 None:intergenic
GAACATAAACATGAATGTCA+AGG 0.620275 3_2:+76785459 Msa0426400:CDS
CATTGGTGCGAGCAGTACAA+TGG 0.620389 3_2:-76785294 None:intergenic
CAACACAAGCCGTAGCAGCT+GGG 0.623688 3_2:+76786492 Msa0426400:CDS
ACACTTACTACGGTCCAACC+AGG 0.624236 3_2:+76790464 Msa0426400:three_prime_UTR
TTGGTATGAAAGATCTACAA+TGG 0.624289 3_2:+76790131 Msa0426400:three_prime_UTR
ACCTGATAAAGGAAGAGGCA+TGG 0.627081 3_2:+76784661 Msa0426400:CDS
GAAGATATGGAGACTCTGAA+AGG 0.628550 3_2:+76782131 Msa0426400:exon
GCAAAGGAAGAAGAAAGAGA+GGG 0.630138 3_2:+76782078 Msa0426400:five_prime_UTR
GTGTCGAATCATCAACAGGA+GGG 0.630754 3_2:+76783413 Msa0426400:CDS
GGTATTGAACACGATATACA+AGG 0.636863 3_2:-76785273 None:intergenic
GTCACCCAAGTAAAGTTGGA+CGG 0.637144 3_2:-76789900 None:intergenic
TATATCTCCTAGGTCAGAGT+GGG 0.639961 3_2:+76786377 Msa0426400:intron
CACGTGAAGACTCCAGATCA+CGG 0.641430 3_2:-76787980 None:intergenic
GCTTCTGTTCATATTCACCC+TGG 0.643407 3_2:+76787933 Msa0426400:CDS
GCGTTGAAATATAAGCAGCT+TGG 0.647283 3_2:+76782401 Msa0426400:CDS
ATACAATAAGGTTATTGCAG+AGG 0.648948 3_2:+76788329 Msa0426400:CDS
GACCCTAGCTATGCTCTGTG+CGG 0.649554 3_2:+76782362 Msa0426400:CDS
TGTCACACACTTGGTTCTCG+AGG 0.654841 3_2:+76790404 Msa0426400:three_prime_UTR
AATGCCAAATAAAGGCAGGT+GGG 0.655407 3_2:+76785313 Msa0426400:CDS
AAGGAACTCTATCAGCAGGT+AGG 0.661361 3_2:-76785254 None:intergenic
CATCAGGCATGGTATAGGAG+AGG 0.668519 3_2:+76783328 Msa0426400:intron
AAGACAATATAACAATACAA+TGG 0.671651 3_2:-76785752 None:intergenic
GAACCTGGTGAAACATCAGA+TGG 0.672386 3_2:-76784689 None:intergenic
TCACACAATGAAAAGCATTG+AGG 0.676894 3_2:-76787577 None:intergenic
GGGAGAATTACAATTATCGG+CGG 0.684311 3_2:+76788958 Msa0426400:CDS
AAGCTGTTCTCCTTCTGTCG+CGG 0.691374 3_2:-76783505 None:intergenic
AGTGTCGAATCATCAACAGG+AGG 0.693713 3_2:+76783412 Msa0426400:CDS
GGACTGTCAGATCAGTCTGG+AGG 0.695431 3_2:+76786124 Msa0426400:CDS
GGCATGGTATAGGAGAGGAA+AGG 0.699336 3_2:+76783333 Msa0426400:intron
GCTTTGCTGTAGTCAGAAGG+GGG 0.705999 3_2:+76790367 Msa0426400:three_prime_UTR
CCTGGTGAAACATCAGATGG+CGG 0.706873 3_2:-76784686 None:intergenic
TTATATCTCCTAGGTCAGAG+TGG 0.711387 3_2:+76786376 Msa0426400:intron
AAGAAACACTGACTGCTGAG+CGG 0.726873 3_2:-76790191 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTTCAATATGATA+GGG + chr3_2:76785937-76785956 Msa0426400:intron 10.0%
!!! ATTATTATTACTTAGTTTTT+TGG + chr3_2:76786575-76786594 Msa0426400:intron 10.0%
!! AAATAAAATAAATCAAAACA+TGG + chr3_2:76787354-76787373 Msa0426400:intron 10.0%
!! AAAAAAAAAAAAAAAAAAGC+GGG + chr3_2:76789074-76789093 Msa0426400:intron 10.0%
!! TTATTAATAGTGAGAAATTA+GGG - chr3_2:76782301-76782320 None:intergenic 15.0%
!! AATAAACTAAGATTACAAAA+AGG - chr3_2:76782893-76782912 None:intergenic 15.0%
!! ATTTATCAAAACAAAGTAAT+TGG + chr3_2:76783048-76783067 Msa0426400:intron 15.0%
!! AAAGATTGAAATATTTATGT+CGG + chr3_2:76783859-76783878 Msa0426400:intron 15.0%
!!! TTTTTTTCCTTTGTTTTTTT+GGG + chr3_2:76785841-76785860 Msa0426400:intron 15.0%
!!! GAATATTTTTTCAATATGAT+AGG + chr3_2:76785936-76785955 Msa0426400:intron 15.0%
!! TATGATAATTTAGACATTAT+TGG + chr3_2:76786299-76786318 Msa0426400:intron 15.0%
!! AACTAAGTAATAATAATTAC+AGG - chr3_2:76786572-76786591 None:intergenic 15.0%
!!! TTTTATTTTTTTATGTTGAG+TGG - chr3_2:76787342-76787361 None:intergenic 15.0%
!!! AAAAAATGAAGTGTTTTAAA+GGG - chr3_2:76787856-76787875 None:intergenic 15.0%
!!! TTTTTTTTTTTTTAGCAGAA+TGG - chr3_2:76789055-76789074 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAAGCG+GGG + chr3_2:76789075-76789094 Msa0426400:intron 15.0%
!! GTTATTAATAGTGAGAAATT+AGG - chr3_2:76782302-76782321 None:intergenic 20.0%
!!! TTCTCTCTTTTCTTTATTTT+TGG + chr3_2:76782526-76782545 Msa0426400:intron 20.0%
!!! GTTTTTGCAATTTGAAATAT+AGG + chr3_2:76782561-76782580 Msa0426400:intron 20.0%
!! TTAAAAAGTGATTATGAATG+TGG - chr3_2:76782709-76782728 None:intergenic 20.0%
!! CTTAGTTTATTTGTACTATT+AGG + chr3_2:76782902-76782921 Msa0426400:intron 20.0%
!!! TTTTGATAACTTCATTATTC+TGG + chr3_2:76783305-76783324 Msa0426400:intron 20.0%
!! TAAATATTTCAATCTTTCCT+CGG - chr3_2:76783856-76783875 None:intergenic 20.0%
!!! ATTTTCTCATGCTTAATTTT+GGG - chr3_2:76783929-76783948 None:intergenic 20.0%
!!! TATTTTCTCATGCTTAATTT+TGG - chr3_2:76783930-76783949 None:intergenic 20.0%
!! ATTTAATTCTATAAGGAAGA+GGG - chr3_2:76784028-76784047 None:intergenic 20.0%
!! AATTTAATTCTATAAGGAAG+AGG - chr3_2:76784029-76784048 None:intergenic 20.0%
!! GTGCATAATTTAATTCTATA+AGG - chr3_2:76784035-76784054 None:intergenic 20.0%
!!! GCATATTAGTTTCTTAATAT+GGG - chr3_2:76784376-76784395 None:intergenic 20.0%
!!! AGCATATTAGTTTCTTAATA+TGG - chr3_2:76784377-76784396 None:intergenic 20.0%
!!! ATTCAATCCTATTTTACATA+TGG + chr3_2:76784486-76784505 Msa0426400:intron 20.0%
!! ATCTTTCATAAATAAATGCA+AGG - chr3_2:76784546-76784565 None:intergenic 20.0%
!!! ACAAAATGCTTTTAGATAAA+TGG + chr3_2:76784801-76784820 Msa0426400:intron 20.0%
!!! GAATTTGCTTTGAATTAATT+GGG - chr3_2:76785019-76785038 None:intergenic 20.0%
!!! TGAATTTGCTTTGAATTAAT+TGG - chr3_2:76785020-76785039 None:intergenic 20.0%
!! GGATTAATGCTTATAAAATA+TGG - chr3_2:76785123-76785142 None:intergenic 20.0%
!! AAGACAATATAACAATACAA+TGG - chr3_2:76785755-76785774 None:intergenic 20.0%
!! TATTGTCTTAAACATTCTTA+TGG + chr3_2:76785766-76785785 Msa0426400:CDS 20.0%
!!! CTTTTTTTCCTTTGTTTTTT+TGG + chr3_2:76785840-76785859 Msa0426400:intron 20.0%
!! AAAATGCATAAATATAGAAC+AGG - chr3_2:76786263-76786282 None:intergenic 20.0%
!! AATGTCTAAATTATCATAGT+AGG - chr3_2:76786297-76786316 None:intergenic 20.0%
!! ATTTCATAATTAGCACATTT+GGG + chr3_2:76786788-76786807 Msa0426400:intron 20.0%
!!! ATTCATCTTTTAGAAAACTT+TGG - chr3_2:76787502-76787521 None:intergenic 20.0%
!!! GAAAAAATGAAGTGTTTTAA+AGG - chr3_2:76787857-76787876 None:intergenic 20.0%
!!! TTAAAACACTTCATTTTTTC+AGG + chr3_2:76787857-76787876 Msa0426400:intron 20.0%
!!! TAGTTCTGAATAATTTTCAA+AGG - chr3_2:76788084-76788103 None:intergenic 20.0%
!! AAGAGAATAAAGTAAAATCA+TGG + chr3_2:76788502-76788521 Msa0426400:intron 20.0%
!! TAAAAAGAAAATTACCTGAA+TGG - chr3_2:76788999-76789018 None:intergenic 20.0%
!! GTGGAAATATAAATAATTCT+TGG + chr3_2:76789191-76789210 Msa0426400:intron 20.0%
