AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1170730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1170730 MtrunA17_Chr3g0128421 97.044 778 22 1 1 777 1 778 0.0 1559
Msa1170730 MtrunA17_Chr3g0115061 22.430 321 188 10 459 766 182 454 2.43e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1170730 AT1G33400.1 44.949 792 416 7 1 776 1 788 0.0 684
Msa1170730 AT1G33400.2 44.800 750 394 7 43 776 55 800 0.0 662
Msa1170730 AT1G33400.3 44.320 625 328 7 168 776 2 622 0.0 538

Find 158 sgRNAs with CRISPR-Local

Find 521 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCCATTTGAAAGTAAAT+TGG 0.199937 7_4:+64149572 Msa1170730:CDS
AACACTGCGCCAGAACAATT+TGG 0.217761 7_4:-64151460 None:intergenic
TTTGCCCACCTGCCTTTATT+TGG 0.225137 7_4:-64149175 None:intergenic
AGAAACTCAAACAAGCAATT+AGG 0.229319 7_4:+64146024 Msa1170730:CDS
TATTGTCTTAAACATTCTTA+TGG 0.241604 7_4:+64149624 Msa1170730:CDS
TTGTTGTCGATGTAGTTAAA+TGG 0.243220 7_4:+64154151 Msa1170730:intron
ATAACGTAGTCTCGTGAATA+TGG 0.244246 7_4:+64154360 Msa1170730:three_prime_UTR
TACTACTATATTTGTGCTCT+TGG 0.267628 7_4:-64147337 None:intergenic
TATGAACAGAAGCGTCATTT+TGG 0.281117 7_4:-64151781 None:intergenic
TCATACAATTCACTTTAATC+TGG 0.303169 7_4:-64149927 None:intergenic
AAGCCTTAATATGCATAAAA+AGG 0.306459 7_4:+64151873 Msa1170730:CDS
CACTTTATAGCCCACTTTGC+TGG 0.311906 7_4:-64153928 None:intergenic
TGGTGTAGAGGAAGAAGATA+TGG 0.318513 7_4:+64145977 Msa1170730:exon
AGAAAATATGCATGAACATT+TGG 0.324630 7_4:-64150304 None:intergenic
ACTGCCTTCTGACATAGTTT+TGG 0.338485 7_4:+64149358 Msa1170730:CDS
AAATTTGCATGCATACAATA+AGG 0.339149 7_4:+64152175 Msa1170730:CDS
TTCATCCGTCCAACTTTACT+TGG 0.341657 7_4:+64153754 Msa1170730:CDS
AGTGGGAGAATTACAATTAT+CGG 0.343600 7_4:+64152813 Msa1170730:CDS
ACCATGCCTCTTCCTTTATC+AGG 0.346989 7_4:-64148520 None:intergenic
GAAACTCAAACAAGCAATTA+GGG 0.353034 7_4:+64146025 Msa1170730:CDS
AGCTTAAATGACAGGTCATT+TGG 0.360209 7_4:+64153971 Msa1170730:three_prime_UTR
ATTGCTTGTTTGAGTTTCTC+TGG 0.360886 7_4:-64146020 None:intergenic
CACCTGCCTTTATTTGGCAT+TGG 0.370556 7_4:-64149169 None:intergenic
TTGCTGGAAAAGCATTTGAT+TGG 0.382988 7_4:-64153912 None:intergenic
TGTTGTCGATGTAGTTAAAT+GGG 0.396158 7_4:+64154152 Msa1170730:intron
CTATATTTGTGCTCTTGGAT+TGG 0.397564 7_4:-64147332 None:intergenic
ACACTGCGCCAGAACAATTT+GGG 0.399716 7_4:-64151459 None:intergenic
GGCAAAGGAAGAAGAAAGAG+AGG 0.401323 7_4:+64145936 Msa1170730:five_prime_UTR
TTCCTTATCTTCAGTACCTT+AGG 0.401357 7_4:+64153858 Msa1170730:CDS
TGATATAGAGATTCCATTGA+TGG 0.401639 7_4:-64149658 None:intergenic
GGAGCTATGCTTGCCATCAA+TGG 0.404119 7_4:+64149645 Msa1170730:CDS
CTCGCACCAATGCCAAATAA+AGG 0.406668 7_4:+64149163 Msa1170730:CDS
GGCAAAGCTATTTATAAAGT+TGG 0.408738 7_4:+64150256 Msa1170730:CDS
TTGTTTCTTACCATAGCATA+TGG 0.409749 7_4:-64148589 None:intergenic
AGCATATTCAGCAAGATTGT+TGG 0.410224 7_4:-64149243 None:intergenic
TCAATTTCACCAACTTCAAA+AGG 0.415930 7_4:-64146456 None:intergenic
TGTGTGAACCCAAATTGTTC+TGG 0.426197 7_4:+64151451 Msa1170730:CDS
ATGCAGTTCTTACCGTGATC+TGG 0.426263 7_4:+64151826 Msa1170730:CDS
ATTTCTAAATTTCTCTCCTA+AGG 0.427458 7_4:-64153874 None:intergenic
TCATTGTAAAGCATCCATTC+AGG 0.429879 7_4:+64152840 Msa1170730:CDS
GCATATTCAGCAAGATTGTT+GGG 0.430584 7_4:-64149242 None:intergenic
CTCCTAAGGTACTGAAGATA+AGG 0.430916 7_4:-64153860 None:intergenic
GAATCCAATTTACTTTCAAA+TGG 0.433870 7_4:-64149576 None:intergenic
GTAGGTCGTTCAAGCAATAA+TGG 0.435815 7_4:-64149094 None:intergenic
AGATCTCAAAGCGTCTGAAA+TGG 0.439734 7_4:-64152135 None:intergenic
TTTAACTAGTAATGTGGAAC+AGG 0.443391 7_4:+64150029 Msa1170730:CDS
GAACATTTGGTTGGCAAGAA+TGG 0.445371 7_4:-64150291 None:intergenic
ATCAGTCTGGATGGAATTTG+AGG 0.445545 7_4:+64154204 Msa1170730:three_prime_UTR
AAATGTACACTGGAATGAAA+TGG 0.446196 7_4:-64150009 None:intergenic
ACAACACAAGCCGTAGCAGC+TGG 0.447881 7_4:+64150349 Msa1170730:CDS
AATGATTGTGAGCAAAAGAT+TGG 0.447994 7_4:+64149284 Msa1170730:CDS
GTAGTACGTACCTGGTGAAA+AGG 0.449674 7_4:-64146113 None:intergenic
CCGCCATCTGATGTTTCACC+AGG 0.449958 7_4:+64148544 Msa1170730:CDS
GCCTCTTCCTTTATCAGGTA+CGG 0.454469 7_4:-64148515 None:intergenic
GCATTTCATTGTCAATGTAC+TGG 0.457687 7_4:+64151382 Msa1170730:CDS
TTATGGACTTCATGCAGACT+TGG 0.466543 7_4:+64153832 Msa1170730:CDS
GGAAAGGCAAATATTGCATT+GGG 0.466884 7_4:+64147207 Msa1170730:CDS
TCTGGCATCAGGCATGGTAT+AGG 0.467429 7_4:+64147181 Msa1170730:intron
AAACACACCTTTGAATAGCT+TGG 0.472303 7_4:-64146714 None:intergenic
CATACAATTCACTTTAATCT+GGG 0.482197 7_4:-64149926 None:intergenic
AGGCTTTGCTGTAGTCAGAA+GGG 0.482651 7_4:+64154224 Msa1170730:three_prime_UTR
CATGGACTGTCAGATCAGTC+TGG 0.483310 7_4:+64149979 Msa1170730:CDS
ACACTTTGCAGCTTTATTTG+AGG 0.485080 7_4:-64148490 None:intergenic
AATATGCATGAACATTTGGT+TGG 0.489714 7_4:-64150300 None:intergenic
AGTGTCTCCGTACCTGATAA+AGG 0.493636 7_4:+64148508 Msa1170730:CDS
AAGAGTGTCGAATCATCAAC+AGG 0.494373 7_4:+64147267 Msa1170730:CDS
TAAGCAATAACTATATCATC+AGG 0.495058 7_4:-64153716 None:intergenic
CGTAGCAGCTGGGTGTCAGC+TGG 0.497449 7_4:+64150360 Msa1170730:CDS
GTCAACAGCATTGGTCGAAT+AGG 0.497911 7_4:+64153791 Msa1170730:CDS
AAATTGTTCTGGCGCAGTGT+TGG 0.499251 7_4:+64151462 Msa1170730:CDS
TATTGTTATAACACTTACTA+CGG 0.506825 7_4:+64154313 Msa1170730:three_prime_UTR
ATGTCAGAAGGCAGTACAGC+AGG 0.510667 7_4:-64149350 None:intergenic
GGCTTTAGATTATTATACTC+AGG 0.514932 7_4:+64146316 Msa1170730:CDS
TAACGTAGTCTCGTGAATAT+GGG 0.522517 7_4:+64154361 Msa1170730:three_prime_UTR
AAGAGAGGGAAAGAAAACAA+AGG 0.526427 7_4:+64145951 Msa1170730:five_prime_UTR
TGATGTTTCACCAGGTTCGT+TGG 0.526556 7_4:+64148552 Msa1170730:CDS
GAGGCTTTGCTGTAGTCAGA+AGG 0.526857 7_4:+64154223 Msa1170730:three_prime_UTR
AAACAAAGGAAGTGGTGTAG+AGG 0.527368 7_4:+64145965 Msa1170730:five_prime_UTR
TAGTACGTACCTGGTGAAAA+GGG 0.527455 7_4:-64146112 None:intergenic
CTCTAATGCTGATTATGTCA+AGG 0.527726 7_4:+64146295 Msa1170730:CDS
TGTCAGCTGGAATTGTCTTA+CGG 0.527745 7_4:+64150373 Msa1170730:CDS
AGGAAAGGCAAATATTGCAT+TGG 0.532015 7_4:+64147206 Msa1170730:CDS
