Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231240 | XP_003626976.1 | 91.983 | 237 | 16 | 2 | 1 | 237 | 1 | 234 | 5.14e-119 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1231240 | -0.819901 | 9.105237e-53 | -8.615850e-47 |
| Msa0002490 | Msa1231240 | 0.800034 | 1.741255e-48 | -8.615850e-47 |
| Msa0006110 | Msa1231240 | 0.819158 | 1.345125e-52 | -8.615850e-47 |
| Msa0017510 | Msa1231240 | 0.820234 | 7.638178e-53 | -8.615850e-47 |
| Msa0018620 | Msa1231240 | 0.800421 | 1.453012e-48 | -8.615850e-47 |
| Msa0044020 | Msa1231240 | 0.805306 | 1.422661e-49 | -8.615850e-47 |
| Msa0045490 | Msa1231240 | 0.806115 | 9.622422e-50 | -8.615850e-47 |
| Msa0048000 | Msa1231240 | 0.806280 | 8.881632e-50 | -8.615850e-47 |
| Msa0052680 | Msa1231240 | 0.801670 | 8.069473e-49 | -8.615850e-47 |
| Msa0052730 | Msa1231240 | 0.800333 | 1.513960e-48 | -8.615850e-47 |
| Msa0072900 | Msa1231240 | 0.803441 | 3.480503e-49 | -8.615850e-47 |
| Msa0074240 | Msa1231240 | 0.801712 | 7.909924e-49 | -8.615850e-47 |
| Msa0076000 | Msa1231240 | 0.821017 | 5.048775e-53 | -8.615850e-47 |
| Msa0078650 | Msa1231240 | 0.812488 | 4.134577e-51 | -8.615850e-47 |
| Msa0094120 | Msa1231240 | 0.806164 | 9.394588e-50 | -8.615850e-47 |
| Msa0100000 | Msa1231240 | 0.825854 | 3.735495e-54 | -8.615850e-47 |
| Msa0101810 | Msa1231240 | -0.818470 | 1.928067e-52 | -8.615850e-47 |
| Msa0109900 | Msa1231240 | 0.803420 | 3.516035e-49 | -8.615850e-47 |
| Msa0120040 | Msa1231240 | -0.804099 | 2.541657e-49 | -8.615850e-47 |
| Msa0619070 | Msa1231240 | 0.813641 | 2.309792e-51 | -8.615850e-47 |
| Msa0619470 | Msa1231240 | 0.807499 | 4.905634e-50 | -8.615850e-47 |
| Msa0638070 | Msa1231240 | 0.837972 | 3.791270e-57 | -8.615850e-47 |
| Msa0639430 | Msa1231240 | 0.807888 | 4.056816e-50 | -8.615850e-47 |
| Msa0643180 | Msa1231240 | 0.807168 | 5.767843e-50 | -8.615850e-47 |
| Msa0643220 | Msa1231240 | 0.812730 | 3.659511e-51 | -8.615850e-47 |
| Msa0647980 | Msa1231240 | 0.822805 | 1.946127e-53 | -8.615850e-47 |
| Msa0652450 | Msa1231240 | 0.819159 | 1.344673e-52 | -8.615850e-47 |
| Msa0657970 | Msa1231240 | 0.806840 | 6.765935e-50 | -8.615850e-47 |
| Msa0662570 | Msa1231240 | 0.803074 | 4.146874e-49 | -8.615850e-47 |
| Msa0663380 | Msa1231240 | 0.801468 | 8.875851e-49 | -8.615850e-47 |
| Msa0664910 | Msa1231240 | 0.809570 | 1.772695e-50 | -8.615850e-47 |
| Msa0682330 | Msa1231240 | 0.822367 | 2.460730e-53 | -8.615850e-47 |
| Msa0682900 | Msa1231240 | 0.819516 | 1.114685e-52 | -8.615850e-47 |
| Msa0684500 | Msa1231240 | 0.819013 | 1.451146e-52 | -8.615850e-47 |
| Msa0691050 | Msa1231240 | 0.821977 | 3.030228e-53 | -8.615850e-47 |
| Msa0692230 | Msa1231240 | 0.806188 | 9.288723e-50 | -8.615850e-47 |
| Msa0693380 | Msa1231240 | 0.834330 | 3.190735e-56 | -8.615850e-47 |
| Msa0696640 | Msa1231240 | 0.809085 | 2.251989e-50 | -8.615850e-47 |
| Msa0698060 | Msa1231240 | 0.800963 | 1.126297e-48 | -8.615850e-47 |
| Msa0701280 | Msa1231240 | 0.807784 | 4.268430e-50 | -8.615850e-47 |
| Msa0708520 | Msa1231240 | 0.803362 | 3.614151e-49 | -8.615850e-47 |
| Msa0715470 | Msa1231240 | 0.814398 | 1.571944e-51 | -8.615850e-47 |
| Msa0720820 | Msa1231240 | 0.807200 | 5.677946e-50 | -8.615850e-47 |
| Msa0731940 | Msa1231240 | 0.800853 | 1.186025e-48 | -8.615850e-47 |
| Msa0735170 | Msa1231240 | 0.807471 | 4.974596e-50 | -8.615850e-47 |
| Msa0743200 | Msa1231240 | 0.805344 | 1.397068e-49 | -8.615850e-47 |