!! GAAATATAAATAATTCTTGG+TGG + chr3_2:76789194-76789213 Msa0426400:intron 20.0%
!! TATTGTTATAACACTTACTA+CGG + chr3_2:76790454-76790473 Msa0426400:three_prime_UTR 20.0%
! ATTAGGGATTTAGTTGAAAT+GGG - chr3_2:76782285-76782304 None:intergenic 25.0%
! AATTAGGGATTTAGTTGAAA+TGG - chr3_2:76782286-76782305 None:intergenic 25.0%
! TTTCAAATTACGTTTGTAAG+TGG - chr3_2:76783130-76783149 None:intergenic 25.0%
! TAAATCAACATACTGTTTCA+AGG - chr3_2:76783785-76783804 None:intergenic 25.0%
!!! ATGTTGATTTAAGATACATG+TGG + chr3_2:76783794-76783813 Msa0426400:intron 25.0%
! TATTTACCTACTATTGCTAT+AGG - chr3_2:76783827-76783846 None:intergenic 25.0%
! TATAGCAATAGTAGGTAAAT+AGG + chr3_2:76783826-76783845 Msa0426400:intron 25.0%
! ATAGCAATAGTAGGTAAATA+GGG + chr3_2:76783827-76783846 Msa0426400:intron 25.0%
!! TTTTCTCATGCTTAATTTTG+GGG - chr3_2:76783928-76783947 None:intergenic 25.0%
! GAATTAAATTATGCACCTTA+TGG + chr3_2:76784039-76784058 Msa0426400:intron 25.0%
! TGTAAAATAGGATTGAATAG+CGG - chr3_2:76784484-76784503 None:intergenic 25.0%
! GATTACACCATATGTAAAAT+AGG - chr3_2:76784496-76784515 None:intergenic 25.0%
! AAAAGGAGAGGAAAAATAAA+TGG - chr3_2:76784569-76784588 None:intergenic 25.0%
!!! TCCTTTTTGAGATAATAAGA+TGG + chr3_2:76784582-76784601 Msa0426400:intron 25.0%
! ACCATCTTATTATCTCAAAA+AGG - chr3_2:76784586-76784605 None:intergenic 25.0%
!!! TTGATACTGTTTTTCTTTTC+AGG + chr3_2:76785182-76785201 Msa0426400:intron 25.0%
! CATCATTGTTATCTGATTAT+AGG + chr3_2:76785631-76785650 Msa0426400:intron 25.0%
!! TATGCCATTTGAAAGTAAAT+TGG + chr3_2:76785714-76785733 Msa0426400:CDS 25.0%
! GAATCCAATTTACTTTCAAA+TGG - chr3_2:76785721-76785740 None:intergenic 25.0%
! AAAAAATATTCTGCTACACA+AGG - chr3_2:76785927-76785946 None:intergenic 25.0%
! CATACAATTCACTTTAATCT+GGG - chr3_2:76786071-76786090 None:intergenic 25.0%
! TCATACAATTCACTTTAATC+TGG - chr3_2:76786072-76786091 None:intergenic 25.0%
! ATTACTAGTTAAATGTACAC+TGG - chr3_2:76786164-76786183 None:intergenic 25.0%
! TGTACATTTAACTAGTAATG+TGG + chr3_2:76786165-76786184 Msa0426400:CDS 25.0%
! AGAAAATATGCATGAACATT+TGG - chr3_2:76786449-76786468 None:intergenic 25.0%
! GATTTCATAATTAGCACATT+TGG + chr3_2:76786787-76786806 Msa0426400:intron 25.0%
! TTTCATAATTAGCACATTTG+GGG + chr3_2:76786789-76786808 Msa0426400:intron 25.0%
! GCTCAAAATAATATAGTAGT+AGG + chr3_2:76786974-76786993 Msa0426400:intron 25.0%
! ATTATCTTATACCAAGAGTT+AGG + chr3_2:76787033-76787052 Msa0426400:intron 25.0%
! TTGTTACAATTGCTTCAAAA+TGG - chr3_2:76787253-76787272 None:intergenic 25.0%
! GTATATTGAAACATTGAACA+AGG - chr3_2:76787432-76787451 None:intergenic 25.0%
! AAGCCTTAATATGCATAAAA+AGG + chr3_2:76788015-76788034 Msa0426400:CDS 25.0%
!! GTACCTTTTTATGCATATTA+AGG - chr3_2:76788021-76788040 None:intergenic 25.0%
!! TGAATAATTTTCAAAGGTGA+GGG - chr3_2:76788078-76788097 None:intergenic 25.0%
! ACTATTGAATAGTTTCCAAT+TGG + chr3_2:76788103-76788122 Msa0426400:intron 25.0%
! CTATTGAATAGTTTCCAATT+GGG + chr3_2:76788104-76788123 Msa0426400:intron 25.0%
! TATTGAATAGTTTCCAATTG+GGG + chr3_2:76788105-76788124 Msa0426400:intron 25.0%
! AGCTGATAGTAAATATTAGA+TGG + chr3_2:76788166-76788185 Msa0426400:intron 25.0%
! AAATTTGCATGCATACAATA+AGG + chr3_2:76788317-76788336 Msa0426400:CDS 25.0%
! AACATATGAAAACTGTACTT+AGG - chr3_2:76788385-76788404 None:intergenic 25.0%
!! TACAGTTTTCATATGTTTGT+TGG + chr3_2:76788388-76788407 Msa0426400:intron 25.0%
!! GTTTGTTGGACTATTTATAT+TGG + chr3_2:76788402-76788421 Msa0426400:intron 25.0%
! TGTCCTATTAATTGTGAATT+AGG + chr3_2:76788445-76788464 Msa0426400:intron 25.0%
! AGTCCTAATTCACAATTAAT+AGG - chr3_2:76788451-76788470 None:intergenic 25.0%
!! TAACTTTCATTTTCTTGTCA+TGG + chr3_2:76788887-76788906 Msa0426400:intron 25.0%
!!! AGTTTCCAAGTAACTTTTTT+CGG + chr3_2:76789166-76789185 Msa0426400:intron 25.0%
! ATTACTTTAACCATCATTCT+TGG - chr3_2:76789795-76789814 None:intergenic 25.0%
! TAAGCAATAACTATATCATC+AGG - chr3_2:76789860-76789879 None:intergenic 25.0%
! ATTTCTAAATTTCTCTCCTA+AGG - chr3_2:76790018-76790037 None:intergenic 25.0%
! GTCTTTGAATTGATATATTC+AGG + chr3_2:76790230-76790249 Msa0426400:intron 25.0%
AGAAACTCAAACAAGCAATT+AGG + chr3_2:76782165-76782184 Msa0426400:CDS 30.0%
GAAACTCAAACAAGCAATTA+GGG + chr3_2:76782166-76782185 Msa0426400:CDS 30.0%
!! GGCTTTAGATTATTATACTC+AGG + chr3_2:76782457-76782476 Msa0426400:CDS 30.0%
TGAAATATAGGCATTACGAA+AGG + chr3_2:76782573-76782592 Msa0426400:intron 30.0%
TCAATTTCACCAACTTCAAA+AGG - chr3_2:76782601-76782620 None:intergenic 30.0%
AGTGATTATGAATGTGGTTA+AGG - chr3_2:76782703-76782722 None:intergenic 30.0%
CACACATACACATGAATAAA+TGG - chr3_2:76782764-76782783 None:intergenic 30.0%
TACTACTATATTTGTGCTCT+TGG - chr3_2:76783482-76783501 None:intergenic 30.0%
!! GTGTTTCACTTTTGAATTCT+GGG + chr3_2:76783660-76783679 Msa0426400:intron 30.0%
GATTGTGGACATATATCTTA+TGG - chr3_2:76783723-76783742 None:intergenic 30.0%
GCATGATTAAGAAATGATTG+TGG - chr3_2:76783738-76783757 None:intergenic 30.0%
!!! TGAAGTACATTTCTGGTTTT+TGG - chr3_2:76783760-76783779 None:intergenic 30.0%
CTAGAAGATGAATGAAACTA+AGG + chr3_2:76783967-76783986 Msa0426400:intron 30.0%
TAAGCCACATGTTTAAACAA+AGG - chr3_2:76784131-76784150 None:intergenic 30.0%
!! GACTTTTTGAAGGCTTTTTA+GGG - chr3_2:76784182-76784201 None:intergenic 30.0%
!! TGACTTTTTGAAGGCTTTTT+AGG - chr3_2:76784183-76784202 None:intergenic 30.0%
GGAATGAGAAGAATAAAGTA+AGG - chr3_2:76784225-76784244 None:intergenic 30.0%
TACTTTATTCTTCTCATTCC+TGG + chr3_2:76784225-76784244 Msa0426400:intron 30.0%
TTTGATGTGAATTAGTACTG+AGG - chr3_2:76784339-76784358 None:intergenic 30.0%
ACCATAGTATAGAATGCATA+CGG - chr3_2:76784518-76784537 None:intergenic 30.0%
CTTATTATCTCAAAAAGGAG+AGG - chr3_2:76784581-76784600 None:intergenic 30.0%
! TTGTTTCTTACCATAGCATA+TGG - chr3_2:76784734-76784753 None:intergenic 30.0%
! TTTTACAATCTCGCAAGTTT+AGG + chr3_2:76784840-76784859 Msa0426400:intron 30.0%
TTTACAATCTCGCAAGTTTA+GGG + chr3_2:76784841-76784860 Msa0426400:intron 30.0%
!!! TTCAGCATTTTTTTATTGCC+TGG + chr3_2:76784917-76784936 Msa0426400:intron 30.0%
ACTATTAAGTACAGTTCCAA+GGG - chr3_2:76784976-76784995 None:intergenic 30.0%
AACTATTAAGTACAGTTCCA+AGG - chr3_2:76784977-76784996 None:intergenic 30.0%
! CTACAAGAGTTTGCTTATAT+TGG + chr3_2:76785059-76785078 Msa0426400:intron 30.0%