GGGAAAGAAAACAAAGGAAG+TGG 0.532284 7_4:+64145957 Msa1170730:five_prime_UTR
GGAAAAGCATTTGATTGGAG+AGG 0.538529 7_4:-64153907 None:intergenic
GGAATTGTCTTACGGTCCAC+AGG 0.539785 7_4:+64150381 Msa1170730:CDS
TATTGTCACCCAAGTAAAGT+TGG 0.540829 7_4:-64153763 None:intergenic
TTAAAATCAATAGACGCTCA+TGG 0.541128 7_4:+64149961 Msa1170730:CDS
AAGAACGTAATTATCTTCTG+TGG 0.542033 7_4:-64149210 None:intergenic
CAATGGAATCTCTATATCAC+AGG 0.542199 7_4:+64149662 Msa1170730:CDS
CACGAGAGGTGGTTTGATGT+TGG 0.542732 7_4:+64145915 None:intergenic
TGCTGAAGAACCATATGCTA+TGG 0.542990 7_4:+64148579 Msa1170730:CDS
CTGCATTTCAAACAGACTCC+AGG 0.545321 7_4:-64151809 None:intergenic
GGAGAACAGCTTGAGTACTA+CGG 0.546828 7_4:+64147374 Msa1170730:CDS
TTCCCGCACAGAGCATAGCT+AGG 0.547122 7_4:-64146224 None:intergenic
ATACAAGGAACTCTATCAGC+AGG 0.548739 7_4:-64149116 None:intergenic
TCAATCACAGCTTAAATGAC+AGG 0.549658 7_4:+64153963 Msa1170730:three_prime_UTR
ATATTTACATGTCACACACT+TGG 0.549891 7_4:+64154254 Msa1170730:three_prime_UTR
AGATTGTCTCAAGATCAGTC+TGG 0.551035 7_4:+64154191 Msa1170730:three_prime_UTR
CACCAATGCCAAATAAAGGC+AGG 0.551316 7_4:+64149167 Msa1170730:CDS
TCATCCGTCCAACTTTACTT+GGG 0.552845 7_4:+64153755 Msa1170730:CDS
AGTGTGTGACATGTAAATAT+CGG 0.554543 7_4:-64154251 None:intergenic
ACACTGACTGCTGAGCGGCT+TGG 0.554958 7_4:-64154045 None:intergenic
CAGCTGACACCCAGCTGCTA+CGG 0.561855 7_4:-64150359 None:intergenic
GAAAGAAAAGATGTCCTGGT+TGG 0.562187 7_4:-64154337 None:intergenic
AGTAGTACAGCCGCGACAGA+AGG 0.563195 7_4:+64147353 Msa1170730:CDS
ACCCTAGCTATGCTCTGTGC+GGG 0.563516 7_4:+64146222 Msa1170730:CDS
TCCGTACCTGATAAAGGAAG+AGG 0.569385 7_4:+64148514 Msa1170730:CDS
GAGAACAGCTTGAGTACTAC+GGG 0.569449 7_4:+64147375 Msa1170730:CDS
TCCCGCACAGAGCATAGCTA+GGG 0.570994 7_4:-64146223 None:intergenic
AATAGTGCTGTCAACAGCAT+TGG 0.571018 7_4:+64153782 Msa1170730:CDS
TCAGCATGAACCAACGAACC+TGG 0.571881 7_4:-64148562 None:intergenic
GATATGTCCAAGCTATTCAA+AGG 0.573360 7_4:+64146707 Msa1170730:CDS
ATGAATGTCAAGGAGTGCAT+TGG 0.576376 7_4:+64149327 Msa1170730:CDS
TTACTTTATCAGCAACAGCT+AGG 0.576576 7_4:-64151525 None:intergenic
TTATGAAAGAAAAGATGTCC+TGG 0.578078 7_4:-64154341 None:intergenic
GGCTTTGCTGTAGTCAGAAG+GGG 0.580864 7_4:+64154225 Msa1170730:three_prime_UTR
TGTCTCAAGATCAGTCTGGA+TGG 0.581811 7_4:+64154195 Msa1170730:three_prime_UTR
AGGTGGTTTGATGTTGGCAA+AGG 0.584111 7_4:+64145921 None:intergenic
CAATGCCAAATAAAGGCAGG+TGG 0.596184 7_4:+64149170 Msa1170730:CDS
CCAGCCAAAACTATGTCAGA+AGG 0.604974 7_4:-64149362 None:intergenic
TGTACATTTAACTAGTAATG+TGG 0.607675 7_4:+64150023 Msa1170730:CDS
ATATGGAAATGACAGGCTGC+AGG 0.608699 7_4:+64152079 Msa1170730:intron
TGAAATATAGGCATTACGAA+AGG 0.609774 7_4:+64146431 Msa1170730:intron
ATTACTAGTTAAATGTACAC+TGG 0.610954 7_4:-64150019 None:intergenic
TGCATTTCAAACAGACTCCA+GGG 0.616596 7_4:-64151808 None:intergenic
GAACATAAACATGAATGTCA+AGG 0.620275 7_4:+64149317 Msa1170730:CDS
CATTGGTGCGAGCAGTACAA+TGG 0.620389 7_4:-64149152 None:intergenic
CAACACAAGCCGTAGCAGCT+GGG 0.623688 7_4:+64150350 Msa1170730:CDS
ACACTTACTACGGTCCAACC+AGG 0.624236 7_4:+64154323 Msa1170730:three_prime_UTR
TTGGTATGAAAGATCTACAA+TGG 0.624289 7_4:+64153990 Msa1170730:three_prime_UTR
ACCTGATAAAGGAAGAGGCA+TGG 0.627081 7_4:+64148519 Msa1170730:CDS
GAAGATATGGAGACTCTGAA+AGG 0.628550 7_4:+64145990 Msa1170730:exon
GCAAAGGAAGAAGAAAGAGA+GGG 0.630138 7_4:+64145937 Msa1170730:five_prime_UTR
GTGTCGAATCATCAACAGGA+GGG 0.630754 7_4:+64147271 Msa1170730:CDS
GGTATTGAACACGATATACA+AGG 0.636863 7_4:-64149131 None:intergenic
GTCACCCAAGTAAAGTTGGA+CGG 0.637144 7_4:-64153759 None:intergenic
TATATCTCCTAGGTCAGAGT+GGG 0.639961 7_4:+64150235 Msa1170730:intron
CACGTGAAGACTCCAGATCA+CGG 0.641430 7_4:-64151838 None:intergenic
GCTTCTGTTCATATTCACCC+TGG 0.643407 7_4:+64151791 Msa1170730:CDS
GCGTTGAAATATAAGCAGCT+TGG 0.647283 7_4:+64146260 Msa1170730:CDS
ATACAATAAGGTTATTGCAG+AGG 0.648948 7_4:+64152187 Msa1170730:CDS
GACCCTAGCTATGCTCTGTG+CGG 0.649554 7_4:+64146221 Msa1170730:CDS
TGTCACACACTTGGTTCTCG+AGG 0.654841 7_4:+64154263 Msa1170730:three_prime_UTR
AATGCCAAATAAAGGCAGGT+GGG 0.655407 7_4:+64149171 Msa1170730:CDS
AAGGAACTCTATCAGCAGGT+AGG 0.661361 7_4:-64149112 None:intergenic
CATCAGGCATGGTATAGGAG+AGG 0.668519 7_4:+64147186 Msa1170730:intron
AAGACAATATAACAATACAA+TGG 0.671651 7_4:-64149610 None:intergenic
GAACCTGGTGAAACATCAGA+TGG 0.672386 7_4:-64148547 None:intergenic
TCACACAATGAAAAGCATTG+AGG 0.676894 7_4:-64151435 None:intergenic
GGGAGAATTACAATTATCGG+CGG 0.684311 7_4:+64152816 Msa1170730:CDS
AAGCTGTTCTCCTTCTGTCG+CGG 0.691374 7_4:-64147363 None:intergenic
AGTGTCGAATCATCAACAGG+AGG 0.693713 7_4:+64147270 Msa1170730:CDS
GGACTGTCAGATCAGTCTGG+AGG 0.695431 7_4:+64149982 Msa1170730:CDS
GGCATGGTATAGGAGAGGAA+AGG 0.699336 7_4:+64147191 Msa1170730:intron
GCTTTGCTGTAGTCAGAAGG+GGG 0.705999 7_4:+64154226 Msa1170730:three_prime_UTR
CCTGGTGAAACATCAGATGG+CGG 0.706873 7_4:-64148544 None:intergenic
TTATATCTCCTAGGTCAGAG+TGG 0.711387 7_4:+64150234 Msa1170730:intron
AAGAAACACTGACTGCTGAG+CGG 0.726873 7_4:-64154050 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTTCAATATGATA+GGG + chr7_4:64149795-64149814 Msa1170730:intron 10.0%
!!! ATTATTATTACTTAGTTTTT+TGG + chr7_4:64150433-64150452 Msa1170730:intron 10.0%
!! AAATAAAATAAATCAAAACA+TGG + chr7_4:64151212-64151231 Msa1170730:intron 10.0%
!! AAAAAAAAAAAAAAAAAAGC+GGG + chr7_4:64152933-64152952 Msa1170730:intron 10.0%
!! TTATTAATAGTGAGAAATTA+GGG - chr7_4:64146160-64146179 None:intergenic 15.0%
!! AATAAACTAAGATTACAAAA+AGG - chr7_4:64146751-64146770 None:intergenic 15.0%
!! ATTTATCAAAACAAAGTAAT+TGG + chr7_4:64146906-64146925 Msa1170730:intron 15.0%
!! AAAGATTGAAATATTTATGT+CGG + chr7_4:64147717-64147736 Msa1170730:intron 15.0%
!!! TTTTTTTCCTTTGTTTTTTT+GGG + chr7_4:64149699-64149718 Msa1170730:intron 15.0%
!!! GAATATTTTTTCAATATGAT+AGG + chr7_4:64149794-64149813 Msa1170730:intron 15.0%
!! TATGATAATTTAGACATTAT+TGG + chr7_4:64150157-64150176 Msa1170730:intron 15.0%