| Msa0744040 | Msa1231240 | 0.824943 | 6.135582e-54 | -8.615850e-47 |
| Msa0745790 | Msa1231240 | 0.807312 | 5.375250e-50 | -8.615850e-47 |
| Msa0754720 | Msa1231240 | -0.809799 | 1.582813e-50 | -8.615850e-47 |
| Msa0756630 | Msa1231240 | -0.802290 | 6.018761e-49 | -8.615850e-47 |
| Msa0757500 | Msa1231240 | -0.801551 | 8.537463e-49 | -8.615850e-47 |
| Msa0761940 | Msa1231240 | 0.822309 | 2.538211e-53 | -8.615850e-47 |
| Msa0796530 | Msa1231240 | 0.808300 | 3.314859e-50 | -8.615850e-47 |
| Msa0808270 | Msa1231240 | 0.806088 | 9.745946e-50 | -8.615850e-47 |
| Msa0810220 | Msa1231240 | 0.812943 | 3.287515e-51 | -8.615850e-47 |
| Msa0816700 | Msa1231240 | 0.803083 | 4.128592e-49 | -8.615850e-47 |
| Msa0816710 | Msa1231240 | 0.807517 | 4.863470e-50 | -8.615850e-47 |
| Msa0824660 | Msa1231240 | 0.803313 | 3.701018e-49 | -8.615850e-47 |
| Msa0825340 | Msa1231240 | 0.819306 | 1.244421e-52 | -8.615850e-47 |
| Msa0828850 | Msa1231240 | 0.804094 | 2.547121e-49 | -8.615850e-47 |
| Msa0829620 | Msa1231240 | 0.804442 | 2.156360e-49 | -8.615850e-47 |
| Msa0841940 | Msa1231240 | 0.804005 | 2.658206e-49 | -8.615850e-47 |
| Msa0124340 | Msa1231240 | 0.816914 | 4.325589e-52 | -8.615850e-47 |
| Msa0126370 | Msa1231240 | 0.802566 | 5.278458e-49 | -8.615850e-47 |
| Msa0141340 | Msa1231240 | 0.801567 | 8.471149e-49 | -8.615850e-47 |
| Msa0149000 | Msa1231240 | 0.819219 | 1.302905e-52 | -8.615850e-47 |
| Msa0150800 | Msa1231240 | 0.805307 | 1.422025e-49 | -8.615850e-47 |
| Msa0157290 | Msa1231240 | 0.820213 | 7.725372e-53 | -8.615850e-47 |
| Msa0164980 | Msa1231240 | 0.812679 | 3.755907e-51 | -8.615850e-47 |
| Msa0170140 | Msa1231240 | 0.803840 | 2.876719e-49 | -8.615850e-47 |
| Msa0170570 | Msa1231240 | 0.809491 | 1.843639e-50 | -8.615850e-47 |
| Msa0185590 | Msa1231240 | 0.827431 | 1.570339e-54 | -8.615850e-47 |
| Msa0188830 | Msa1231240 | 0.812637 | 3.835358e-51 | -8.615850e-47 |
| Msa0191250 | Msa1231240 | 0.807772 | 4.292490e-50 | -8.615850e-47 |
| Msa0205850 | Msa1231240 | 0.821430 | 4.054435e-53 | -8.615850e-47 |
| Msa0210450 | Msa1231240 | 0.802453 | 5.571323e-49 | -8.615850e-47 |
| Msa0215320 | Msa1231240 | -0.803115 | 4.067194e-49 | -8.615850e-47 |
| Msa0216240 | Msa1231240 | 0.829053 | 6.381386e-55 | -8.615850e-47 |
| Msa0222920 | Msa1231240 | 0.816824 | 4.530153e-52 | -8.615850e-47 |
| Msa0223690 | Msa1231240 | 0.813589 | 2.371498e-51 | -8.615850e-47 |
| Msa0225740 | Msa1231240 | 0.808274 | 3.356366e-50 | -8.615850e-47 |
| Msa0227400 | Msa1231240 | 0.814283 | 1.667304e-51 | -8.615850e-47 |
| Msa1231240 | Msa1231550 | 0.813924 | 2.000521e-51 | -8.615850e-47 |
| Msa1231240 | Msa1235740 | 0.848533 | 5.769149e-60 | -8.615850e-47 |
| Msa1231240 | Msa1252190 | 0.807778 | 4.279960e-50 | -8.615850e-47 |
| Msa1231240 | Msa1284260 | 0.808595 | 2.867675e-50 | -8.615850e-47 |
| Msa1231240 | Msa1292830 | 0.808999 | 2.349961e-50 | -8.615850e-47 |
| Msa1231240 | Msa1297290 | 0.803703 | 3.071514e-49 | -8.615850e-47 |
| Msa1231240 | Msa1311960 | 0.926364 | 5.188529e-91 | -8.615850e-47 |
| Msa1231240 | Msa1314340 | 0.818107 | 2.329013e-52 | -8.615850e-47 |
| Msa1231240 | Msa1327050 | 0.811904 | 5.544060e-51 | -8.615850e-47 |
| Msa1231240 | Msa1331910 | 0.811572 | 6.546752e-51 | -8.615850e-47 |
| Msa1231240 | Msa1331920 | 0.813544 | 2.426076e-51 | -8.615850e-47 |
| Msa1231240 | Msa1336710 | 0.805704 | 1.174067e-49 | -8.615850e-47 |
| Msa1231240 | Msa1340650 | 0.809297 | 2.028868e-50 | -8.615850e-47 |