AAGAACGTAATTATCTTCTG+TGG - chr3_2:76785355-76785374 None:intergenic 30.0%
AATGATTGTGAGCAAAAGAT+TGG + chr3_2:76785426-76785445 Msa0426400:CDS 30.0%
GAACATAAACATGAATGTCA+AGG + chr3_2:76785459-76785478 Msa0426400:CDS 30.0%
! TTTTTGTCAAAGAACTCATC+TGG + chr3_2:76785543-76785562 Msa0426400:CDS 30.0%
GTTATCTGATTATAGGTATC+TGG + chr3_2:76785638-76785657 Msa0426400:intron 30.0%
TGATATAGAGATTCCATTGA+TGG - chr3_2:76785803-76785822 None:intergenic 30.0%
!!! TTCCTTTGTTTTTTTGGGTA+TGG + chr3_2:76785846-76785865 Msa0426400:intron 30.0%
ATCCATACCCAAAAAAACAA+AGG - chr3_2:76785851-76785870 None:intergenic 30.0%
TGACAAAACAAGATGAAACT+TGG - chr3_2:76786026-76786045 None:intergenic 30.0%
!!! TCATCTTGTTTTGTCAATAC+AGG + chr3_2:76786030-76786049 Msa0426400:intron 30.0%
TTAAAATCAATAGACGCTCA+TGG + chr3_2:76786103-76786122 Msa0426400:CDS 30.0%
AAATGTACACTGGAATGAAA+TGG - chr3_2:76786154-76786173 None:intergenic 30.0%
TTTAACTAGTAATGTGGAAC+AGG + chr3_2:76786171-76786190 Msa0426400:CDS 30.0%
CTGCACATATACTTATCAAT+TGG + chr3_2:76786205-76786224 Msa0426400:intron 30.0%
AATTTAGACATTATTGGCGA+TGG + chr3_2:76786305-76786324 Msa0426400:intron 30.0%
!!! GCGATGGCAATTTTTTTTTT+GGG + chr3_2:76786321-76786340 Msa0426400:intron 30.0%
! CTAGGAGATATAATGGAATA+TGG - chr3_2:76786369-76786388 None:intergenic 30.0%
CATATTCCATTATATCTCCT+AGG + chr3_2:76786367-76786386 Msa0426400:intron 30.0%
GGCAAAGCTATTTATAAAGT+TGG + chr3_2:76786398-76786417 Msa0426400:CDS 30.0%
AATATGCATGAACATTTGGT+TGG - chr3_2:76786445-76786464 None:intergenic 30.0%
CTTTATCAGATCAAGCTTTA+GGG - chr3_2:76786668-76786687 None:intergenic 30.0%
TCTTTATCAGATCAAGCTTT+AGG - chr3_2:76786669-76786688 None:intergenic 30.0%
! ATTTCAACAGAAATTTTGCC+AGG - chr3_2:76786764-76786783 None:intergenic 30.0%
GTCAAGAAACCAATTTCAAA+AGG + chr3_2:76786862-76786881 Msa0426400:intron 30.0%
!!! CACTCTTAACCTTTTGAAAT+TGG - chr3_2:76786874-76786893 None:intergenic 30.0%
AAAGGTTAAGAGTGAAAAGA+AGG + chr3_2:76786880-76786899 Msa0426400:intron 30.0%
! AGTTTTCCTATGGCTAATAA+TGG + chr3_2:76786913-76786932 Msa0426400:intron 30.0%
! TTTCCTCTAATTTTATGTGG+GGG - chr3_2:76787151-76787170 None:intergenic 30.0%
! CTTTCCTCTAATTTTATGTG+GGG - chr3_2:76787152-76787171 None:intergenic 30.0%
! CCTTTCCTCTAATTTTATGT+GGG - chr3_2:76787153-76787172 None:intergenic 30.0%
! TCCTTTCCTCTAATTTTATG+TGG - chr3_2:76787154-76787173 None:intergenic 30.0%
AATGGTTATATGCCAAGATT+GGG - chr3_2:76787235-76787254 None:intergenic 30.0%
AAATGGTTATATGCCAAGAT+TGG - chr3_2:76787236-76787255 None:intergenic 30.0%
! CAACTTTTTGTTGAGCTTTT+AGG + chr3_2:76787270-76787289 Msa0426400:intron 30.0%
!! TTGAGCTTTTAGGAAGTTAT+AGG + chr3_2:76787280-76787299 Msa0426400:intron 30.0%
AATTGTATTTCCACGACATA+TGG + chr3_2:76787303-76787322 Msa0426400:intron 30.0%
TTATGTTGAGTGGAAATGAT+CGG - chr3_2:76787332-76787351 None:intergenic 30.0%
! TGATAAAGTAAGCTACTTTG+AGG + chr3_2:76787679-76787698 Msa0426400:intron 30.0%
! GATAAAGTAAGCTACTTTGA+GGG + chr3_2:76787680-76787699 Msa0426400:intron 30.0%
! ACATATGTTGCTTAGCATTT+AGG + chr3_2:76787786-76787805 Msa0426400:intron 30.0%
GGAGAAAATAGTTCAAACAT+AGG - chr3_2:76787835-76787854 None:intergenic 30.0%
! CTGAATAATTTTCAAAGGTG+AGG - chr3_2:76788079-76788098 None:intergenic 30.0%
ATTGAATAGTTTCCAATTGG+GGG + chr3_2:76788106-76788125 Msa0426400:intron 30.0%
ACAGTTTACAGACTGAAATA+TGG + chr3_2:76788204-76788223 Msa0426400:intron 30.0%
ATACAATAAGGTTATTGCAG+AGG + chr3_2:76788329-76788348 Msa0426400:CDS 30.0%
TATGAAAACTGTACTTAGGA+TGG - chr3_2:76788381-76788400 None:intergenic 30.0%
TTCTCCTACAATATCAAACT+TGG + chr3_2:76788549-76788568 Msa0426400:intron 30.0%
GACAAGATTCATGAAATGTT+TGG + chr3_2:76788587-76788606 Msa0426400:intron 30.0%
! AAATCTTTTAACCAAGCTTC+AGG - chr3_2:76788647-76788666 None:intergenic 30.0%
AGTGGGAGAATTACAATTAT+CGG + chr3_2:76788955-76788974 Msa0426400:CDS 30.0%
ACAAACCTACTATCTTAGTT+TGG + chr3_2:76789019-76789038 Msa0426400:intron 30.0%
AAATCATGGTGCATTTACAA+TGG + chr3_2:76789254-76789273 Msa0426400:intron 30.0%
!!! TCATAGGAATGTTTTTAGCT+TGG + chr3_2:76789600-76789619 Msa0426400:intron 30.0%
!!! CATAGGAATGTTTTTAGCTT+GGG + chr3_2:76789601-76789620 Msa0426400:intron 30.0%
! ACAAACAAAAGCTTGCTTAT+GGG - chr3_2:76789706-76789725 None:intergenic 30.0%
! AACAAACAAAAGCTTGCTTA+TGG - chr3_2:76789707-76789726 None:intergenic 30.0%
! GATTGATAACAAGACCATAT+GGG - chr3_2:76789760-76789779 None:intergenic 30.0%
! AGATTGATAACAAGACCATA+TGG - chr3_2:76789761-76789780 None:intergenic 30.0%
!! GCTATTTTCTCACGTTATTA+TGG + chr3_2:76789956-76789975 Msa0426400:CDS 30.0%
TTGGTATGAAAGATCTACAA+TGG + chr3_2:76790131-76790150 Msa0426400:three_prime_UTR 30.0%
TTGTTGTCGATGTAGTTAAA+TGG + chr3_2:76790292-76790311 Msa0426400:intron 30.0%
TGTTGTCGATGTAGTTAAAT+GGG + chr3_2:76790293-76790312 Msa0426400:intron 30.0%
AGTGTGTGACATGTAAATAT+CGG - chr3_2:76790395-76790414 None:intergenic 30.0%
ATATTTACATGTCACACACT+TGG + chr3_2:76790395-76790414 Msa0426400:three_prime_UTR 30.0%
TTATGAAAGAAAAGATGTCC+TGG - chr3_2:76790485-76790504 None:intergenic 30.0%
AAGAGAGGGAAAGAAAACAA+AGG + chr3_2:76782092-76782111 Msa0426400:five_prime_UTR 35.0%
! ATTGCTTGTTTGAGTTTCTC+TGG - chr3_2:76782164-76782183 None:intergenic 35.0%
GATTTAGTTGAAATGGGAGA+AGG - chr3_2:76782279-76782298 None:intergenic 35.0%
! CTCTAATGCTGATTATGTCA+AGG + chr3_2:76782436-76782455 Msa0426400:CDS 35.0%
! AAGATTCATTTTCTGCAGCA+GGG - chr3_2:76782791-76782810 None:intergenic 35.0%
! AAAGATTCATTTTCTGCAGC+AGG - chr3_2:76782792-76782811 None:intergenic 35.0%
GATATGTCCAAGCTATTCAA+AGG + chr3_2:76782849-76782868 Msa0426400:CDS 35.0%
AAACACACCTTTGAATAGCT+TGG - chr3_2:76782859-76782878 None:intergenic 35.0%
TCGACAGAAACTTGATCATT+CGG - chr3_2:76783186-76783205 None:intergenic 35.0%
GCATTGAAGTTTGATGTAGT+TGG + chr3_2:76783232-76783251 Msa0426400:intron 35.0%
AACTTCATTATTCTGGCATC+AGG + chr3_2:76783312-76783331 Msa0426400:intron 35.0%
AGGAAAGGCAAATATTGCAT+TGG + chr3_2:76783348-76783367 Msa0426400:CDS 35.0%
GGAAAGGCAAATATTGCATT+GGG + chr3_2:76783349-76783368 Msa0426400:CDS 35.0%
CTATATTTGTGCTCTTGGAT+TGG - chr3_2:76783477-76783496 None:intergenic 35.0%
!! AATTTGCTAGCTGCTTAACA+AGG - chr3_2:76783554-76783573 None:intergenic 35.0%