!! AACTAAGTAATAATAATTAC+AGG - chr7_4:64150430-64150449 None:intergenic 15.0%
!!! TTTTATTTTTTTATGTTGAG+TGG - chr7_4:64151200-64151219 None:intergenic 15.0%
!!! AAAAAATGAAGTGTTTTAAA+GGG - chr7_4:64151714-64151733 None:intergenic 15.0%
!!! TTTTTTTTTTTTTAGCAGAA+TGG - chr7_4:64152913-64152932 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAAAGCG+GGG + chr7_4:64152934-64152953 Msa1170730:intron 15.0%
!! GTTATTAATAGTGAGAAATT+AGG - chr7_4:64146161-64146180 None:intergenic 20.0%
!!! TTCTCTCTTTTCTTTATTTT+TGG + chr7_4:64146384-64146403 Msa1170730:intron 20.0%
!!! GTTTTTGCAATTTGAAATAT+AGG + chr7_4:64146419-64146438 Msa1170730:intron 20.0%
!! TTAAAAAGTGATTATGAATG+TGG - chr7_4:64146567-64146586 None:intergenic 20.0%
!! CTTAGTTTATTTGTACTATT+AGG + chr7_4:64146760-64146779 Msa1170730:intron 20.0%
!!! TTTTGATAACTTCATTATTC+TGG + chr7_4:64147163-64147182 Msa1170730:intron 20.0%
!! TAAATATTTCAATCTTTCCT+CGG - chr7_4:64147714-64147733 None:intergenic 20.0%
!!! ATTTTCTCATGCTTAATTTT+GGG - chr7_4:64147787-64147806 None:intergenic 20.0%
!!! TATTTTCTCATGCTTAATTT+TGG - chr7_4:64147788-64147807 None:intergenic 20.0%
!! ATTTAATTCTATAAGGAAGA+GGG - chr7_4:64147886-64147905 None:intergenic 20.0%
!! AATTTAATTCTATAAGGAAG+AGG - chr7_4:64147887-64147906 None:intergenic 20.0%
!! GTGCATAATTTAATTCTATA+AGG - chr7_4:64147893-64147912 None:intergenic 20.0%
!!! GCATATTAGTTTCTTAATAT+GGG - chr7_4:64148234-64148253 None:intergenic 20.0%
!!! AGCATATTAGTTTCTTAATA+TGG - chr7_4:64148235-64148254 None:intergenic 20.0%
!!! ATTCAATCCTATTTTACATA+TGG + chr7_4:64148344-64148363 Msa1170730:intron 20.0%
!! ATCTTTCATAAATAAATGCA+AGG - chr7_4:64148404-64148423 None:intergenic 20.0%
!!! ACAAAATGCTTTTAGATAAA+TGG + chr7_4:64148659-64148678 Msa1170730:intron 20.0%
!!! GAATTTGCTTTGAATTAATT+GGG - chr7_4:64148877-64148896 None:intergenic 20.0%
!!! TGAATTTGCTTTGAATTAAT+TGG - chr7_4:64148878-64148897 None:intergenic 20.0%
!! GGATTAATGCTTATAAAATA+TGG - chr7_4:64148981-64149000 None:intergenic 20.0%
!! AAGACAATATAACAATACAA+TGG - chr7_4:64149613-64149632 None:intergenic 20.0%
!! TATTGTCTTAAACATTCTTA+TGG + chr7_4:64149624-64149643 Msa1170730:CDS 20.0%
!!! CTTTTTTTCCTTTGTTTTTT+TGG + chr7_4:64149698-64149717 Msa1170730:intron 20.0%
!! AAAATGCATAAATATAGAAC+AGG - chr7_4:64150121-64150140 None:intergenic 20.0%
!! AATGTCTAAATTATCATAGT+AGG - chr7_4:64150155-64150174 None:intergenic 20.0%
!! ATTTCATAATTAGCACATTT+GGG + chr7_4:64150646-64150665 Msa1170730:intron 20.0%
!!! ATTCATCTTTTAGAAAACTT+TGG - chr7_4:64151360-64151379 None:intergenic 20.0%
!!! GAAAAAATGAAGTGTTTTAA+AGG - chr7_4:64151715-64151734 None:intergenic 20.0%
!!! TTAAAACACTTCATTTTTTC+AGG + chr7_4:64151715-64151734 Msa1170730:intron 20.0%
!!! TAGTTCTGAATAATTTTCAA+AGG - chr7_4:64151942-64151961 None:intergenic 20.0%
!! AAGAGAATAAAGTAAAATCA+TGG + chr7_4:64152360-64152379 Msa1170730:intron 20.0%
!! TAAAAAGAAAATTACCTGAA+TGG - chr7_4:64152857-64152876 None:intergenic 20.0%
!! GTGGAAATATAAATAATTCT+TGG + chr7_4:64153050-64153069 Msa1170730:intron 20.0%
!! GAAATATAAATAATTCTTGG+TGG + chr7_4:64153053-64153072 Msa1170730:intron 20.0%
!! TATTGTTATAACACTTACTA+CGG + chr7_4:64154313-64154332 Msa1170730:three_prime_UTR 20.0%
! ATTAGGGATTTAGTTGAAAT+GGG - chr7_4:64146144-64146163 None:intergenic 25.0%
! AATTAGGGATTTAGTTGAAA+TGG - chr7_4:64146145-64146164 None:intergenic 25.0%
! TTTCAAATTACGTTTGTAAG+TGG - chr7_4:64146988-64147007 None:intergenic 25.0%
! TAAATCAACATACTGTTTCA+AGG - chr7_4:64147643-64147662 None:intergenic 25.0%
!!! ATGTTGATTTAAGATACATG+TGG + chr7_4:64147652-64147671 Msa1170730:intron 25.0%
! TATTTACCTACTATTGCTAT+AGG - chr7_4:64147685-64147704 None:intergenic 25.0%
! TATAGCAATAGTAGGTAAAT+AGG + chr7_4:64147684-64147703 Msa1170730:intron 25.0%
! ATAGCAATAGTAGGTAAATA+GGG + chr7_4:64147685-64147704 Msa1170730:intron 25.0%
!! TTTTCTCATGCTTAATTTTG+GGG - chr7_4:64147786-64147805 None:intergenic 25.0%
! GAATTAAATTATGCACCTTA+TGG + chr7_4:64147897-64147916 Msa1170730:intron 25.0%
! TGTAAAATAGGATTGAATAG+CGG - chr7_4:64148342-64148361 None:intergenic 25.0%
! GATTACACCATATGTAAAAT+AGG - chr7_4:64148354-64148373 None:intergenic 25.0%
! AAAAGGAGAGGAAAAATAAA+TGG - chr7_4:64148427-64148446 None:intergenic 25.0%
!!! TCCTTTTTGAGATAATAAGA+TGG + chr7_4:64148440-64148459 Msa1170730:intron 25.0%
! ACCATCTTATTATCTCAAAA+AGG - chr7_4:64148444-64148463 None:intergenic 25.0%
!!! TTGATACTGTTTTTCTTTTC+AGG + chr7_4:64149040-64149059 Msa1170730:intron 25.0%
! CATCATTGTTATCTGATTAT+AGG + chr7_4:64149489-64149508 Msa1170730:intron 25.0%
!! TATGCCATTTGAAAGTAAAT+TGG + chr7_4:64149572-64149591 Msa1170730:CDS 25.0%
! GAATCCAATTTACTTTCAAA+TGG - chr7_4:64149579-64149598 None:intergenic 25.0%
! AAAAAATATTCTGCTACACA+AGG - chr7_4:64149785-64149804 None:intergenic 25.0%
! CATACAATTCACTTTAATCT+GGG - chr7_4:64149929-64149948 None:intergenic 25.0%
! TCATACAATTCACTTTAATC+TGG - chr7_4:64149930-64149949 None:intergenic 25.0%
! ATTACTAGTTAAATGTACAC+TGG - chr7_4:64150022-64150041 None:intergenic 25.0%
! TGTACATTTAACTAGTAATG+TGG + chr7_4:64150023-64150042 Msa1170730:CDS 25.0%
! AGAAAATATGCATGAACATT+TGG - chr7_4:64150307-64150326 None:intergenic 25.0%
! GATTTCATAATTAGCACATT+TGG + chr7_4:64150645-64150664 Msa1170730:intron 25.0%
! TTTCATAATTAGCACATTTG+GGG + chr7_4:64150647-64150666 Msa1170730:intron 25.0%
! GCTCAAAATAATATAGTAGT+AGG + chr7_4:64150832-64150851 Msa1170730:intron 25.0%
! ATTATCTTATACCAAGAGTT+AGG + chr7_4:64150891-64150910 Msa1170730:intron 25.0%
! TTGTTACAATTGCTTCAAAA+TGG - chr7_4:64151111-64151130 None:intergenic 25.0%
! GTATATTGAAACATTGAACA+AGG - chr7_4:64151290-64151309 None:intergenic 25.0%
! AAGCCTTAATATGCATAAAA+AGG + chr7_4:64151873-64151892 Msa1170730:CDS 25.0%
!! GTACCTTTTTATGCATATTA+AGG - chr7_4:64151879-64151898 None:intergenic 25.0%
!! TGAATAATTTTCAAAGGTGA+GGG - chr7_4:64151936-64151955 None:intergenic 25.0%
! ACTATTGAATAGTTTCCAAT+TGG + chr7_4:64151961-64151980 Msa1170730:intron 25.0%
! CTATTGAATAGTTTCCAATT+GGG + chr7_4:64151962-64151981 Msa1170730:intron 25.0%