| Msa1231240 | Msa1341570 | 0.814367 | 1.597055e-51 | -8.615850e-47 |
| Msa1231240 | Msa1343070 | 0.810479 | 1.129672e-50 | -8.615850e-47 |
| Msa1231240 | Msa1346370 | 0.835922 | 1.265573e-56 | -8.615850e-47 |
| Msa1231240 | Msa1348880 | 0.818498 | 1.899436e-52 | -8.615850e-47 |
| Msa1231240 | Msa1353060 | 0.801473 | 8.855449e-49 | -8.615850e-47 |
| Msa1231240 | Msa1353470 | 0.846532 | 2.047039e-59 | -8.615850e-47 |
| Msa1231240 | Msa1366600 | 0.807321 | 5.352201e-50 | -8.615850e-47 |
| Msa1231240 | Msa1371640 | 0.825633 | 4.214634e-54 | -8.615850e-47 |
| Msa1231240 | Msa1376200 | 0.803009 | 4.275891e-49 | -8.615850e-47 |
| Msa1231240 | Msa1379850 | 0.814857 | 1.244553e-51 | -8.615850e-47 |
| Msa1231240 | Msa1384350 | 0.816892 | 4.374282e-52 | -8.615850e-47 |
| Msa1231240 | Msa1385000 | 0.804739 | 1.869179e-49 | -8.615850e-47 |
| Msa1231240 | Msa1390230 | 0.800344 | 1.506264e-48 | -8.615850e-47 |
| Msa1231240 | Msa1392260 | 0.832574 | 8.746798e-56 | -8.615850e-47 |
| Msa1231240 | Msa1398890 | 0.804513 | 2.084099e-49 | -8.615850e-47 |
| Msa1231240 | Msa1404540 | 0.817191 | 3.747052e-52 | -8.615850e-47 |
| Msa1231240 | Msa1408620 | -0.819656 | 1.035934e-52 | -8.615850e-47 |
| Msa1231240 | Msa1409870 | 0.819832 | 9.440322e-53 | -8.615850e-47 |
| Msa1231240 | Msa1410470 | 0.801229 | 9.935109e-49 | -8.615850e-47 |
| Msa1231240 | Msa1423350 | 0.808442 | 3.090802e-50 | -8.615850e-47 |
| Msa1231240 | Msa1423880 | 0.806462 | 8.131229e-50 | -8.615850e-47 |
| Msa1231240 | Msa1429900 | 0.827288 | 1.699193e-54 | -8.615850e-47 |
| Msa1231240 | Msa1431060 | 0.800637 | 1.312752e-48 | -8.615850e-47 |
| Msa1231240 | Msa1439960 | 0.804093 | 2.548684e-49 | -8.615850e-47 |
| Msa1231240 | Msa1460020 | 0.824310 | 8.651346e-54 | -8.615850e-47 |
| Msa1231240 | Msa1461300 | 0.827286 | 1.701550e-54 | -8.615850e-47 |
| Msa1231240 | Msa1466540 | 0.805579 | 1.247269e-49 | -8.615850e-47 |
| Msa0366240 | Msa1231240 | 0.818921 | 1.523052e-52 | -8.615850e-47 |
| Msa0369850 | Msa1231240 | 0.801232 | 9.923125e-49 | -8.615850e-47 |
| Msa0376590 | Msa1231240 | 0.817668 | 2.926556e-52 | -8.615850e-47 |
| Msa0389340 | Msa1231240 | 0.820709 | 5.944152e-53 | -8.615850e-47 |
| Msa0406880 | Msa1231240 | 0.807722 | 4.400054e-50 | -8.615850e-47 |
| Msa0410650 | Msa1231240 | 0.807653 | 4.550603e-50 | -8.615850e-47 |
| Msa0414170 | Msa1231240 | 0.810419 | 1.163383e-50 | -8.615850e-47 |
| Msa0415810 | Msa1231240 | 0.826830 | 2.187453e-54 | -8.615850e-47 |
| Msa0417270 | Msa1231240 | 0.808314 | 3.290816e-50 | -8.615850e-47 |
| Msa0421780 | Msa1231240 | -0.805508 | 1.290334e-49 | -8.615850e-47 |
| Msa0423360 | Msa1231240 | -0.810509 | 1.112652e-50 | -8.615850e-47 |
| Msa0423520 | Msa1231240 | 0.810605 | 1.060836e-50 | -8.615850e-47 |
| Msa0436370 | Msa1231240 | 0.816122 | 6.507224e-52 | -8.615850e-47 |
| Msa0460930 | Msa1231240 | 0.809412 | 1.916921e-50 | -8.615850e-47 |
| Msa0466390 | Msa1231240 | 0.833499 | 5.150165e-56 | -8.615850e-47 |
| Msa0467900 | Msa1231240 | -0.804017 | 2.643413e-49 | -8.615850e-47 |
| Msa0467960 | Msa1231240 | -0.802380 | 5.766507e-49 | -8.615850e-47 |
| Msa0990960 | Msa1231240 | 0.802728 | 4.887393e-49 | -8.615850e-47 |
| Msa0999100 | Msa1231240 | 0.803525 | 3.344968e-49 | -8.615850e-47 |
| Msa1024740 | Msa1231240 | 0.838251 | 3.212709e-57 | -8.615850e-47 |
| Msa1027630 | Msa1231240 | 0.800699 | 1.275089e-48 | -8.615850e-47 |
| Msa1031770 | Msa1231240 | 0.802904 | 4.496242e-49 | -8.615850e-47 |