TTGTTAAGCAGCTAGCAAAT+TGG + chr3_2:76783553-76783572 Msa0426400:intron 35.0%
!! AAATTGGTTAAGGCTTGTTG+AGG + chr3_2:76783569-76783588 Msa0426400:intron 35.0%
!! CGTGTTTCACTTTTGAATTC+TGG + chr3_2:76783659-76783678 Msa0426400:intron 35.0%
TTGAATTCTGGGTGATTCTT+TGG + chr3_2:76783671-76783690 Msa0426400:intron 35.0%
TGAATTCTGGGTGATTCTTT+GGG + chr3_2:76783672-76783691 Msa0426400:intron 35.0%
CAAGGATTGAAGTACATTTC+TGG - chr3_2:76783767-76783786 None:intergenic 35.0%
!! AAAGGTATCCAAGACTGAAT+AGG - chr3_2:76783901-76783920 None:intergenic 35.0%
!! GCTTAATTTTGGGGAACTAA+AGG - chr3_2:76783919-76783938 None:intergenic 35.0%
AATTATGCACCTTATGGACT+AGG + chr3_2:76784045-76784064 Msa0426400:intron 35.0%
! ATTATGCACCTTATGGACTA+GGG + chr3_2:76784046-76784065 Msa0426400:intron 35.0%
ACATGTTTAAACAAAGGCAG+GGG - chr3_2:76784125-76784144 None:intergenic 35.0%
CACATGTTTAAACAAAGGCA+GGG - chr3_2:76784126-76784145 None:intergenic 35.0%
!! TTTTGAAGGCTTTTTAGGGA+TGG - chr3_2:76784178-76784197 None:intergenic 35.0%
! GTATGCAAGTGACTTTTTGA+AGG - chr3_2:76784192-76784211 None:intergenic 35.0%
TGCTAGAAAACTTCAATCAG+AGG + chr3_2:76784393-76784412 Msa0426400:intron 35.0%
TCCGTATGCATTCTATACTA+TGG + chr3_2:76784514-76784533 Msa0426400:intron 35.0%
!! ACACTTTGCAGCTTTATTTG+AGG - chr3_2:76784635-76784654 None:intergenic 35.0%
! GCTTCAATTGAAAGTACAAG+AGG + chr3_2:76784872-76784891 Msa0426400:intron 35.0%
TGGCGATTATGTAAGCAAAT+AGG + chr3_2:76785079-76785098 Msa0426400:intron 35.0%
ACAGTCTTCTTGAGATGAAT+GGG + chr3_2:76785143-76785162 Msa0426400:intron 35.0%
! GGTATTGAACACGATATACA+AGG - chr3_2:76785276-76785295 None:intergenic 35.0%
GCATATTCAGCAAGATTGTT+GGG - chr3_2:76785387-76785406 None:intergenic 35.0%
AGCATATTCAGCAAGATTGT+TGG - chr3_2:76785388-76785407 None:intergenic 35.0%
! TGGAGATATCACAAGTTTTG+TGG + chr3_2:76785563-76785582 Msa0426400:CDS 35.0%
!! CACAAGTTTTGTGGAAAAGT+TGG + chr3_2:76785572-76785591 Msa0426400:CDS 35.0%
! AGCTTTTATTCTTACTGTGC+AGG + chr3_2:76785669-76785688 Msa0426400:intron 35.0%
CAATGGAATCTCTATATCAC+AGG + chr3_2:76785804-76785823 Msa0426400:CDS 35.0%
! CTCTATATCACAGGTTGTTT+TGG + chr3_2:76785813-76785832 Msa0426400:intron 35.0%
!!! TCTTGTTTTGTCAATACAGG+TGG + chr3_2:76786033-76786052 Msa0426400:intron 35.0%
!!! GGCGATGGCAATTTTTTTTT+TGG + chr3_2:76786320-76786339 Msa0426400:intron 35.0%
!! GTCCACAGGTAACTTATTTT+TGG + chr3_2:76786537-76786556 Msa0426400:intron 35.0%
CTCCAAAAATAAGTTACCTG+TGG - chr3_2:76786542-76786561 None:intergenic 35.0%
GGTTCATATTCTTGACAACA+TGG + chr3_2:76786818-76786837 Msa0426400:intron 35.0%
! ATCATGAGTGAGTTTTCCTA+TGG + chr3_2:76786903-76786922 Msa0426400:intron 35.0%
TCAATGCCATTATTAGCCAT+AGG - chr3_2:76786922-76786941 None:intergenic 35.0%
TATGGCTAATAATGGCATTG+AGG + chr3_2:76786921-76786940 Msa0426400:intron 35.0%
! ATGGCTAATAATGGCATTGA+GGG + chr3_2:76786922-76786941 Msa0426400:intron 35.0%
!! AATCTTCTATTAGTGGGCTT+GGG - chr3_2:76787088-76787107 None:intergenic 35.0%
! GAAGACTACATTTTCTCTAC+GGG - chr3_2:76787129-76787148 None:intergenic 35.0%
! GGAAGACTACATTTTCTCTA+CGG - chr3_2:76787130-76787149 None:intergenic 35.0%
CCCACATAAAATTAGAGGAA+AGG + chr3_2:76787150-76787169 Msa0426400:intron 35.0%
ATGGTTATATGCCAAGATTG+GGG - chr3_2:76787234-76787253 None:intergenic 35.0%
! CAGATAAAGTTCTGTTTTGC+AGG + chr3_2:76787451-76787470 Msa0426400:intron 35.0%
! TAAAGTTCTGTTTTGCAGGT+TGG + chr3_2:76787455-76787474 Msa0426400:intron 35.0%
! AAAGTTCTGTTTTGCAGGTT+GGG + chr3_2:76787456-76787475 Msa0426400:intron 35.0%
GCATTTCATTGTCAATGTAC+TGG + chr3_2:76787524-76787543 Msa0426400:CDS 35.0%
!! TCACACAATGAAAAGCATTG+AGG - chr3_2:76787580-76787599 None:intergenic 35.0%
TTACTTTATCAGCAACAGCT+AGG - chr3_2:76787670-76787689 None:intergenic 35.0%
ATATGTAGAGTTGAGTGACT+TGG + chr3_2:76787748-76787767 Msa0426400:intron 35.0%
TTGCTTAGCATTTAGGAGTT+GGG + chr3_2:76787793-76787812 Msa0426400:intron 35.0%
!!! TATGAACAGAAGCGTCATTT+TGG - chr3_2:76787926-76787945 None:intergenic 35.0%
AAGGTACACACTGTTCAATT+TGG + chr3_2:76788034-76788053 Msa0426400:intron 35.0%
TGAGGGAAAAGCTGTTATTA+GGG - chr3_2:76788061-76788080 None:intergenic 35.0%
TATTTACTATCAGCTCATGC+AGG - chr3_2:76788161-76788180 None:intergenic 35.0%
GACTGAAATATGGAAATGAC+AGG + chr3_2:76788214-76788233 Msa0426400:intron 35.0%
CATGCCAAGTTTGATATTGT+AGG - chr3_2:76788556-76788575 None:intergenic 35.0%
CTACTTACACTATCAAGTCT+TGG - chr3_2:76788768-76788787 None:intergenic 35.0%
TCCCACTAAACAAAAAGCTT+GGG - chr3_2:76788942-76788961 None:intergenic 35.0%
! TCATTGTAAAGCATCCATTC+AGG + chr3_2:76788982-76789001 Msa0426400:CDS 35.0%
GGAAGTAGAAGTTTGGTTAT+TGG + chr3_2:76789096-76789115 Msa0426400:intron 35.0%
GTATCTCTTTCTGAATAGCT+AGG + chr3_2:76789136-76789155 Msa0426400:intron 35.0%
! TTTTCATTTCCCTCTCCATA+TGG - chr3_2:76789400-76789419 None:intergenic 35.0%
TGGAGAGGGAAATGAAAAAA+TGG + chr3_2:76789402-76789421 Msa0426400:intron 35.0%
CTAATGAACACATAAACCTG+TGG - chr3_2:76789474-76789493 None:intergenic 35.0%
CACAGGTTTATGTGTTCATT+AGG + chr3_2:76789472-76789491 Msa0426400:intron 35.0%
AGGTTTATGTGTTCATTAGG+AGG + chr3_2:76789475-76789494 Msa0426400:intron 35.0%
AAAGACCTCTCATTTCTCAA+TGG - chr3_2:76789545-76789564 None:intergenic 35.0%
TTTAATGCACATAGCCATAC+AGG + chr3_2:76789563-76789582 Msa0426400:intron 35.0%
! AATTAAGTCTTGTAGAGCCA+TGG + chr3_2:76789675-76789694 Msa0426400:intron 35.0%
ATCAGACTTTCCAAGAATGA+TGG + chr3_2:76789782-76789801 Msa0426400:intron 35.0%
!!! CTTTTTTCCGTTGCAGATTT+TGG + chr3_2:76789820-76789839 Msa0426400:intron 35.0%
ATCTTCTCCAAAATCTGCAA+CGG - chr3_2:76789830-76789849 None:intergenic 35.0%
TATTGTCACCCAAGTAAAGT+TGG - chr3_2:76789907-76789926 None:intergenic 35.0%
TTCCTTATCTTCAGTACCTT+AGG + chr3_2:76789999-76790018 Msa0426400:CDS 35.0%
!! TTGCTGGAAAAGCATTTGAT+TGG - chr3_2:76790056-76790075 None:intergenic 35.0%
! AAATGCTTTTCCAGCAAAGT+GGG + chr3_2:76790059-76790078 Msa0426400:three_prime_UTR 35.0%
TCAATCACAGCTTAAATGAC+AGG + chr3_2:76790104-76790123 Msa0426400:three_prime_UTR 35.0%
AGCTTAAATGACAGGTCATT+TGG + chr3_2:76790112-76790131 Msa0426400:three_prime_UTR 35.0%
! CGAGTAATTTTTCTTGAGGT+TGG - chr3_2:76790158-76790177 None:intergenic 35.0%