! TATTGAATAGTTTCCAATTG+GGG + chr7_4:64151963-64151982 Msa1170730:intron 25.0%
! AGCTGATAGTAAATATTAGA+TGG + chr7_4:64152024-64152043 Msa1170730:intron 25.0%
! AAATTTGCATGCATACAATA+AGG + chr7_4:64152175-64152194 Msa1170730:CDS 25.0%
! AACATATGAAAACTGTACTT+AGG - chr7_4:64152243-64152262 None:intergenic 25.0%
!! TACAGTTTTCATATGTTTGT+TGG + chr7_4:64152246-64152265 Msa1170730:intron 25.0%
!! GTTTGTTGGACTATTTATAT+TGG + chr7_4:64152260-64152279 Msa1170730:intron 25.0%
! TGTCCTATTAATTGTGAATT+AGG + chr7_4:64152303-64152322 Msa1170730:intron 25.0%
! AGTCCTAATTCACAATTAAT+AGG - chr7_4:64152309-64152328 None:intergenic 25.0%
!! TAACTTTCATTTTCTTGTCA+TGG + chr7_4:64152745-64152764 Msa1170730:intron 25.0%
!!! AGTTTCCAAGTAACTTTTTT+CGG + chr7_4:64153025-64153044 Msa1170730:intron 25.0%
! ATTACTTTAACCATCATTCT+TGG - chr7_4:64153654-64153673 None:intergenic 25.0%
! TAAGCAATAACTATATCATC+AGG - chr7_4:64153719-64153738 None:intergenic 25.0%
! ATTTCTAAATTTCTCTCCTA+AGG - chr7_4:64153877-64153896 None:intergenic 25.0%
! GTCTTTGAATTGATATATTC+AGG + chr7_4:64154089-64154108 Msa1170730:intron 25.0%
AGAAACTCAAACAAGCAATT+AGG + chr7_4:64146024-64146043 Msa1170730:CDS 30.0%
GAAACTCAAACAAGCAATTA+GGG + chr7_4:64146025-64146044 Msa1170730:CDS 30.0%
!! GGCTTTAGATTATTATACTC+AGG + chr7_4:64146316-64146335 Msa1170730:CDS 30.0%
TGAAATATAGGCATTACGAA+AGG + chr7_4:64146431-64146450 Msa1170730:intron 30.0%
TCAATTTCACCAACTTCAAA+AGG - chr7_4:64146459-64146478 None:intergenic 30.0%
AGTGATTATGAATGTGGTTA+AGG - chr7_4:64146561-64146580 None:intergenic 30.0%
CACACATACACATGAATAAA+TGG - chr7_4:64146622-64146641 None:intergenic 30.0%
TACTACTATATTTGTGCTCT+TGG - chr7_4:64147340-64147359 None:intergenic 30.0%
!! GTGTTTCACTTTTGAATTCT+GGG + chr7_4:64147518-64147537 Msa1170730:intron 30.0%
GATTGTGGACATATATCTTA+TGG - chr7_4:64147581-64147600 None:intergenic 30.0%
GCATGATTAAGAAATGATTG+TGG - chr7_4:64147596-64147615 None:intergenic 30.0%
!!! TGAAGTACATTTCTGGTTTT+TGG - chr7_4:64147618-64147637 None:intergenic 30.0%
CTAGAAGATGAATGAAACTA+AGG + chr7_4:64147825-64147844 Msa1170730:intron 30.0%
TAAGCCACATGTTTAAACAA+AGG - chr7_4:64147989-64148008 None:intergenic 30.0%
!! GACTTTTTGAAGGCTTTTTA+GGG - chr7_4:64148040-64148059 None:intergenic 30.0%
!! TGACTTTTTGAAGGCTTTTT+AGG - chr7_4:64148041-64148060 None:intergenic 30.0%
GGAATGAGAAGAATAAAGTA+AGG - chr7_4:64148083-64148102 None:intergenic 30.0%
TACTTTATTCTTCTCATTCC+TGG + chr7_4:64148083-64148102 Msa1170730:intron 30.0%
TTTGATGTGAATTAGTACTG+AGG - chr7_4:64148197-64148216 None:intergenic 30.0%
ACCATAGTATAGAATGCATA+CGG - chr7_4:64148376-64148395 None:intergenic 30.0%
CTTATTATCTCAAAAAGGAG+AGG - chr7_4:64148439-64148458 None:intergenic 30.0%
! TTGTTTCTTACCATAGCATA+TGG - chr7_4:64148592-64148611 None:intergenic 30.0%
! TTTTACAATCTCGCAAGTTT+AGG + chr7_4:64148698-64148717 Msa1170730:intron 30.0%
TTTACAATCTCGCAAGTTTA+GGG + chr7_4:64148699-64148718 Msa1170730:intron 30.0%
!!! TTCAGCATTTTTTTATTGCC+TGG + chr7_4:64148775-64148794 Msa1170730:intron 30.0%
ACTATTAAGTACAGTTCCAA+GGG - chr7_4:64148834-64148853 None:intergenic 30.0%
AACTATTAAGTACAGTTCCA+AGG - chr7_4:64148835-64148854 None:intergenic 30.0%
! CTACAAGAGTTTGCTTATAT+TGG + chr7_4:64148917-64148936 Msa1170730:intron 30.0%
AAGAACGTAATTATCTTCTG+TGG - chr7_4:64149213-64149232 None:intergenic 30.0%
AATGATTGTGAGCAAAAGAT+TGG + chr7_4:64149284-64149303 Msa1170730:CDS 30.0%
GAACATAAACATGAATGTCA+AGG + chr7_4:64149317-64149336 Msa1170730:CDS 30.0%
! TTTTTGTCAAAGAACTCATC+TGG + chr7_4:64149401-64149420 Msa1170730:CDS 30.0%
GTTATCTGATTATAGGTATC+TGG + chr7_4:64149496-64149515 Msa1170730:intron 30.0%
TGATATAGAGATTCCATTGA+TGG - chr7_4:64149661-64149680 None:intergenic 30.0%
!!! TTCCTTTGTTTTTTTGGGTA+TGG + chr7_4:64149704-64149723 Msa1170730:intron 30.0%
ATCCATACCCAAAAAAACAA+AGG - chr7_4:64149709-64149728 None:intergenic 30.0%
TGACAAAACAAGATGAAACT+TGG - chr7_4:64149884-64149903 None:intergenic 30.0%
!!! TCATCTTGTTTTGTCAATAC+AGG + chr7_4:64149888-64149907 Msa1170730:intron 30.0%
TTAAAATCAATAGACGCTCA+TGG + chr7_4:64149961-64149980 Msa1170730:CDS 30.0%
AAATGTACACTGGAATGAAA+TGG - chr7_4:64150012-64150031 None:intergenic 30.0%
TTTAACTAGTAATGTGGAAC+AGG + chr7_4:64150029-64150048 Msa1170730:CDS 30.0%
CTGCACATATACTTATCAAT+TGG + chr7_4:64150063-64150082 Msa1170730:intron 30.0%
AATTTAGACATTATTGGCGA+TGG + chr7_4:64150163-64150182 Msa1170730:intron 30.0%
!!! GCGATGGCAATTTTTTTTTT+GGG + chr7_4:64150179-64150198 Msa1170730:intron 30.0%
! CTAGGAGATATAATGGAATA+TGG - chr7_4:64150227-64150246 None:intergenic 30.0%
CATATTCCATTATATCTCCT+AGG + chr7_4:64150225-64150244 Msa1170730:intron 30.0%
GGCAAAGCTATTTATAAAGT+TGG + chr7_4:64150256-64150275 Msa1170730:CDS 30.0%
AATATGCATGAACATTTGGT+TGG - chr7_4:64150303-64150322 None:intergenic 30.0%
CTTTATCAGATCAAGCTTTA+GGG - chr7_4:64150526-64150545 None:intergenic 30.0%
TCTTTATCAGATCAAGCTTT+AGG - chr7_4:64150527-64150546 None:intergenic 30.0%
! ATTTCAACAGAAATTTTGCC+AGG - chr7_4:64150622-64150641 None:intergenic 30.0%
GTCAAGAAACCAATTTCAAA+AGG + chr7_4:64150720-64150739 Msa1170730:intron 30.0%
!!! CACTCTTAACCTTTTGAAAT+TGG - chr7_4:64150732-64150751 None:intergenic 30.0%
AAAGGTTAAGAGTGAAAAGA+AGG + chr7_4:64150738-64150757 Msa1170730:intron 30.0%
! AGTTTTCCTATGGCTAATAA+TGG + chr7_4:64150771-64150790 Msa1170730:intron 30.0%
! TTTCCTCTAATTTTATGTGG+GGG - chr7_4:64151009-64151028 None:intergenic 30.0%
! CTTTCCTCTAATTTTATGTG+GGG - chr7_4:64151010-64151029 None:intergenic 30.0%
! CCTTTCCTCTAATTTTATGT+GGG - chr7_4:64151011-64151030 None:intergenic 30.0%
! TCCTTTCCTCTAATTTTATG+TGG - chr7_4:64151012-64151031 None:intergenic 30.0%
AATGGTTATATGCCAAGATT+GGG - chr7_4:64151093-64151112 None:intergenic 30.0%
AAATGGTTATATGCCAAGAT+TGG - chr7_4:64151094-64151113 None:intergenic 30.0%
! CAACTTTTTGTTGAGCTTTT+AGG + chr7_4:64151128-64151147 Msa1170730:intron 30.0%
!! TTGAGCTTTTAGGAAGTTAT+AGG + chr7_4:64151138-64151157 Msa1170730:intron 30.0%