| Msa1037700 | Msa1231240 | -0.807501 | 4.901032e-50 | -8.615850e-47 |
| Msa1045200 | Msa1231240 | 0.805929 | 1.052662e-49 | -8.615850e-47 |
| Msa1052830 | Msa1231240 | 0.802947 | 4.404883e-49 | -8.615850e-47 |
| Msa1080160 | Msa1231240 | 0.815017 | 1.146841e-51 | -8.615850e-47 |
| Msa1081560 | Msa1231240 | 0.802584 | 5.233880e-49 | -8.615850e-47 |
| Msa1082500 | Msa1231240 | 0.825517 | 4.490824e-54 | -8.615850e-47 |
| Msa1083210 | Msa1231240 | 0.803944 | 2.737421e-49 | -8.615850e-47 |
| Msa1084260 | Msa1231240 | 0.818690 | 1.718071e-52 | -8.615850e-47 |
| Msa1085200 | Msa1231240 | 0.805602 | 1.232971e-49 | -8.615850e-47 |
| Msa1102770 | Msa1231240 | 0.840218 | 9.924717e-58 | -8.615850e-47 |
| Msa0241190 | Msa1231240 | 0.817529 | 3.146128e-52 | -8.615850e-47 |
| Msa0243710 | Msa1231240 | 0.807545 | 4.797846e-50 | -8.615850e-47 |
| Msa0244860 | Msa1231240 | 0.810095 | 1.366637e-50 | -8.615850e-47 |
| Msa0245940 | Msa1231240 | 0.818860 | 1.572621e-52 | -8.615850e-47 |
| Msa0257460 | Msa1231240 | 0.812999 | 3.195475e-51 | -8.615850e-47 |
| Msa0258760 | Msa1231240 | 0.803094 | 4.107445e-49 | -8.615850e-47 |
| Msa0260810 | Msa1231240 | 0.814027 | 1.898484e-51 | -8.615850e-47 |
| Msa0260820 | Msa1231240 | -0.807060 | 6.078411e-50 | -8.615850e-47 |
| Msa0262510 | Msa1231240 | 0.815233 | 1.026954e-51 | -8.615850e-47 |
| Msa0264150 | Msa1231240 | 0.806635 | 7.475762e-50 | -8.615850e-47 |
| Msa0270100 | Msa1231240 | 0.816433 | 5.543684e-52 | -8.615850e-47 |
| Msa0271530 | Msa1231240 | 0.832718 | 8.054330e-56 | -8.615850e-47 |
| Msa0274360 | Msa1231240 | 0.812440 | 4.235714e-51 | -8.615850e-47 |
| Msa0276920 | Msa1231240 | 0.838965 | 2.101104e-57 | -8.615850e-47 |
| Msa0282250 | Msa1231240 | 0.802274 | 6.064611e-49 | -8.615850e-47 |
| Msa0283450 | Msa1231240 | 0.820046 | 8.434580e-53 | -8.615850e-47 |
| Msa0283520 | Msa1231240 | 0.822240 | 2.632849e-53 | -8.615850e-47 |
| Msa0284520 | Msa1231240 | 0.818010 | 2.449300e-52 | -8.615850e-47 |
| Msa0287310 | Msa1231240 | 0.815174 | 1.058102e-51 | -8.615850e-47 |
| Msa0287650 | Msa1231240 | 0.833350 | 5.610207e-56 | -8.615850e-47 |
| Msa0305700 | Msa1231240 | 0.820622 | 6.221716e-53 | -8.615850e-47 |
| Msa0316800 | Msa1231240 | 0.821716 | 3.483313e-53 | -8.615850e-47 |
| Msa0323080 | Msa1231240 | 0.808308 | 3.300837e-50 | -8.615850e-47 |
| Msa0325850 | Msa1231240 | 0.809636 | 1.716070e-50 | -8.615850e-47 |
| Msa0326520 | Msa1231240 | 0.804532 | 2.064484e-49 | -8.615850e-47 |
| Msa0332000 | Msa1231240 | 0.819003 | 1.459284e-52 | -8.615850e-47 |
| Msa0334040 | Msa1231240 | 0.822450 | 2.353516e-53 | -8.615850e-47 |
| Msa0334350 | Msa1231240 | 0.818457 | 1.940822e-52 | -8.615850e-47 |
| Msa0334360 | Msa1231240 | 0.824820 | 6.561862e-54 | -8.615850e-47 |
| Msa0338110 | Msa1231240 | 0.809605 | 1.742631e-50 | -8.615850e-47 |
| Msa0341540 | Msa1231240 | 0.800679 | 1.287199e-48 | -8.615850e-47 |
| Msa0350990 | Msa1231240 | 0.825315 | 5.011982e-54 | -8.615850e-47 |
| Msa0351030 | Msa1231240 | 0.825413 | 4.751646e-54 | -8.615850e-47 |
| Msa0351100 | Msa1231240 | 0.819373 | 1.201760e-52 | -8.615850e-47 |
| Msa1108790 | Msa1231240 | 0.819802 | 9.594041e-53 | -8.615850e-47 |
| Msa1119540 | Msa1231240 | 0.807820 | 4.192469e-50 | -8.615850e-47 |
| Msa1123380 | Msa1231240 | 0.805378 | 1.374427e-49 | -8.615850e-47 |
| Msa1124310 | Msa1231240 | 0.813527 | 2.446740e-51 | -8.615850e-47 |
| Msa1125470 | Msa1231240 | 0.802371 | 5.791389e-49 | -8.615850e-47 |