! GCATCGAGTAATTTTTCTTG+AGG - chr3_2:76790162-76790181 None:intergenic 35.0%
ATAACGTAGTCTCGTGAATA+TGG + chr3_2:76790501-76790520 Msa0426400:three_prime_UTR 35.0%
TAACGTAGTCTCGTGAATAT+GGG + chr3_2:76790502-76790521 Msa0426400:three_prime_UTR 35.0%
GCAAAGGAAGAAGAAAGAGA+GGG + chr3_2:76782078-76782097 Msa0426400:five_prime_UTR 40.0%
GGGAAAGAAAACAAAGGAAG+TGG + chr3_2:76782098-76782117 Msa0426400:five_prime_UTR 40.0%
AAACAAAGGAAGTGGTGTAG+AGG + chr3_2:76782106-76782125 Msa0426400:five_prime_UTR 40.0%
TGGTGTAGAGGAAGAAGATA+TGG + chr3_2:76782118-76782137 Msa0426400:exon 40.0%
GAAGATATGGAGACTCTGAA+AGG + chr3_2:76782131-76782150 Msa0426400:exon 40.0%
TAGTACGTACCTGGTGAAAA+GGG - chr3_2:76782256-76782275 None:intergenic 40.0%
GCGTTGAAATATAAGCAGCT+TGG + chr3_2:76782401-76782420 Msa0426400:CDS 40.0%
! TTCTGTCGAGAGACAGATTT+TGG + chr3_2:76783197-76783216 Msa0426400:intron 40.0%
! TCTGTCGAGAGACAGATTTT+GGG + chr3_2:76783198-76783217 Msa0426400:intron 40.0%
!! AAGAGTGTCGAATCATCAAC+AGG + chr3_2:76783409-76783428 Msa0426400:CDS 40.0%
AGCAGCTAGCAAATTGGTTA+AGG + chr3_2:76783559-76783578 Msa0426400:intron 40.0%
GATGAGCCTATAGCAATAGT+AGG + chr3_2:76783818-76783837 Msa0426400:intron 40.0%
!!! GGTGTTTTGGCTGAATTTCT+TGG - chr3_2:76784007-76784026 None:intergenic 40.0%
!!! CTATAAGGAAGAGGGTGTTT+TGG - chr3_2:76784020-76784039 None:intergenic 40.0%
CATGTTTAAACAAAGGCAGG+GGG - chr3_2:76784124-76784143 None:intergenic 40.0%
CCACATGTTTAAACAAAGGC+AGG - chr3_2:76784127-76784146 None:intergenic 40.0%
! CCTGCCTTTGTTTAAACATG+TGG + chr3_2:76784124-76784143 Msa0426400:intron 40.0%
AGTCACTTGCATACATCAAG+AGG + chr3_2:76784198-76784217 Msa0426400:intron 40.0%
GTTTGCACACATTTCATTCC+AGG - chr3_2:76784246-76784265 None:intergenic 40.0%
GATTGTATGCTAGACGAGTT+AGG + chr3_2:76784272-76784291 Msa0426400:intron 40.0%
!! AGTTCTGAGAGAATGGAGAA+GGG - chr3_2:76784313-76784332 None:intergenic 40.0%
!! AAGTTCTGAGAGAATGGAGA+AGG - chr3_2:76784314-76784333 None:intergenic 40.0%
!! GAGGTAAAGTTCTGAGAGAA+TGG - chr3_2:76784320-76784339 None:intergenic 40.0%
CAAACAAAATGTGACCAACG+AGG - chr3_2:76784455-76784474 None:intergenic 40.0%
ATAGGATTGAATAGCGGTCA+GGG - chr3_2:76784478-76784497 None:intergenic 40.0%
AATAGGATTGAATAGCGGTC+AGG - chr3_2:76784479-76784498 None:intergenic 40.0%
TGCTGAAGAACCATATGCTA+TGG + chr3_2:76784721-76784740 Msa0426400:CDS 40.0%
! AGTTCTCTGGAAAGAAAACC+AGG - chr3_2:76784938-76784957 None:intergenic 40.0%
! TGGTTTTCTTTCCAGAGAAC+TGG + chr3_2:76784937-76784956 Msa0426400:intron 40.0%
ATTAAGTACAGTTCCAAGGG+AGG - chr3_2:76784973-76784992 None:intergenic 40.0%
CATTCATCTCAAGAAGACTG+TGG - chr3_2:76785144-76785163 None:intergenic 40.0%
CACAGTCTTCTTGAGATGAA+TGG + chr3_2:76785142-76785161 Msa0426400:intron 40.0%
GTAGGTCGTTCAAGCAATAA+TGG - chr3_2:76785239-76785258 None:intergenic 40.0%
ATACAAGGAACTCTATCAGC+AGG - chr3_2:76785261-76785280 None:intergenic 40.0%
AATGCCAAATAAAGGCAGGT+GGG + chr3_2:76785313-76785332 Msa0426400:CDS 40.0%
! ATGAATGTCAAGGAGTGCAT+TGG + chr3_2:76785469-76785488 Msa0426400:CDS 40.0%
! ACTGCCTTCTGACATAGTTT+TGG + chr3_2:76785500-76785519 Msa0426400:CDS 40.0%
CTGCTACACAAGGTTTATGA+TGG - chr3_2:76785917-76785936 None:intergenic 40.0%
AATATGGCTCAGAATCACGA+AGG - chr3_2:76786353-76786372 None:intergenic 40.0%
CTCTGACCTAGGAGATATAA+TGG - chr3_2:76786376-76786395 None:intergenic 40.0%
TTATATCTCCTAGGTCAGAG+TGG + chr3_2:76786376-76786395 Msa0426400:intron 40.0%
TATATCTCCTAGGTCAGAGT+GGG + chr3_2:76786377-76786396 Msa0426400:intron 40.0%
GAACATTTGGTTGGCAAGAA+TGG - chr3_2:76786436-76786455 None:intergenic 40.0%
TGTCAGCTGGAATTGTCTTA+CGG + chr3_2:76786515-76786534 Msa0426400:CDS 40.0%
! CTTTAGGGATGCTTGATTAC+TGG - chr3_2:76786653-76786672 None:intergenic 40.0%
GCCTATATAAAAGAGTGACC+TGG + chr3_2:76786743-76786762 Msa0426400:intron 40.0%
! GCCAGGTCACTCTTTTATAT+AGG - chr3_2:76786747-76786766 None:intergenic 40.0%
TCTTGACAACATGGCTGAAA+AGG + chr3_2:76786827-76786846 Msa0426400:intron 40.0%
! TGGCTAATAATGGCATTGAG+GGG + chr3_2:76786923-76786942 Msa0426400:intron 40.0%
!!! AGGGGTATTTTTGCTACGAT+AGG + chr3_2:76786941-76786960 Msa0426400:intron 40.0%
CTTATACCAAGAGTTAGGTC+AGG + chr3_2:76787038-76787057 Msa0426400:intron 40.0%
ACAATACCTGACCTAACTCT+TGG - chr3_2:76787047-76787066 None:intergenic 40.0%
!! CAATCTTCTATTAGTGGGCT+TGG - chr3_2:76787089-76787108 None:intergenic 40.0%
CGCAGCAATCTTCTATTAGT+GGG - chr3_2:76787094-76787113 None:intergenic 40.0%
TCGCAGCAATCTTCTATTAG+TGG - chr3_2:76787095-76787114 None:intergenic 40.0%
CTTCCCCCACATAAAATTAG+AGG + chr3_2:76787145-76787164 Msa0426400:intron 40.0%
TGTGTGAACCCAAATTGTTC+TGG + chr3_2:76787593-76787612 Msa0426400:CDS 40.0%
GTTGCTTAGCATTTAGGAGT+TGG + chr3_2:76787792-76787811 Msa0426400:intron 40.0%
TGCATTTCAAACAGACTCCA+GGG - chr3_2:76787953-76787972 None:intergenic 40.0%
GTGAGGGAAAAGCTGTTATT+AGG - chr3_2:76788062-76788081 None:intergenic 40.0%
! AGATCTCAAAGCGTCTGAAA+TGG - chr3_2:76788280-76788299 None:intergenic 40.0%
! AGGATGGAGAACTTTTGTGA+AGG - chr3_2:76788365-76788384 None:intergenic 40.0%
!! AAAAGCATTCTCCTGAAGCT+TGG + chr3_2:76788633-76788652 Msa0426400:intron 40.0%
ATCCAAACACAGTCAGAGAT+AGG + chr3_2:76788687-76788706 Msa0426400:intron 40.0%
ATCCTATCTCTGACTGTGTT+TGG - chr3_2:76788692-76788711 None:intergenic 40.0%
TTTGTGCGACCTCAATTGAA+AGG + chr3_2:76788815-76788834 Msa0426400:intron 40.0%
CTAAACAAAAAGCTTGGGCA+AGG - chr3_2:76788937-76788956 None:intergenic 40.0%
!! TGCCCAAGCTTTTTGTTTAG+TGG + chr3_2:76788937-76788956 Msa0426400:CDS 40.0%
!! GCCCAAGCTTTTTGTTTAGT+GGG + chr3_2:76788938-76788957 Msa0426400:CDS 40.0%
CTCCCACTAAACAAAAAGCT+TGG - chr3_2:76788943-76788962 None:intergenic 40.0%
GGGAGAATTACAATTATCGG+CGG + chr3_2:76788958-76788977 Msa0426400:CDS 40.0%
! ACCTACTATCTTAGTTTGGC+TGG + chr3_2:76789023-76789042 Msa0426400:intron 40.0%
ACCAGCCAAACTAAGATAGT+AGG - chr3_2:76789027-76789046 None:intergenic 40.0%
CACTGCCGAAAAAAGTTACT+TGG - chr3_2:76789174-76789193 None:intergenic 40.0%
!!! CAAGTAACTTTTTTCGGCAG+TGG + chr3_2:76789172-76789191 Msa0426400:intron 40.0%
TAGCGTTACACTGGAAATCA+TGG + chr3_2:76789240-76789259 Msa0426400:intron 40.0%
TCACGCTAATTCTCATAGCA+AGG - chr3_2:76789283-76789302 None:intergenic 40.0%