AATTGTATTTCCACGACATA+TGG + chr7_4:64151161-64151180 Msa1170730:intron 30.0%
TTATGTTGAGTGGAAATGAT+CGG - chr7_4:64151190-64151209 None:intergenic 30.0%
! TGATAAAGTAAGCTACTTTG+AGG + chr7_4:64151537-64151556 Msa1170730:intron 30.0%
! GATAAAGTAAGCTACTTTGA+GGG + chr7_4:64151538-64151557 Msa1170730:intron 30.0%
! ACATATGTTGCTTAGCATTT+AGG + chr7_4:64151644-64151663 Msa1170730:intron 30.0%
GGAGAAAATAGTTCAAACAT+AGG - chr7_4:64151693-64151712 None:intergenic 30.0%
! CTGAATAATTTTCAAAGGTG+AGG - chr7_4:64151937-64151956 None:intergenic 30.0%
ATTGAATAGTTTCCAATTGG+GGG + chr7_4:64151964-64151983 Msa1170730:intron 30.0%
ACAGTTTACAGACTGAAATA+TGG + chr7_4:64152062-64152081 Msa1170730:intron 30.0%
ATACAATAAGGTTATTGCAG+AGG + chr7_4:64152187-64152206 Msa1170730:CDS 30.0%
TATGAAAACTGTACTTAGGA+TGG - chr7_4:64152239-64152258 None:intergenic 30.0%
TTCTCCTACAATATCAAACT+TGG + chr7_4:64152407-64152426 Msa1170730:intron 30.0%
GACAAGATTCATGAAATGTT+TGG + chr7_4:64152445-64152464 Msa1170730:intron 30.0%
! AAATCTTTTAACCAAGCTTC+AGG - chr7_4:64152505-64152524 None:intergenic 30.0%
AGTGGGAGAATTACAATTAT+CGG + chr7_4:64152813-64152832 Msa1170730:CDS 30.0%
ACAAACCTACTATCTTAGTT+TGG + chr7_4:64152877-64152896 Msa1170730:intron 30.0%
AAATCATGGTGCATTTACAA+TGG + chr7_4:64153113-64153132 Msa1170730:intron 30.0%
!!! TCATAGGAATGTTTTTAGCT+TGG + chr7_4:64153459-64153478 Msa1170730:intron 30.0%
!!! CATAGGAATGTTTTTAGCTT+GGG + chr7_4:64153460-64153479 Msa1170730:intron 30.0%
! ACAAACAAAAGCTTGCTTAT+GGG - chr7_4:64153565-64153584 None:intergenic 30.0%
! AACAAACAAAAGCTTGCTTA+TGG - chr7_4:64153566-64153585 None:intergenic 30.0%
! GATTGATAACAAGACCATAT+GGG - chr7_4:64153619-64153638 None:intergenic 30.0%
! AGATTGATAACAAGACCATA+TGG - chr7_4:64153620-64153639 None:intergenic 30.0%
!! GCTATTTTCTCACGTTATTA+TGG + chr7_4:64153815-64153834 Msa1170730:CDS 30.0%
TTGGTATGAAAGATCTACAA+TGG + chr7_4:64153990-64154009 Msa1170730:three_prime_UTR 30.0%
TTGTTGTCGATGTAGTTAAA+TGG + chr7_4:64154151-64154170 Msa1170730:intron 30.0%
TGTTGTCGATGTAGTTAAAT+GGG + chr7_4:64154152-64154171 Msa1170730:intron 30.0%
AGTGTGTGACATGTAAATAT+CGG - chr7_4:64154254-64154273 None:intergenic 30.0%
ATATTTACATGTCACACACT+TGG + chr7_4:64154254-64154273 Msa1170730:three_prime_UTR 30.0%
TTATGAAAGAAAAGATGTCC+TGG - chr7_4:64154344-64154363 None:intergenic 30.0%
AAGAGAGGGAAAGAAAACAA+AGG + chr7_4:64145951-64145970 Msa1170730:five_prime_UTR 35.0%
! ATTGCTTGTTTGAGTTTCTC+TGG - chr7_4:64146023-64146042 None:intergenic 35.0%
GATTTAGTTGAAATGGGAGA+AGG - chr7_4:64146138-64146157 None:intergenic 35.0%
! CTCTAATGCTGATTATGTCA+AGG + chr7_4:64146295-64146314 Msa1170730:CDS 35.0%
! AAGATTCATTTTCTGCAGCA+GGG - chr7_4:64146649-64146668 None:intergenic 35.0%
! AAAGATTCATTTTCTGCAGC+AGG - chr7_4:64146650-64146669 None:intergenic 35.0%
GATATGTCCAAGCTATTCAA+AGG + chr7_4:64146707-64146726 Msa1170730:CDS 35.0%
AAACACACCTTTGAATAGCT+TGG - chr7_4:64146717-64146736 None:intergenic 35.0%
TCGACAGAAACTTGATCATT+CGG - chr7_4:64147044-64147063 None:intergenic 35.0%
GCATTGAAGTTTGATGTAGT+TGG + chr7_4:64147090-64147109 Msa1170730:intron 35.0%
AACTTCATTATTCTGGCATC+AGG + chr7_4:64147170-64147189 Msa1170730:intron 35.0%
AGGAAAGGCAAATATTGCAT+TGG + chr7_4:64147206-64147225 Msa1170730:CDS 35.0%
GGAAAGGCAAATATTGCATT+GGG + chr7_4:64147207-64147226 Msa1170730:CDS 35.0%
CTATATTTGTGCTCTTGGAT+TGG - chr7_4:64147335-64147354 None:intergenic 35.0%
!! AATTTGCTAGCTGCTTAACA+AGG - chr7_4:64147412-64147431 None:intergenic 35.0%
TTGTTAAGCAGCTAGCAAAT+TGG + chr7_4:64147411-64147430 Msa1170730:intron 35.0%
!! AAATTGGTTAAGGCTTGTTG+AGG + chr7_4:64147427-64147446 Msa1170730:intron 35.0%
!! CGTGTTTCACTTTTGAATTC+TGG + chr7_4:64147517-64147536 Msa1170730:intron 35.0%
TTGAATTCTGGGTGATTCTT+TGG + chr7_4:64147529-64147548 Msa1170730:intron 35.0%
TGAATTCTGGGTGATTCTTT+GGG + chr7_4:64147530-64147549 Msa1170730:intron 35.0%
CAAGGATTGAAGTACATTTC+TGG - chr7_4:64147625-64147644 None:intergenic 35.0%
!! AAAGGTATCCAAGACTGAAT+AGG - chr7_4:64147759-64147778 None:intergenic 35.0%
!! GCTTAATTTTGGGGAACTAA+AGG - chr7_4:64147777-64147796 None:intergenic 35.0%
AATTATGCACCTTATGGACT+AGG + chr7_4:64147903-64147922 Msa1170730:intron 35.0%
! ATTATGCACCTTATGGACTA+GGG + chr7_4:64147904-64147923 Msa1170730:intron 35.0%
ACATGTTTAAACAAAGGCAG+GGG - chr7_4:64147983-64148002 None:intergenic 35.0%
CACATGTTTAAACAAAGGCA+GGG - chr7_4:64147984-64148003 None:intergenic 35.0%
!! TTTTGAAGGCTTTTTAGGGA+TGG - chr7_4:64148036-64148055 None:intergenic 35.0%
! GTATGCAAGTGACTTTTTGA+AGG - chr7_4:64148050-64148069 None:intergenic 35.0%
TGCTAGAAAACTTCAATCAG+AGG + chr7_4:64148251-64148270 Msa1170730:intron 35.0%
TCCGTATGCATTCTATACTA+TGG + chr7_4:64148372-64148391 Msa1170730:intron 35.0%
!! ACACTTTGCAGCTTTATTTG+AGG - chr7_4:64148493-64148512 None:intergenic 35.0%
! GCTTCAATTGAAAGTACAAG+AGG + chr7_4:64148730-64148749 Msa1170730:intron 35.0%
TGGCGATTATGTAAGCAAAT+AGG + chr7_4:64148937-64148956 Msa1170730:intron 35.0%
ACAGTCTTCTTGAGATGAAT+GGG + chr7_4:64149001-64149020 Msa1170730:intron 35.0%
! GGTATTGAACACGATATACA+AGG - chr7_4:64149134-64149153 None:intergenic 35.0%
GCATATTCAGCAAGATTGTT+GGG - chr7_4:64149245-64149264 None:intergenic 35.0%
AGCATATTCAGCAAGATTGT+TGG - chr7_4:64149246-64149265 None:intergenic 35.0%
! TGGAGATATCACAAGTTTTG+TGG + chr7_4:64149421-64149440 Msa1170730:CDS 35.0%
!! CACAAGTTTTGTGGAAAAGT+TGG + chr7_4:64149430-64149449 Msa1170730:CDS 35.0%
! AGCTTTTATTCTTACTGTGC+AGG + chr7_4:64149527-64149546 Msa1170730:intron 35.0%
CAATGGAATCTCTATATCAC+AGG + chr7_4:64149662-64149681 Msa1170730:CDS 35.0%
! CTCTATATCACAGGTTGTTT+TGG + chr7_4:64149671-64149690 Msa1170730:intron 35.0%
!!! TCTTGTTTTGTCAATACAGG+TGG + chr7_4:64149891-64149910 Msa1170730:intron 35.0%
!!! GGCGATGGCAATTTTTTTTT+TGG + chr7_4:64150178-64150197 Msa1170730:intron 35.0%
!! GTCCACAGGTAACTTATTTT+TGG + chr7_4:64150395-64150414 Msa1170730:intron 35.0%
CTCCAAAAATAAGTTACCTG+TGG - chr7_4:64150400-64150419 None:intergenic 35.0%