| Msa1127130 | Msa1231240 | 0.801729 | 7.846860e-49 | -8.615850e-47 |
| Msa1127890 | Msa1231240 | 0.803577 | 3.262048e-49 | -8.615850e-47 |
| Msa1130270 | Msa1231240 | -0.818006 | 2.455020e-52 | -8.615850e-47 |
| Msa1137570 | Msa1231240 | 0.812748 | 3.626400e-51 | -8.615850e-47 |
| Msa1140690 | Msa1231240 | 0.811797 | 5.849435e-51 | -8.615850e-47 |
| Msa1147900 | Msa1231240 | 0.833856 | 4.193206e-56 | -8.615850e-47 |
| Msa1151910 | Msa1231240 | 0.806464 | 8.121121e-50 | -8.615850e-47 |
| Msa1152510 | Msa1231240 | 0.811182 | 7.957864e-51 | -8.615850e-47 |
| Msa1162550 | Msa1231240 | -0.805446 | 1.330032e-49 | -8.615850e-47 |
| Msa1166410 | Msa1231240 | 0.802979 | 4.338004e-49 | -8.615850e-47 |
| Msa1170280 | Msa1231240 | 0.800697 | 1.276311e-48 | -8.615850e-47 |
| Msa1172670 | Msa1231240 | 0.816332 | 5.840347e-52 | -8.615850e-47 |
| Msa1179460 | Msa1231240 | 0.803040 | 4.213392e-49 | -8.615850e-47 |
| Msa1186950 | Msa1231240 | -0.809258 | 2.067723e-50 | -8.615850e-47 |
| Msa1193290 | Msa1231240 | 0.833469 | 5.240010e-56 | -8.615850e-47 |
| Msa1214880 | Msa1231240 | 0.816404 | 5.628486e-52 | -8.615850e-47 |
| Msa1214890 | Msa1231240 | 0.818442 | 1.955972e-52 | -8.615850e-47 |
| Msa1217860 | Msa1231240 | 0.803348 | 3.638417e-49 | -8.615850e-47 |
| Msa1218600 | Msa1231240 | 0.803692 | 3.087536e-49 | -8.615850e-47 |
| Msa0484780 | Msa1231240 | 0.830819 | 2.369594e-55 | -8.615850e-47 |
| Msa0484840 | Msa1231240 | 0.805213 | 1.487876e-49 | -8.615850e-47 |
| Msa0489790 | Msa1231240 | 0.802891 | 4.523110e-49 | -8.615850e-47 |
| Msa0495320 | Msa1231240 | 0.820335 | 7.243239e-53 | -8.615850e-47 |
| Msa0495330 | Msa1231240 | 0.813382 | 2.632635e-51 | -8.615850e-47 |
| Msa0505770 | Msa1231240 | 0.838007 | 3.712358e-57 | -8.615850e-47 |
| Msa0506890 | Msa1231240 | 0.832724 | 8.029684e-56 | -8.615850e-47 |
| Msa0507680 | Msa1231240 | 0.806307 | 8.766492e-50 | -8.615850e-47 |
| Msa0509610 | Msa1231240 | 0.822115 | 2.815583e-53 | -8.615850e-47 |
| Msa0516370 | Msa1231240 | 0.821806 | 3.320208e-53 | -8.615850e-47 |
| Msa0526890 | Msa1231240 | 0.813873 | 2.053219e-51 | -8.615850e-47 |
| Msa0532710 | Msa1231240 | 0.822903 | 1.846502e-53 | -8.615850e-47 |
| Msa0545070 | Msa1231240 | 0.813653 | 2.295213e-51 | -8.615850e-47 |
| Msa0546680 | Msa1231240 | 0.806882 | 6.629278e-50 | -8.615850e-47 |
| Msa0547360 | Msa1231240 | 0.820384 | 7.057004e-53 | -8.615850e-47 |
| Msa0547720 | Msa1231240 | 0.819013 | 1.451343e-52 | -8.615850e-47 |
| Msa0557070 | Msa1231240 | 0.850225 | 1.948708e-60 | -8.615850e-47 |
| Msa0568820 | Msa1231240 | 0.817515 | 3.168260e-52 | -8.615850e-47 |
| Msa0572420 | Msa1231240 | 0.813992 | 1.932749e-51 | -8.615850e-47 |
| Msa0574760 | Msa1231240 | -0.831017 | 2.118864e-55 | -8.615850e-47 |
| Msa0843780 | Msa1231240 | -0.805026 | 1.628161e-49 | -8.615850e-47 |
| Msa0850960 | Msa1231240 | 0.831181 | 1.930376e-55 | -8.615850e-47 |
| Msa0863370 | Msa1231240 | 0.817163 | 3.803378e-52 | -8.615850e-47 |
| Msa0866520 | Msa1231240 | 0.807879 | 4.073108e-50 | -8.615850e-47 |
| Msa0867890 | Msa1231240 | 0.813413 | 2.592454e-51 | -8.615850e-47 |
| Msa0870530 | Msa1231240 | 0.810463 | 1.138232e-50 | -8.615850e-47 |
| Msa0875620 | Msa1231240 | 0.808248 | 3.400729e-50 | -8.615850e-47 |
| Msa0876200 | Msa1231240 | 0.803951 | 2.728521e-49 | -8.615850e-47 |
| Msa0880140 | Msa1231240 | 0.816914 | 4.325092e-52 | -8.615850e-47 |
| Msa0881020 | Msa1231240 | 0.810847 | 9.405746e-51 | -8.615850e-47 |