ACCAAGTGCATGTAACCATA+TGG + chr3_2:76789305-76789324 Msa0426400:intron 40.0%
TCCATATGGTTACATGCACT+TGG - chr3_2:76789309-76789328 None:intergenic 40.0%
TGCATGTAACCATATGGAGA+GGG + chr3_2:76789311-76789330 Msa0426400:intron 40.0%
ATTCTCATTGCACTTCTCAG+CGG - chr3_2:76789352-76789371 None:intergenic 40.0%
! AAATGGCTAGTTGCTGCATT+TGG + chr3_2:76789419-76789438 Msa0426400:intron 40.0%
! AATGGCTAGTTGCTGCATTT+GGG + chr3_2:76789420-76789439 Msa0426400:intron 40.0%
AGGAGCTATTATATACGTCC+TGG + chr3_2:76789495-76789514 Msa0426400:intron 40.0%
GGAGCTATTATATACGTCCT+GGG + chr3_2:76789496-76789515 Msa0426400:intron 40.0%
AAGTCACTCAAATTCTACCC+AGG - chr3_2:76789516-76789535 None:intergenic 40.0%
GGTAGAATTTGAGTGACTTG+TGG + chr3_2:76789517-76789536 Msa0426400:intron 40.0%
TAAAATGCTCACGACCTGTA+TGG - chr3_2:76789580-76789599 None:intergenic 40.0%
! GGTCGTGAGCATTTTATCAT+AGG + chr3_2:76789584-76789603 Msa0426400:intron 40.0%
GAGTGAATGCATTTCCCATA+TGG + chr3_2:76789743-76789762 Msa0426400:intron 40.0%
TTCATCCGTCCAACTTTACT+TGG + chr3_2:76789895-76789914 Msa0426400:CDS 40.0%
TCATCCGTCCAACTTTACTT+GGG + chr3_2:76789896-76789915 Msa0426400:CDS 40.0%
AATAGTGCTGTCAACAGCAT+TGG + chr3_2:76789923-76789942 Msa0426400:CDS 40.0%
TTATGGACTTCATGCAGACT+TGG + chr3_2:76789973-76789992 Msa0426400:CDS 40.0%
!! CTCCTAAGGTACTGAAGATA+AGG - chr3_2:76790004-76790023 None:intergenic 40.0%
!! GGAAAAGCATTTGATTGGAG+AGG - chr3_2:76790051-76790070 None:intergenic 40.0%
! CAAATGCTTTTCCAGCAAAG+TGG + chr3_2:76790058-76790077 Msa0426400:three_prime_UTR 40.0%
AGATTGTCTCAAGATCAGTC+TGG + chr3_2:76790332-76790351 Msa0426400:three_prime_UTR 40.0%
ATCAGTCTGGATGGAATTTG+AGG + chr3_2:76790345-76790364 Msa0426400:three_prime_UTR 40.0%
GAAAGAAAAGATGTCCTGGT+TGG - chr3_2:76790481-76790500 None:intergenic 40.0%
GGCAAAGGAAGAAGAAAGAG+AGG + chr3_2:76782077-76782096 Msa0426400:five_prime_UTR 45.0%
! TCATTTCGACCCTTTTCACC+AGG + chr3_2:76782244-76782263 Msa0426400:CDS 45.0%
GTAGTACGTACCTGGTGAAA+AGG - chr3_2:76782257-76782276 None:intergenic 45.0%
!!! CGAAAGGCTCCTTTTGAAGT+TGG + chr3_2:76782589-76782608 Msa0426400:CDS 45.0%
TTCTTTGCCTAATTGCCACG+TGG + chr3_2:76783083-76783102 Msa0426400:intron 45.0%
TCTTTGCCTAATTGCCACGT+GGG + chr3_2:76783084-76783103 Msa0426400:intron 45.0%
AACTTTCCCACGTGGCAATT+AGG - chr3_2:76783093-76783112 None:intergenic 45.0%
TGCCACGTGGGAAAGTTTAT+TGG + chr3_2:76783096-76783115 Msa0426400:intron 45.0%
GCCACGTGGGAAAGTTTATT+GGG + chr3_2:76783097-76783116 Msa0426400:intron 45.0%
CCACGTGGGAAAGTTTATTG+GGG + chr3_2:76783098-76783117 Msa0426400:intron 45.0%
! CTGTCGAGAGACAGATTTTG+GGG + chr3_2:76783199-76783218 Msa0426400:intron 45.0%
CATTATTCTGGCATCAGGCA+TGG + chr3_2:76783317-76783336 Msa0426400:intron 45.0%
! AGTGTCGAATCATCAACAGG+AGG + chr3_2:76783412-76783431 Msa0426400:CDS 45.0%
GTGTCGAATCATCAACAGGA+GGG + chr3_2:76783413-76783432 Msa0426400:CDS 45.0%
GGAGAACAGCTTGAGTACTA+CGG + chr3_2:76783516-76783535 Msa0426400:CDS 45.0%
GAGAACAGCTTGAGTACTAC+GGG + chr3_2:76783517-76783536 Msa0426400:CDS 45.0%
GTAGGTAAATAGGGTTTCCG+AGG + chr3_2:76783836-76783855 Msa0426400:intron 45.0%
!! TTATGTCGGCTTAGAGCTTG+AGG + chr3_2:76783873-76783892 Msa0426400:intron 45.0%
! TTGAGGTGCCTATTCAGTCT+TGG + chr3_2:76783890-76783909 Msa0426400:intron 45.0%
GTTGTTCTCCCTAGTCCATA+AGG - chr3_2:76784057-76784076 None:intergenic 45.0%
! GGGAGAACAACTCACTGTTT+TGG + chr3_2:76784066-76784085 Msa0426400:intron 45.0%
AGAAACAATCGTTGCCTCGT+TGG + chr3_2:76784438-76784457 Msa0426400:intron 45.0%
AAGATGGTACAGTGCGTTTG+TGG + chr3_2:76784598-76784617 Msa0426400:intron 45.0%
AGTGTCTCCGTACCTGATAA+AGG + chr3_2:76784650-76784669 Msa0426400:CDS 45.0%
TCCGTACCTGATAAAGGAAG+AGG + chr3_2:76784656-76784675 Msa0426400:CDS 45.0%
GCCTCTTCCTTTATCAGGTA+CGG - chr3_2:76784660-76784679 None:intergenic 45.0%
ACCTGATAAAGGAAGAGGCA+TGG + chr3_2:76784661-76784680 Msa0426400:CDS 45.0%
ACCATGCCTCTTCCTTTATC+AGG - chr3_2:76784665-76784684 None:intergenic 45.0%
GAACCTGGTGAAACATCAGA+TGG - chr3_2:76784692-76784711 None:intergenic 45.0%
TGATGTTTCACCAGGTTCGT+TGG + chr3_2:76784694-76784713 Msa0426400:CDS 45.0%
AAGGAACTCTATCAGCAGGT+AGG - chr3_2:76785257-76785276 None:intergenic 45.0%
CTCGCACCAATGCCAAATAA+AGG + chr3_2:76785305-76785324 Msa0426400:CDS 45.0%
CACCAATGCCAAATAAAGGC+AGG + chr3_2:76785309-76785328 Msa0426400:CDS 45.0%
! CACCTGCCTTTATTTGGCAT+TGG - chr3_2:76785314-76785333 None:intergenic 45.0%
CAATGCCAAATAAAGGCAGG+TGG + chr3_2:76785312-76785331 Msa0426400:CDS 45.0%
TTTGCCCACCTGCCTTTATT+TGG - chr3_2:76785320-76785339 None:intergenic 45.0%
CCAGCCAAAACTATGTCAGA+AGG - chr3_2:76785507-76785526 None:intergenic 45.0%
!!! CCTTCTGACATAGTTTTGGC+TGG + chr3_2:76785504-76785523 Msa0426400:CDS 45.0%
! TTAGCACATTTGGGGTTGCA+TGG + chr3_2:76786797-76786816 Msa0426400:intron 45.0%
TGCTACGATAGGCAAACATG+AGG + chr3_2:76786952-76786971 Msa0426400:intron 45.0%
!! AGTAGCATTGACCCCAATCT+TGG + chr3_2:76787220-76787239 Msa0426400:intron 45.0%
TGATCGGAAACCATATGTCG+TGG - chr3_2:76787316-76787335 None:intergenic 45.0%
!! TGTTTTGCAGGTTGGGTTGT+GGG + chr3_2:76787463-76787482 Msa0426400:intron 45.0%
ACACTGCGCCAGAACAATTT+GGG - chr3_2:76787604-76787623 None:intergenic 45.0%
AACACTGCGCCAGAACAATT+TGG - chr3_2:76787605-76787624 None:intergenic 45.0%
AAATTGTTCTGGCGCAGTGT+TGG + chr3_2:76787604-76787623 Msa0426400:CDS 45.0%
GAGTTGGGAGCTTGGATATA+TGG + chr3_2:76787808-76787827 Msa0426400:intron 45.0%
GCTTCTGTTCATATTCACCC+TGG + chr3_2:76787933-76787952 Msa0426400:CDS 45.0%
CTGCATTTCAAACAGACTCC+AGG - chr3_2:76787954-76787973 None:intergenic 45.0%
ATGCAGTTCTTACCGTGATC+TGG + chr3_2:76787968-76787987 Msa0426400:CDS 45.0%
TTATCTAGCTAGCCCCCAAT+TGG - chr3_2:76788121-76788140 None:intergenic 45.0%
! GCTCATGCAGGATTGATAAC+TGG - chr3_2:76788149-76788168 None:intergenic 45.0%
ATATGGAAATGACAGGCTGC+AGG + chr3_2:76788221-76788240 Msa0426400:intron 45.0%
! ATCTCCTCCTCCTTTTCTCT+CGG + chr3_2:76788788-76788807 Msa0426400:intron 45.0%
AAACACACCGAGAGAAAAGG+AGG - chr3_2:76788798-76788817 None:intergenic 45.0%
CACAAACACACCGAGAGAAA+AGG - chr3_2:76788801-76788820 None:intergenic 45.0%
CAGTCCATGCCTTTCAATTG+AGG - chr3_2:76788827-76788846 None:intergenic 45.0%
TGGACTGTGTTCGACAAACA+AGG + chr3_2:76788840-76788859 Msa0426400:intron 45.0%