GGTTCATATTCTTGACAACA+TGG + chr7_4:64150676-64150695 Msa1170730:intron 35.0%
! ATCATGAGTGAGTTTTCCTA+TGG + chr7_4:64150761-64150780 Msa1170730:intron 35.0%
TCAATGCCATTATTAGCCAT+AGG - chr7_4:64150780-64150799 None:intergenic 35.0%
TATGGCTAATAATGGCATTG+AGG + chr7_4:64150779-64150798 Msa1170730:intron 35.0%
! ATGGCTAATAATGGCATTGA+GGG + chr7_4:64150780-64150799 Msa1170730:intron 35.0%
!! AATCTTCTATTAGTGGGCTT+GGG - chr7_4:64150946-64150965 None:intergenic 35.0%
! GAAGACTACATTTTCTCTAC+GGG - chr7_4:64150987-64151006 None:intergenic 35.0%
! GGAAGACTACATTTTCTCTA+CGG - chr7_4:64150988-64151007 None:intergenic 35.0%
CCCACATAAAATTAGAGGAA+AGG + chr7_4:64151008-64151027 Msa1170730:intron 35.0%
ATGGTTATATGCCAAGATTG+GGG - chr7_4:64151092-64151111 None:intergenic 35.0%
! CAGATAAAGTTCTGTTTTGC+AGG + chr7_4:64151309-64151328 Msa1170730:intron 35.0%
! TAAAGTTCTGTTTTGCAGGT+TGG + chr7_4:64151313-64151332 Msa1170730:intron 35.0%
! AAAGTTCTGTTTTGCAGGTT+GGG + chr7_4:64151314-64151333 Msa1170730:intron 35.0%
GCATTTCATTGTCAATGTAC+TGG + chr7_4:64151382-64151401 Msa1170730:CDS 35.0%
!! TCACACAATGAAAAGCATTG+AGG - chr7_4:64151438-64151457 None:intergenic 35.0%
TTACTTTATCAGCAACAGCT+AGG - chr7_4:64151528-64151547 None:intergenic 35.0%
ATATGTAGAGTTGAGTGACT+TGG + chr7_4:64151606-64151625 Msa1170730:intron 35.0%
TTGCTTAGCATTTAGGAGTT+GGG + chr7_4:64151651-64151670 Msa1170730:intron 35.0%
!!! TATGAACAGAAGCGTCATTT+TGG - chr7_4:64151784-64151803 None:intergenic 35.0%
AAGGTACACACTGTTCAATT+TGG + chr7_4:64151892-64151911 Msa1170730:intron 35.0%
TGAGGGAAAAGCTGTTATTA+GGG - chr7_4:64151919-64151938 None:intergenic 35.0%
TATTTACTATCAGCTCATGC+AGG - chr7_4:64152019-64152038 None:intergenic 35.0%
GACTGAAATATGGAAATGAC+AGG + chr7_4:64152072-64152091 Msa1170730:intron 35.0%
CATGCCAAGTTTGATATTGT+AGG - chr7_4:64152414-64152433 None:intergenic 35.0%
CTACTTACACTATCAAGTCT+TGG - chr7_4:64152626-64152645 None:intergenic 35.0%
TCCCACTAAACAAAAAGCTT+GGG - chr7_4:64152800-64152819 None:intergenic 35.0%
! TCATTGTAAAGCATCCATTC+AGG + chr7_4:64152840-64152859 Msa1170730:CDS 35.0%
GGAAGTAGAAGTTTGGTTAT+TGG + chr7_4:64152955-64152974 Msa1170730:intron 35.0%
GTATCTCTTTCTGAATAGCT+AGG + chr7_4:64152995-64153014 Msa1170730:intron 35.0%
! TTTTCATTTCCCTCTCCATA+TGG - chr7_4:64153259-64153278 None:intergenic 35.0%
TGGAGAGGGAAATGAAAAAA+TGG + chr7_4:64153261-64153280 Msa1170730:intron 35.0%
CTAATGAACACATAAACCTG+TGG - chr7_4:64153333-64153352 None:intergenic 35.0%
CACAGGTTTATGTGTTCATT+AGG + chr7_4:64153331-64153350 Msa1170730:intron 35.0%
AGGTTTATGTGTTCATTAGG+AGG + chr7_4:64153334-64153353 Msa1170730:intron 35.0%
AAAGACCTCTCATTTCTCAA+TGG - chr7_4:64153404-64153423 None:intergenic 35.0%
TTTAATGCACATAGCCATAC+AGG + chr7_4:64153422-64153441 Msa1170730:intron 35.0%
! AATTAAGTCTTGTAGAGCCA+TGG + chr7_4:64153534-64153553 Msa1170730:intron 35.0%
ATCAGACTTTCCAAGAATGA+TGG + chr7_4:64153641-64153660 Msa1170730:intron 35.0%
!!! CTTTTTTCCGTTGCAGATTT+TGG + chr7_4:64153679-64153698 Msa1170730:intron 35.0%
ATCTTCTCCAAAATCTGCAA+CGG - chr7_4:64153689-64153708 None:intergenic 35.0%
TATTGTCACCCAAGTAAAGT+TGG - chr7_4:64153766-64153785 None:intergenic 35.0%
TTCCTTATCTTCAGTACCTT+AGG + chr7_4:64153858-64153877 Msa1170730:CDS 35.0%
!! TTGCTGGAAAAGCATTTGAT+TGG - chr7_4:64153915-64153934 None:intergenic 35.0%
! AAATGCTTTTCCAGCAAAGT+GGG + chr7_4:64153918-64153937 Msa1170730:three_prime_UTR 35.0%
TCAATCACAGCTTAAATGAC+AGG + chr7_4:64153963-64153982 Msa1170730:three_prime_UTR 35.0%
AGCTTAAATGACAGGTCATT+TGG + chr7_4:64153971-64153990 Msa1170730:three_prime_UTR 35.0%
! CGAGTAATTTTTCTTGAGGT+TGG - chr7_4:64154017-64154036 None:intergenic 35.0%
! GCATCGAGTAATTTTTCTTG+AGG - chr7_4:64154021-64154040 None:intergenic 35.0%
ATAACGTAGTCTCGTGAATA+TGG + chr7_4:64154360-64154379 Msa1170730:three_prime_UTR 35.0%
TAACGTAGTCTCGTGAATAT+GGG + chr7_4:64154361-64154380 Msa1170730:three_prime_UTR 35.0%
GCAAAGGAAGAAGAAAGAGA+GGG + chr7_4:64145937-64145956 Msa1170730:five_prime_UTR 40.0%
GGGAAAGAAAACAAAGGAAG+TGG + chr7_4:64145957-64145976 Msa1170730:five_prime_UTR 40.0%
AAACAAAGGAAGTGGTGTAG+AGG + chr7_4:64145965-64145984 Msa1170730:five_prime_UTR 40.0%
TGGTGTAGAGGAAGAAGATA+TGG + chr7_4:64145977-64145996 Msa1170730:exon 40.0%
GAAGATATGGAGACTCTGAA+AGG + chr7_4:64145990-64146009 Msa1170730:exon 40.0%
TAGTACGTACCTGGTGAAAA+GGG - chr7_4:64146115-64146134 None:intergenic 40.0%
GCGTTGAAATATAAGCAGCT+TGG + chr7_4:64146260-64146279 Msa1170730:CDS 40.0%
! TTCTGTCGAGAGACAGATTT+TGG + chr7_4:64147055-64147074 Msa1170730:intron 40.0%
! TCTGTCGAGAGACAGATTTT+GGG + chr7_4:64147056-64147075 Msa1170730:intron 40.0%
!! AAGAGTGTCGAATCATCAAC+AGG + chr7_4:64147267-64147286 Msa1170730:CDS 40.0%
AGCAGCTAGCAAATTGGTTA+AGG + chr7_4:64147417-64147436 Msa1170730:intron 40.0%
GATGAGCCTATAGCAATAGT+AGG + chr7_4:64147676-64147695 Msa1170730:intron 40.0%
!!! GGTGTTTTGGCTGAATTTCT+TGG - chr7_4:64147865-64147884 None:intergenic 40.0%
!!! CTATAAGGAAGAGGGTGTTT+TGG - chr7_4:64147878-64147897 None:intergenic 40.0%
CATGTTTAAACAAAGGCAGG+GGG - chr7_4:64147982-64148001 None:intergenic 40.0%
CCACATGTTTAAACAAAGGC+AGG - chr7_4:64147985-64148004 None:intergenic 40.0%
! CCTGCCTTTGTTTAAACATG+TGG + chr7_4:64147982-64148001 Msa1170730:intron 40.0%
AGTCACTTGCATACATCAAG+AGG + chr7_4:64148056-64148075 Msa1170730:intron 40.0%
GTTTGCACACATTTCATTCC+AGG - chr7_4:64148104-64148123 None:intergenic 40.0%
GATTGTATGCTAGACGAGTT+AGG + chr7_4:64148130-64148149 Msa1170730:intron 40.0%
!! AGTTCTGAGAGAATGGAGAA+GGG - chr7_4:64148171-64148190 None:intergenic 40.0%
!! AAGTTCTGAGAGAATGGAGA+AGG - chr7_4:64148172-64148191 None:intergenic 40.0%
!! GAGGTAAAGTTCTGAGAGAA+TGG - chr7_4:64148178-64148197 None:intergenic 40.0%
CAAACAAAATGTGACCAACG+AGG - chr7_4:64148313-64148332 None:intergenic 40.0%
ATAGGATTGAATAGCGGTCA+GGG - chr7_4:64148336-64148355 None:intergenic 40.0%
AATAGGATTGAATAGCGGTC+AGG - chr7_4:64148337-64148356 None:intergenic 40.0%
TGCTGAAGAACCATATGCTA+TGG + chr7_4:64148579-64148598 Msa1170730:CDS 40.0%