| Msa0896750 | Msa1231240 | 0.813321 | 2.715389e-51 | -8.615850e-47 |
| Msa0898670 | Msa1231240 | 0.804219 | 2.399292e-49 | -8.615850e-47 |
| Msa0903700 | Msa1231240 | 0.817140 | 3.847715e-52 | -8.615850e-47 |
| Msa0907070 | Msa1231240 | 0.800420 | 1.453587e-48 | -8.615850e-47 |
| Msa0930910 | Msa1231240 | -0.824881 | 6.346869e-54 | -8.615850e-47 |
| Msa0933230 | Msa1231240 | 0.824234 | 9.012453e-54 | -8.615850e-47 |
| Msa0933310 | Msa1231240 | 0.828580 | 8.307726e-55 | -8.615850e-47 |
| Msa0954130 | Msa1231240 | 0.803277 | 3.764484e-49 | -8.615850e-47 |
| Msa0954550 | Msa1231240 | 0.809951 | 1.468059e-50 | -8.615850e-47 |
| Msa0969520 | Msa1231240 | 0.815644 | 8.318674e-52 | -8.615850e-47 |
| Msa0971090 | Msa1231240 | 0.822603 | 2.168266e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231240 | MtrunA17_Chr8g0340131 | 91.983 | 237 | 16 | 2 | 1 | 237 | 1 | 234 | 4.73e-123 | 348 |
| Msa1231240 | MtrunA17_Chr7g0236051 | 51.327 | 113 | 44 | 2 | 125 | 237 | 238 | 339 | 6.09e-29 | 111 |
| Msa1231240 | MtrunA17_Chr4g0075411 | 83.673 | 49 | 8 | 0 | 189 | 237 | 169 | 217 | 7.78e-27 | 103 |
| Msa1231240 | MtrunA17_Chr2g0289321 | 67.742 | 62 | 20 | 0 | 176 | 237 | 152 | 213 | 3.42e-26 | 101 |
| Msa1231240 | MtrunA17_Chr3g0110201 | 49.107 | 112 | 49 | 2 | 126 | 237 | 249 | 352 | 4.40e-25 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231240 | AT3G25030.3 | 35.246 | 244 | 108 | 7 | 3 | 237 | 8 | 210 | 1.50e-36 | 128 |
| Msa1231240 | AT3G25030.1 | 35.039 | 254 | 135 | 7 | 3 | 237 | 8 | 250 | 6.02e-35 | 125 |
| Msa1231240 | AT3G25030.4 | 35.039 | 254 | 135 | 7 | 3 | 237 | 8 | 250 | 6.02e-35 | 125 |
| Msa1231240 | AT3G25030.2 | 35.039 | 254 | 135 | 7 | 3 | 237 | 8 | 250 | 6.02e-35 | 125 |
| Msa1231240 | AT4G13100.5 | 31.206 | 282 | 114 | 6 | 3 | 237 | 8 | 256 | 3.73e-32 | 118 |
| Msa1231240 | AT4G13100.3 | 31.206 | 282 | 114 | 6 | 3 | 237 | 8 | 256 | 3.73e-32 | 118 |
| Msa1231240 | AT4G13100.8 | 31.522 | 276 | 124 | 8 | 3 | 237 | 8 | 259 | 4.38e-31 | 115 |
| Msa1231240 | AT4G13100.7 | 31.522 | 276 | 124 | 8 | 3 | 237 | 8 | 259 | 4.38e-31 | 115 |
| Msa1231240 | AT4G13100.9 | 31.522 | 276 | 124 | 8 | 3 | 237 | 8 | 259 | 4.38e-31 | 115 |
| Msa1231240 | AT4G13100.1 | 31.522 | 276 | 124 | 8 | 3 | 237 | 8 | 259 | 4.38e-31 | 115 |
| Msa1231240 | AT4G13100.4 | 31.522 | 276 | 124 | 8 | 3 | 237 | 5 | 256 | 5.22e-31 | 115 |
| Msa1231240 | AT4G13100.2 | 49.593 | 123 | 43 | 2 | 119 | 237 | 158 | 265 | 1.94e-30 | 114 |
| Msa1231240 | AT4G22250.1 | 58.025 | 81 | 34 | 0 | 157 | 237 | 134 | 214 | 1.20e-27 | 105 |
| Msa1231240 | AT4G03965.1 | 45.000 | 120 | 42 | 2 | 121 | 237 | 111 | 209 | 2.73e-26 | 101 |
| Msa1231240 | AT1G62370.1 | 71.429 | 49 | 14 | 0 | 189 | 237 | 156 | 204 | 1.68e-23 | 94.4 |
| Msa1231240 | AT3G07120.1 | 45.370 | 108 | 54 | 1 | 130 | 237 | 258 | 360 | 6.33e-23 | 95.9 |
Find 37 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAGAAAACGGCGTCGTTT+TGG | 0.283292 | 8_2:-7352345 | None:intergenic |
| GAATGTGTTCAAGGGAGCTT+TGG | 0.356101 | 8_2:+7352893 | Msa1231240:CDS |
| GATCCGACGGAATTTCTTCC+CGG | 0.365380 | 8_2:+7352598 | Msa1231240:CDS |
| GGAAGAGAGTGAAATTGAAT+TGG | 0.374216 | 8_2:+7352675 | Msa1231240:CDS |
| ACATTAACAACAACGTTGTT+TGG | 0.375493 | 8_2:-7352418 | None:intergenic |
| CGTAAAGTGTTATTCTTTGA+CGG | 0.401030 | 8_2:-7352273 | None:intergenic |
| GTATAATATCTAAGAGTGTT+TGG | 0.411313 | 8_2:-7352384 | None:intergenic |