AAAGCGGGGAAGTAGAAGTT+TGG + chr3_2:76789089-76789108 Msa0426400:intron 45.0%
CTTGGTGGAACTCACGAAAT+TGG + chr3_2:76789209-76789228 Msa0426400:intron 45.0%
GATTTCCAGTGTAACGCTAC+AGG - chr3_2:76789239-76789258 None:intergenic 45.0%
GTGCATGTAACCATATGGAG+AGG + chr3_2:76789310-76789329 Msa0426400:intron 45.0%
AGGTCATTTCCCTCTCCATA+TGG - chr3_2:76789323-76789342 None:intergenic 45.0%
ATGGAGAGGGAAATGACCTA+TGG + chr3_2:76789324-76789343 Msa0426400:intron 45.0%
! AGTTGCTGCATTTGGGATAG+AGG + chr3_2:76789427-76789446 Msa0426400:intron 45.0%
! GTTGCTGCATTTGGGATAGA+GGG + chr3_2:76789428-76789447 Msa0426400:intron 45.0%
! TTGCTGCATTTGGGATAGAG+GGG + chr3_2:76789429-76789448 Msa0426400:intron 45.0%
!! TGGTGCCATTGAGAAATGAG+AGG + chr3_2:76789537-76789556 Msa0426400:intron 45.0%
GTCACCCAAGTAAAGTTGGA+CGG - chr3_2:76789903-76789922 None:intergenic 45.0%
!! GTCAACAGCATTGGTCGAAT+AGG + chr3_2:76789932-76789951 Msa0426400:CDS 45.0%
CACTTTATAGCCCACTTTGC+TGG - chr3_2:76790072-76790091 None:intergenic 45.0%
! AAGAAACACTGACTGCTGAG+CGG - chr3_2:76790194-76790213 None:intergenic 45.0%
TGTCTCAAGATCAGTCTGGA+TGG + chr3_2:76790336-76790355 Msa0426400:three_prime_UTR 45.0%
! AGGCTTTGCTGTAGTCAGAA+GGG + chr3_2:76790365-76790384 Msa0426400:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAAAAAG+CGG + chr3_2:76789073-76789092 Msa0426400:intron 5.0%
CCCCAATAAACTTTCCCACG+TGG - chr3_2:76783101-76783120 None:intergenic 50.0%
TCTGGCATCAGGCATGGTAT+AGG + chr3_2:76783323-76783342 Msa0426400:intron 50.0%
CATCAGGCATGGTATAGGAG+AGG + chr3_2:76783328-76783347 Msa0426400:intron 50.0%
GGCATGGTATAGGAGAGGAA+AGG + chr3_2:76783333-76783352 Msa0426400:intron 50.0%
AAGCTGTTCTCCTTCTGTCG+CGG - chr3_2:76783508-76783527 None:intergenic 50.0%
CCTGGTGAAACATCAGATGG+CGG - chr3_2:76784689-76784708 None:intergenic 50.0%
TCAGCATGAACCAACGAACC+TGG - chr3_2:76784707-76784726 None:intergenic 50.0%
CATTGGTGCGAGCAGTACAA+TGG - chr3_2:76785297-76785316 None:intergenic 50.0%
ATGTCAGAAGGCAGTACAGC+AGG - chr3_2:76785495-76785514 None:intergenic 50.0%
GGAGCTATGCTTGCCATCAA+TGG + chr3_2:76785787-76785806 Msa0426400:CDS 50.0%
! CATGGACTGTCAGATCAGTC+TGG + chr3_2:76786121-76786140 Msa0426400:CDS 50.0%
GGAATTGTCTTACGGTCCAC+AGG + chr3_2:76786523-76786542 Msa0426400:CDS 50.0%
!! CTGTTTTGCAGGTTGGGTTG+TGG + chr3_2:76787462-76787481 Msa0426400:intron 50.0%
GCATTTAGGAGTTGGGAGCT+TGG + chr3_2:76787800-76787819 Msa0426400:intron 50.0%
CACGTGAAGACTCCAGATCA+CGG - chr3_2:76787983-76788002 None:intergenic 50.0%
GCGACCTCAATTGAAAGGCA+TGG + chr3_2:76788820-76788839 Msa0426400:intron 50.0%
TTGTCATGGTCTGCTGTTGC+AGG + chr3_2:76788901-76788920 Msa0426400:intron 50.0%
TCCAGTGTAACGCTACAGGT+AGG - chr3_2:76789235-76789254 None:intergenic 50.0%
ACCAACTGCACGTAGCCATA+TGG + chr3_2:76789382-76789401 Msa0426400:intron 50.0%
TCCATATGGCTACGTGCAGT+TGG - chr3_2:76789386-76789405 None:intergenic 50.0%
TGCACGTAGCCATATGGAGA+GGG + chr3_2:76789388-76789407 Msa0426400:intron 50.0%
CTTGCTTATGGGTGCATCCA+TGG - chr3_2:76789695-76789714 None:intergenic 50.0%
! GAGGCTTTGCTGTAGTCAGA+AGG + chr3_2:76790364-76790383 Msa0426400:three_prime_UTR 50.0%
! GGCTTTGCTGTAGTCAGAAG+GGG + chr3_2:76790366-76790385 Msa0426400:three_prime_UTR 50.0%
! GCTTTGCTGTAGTCAGAAGG+GGG + chr3_2:76790367-76790386 Msa0426400:three_prime_UTR 50.0%
! TGTCACACACTTGGTTCTCG+AGG + chr3_2:76790404-76790423 Msa0426400:three_prime_UTR 50.0%
ACACTTACTACGGTCCAACC+AGG + chr3_2:76790464-76790483 Msa0426400:three_prime_UTR 50.0%
GGGAGAAGGTAGTACGTACC+TGG - chr3_2:76782265-76782284 None:intergenic 55.0%
GACCCTAGCTATGCTCTGTG+CGG + chr3_2:76782362-76782381 Msa0426400:CDS 55.0%
ACCCTAGCTATGCTCTGTGC+GGG + chr3_2:76782363-76782382 Msa0426400:CDS 55.0%
TCCCGCACAGAGCATAGCTA+GGG - chr3_2:76782367-76782386 None:intergenic 55.0%
TTCCCGCACAGAGCATAGCT+AGG - chr3_2:76782368-76782387 None:intergenic 55.0%
AGTAGTACAGCCGCGACAGA+AGG + chr3_2:76783495-76783514 Msa0426400:CDS 55.0%
AAAGGCAGGGGGCTTTCAAG+GGG - chr3_2:76784113-76784132 None:intergenic 55.0%
CAAAGGCAGGGGGCTTTCAA+GGG - chr3_2:76784114-76784133 None:intergenic 55.0%
ACAAAGGCAGGGGGCTTTCA+AGG - chr3_2:76784115-76784134 None:intergenic 55.0%
TGGTACAGTGCGTTTGTGGC+AGG + chr3_2:76784602-76784621 Msa0426400:intron 55.0%
CCGCCATCTGATGTTTCACC+AGG + chr3_2:76784686-76784705 Msa0426400:CDS 55.0%
GTCAGGAGTCTCCAGTTCTC+TGG - chr3_2:76784951-76784970 None:intergenic 55.0%
GTACAGTTCCAAGGGAGGTC+AGG - chr3_2:76784968-76784987 None:intergenic 55.0%
GGACTGTCAGATCAGTCTGG+AGG + chr3_2:76786124-76786143 Msa0426400:CDS 55.0%
AGCTTTGCCCACTCTGACCT+AGG - chr3_2:76786387-76786406 None:intergenic 55.0%
ACAACACAAGCCGTAGCAGC+TGG + chr3_2:76786491-76786510 Msa0426400:CDS 55.0%
CAACACAAGCCGTAGCAGCT+GGG + chr3_2:76786492-76786511 Msa0426400:CDS 55.0%
GCACAAAGCGCATCTGTGCA+AGG - chr3_2:76786718-76786737 None:intergenic 55.0%
CACACCGAGAGAAAAGGAGG+AGG - chr3_2:76788795-76788814 None:intergenic 55.0%
GCCTACCTGTAGCGTTACAC+TGG + chr3_2:76789231-76789250 Msa0426400:intron 55.0%
CTGCACGTAGCCATATGGAG+AGG + chr3_2:76789387-76789406 Msa0426400:intron 55.0%
! GAGGGGAAGCGTGATCTAGT+AGG + chr3_2:76789446-76789465 Msa0426400:intron 55.0%
CGTGATCTAGTAGGCTCCAC+AGG + chr3_2:76789455-76789474 Msa0426400:intron 55.0%
TGGAGACTCCTGACCTCCCT+TGG + chr3_2:76784957-76784976 Msa0426400:intron 60.0%
CAGCTGACACCCAGCTGCTA+CGG - chr3_2:76786504-76786523 None:intergenic 60.0%
GCACTTCTCAGCGGCACCAT+AGG - chr3_2:76789343-76789362 None:intergenic 60.0%
! ACACTGACTGCTGAGCGGCT+TGG - chr3_2:76790189-76790208 None:intergenic 60.0%
CGTAGCAGCTGGGTGTCAGC+TGG + chr3_2:76786502-76786521 Msa0426400:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76782067 76790532 76782067 ID=Msa0426400;Name=Msa0426400
chr3_2 mRNA 76782067 76790532 76782067 ID=Msa0426400-mRNA-1;Parent=Msa0426400;Name=Msa0426400-mRNA-1;_AED=0.11;_eAED=0.11;_QI=70|1|1|1|0.93|0.87|16|393|777
chr3_2 exon 76782067 76782265 76782067 ID=Msa0426400-mRNA-1:exon:19928;Parent=Msa0426400-mRNA-1
chr3_2 exon 76782344 76782478 76782344 ID=Msa0426400-mRNA-1:exon:19929;Parent=Msa0426400-mRNA-1
chr3_2 exon 76782583 76782669 76782583 ID=Msa0426400-mRNA-1:exon:19930;Parent=Msa0426400-mRNA-1