! AGTTCTCTGGAAAGAAAACC+AGG - chr7_4:64148796-64148815 None:intergenic 40.0%
! TGGTTTTCTTTCCAGAGAAC+TGG + chr7_4:64148795-64148814 Msa1170730:intron 40.0%
ATTAAGTACAGTTCCAAGGG+AGG - chr7_4:64148831-64148850 None:intergenic 40.0%
CATTCATCTCAAGAAGACTG+TGG - chr7_4:64149002-64149021 None:intergenic 40.0%
CACAGTCTTCTTGAGATGAA+TGG + chr7_4:64149000-64149019 Msa1170730:intron 40.0%
GTAGGTCGTTCAAGCAATAA+TGG - chr7_4:64149097-64149116 None:intergenic 40.0%
ATACAAGGAACTCTATCAGC+AGG - chr7_4:64149119-64149138 None:intergenic 40.0%
AATGCCAAATAAAGGCAGGT+GGG + chr7_4:64149171-64149190 Msa1170730:CDS 40.0%
! ATGAATGTCAAGGAGTGCAT+TGG + chr7_4:64149327-64149346 Msa1170730:CDS 40.0%
! ACTGCCTTCTGACATAGTTT+TGG + chr7_4:64149358-64149377 Msa1170730:CDS 40.0%
CTGCTACACAAGGTTTATGA+TGG - chr7_4:64149775-64149794 None:intergenic 40.0%
AATATGGCTCAGAATCACGA+AGG - chr7_4:64150211-64150230 None:intergenic 40.0%
CTCTGACCTAGGAGATATAA+TGG - chr7_4:64150234-64150253 None:intergenic 40.0%
TTATATCTCCTAGGTCAGAG+TGG + chr7_4:64150234-64150253 Msa1170730:intron 40.0%
TATATCTCCTAGGTCAGAGT+GGG + chr7_4:64150235-64150254 Msa1170730:intron 40.0%
GAACATTTGGTTGGCAAGAA+TGG - chr7_4:64150294-64150313 None:intergenic 40.0%
TGTCAGCTGGAATTGTCTTA+CGG + chr7_4:64150373-64150392 Msa1170730:CDS 40.0%
! CTTTAGGGATGCTTGATTAC+TGG - chr7_4:64150511-64150530 None:intergenic 40.0%
GCCTATATAAAAGAGTGACC+TGG + chr7_4:64150601-64150620 Msa1170730:intron 40.0%
! GCCAGGTCACTCTTTTATAT+AGG - chr7_4:64150605-64150624 None:intergenic 40.0%
TCTTGACAACATGGCTGAAA+AGG + chr7_4:64150685-64150704 Msa1170730:intron 40.0%
! TGGCTAATAATGGCATTGAG+GGG + chr7_4:64150781-64150800 Msa1170730:intron 40.0%
!!! AGGGGTATTTTTGCTACGAT+AGG + chr7_4:64150799-64150818 Msa1170730:intron 40.0%
CTTATACCAAGAGTTAGGTC+AGG + chr7_4:64150896-64150915 Msa1170730:intron 40.0%
ACAATACCTGACCTAACTCT+TGG - chr7_4:64150905-64150924 None:intergenic 40.0%
!! CAATCTTCTATTAGTGGGCT+TGG - chr7_4:64150947-64150966 None:intergenic 40.0%
CGCAGCAATCTTCTATTAGT+GGG - chr7_4:64150952-64150971 None:intergenic 40.0%
TCGCAGCAATCTTCTATTAG+TGG - chr7_4:64150953-64150972 None:intergenic 40.0%
CTTCCCCCACATAAAATTAG+AGG + chr7_4:64151003-64151022 Msa1170730:intron 40.0%
TGTGTGAACCCAAATTGTTC+TGG + chr7_4:64151451-64151470 Msa1170730:CDS 40.0%
GTTGCTTAGCATTTAGGAGT+TGG + chr7_4:64151650-64151669 Msa1170730:intron 40.0%
TGCATTTCAAACAGACTCCA+GGG - chr7_4:64151811-64151830 None:intergenic 40.0%
GTGAGGGAAAAGCTGTTATT+AGG - chr7_4:64151920-64151939 None:intergenic 40.0%
! AGATCTCAAAGCGTCTGAAA+TGG - chr7_4:64152138-64152157 None:intergenic 40.0%
! AGGATGGAGAACTTTTGTGA+AGG - chr7_4:64152223-64152242 None:intergenic 40.0%
!! AAAAGCATTCTCCTGAAGCT+TGG + chr7_4:64152491-64152510 Msa1170730:intron 40.0%
ATCCAAACACAGTCAGAGAT+AGG + chr7_4:64152545-64152564 Msa1170730:intron 40.0%
ATCCTATCTCTGACTGTGTT+TGG - chr7_4:64152550-64152569 None:intergenic 40.0%
TTTGTGCGACCTCAATTGAA+AGG + chr7_4:64152673-64152692 Msa1170730:intron 40.0%
CTAAACAAAAAGCTTGGGCA+AGG - chr7_4:64152795-64152814 None:intergenic 40.0%
!! TGCCCAAGCTTTTTGTTTAG+TGG + chr7_4:64152795-64152814 Msa1170730:CDS 40.0%
!! GCCCAAGCTTTTTGTTTAGT+GGG + chr7_4:64152796-64152815 Msa1170730:CDS 40.0%
CTCCCACTAAACAAAAAGCT+TGG - chr7_4:64152801-64152820 None:intergenic 40.0%
GGGAGAATTACAATTATCGG+CGG + chr7_4:64152816-64152835 Msa1170730:CDS 40.0%
! ACCTACTATCTTAGTTTGGC+TGG + chr7_4:64152881-64152900 Msa1170730:intron 40.0%
ACCAGCCAAACTAAGATAGT+AGG - chr7_4:64152885-64152904 None:intergenic 40.0%
CACTGCCGAAAAAAGTTACT+TGG - chr7_4:64153033-64153052 None:intergenic 40.0%
!!! CAAGTAACTTTTTTCGGCAG+TGG + chr7_4:64153031-64153050 Msa1170730:intron 40.0%
TAGCGTTACACTGGAAATCA+TGG + chr7_4:64153099-64153118 Msa1170730:intron 40.0%
TCACGCTAATTCTCATAGCA+AGG - chr7_4:64153142-64153161 None:intergenic 40.0%
ACCAAGTGCATGTAACCATA+TGG + chr7_4:64153164-64153183 Msa1170730:intron 40.0%
TCCATATGGTTACATGCACT+TGG - chr7_4:64153168-64153187 None:intergenic 40.0%
TGCATGTAACCATATGGAGA+GGG + chr7_4:64153170-64153189 Msa1170730:intron 40.0%
ATTCTCATTGCACTTCTCAG+CGG - chr7_4:64153211-64153230 None:intergenic 40.0%
! AAATGGCTAGTTGCTGCATT+TGG + chr7_4:64153278-64153297 Msa1170730:intron 40.0%
! AATGGCTAGTTGCTGCATTT+GGG + chr7_4:64153279-64153298 Msa1170730:intron 40.0%
AGGAGCTATTATATACGTCC+TGG + chr7_4:64153354-64153373 Msa1170730:intron 40.0%
GGAGCTATTATATACGTCCT+GGG + chr7_4:64153355-64153374 Msa1170730:intron 40.0%
AAGTCACTCAAATTCTACCC+AGG - chr7_4:64153375-64153394 None:intergenic 40.0%
GGTAGAATTTGAGTGACTTG+TGG + chr7_4:64153376-64153395 Msa1170730:intron 40.0%
TAAAATGCTCACGACCTGTA+TGG - chr7_4:64153439-64153458 None:intergenic 40.0%
! GGTCGTGAGCATTTTATCAT+AGG + chr7_4:64153443-64153462 Msa1170730:intron 40.0%
GAGTGAATGCATTTCCCATA+TGG + chr7_4:64153602-64153621 Msa1170730:intron 40.0%
TTCATCCGTCCAACTTTACT+TGG + chr7_4:64153754-64153773 Msa1170730:CDS 40.0%
TCATCCGTCCAACTTTACTT+GGG + chr7_4:64153755-64153774 Msa1170730:CDS 40.0%
AATAGTGCTGTCAACAGCAT+TGG + chr7_4:64153782-64153801 Msa1170730:CDS 40.0%
TTATGGACTTCATGCAGACT+TGG + chr7_4:64153832-64153851 Msa1170730:CDS 40.0%
!! CTCCTAAGGTACTGAAGATA+AGG - chr7_4:64153863-64153882 None:intergenic 40.0%
!! GGAAAAGCATTTGATTGGAG+AGG - chr7_4:64153910-64153929 None:intergenic 40.0%
! CAAATGCTTTTCCAGCAAAG+TGG + chr7_4:64153917-64153936 Msa1170730:three_prime_UTR 40.0%
AGATTGTCTCAAGATCAGTC+TGG + chr7_4:64154191-64154210 Msa1170730:three_prime_UTR 40.0%
ATCAGTCTGGATGGAATTTG+AGG + chr7_4:64154204-64154223 Msa1170730:three_prime_UTR 40.0%
GAAAGAAAAGATGTCCTGGT+TGG - chr7_4:64154340-64154359 None:intergenic 40.0%
GGCAAAGGAAGAAGAAAGAG+AGG + chr7_4:64145936-64145955 Msa1170730:five_prime_UTR 45.0%
! TCATTTCGACCCTTTTCACC+AGG + chr7_4:64146103-64146122 Msa1170730:CDS 45.0%
GTAGTACGTACCTGGTGAAA+AGG - chr7_4:64146116-64146135 None:intergenic 45.0%
!!! CGAAAGGCTCCTTTTGAAGT+TGG + chr7_4:64146447-64146466 Msa1170730:CDS 45.0%
TTCTTTGCCTAATTGCCACG+TGG + chr7_4:64146941-64146960 Msa1170730:intron 45.0%