| GAAGAAGAGGAAAGAGAAGA+AGG | 0.412992 | 8_2:+7352775 | Msa1231240:CDS |
| AAATTCCGTCGGATCTGAAT+TGG | 0.419938 | 8_2:-7352590 | None:intergenic |
| CATGTCGTTGATGGATTTGT+TGG | 0.421193 | 8_2:+7352654 | Msa1231240:CDS |
| GTGTGTATGGTGAGGGATAA+AGG | 0.427186 | 8_2:+7352835 | Msa1231240:CDS |
| AATGTGTTCAAGGGAGCTTT+GGG | 0.432008 | 8_2:+7352894 | Msa1231240:CDS |
| AGGAGAAGGGAGTAATGTTA+AGG | 0.433410 | 8_2:+7352795 | Msa1231240:CDS |
| AAAATCATGGAAAGCTTTCA+AGG | 0.440126 | 8_2:+7352495 | Msa1231240:CDS |
| GCAGGTTAGCATGTCGTTGA+TGG | 0.473676 | 8_2:+7352645 | Msa1231240:CDS |
| AGGAAAGAGAAGAAGGAGAA+GGG | 0.480424 | 8_2:+7352782 | Msa1231240:CDS |
| GAGGAAAGAGAAGAAGGAGA+AGG | 0.500274 | 8_2:+7352781 | Msa1231240:CDS |
| ACACAATTGTTGCGTGTGTA+TGG | 0.501642 | 8_2:+7352822 | Msa1231240:CDS |
| TTGTTAAAGATCGAAAATCA+TGG | 0.528304 | 8_2:+7352482 | Msa1231240:CDS |
| GCTAACCTGCGCCGTCTCAT+CGG | 0.529102 | 8_2:-7352632 | None:intergenic |
| TCATCGGAAAACTCGCCGCC+GGG | 0.552591 | 8_2:-7352616 | None:intergenic |
| AGAAGGGAGTAATGTTAAGG+TGG | 0.555525 | 8_2:+7352798 | Msa1231240:CDS |
| CTCATCGGAAAACTCGCCGC+CGG | 0.561315 | 8_2:-7352617 | None:intergenic |
| CTGCAAAACGTGTGTCCACA+TGG | 0.562500 | 8_2:-7352871 | None:intergenic |
| TGAACTTCTAGTGTTGCTTG+TGG | 0.565142 | 8_2:-7352308 | None:intergenic |
| AGTAGTGACGTTGGTGATGA+AGG | 0.567789 | 8_2:+7352703 | Msa1231240:CDS |
| AGGGAGCTTTGGGTTAGTAG+AGG | 0.575720 | 8_2:+7352904 | Msa1231240:CDS |
| AAAATAAAATGATTGCAAAG+AGG | 0.605793 | 8_2:-7352934 | None:intergenic |
| TCCGACCAATTCAGATCCGA+CGG | 0.610865 | 8_2:+7352585 | Msa1231240:CDS |
| TTGTTGCGTGTGTATGGTGA+GGG | 0.665548 | 8_2:+7352828 | Msa1231240:CDS |
| CCGCCGGGAAGAAATTCCGT+CGG | 0.673552 | 8_2:-7352601 | None:intergenic |
| TCCGTCGGATCTGAATTGGT+CGG | 0.675352 | 8_2:-7352586 | None:intergenic |
| ATTGTTGCGTGTGTATGGTG+AGG | 0.686096 | 8_2:+7352827 | Msa1231240:CDS |
| GGTGCAGCGTTTATACCATG+TGG | 0.688981 | 8_2:+7352856 | Msa1231240:CDS |
| TCACCAACAACAACAAAACG+AGG | 0.705279 | 8_2:+7352558 | Msa1231240:CDS |
| TGGTGATGAAGGTGATGACG+TGG | 0.717305 | 8_2:+7352714 | Msa1231240:CDS |
| TTGGAACGAAGTAGTGACGT+TGG | 0.731633 | 8_2:+7352694 | Msa1231240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATGATTGCAAAG+AGG | - | chr8_2:7352937-7352956 | None:intergenic | 20.0% |
| !!! | GTATAATATCTAAGAGTGTT+TGG | - | chr8_2:7352387-7352406 | None:intergenic | 25.0% |
| ! | TTGTTAAAGATCGAAAATCA+TGG | + | chr8_2:7352482-7352501 | Msa1231240:CDS | 25.0% |
| ! | CGTAAAGTGTTATTCTTTGA+CGG | - | chr8_2:7352276-7352295 | None:intergenic | 30.0% |
| !!! | GTTTTTTTGGTTGGAGAAAA+CGG | - | chr8_2:7352359-7352378 | None:intergenic | 30.0% |
| !!! | TTGGTTTGTGTTTTTTTGGT+TGG | - | chr8_2:7352368-7352387 | None:intergenic | 30.0% |
| !!! | GTGTTTGGTTTGTGTTTTTT+TGG | - | chr8_2:7352372-7352391 | None:intergenic | 30.0% |
| ACATTAACAACAACGTTGTT+TGG | - | chr8_2:7352421-7352440 | None:intergenic | 30.0% | |
| ! | GTTATTGTTGTTGTTGTTGT+CGG | - | chr8_2:7352452-7352471 | None:intergenic | 30.0% |
| AAAATCATGGAAAGCTTTCA+AGG | + | chr8_2:7352495-7352514 | Msa1231240:CDS | 30.0% | |
| AGAAGAAGAAAAAGAAGAAG+AGG | + | chr8_2:7352762-7352781 | Msa1231240:CDS | 30.0% | |
| !!! | TATCCTCGTTTTGTTGTTGT+TGG | - | chr8_2:7352564-7352583 | None:intergenic | 35.0% |
| GGAAGAGAGTGAAATTGAAT+TGG | + | chr8_2:7352675-7352694 | Msa1231240:CDS | 35.0% | |
| ! | GTTTTGCAGAATGTGTTCAA+GGG | + | chr8_2:7352885-7352904 | Msa1231240:CDS | 35.0% |