chr3_2 exon 76782799 76782870 76782799 ID=Msa0426400-mRNA-1:exon:19931;Parent=Msa0426400-mRNA-1
chr3_2 exon 76783334 76783538 76783334 ID=Msa0426400-mRNA-1:exon:19932;Parent=Msa0426400-mRNA-1
chr3_2 exon 76784624 76784742 76784624 ID=Msa0426400-mRNA-1:exon:19933;Parent=Msa0426400-mRNA-1
chr3_2 exon 76785204 76785593 76785204 ID=Msa0426400-mRNA-1:exon:19934;Parent=Msa0426400-mRNA-1
chr3_2 exon 76785691 76785825 76785691 ID=Msa0426400-mRNA-1:exon:19935;Parent=Msa0426400-mRNA-1
chr3_2 exon 76786052 76786192 76786052 ID=Msa0426400-mRNA-1:exon:19936;Parent=Msa0426400-mRNA-1
chr3_2 exon 76786389 76786544 76786389 ID=Msa0426400-mRNA-1:exon:19937;Parent=Msa0426400-mRNA-1
chr3_2 exon 76787473 76787685 76787473 ID=Msa0426400-mRNA-1:exon:19938;Parent=Msa0426400-mRNA-1
chr3_2 exon 76787879 76788036 76787879 ID=Msa0426400-mRNA-1:exon:19939;Parent=Msa0426400-mRNA-1
chr3_2 exon 76788236 76788350 76788236 ID=Msa0426400-mRNA-1:exon:19940;Parent=Msa0426400-mRNA-1
chr3_2 exon 76788923 76789003 76788923 ID=Msa0426400-mRNA-1:exon:19941;Parent=Msa0426400-mRNA-1
chr3_2 exon 76789836 76790200 76789836 ID=Msa0426400-mRNA-1:exon:19942;Parent=Msa0426400-mRNA-1
chr3_2 exon 76790307 76790532 76790307 ID=Msa0426400-mRNA-1:exon:19943;Parent=Msa0426400-mRNA-1
chr3_2 five_prime_UTR 76782067 76782136 76782067 ID=Msa0426400-mRNA-1:five_prime_utr;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76782137 76782265 76782137 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76782344 76782478 76782344 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76782583 76782669 76782583 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76782799 76782870 76782799 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76783334 76783538 76783334 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76784624 76784742 76784624 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76785204 76785593 76785204 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76785691 76785825 76785691 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76786052 76786192 76786052 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76786389 76786544 76786389 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76787473 76787685 76787473 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76787879 76788036 76787879 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76788236 76788350 76788236 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76788923 76789003 76788923 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 CDS 76789836 76790033 76789836 ID=Msa0426400-mRNA-1:cds;Parent=Msa0426400-mRNA-1
chr3_2 three_prime_UTR 76790034 76790200 76790034 ID=Msa0426400-mRNA-1:three_prime_utr;Parent=Msa0426400-mRNA-1
chr3_2 three_prime_UTR 76790307 76790532 76790307 ID=Msa0426400-mRNA-1:three_prime_utr;Parent=Msa0426400-mRNA-1
Gene Sequence

>Msa0426400

ATGGAGACTCTGAAAGGTGCGATTCCAGAGAAACTCAAACAAGCAATTAGGGATAGCACTGTAAACACTCTTAGCGACACATGTTCTTCTCTTCATAACTTCTTTCTTCATTTCGACCCTTTTCACCAGACTATGACTCAACTTGCAGACCCTAGCTATGCTCTGTGCGGGAAAAGCAAAGAAGCTGCGTTGAAATATAAGCAGCTTGGTAATCAATGCTTCTCTAATGCTGATTATGTCAAGGCTTTAGATTATTATACTCAGGCATTACGAAAGGCTCCTTTTGAAGTTGGTGAAATTGAAAATAATCTCATTGCAACTTTGTATATCAATCGAGCTACTGTATTGCATAAAATGAATCTTTCAGTAGAATGTTTGCGCGACTGTGATCGAGCTCTTCAGATATGTCCAAGCTATTCAAAGGCATGGTATAGGAGAGGAAAGGCAAATATTGCATTGGGAAATAATAGAGATGCAATCTGTGACTTAAATATAGCTAAGAGTGTCGAATCATCAACAGGAGGGAAGCGACAAATAGAATGTGAGCTGAAAATTATTTTAGACCAATCCAAGAGCACAAATATAGTAGTACAGCCGCGACAGAAGGAGAACAGCTTGAGTACTACGGGTGAGATGCCTCAAATAAAGCTGCAAAGTGTCTCCGTACCTGATAAAGGAAGAGGCATGGTGCCGCCATCTGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCATATGCTATGGTAATATTAAAGCAATGTCGTGAAACTCATTGCCATTATTGCTTGAACGACCTACCTGCTGATAGAGTTCCTTGTATATCGTGTTCAATACCATTGTACTGCTCGCACCAATGCCAAATAAAGGCAGGTGGGCAAATGTTCATGATATCCACAGAAGATAATTACGTTCTTAAAAACTTACCCAACAATCTTGCTGAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAGCAAAAGATTGGTAATGTTACTGAACATAAACATGAATGTCAAGGAGTGCATTGGCCTGCTGTACTGCCTTCTGACATAGTTTTGGCTGGCAGACTTCTAGCGAAGTTTTTGTCAAAGAACTCATCTGGAGATATCACAAGTTTTGTGGAAAAGTTGGAGCTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATTTGTACGCCATTGTATTGTTATATTGTCTTAAACATTCTTATGGAGCTATGCTTGCCATCAATGGAATCTCTATATCACAGGTGGTCATAGTTATTTCCCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTGTCAGATCAGTCTGGAGGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGCAAAGCTATTTATAAAGTTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCGCGCACACTCTATTTACGAACAACACAAGCCGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTACGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAGTTTTCTAAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTCAATCTATCTGACATCGTCCTCAATGCTTTTCATTGTGTGAACCCAAATTGTTCTGGCGCAGTGTTGGAAAGCAGAGTACTTGAATGTGAAAAGCAGAAAATCAAACACCTAGCTGTTGCTGATAAAGTTATCAAGAACGATGACATCTATGAAGTTTGTCTTCAATTTAACCAAAATGACGCTTCTGTTCATATTCACCCTGGAGTCTGTTTGAAATGCAGTTCTTACCGTGATCTGGAGTCTTCACGTGCAACAGTTGATAAAGCCTTAATATGCATAAAAAGGCTGCAGGATGCAATACTGTCAAAAGAAATTTCAAATACTTCCATTTCAGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGGCAGAAGACAACCTTGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCGGCGGATCATTGTAAAGCATCCATTCAGATTTTGGAGAAGATATATGATCCTGATGATATAGTTATTGCTTATGAACTTGTGAAGCTTTCATCCGTCCAACTTTACTTGGGTGACAATAGTGCTGTCAACAGCATTGGTCGAATAGGTGCTATTTTCTCACGTTATTATGGACTTCATGCAGACTTGGTCTTTCCTTATCTTCAGTACCTTAGGAGAGAAATTTAG

Protein sequence

>Msa0426400

METLKGAIPEKLKQAIRDSTVNTLSDTCSSLHNFFLHFDPFHQTMTQLADPSYALCGKSKEAALKYKQLGNQCFSNADYVKALDYYTQALRKAPFEVGEIENNLIATLYINRATVLHKMNLSVECLRDCDRALQICPSYSKAWYRRGKANIALGNNRDAICDLNIAKSVESSTGGKRQIECELKIILDQSKSTNIVVQPRQKENSLSTTGEMPQIKLQSVSVPDKGRGMVPPSDVSPGSLVHAEEPYAMVILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQIKAGGQMFMISTEDNYVLKNLPNNLAEYAAEVIQYNDCEQKIGNVTEHKHECQGVHWPAVLPSDIVLAGRLLAKFLSKNSSGDITSFVEKLELSHCYEHMPFESKLDSHLYAIVLLYCLKHSYGAMLAINGISISQVVIVISQIKVNCMTVVRLKSIDAHGLSDQSGGFPFHSSVHLTSNVEQVRVGKAIYKVGSLFNHSCQPNVHAYFLSRTLYLRTTQAVAAGCQLELSYGPQVGLWDCKDRQSFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLECEKQKIKHLAVADKVIKNDDIYEVCLQFNQNDASVHIHPGVCLKCSSYRDLESSRATVDKALICIKRLQDAILSKEISNTSISDALRSLHLLRSNLHAYNKVIAEAEDNLAQAFCLVGELQLSADHCKASIQILEKIYDPDDIVIAYELVKLSSVQLYLGDNSAVNSIGRIGAIFSRYYGLHADLVFPYLQYLRREI*