| !! | TGAACTTCTAGTGTTGCTTG+TGG | - | chr8_2:7352311-7352330 | None:intergenic | 40.0% |
| TCACCAACAACAACAAAACG+AGG | + | chr8_2:7352558-7352577 | Msa1231240:CDS | 40.0% | |
| AAATTCCGTCGGATCTGAAT+TGG | - | chr8_2:7352593-7352612 | None:intergenic | 40.0% | |
| !! | CATGTCGTTGATGGATTTGT+TGG | + | chr8_2:7352654-7352673 | Msa1231240:CDS | 40.0% |
| GAAGAAGAGGAAAGAGAAGA+AGG | + | chr8_2:7352775-7352794 | Msa1231240:CDS | 40.0% | |
| AGGAAAGAGAAGAAGGAGAA+GGG | + | chr8_2:7352782-7352801 | Msa1231240:CDS | 40.0% | |
| AGGAGAAGGGAGTAATGTTA+AGG | + | chr8_2:7352795-7352814 | Msa1231240:CDS | 40.0% | |
| AGAAGGGAGTAATGTTAAGG+TGG | + | chr8_2:7352798-7352817 | Msa1231240:CDS | 40.0% | |
| ACACAATTGTTGCGTGTGTA+TGG | + | chr8_2:7352822-7352841 | Msa1231240:CDS | 40.0% | |
| ! | CGTTTTGCAGAATGTGTTCA+AGG | + | chr8_2:7352884-7352903 | Msa1231240:CDS | 40.0% |
| AATGTGTTCAAGGGAGCTTT+GGG | + | chr8_2:7352894-7352913 | Msa1231240:CDS | 40.0% | |
| TTGGAACGAAGTAGTGACGT+TGG | + | chr8_2:7352694-7352713 | Msa1231240:CDS | 45.0% | |
| !! | AGTAGTGACGTTGGTGATGA+AGG | + | chr8_2:7352703-7352722 | Msa1231240:CDS | 45.0% |
| GAGGAAAGAGAAGAAGGAGA+AGG | + | chr8_2:7352781-7352800 | Msa1231240:CDS | 45.0% | |
| ATTGTTGCGTGTGTATGGTG+AGG | + | chr8_2:7352827-7352846 | Msa1231240:CDS | 45.0% | |
| TTGTTGCGTGTGTATGGTGA+GGG | + | chr8_2:7352828-7352847 | Msa1231240:CDS | 45.0% | |
| GTGTGTATGGTGAGGGATAA+AGG | + | chr8_2:7352835-7352854 | Msa1231240:CDS | 45.0% | |
| GAATGTGTTCAAGGGAGCTT+TGG | + | chr8_2:7352893-7352912 | Msa1231240:CDS | 45.0% | |
| ! | TGGAGAAAACGGCGTCGTTT+TGG | - | chr8_2:7352348-7352367 | None:intergenic | 50.0% |
| TCCGACCAATTCAGATCCGA+CGG | + | chr8_2:7352585-7352604 | Msa1231240:CDS | 50.0% | |
| TCCGTCGGATCTGAATTGGT+CGG | - | chr8_2:7352589-7352608 | None:intergenic | 50.0% | |
| GATCCGACGGAATTTCTTCC+CGG | + | chr8_2:7352598-7352617 | Msa1231240:CDS | 50.0% | |
| GCAGGTTAGCATGTCGTTGA+TGG | + | chr8_2:7352645-7352664 | Msa1231240:CDS | 50.0% | |
| ! | TGGTGATGAAGGTGATGACG+TGG | + | chr8_2:7352714-7352733 | Msa1231240:CDS | 50.0% |
| GGTGCAGCGTTTATACCATG+TGG | + | chr8_2:7352856-7352875 | Msa1231240:CDS | 50.0% | |
| CTGCAAAACGTGTGTCCACA+TGG | - | chr8_2:7352874-7352893 | None:intergenic | 50.0% | |
| !! | AGGGAGCTTTGGGTTAGTAG+AGG | + | chr8_2:7352904-7352923 | Msa1231240:CDS | 50.0% |
| ! | CGGCGAGTTTTCCGATGAGA+CGG | + | chr8_2:7352621-7352640 | Msa1231240:CDS | 55.0% |
| CCGCCGGGAAGAAATTCCGT+CGG | - | chr8_2:7352604-7352623 | None:intergenic | 60.0% | |
| CCGACGGAATTTCTTCCCGG+CGG | + | chr8_2:7352601-7352620 | Msa1231240:CDS | 60.0% | |
| TCATCGGAAAACTCGCCGCC+GGG | - | chr8_2:7352619-7352638 | None:intergenic | 60.0% | |
| CTCATCGGAAAACTCGCCGC+CGG | - | chr8_2:7352620-7352639 | None:intergenic | 60.0% | |
| ! | GTTTTCCGATGAGACGGCGC+AGG | + | chr8_2:7352627-7352646 | Msa1231240:CDS | 60.0% |
| GCTAACCTGCGCCGTCTCAT+CGG | - | chr8_2:7352635-7352654 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 7352265 | 7352978 | 7352265 | ID=Msa1231240;Name=Msa1231240 |
| chr8_2 | mRNA | 7352265 | 7352978 | 7352265 | ID=Msa1231240-mRNA-1;Parent=Msa1231240;Name=Msa1231240-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|237 |
| chr8_2 | exon | 7352265 | 7352978 | 7352265 | ID=Msa1231240-mRNA-1:exon:2748;Parent=Msa1231240-mRNA-1 |
| chr8_2 | CDS | 7352265 | 7352978 | 7352265 | ID=Msa1231240-mRNA-1:cds;Parent=Msa1231240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