TCTTTGCCTAATTGCCACGT+GGG + chr7_4:64146942-64146961 Msa1170730:intron 45.0%
AACTTTCCCACGTGGCAATT+AGG - chr7_4:64146951-64146970 None:intergenic 45.0%
TGCCACGTGGGAAAGTTTAT+TGG + chr7_4:64146954-64146973 Msa1170730:intron 45.0%
GCCACGTGGGAAAGTTTATT+GGG + chr7_4:64146955-64146974 Msa1170730:intron 45.0%
CCACGTGGGAAAGTTTATTG+GGG + chr7_4:64146956-64146975 Msa1170730:intron 45.0%
! CTGTCGAGAGACAGATTTTG+GGG + chr7_4:64147057-64147076 Msa1170730:intron 45.0%
CATTATTCTGGCATCAGGCA+TGG + chr7_4:64147175-64147194 Msa1170730:intron 45.0%
! AGTGTCGAATCATCAACAGG+AGG + chr7_4:64147270-64147289 Msa1170730:CDS 45.0%
GTGTCGAATCATCAACAGGA+GGG + chr7_4:64147271-64147290 Msa1170730:CDS 45.0%
GGAGAACAGCTTGAGTACTA+CGG + chr7_4:64147374-64147393 Msa1170730:CDS 45.0%
GAGAACAGCTTGAGTACTAC+GGG + chr7_4:64147375-64147394 Msa1170730:CDS 45.0%
GTAGGTAAATAGGGTTTCCG+AGG + chr7_4:64147694-64147713 Msa1170730:intron 45.0%
!! TTATGTCGGCTTAGAGCTTG+AGG + chr7_4:64147731-64147750 Msa1170730:intron 45.0%
! TTGAGGTGCCTATTCAGTCT+TGG + chr7_4:64147748-64147767 Msa1170730:intron 45.0%
GTTGTTCTCCCTAGTCCATA+AGG - chr7_4:64147915-64147934 None:intergenic 45.0%
! GGGAGAACAACTCACTGTTT+TGG + chr7_4:64147924-64147943 Msa1170730:intron 45.0%
AGAAACAATCGTTGCCTCGT+TGG + chr7_4:64148296-64148315 Msa1170730:intron 45.0%
AAGATGGTACAGTGCGTTTG+TGG + chr7_4:64148456-64148475 Msa1170730:intron 45.0%
AGTGTCTCCGTACCTGATAA+AGG + chr7_4:64148508-64148527 Msa1170730:CDS 45.0%
TCCGTACCTGATAAAGGAAG+AGG + chr7_4:64148514-64148533 Msa1170730:CDS 45.0%
GCCTCTTCCTTTATCAGGTA+CGG - chr7_4:64148518-64148537 None:intergenic 45.0%
ACCTGATAAAGGAAGAGGCA+TGG + chr7_4:64148519-64148538 Msa1170730:CDS 45.0%
ACCATGCCTCTTCCTTTATC+AGG - chr7_4:64148523-64148542 None:intergenic 45.0%
GAACCTGGTGAAACATCAGA+TGG - chr7_4:64148550-64148569 None:intergenic 45.0%
TGATGTTTCACCAGGTTCGT+TGG + chr7_4:64148552-64148571 Msa1170730:CDS 45.0%
AAGGAACTCTATCAGCAGGT+AGG - chr7_4:64149115-64149134 None:intergenic 45.0%
CTCGCACCAATGCCAAATAA+AGG + chr7_4:64149163-64149182 Msa1170730:CDS 45.0%
CACCAATGCCAAATAAAGGC+AGG + chr7_4:64149167-64149186 Msa1170730:CDS 45.0%
! CACCTGCCTTTATTTGGCAT+TGG - chr7_4:64149172-64149191 None:intergenic 45.0%
CAATGCCAAATAAAGGCAGG+TGG + chr7_4:64149170-64149189 Msa1170730:CDS 45.0%
TTTGCCCACCTGCCTTTATT+TGG - chr7_4:64149178-64149197 None:intergenic 45.0%
CCAGCCAAAACTATGTCAGA+AGG - chr7_4:64149365-64149384 None:intergenic 45.0%
!!! CCTTCTGACATAGTTTTGGC+TGG + chr7_4:64149362-64149381 Msa1170730:CDS 45.0%
! TTAGCACATTTGGGGTTGCA+TGG + chr7_4:64150655-64150674 Msa1170730:intron 45.0%
TGCTACGATAGGCAAACATG+AGG + chr7_4:64150810-64150829 Msa1170730:intron 45.0%
!! AGTAGCATTGACCCCAATCT+TGG + chr7_4:64151078-64151097 Msa1170730:intron 45.0%
TGATCGGAAACCATATGTCG+TGG - chr7_4:64151174-64151193 None:intergenic 45.0%
!! TGTTTTGCAGGTTGGGTTGT+GGG + chr7_4:64151321-64151340 Msa1170730:intron 45.0%
ACACTGCGCCAGAACAATTT+GGG - chr7_4:64151462-64151481 None:intergenic 45.0%
AACACTGCGCCAGAACAATT+TGG - chr7_4:64151463-64151482 None:intergenic 45.0%
AAATTGTTCTGGCGCAGTGT+TGG + chr7_4:64151462-64151481 Msa1170730:CDS 45.0%
GAGTTGGGAGCTTGGATATA+TGG + chr7_4:64151666-64151685 Msa1170730:intron 45.0%
GCTTCTGTTCATATTCACCC+TGG + chr7_4:64151791-64151810 Msa1170730:CDS 45.0%
CTGCATTTCAAACAGACTCC+AGG - chr7_4:64151812-64151831 None:intergenic 45.0%
ATGCAGTTCTTACCGTGATC+TGG + chr7_4:64151826-64151845 Msa1170730:CDS 45.0%
TTATCTAGCTAGCCCCCAAT+TGG - chr7_4:64151979-64151998 None:intergenic 45.0%
! GCTCATGCAGGATTGATAAC+TGG - chr7_4:64152007-64152026 None:intergenic 45.0%
ATATGGAAATGACAGGCTGC+AGG + chr7_4:64152079-64152098 Msa1170730:intron 45.0%
! ATCTCCTCCTCCTTTTCTCT+CGG + chr7_4:64152646-64152665 Msa1170730:intron 45.0%
AAACACACCGAGAGAAAAGG+AGG - chr7_4:64152656-64152675 None:intergenic 45.0%
CACAAACACACCGAGAGAAA+AGG - chr7_4:64152659-64152678 None:intergenic 45.0%
CAGTCCATGCCTTTCAATTG+AGG - chr7_4:64152685-64152704 None:intergenic 45.0%
TGGACTGTGTTCGACAAACA+AGG + chr7_4:64152698-64152717 Msa1170730:intron 45.0%
AAAGCGGGGAAGTAGAAGTT+TGG + chr7_4:64152948-64152967 Msa1170730:intron 45.0%
CTTGGTGGAACTCACGAAAT+TGG + chr7_4:64153068-64153087 Msa1170730:intron 45.0%
GATTTCCAGTGTAACGCTAC+AGG - chr7_4:64153098-64153117 None:intergenic 45.0%
GTGCATGTAACCATATGGAG+AGG + chr7_4:64153169-64153188 Msa1170730:intron 45.0%
AGGTCATTTCCCTCTCCATA+TGG - chr7_4:64153182-64153201 None:intergenic 45.0%
ATGGAGAGGGAAATGACCTA+TGG + chr7_4:64153183-64153202 Msa1170730:intron 45.0%
! AGTTGCTGCATTTGGGATAG+AGG + chr7_4:64153286-64153305 Msa1170730:intron 45.0%
! GTTGCTGCATTTGGGATAGA+GGG + chr7_4:64153287-64153306 Msa1170730:intron 45.0%
! TTGCTGCATTTGGGATAGAG+GGG + chr7_4:64153288-64153307 Msa1170730:intron 45.0%
!! TGGTGCCATTGAGAAATGAG+AGG + chr7_4:64153396-64153415 Msa1170730:intron 45.0%
GTCACCCAAGTAAAGTTGGA+CGG - chr7_4:64153762-64153781 None:intergenic 45.0%
!! GTCAACAGCATTGGTCGAAT+AGG + chr7_4:64153791-64153810 Msa1170730:CDS 45.0%
CACTTTATAGCCCACTTTGC+TGG - chr7_4:64153931-64153950 None:intergenic 45.0%
! AAGAAACACTGACTGCTGAG+CGG - chr7_4:64154053-64154072 None:intergenic 45.0%
TGTCTCAAGATCAGTCTGGA+TGG + chr7_4:64154195-64154214 Msa1170730:three_prime_UTR 45.0%
! AGGCTTTGCTGTAGTCAGAA+GGG + chr7_4:64154224-64154243 Msa1170730:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAAAAAAAG+CGG + chr7_4:64152932-64152951 Msa1170730:intron 5.0%
CCCCAATAAACTTTCCCACG+TGG - chr7_4:64146959-64146978 None:intergenic 50.0%
TCTGGCATCAGGCATGGTAT+AGG + chr7_4:64147181-64147200 Msa1170730:intron 50.0%
CATCAGGCATGGTATAGGAG+AGG + chr7_4:64147186-64147205 Msa1170730:intron 50.0%
GGCATGGTATAGGAGAGGAA+AGG + chr7_4:64147191-64147210 Msa1170730:intron 50.0%
AAGCTGTTCTCCTTCTGTCG+CGG - chr7_4:64147366-64147385 None:intergenic 50.0%
CCTGGTGAAACATCAGATGG+CGG - chr7_4:64148547-64148566 None:intergenic 50.0%
TCAGCATGAACCAACGAACC+TGG - chr7_4:64148565-64148584 None:intergenic 50.0%
CATTGGTGCGAGCAGTACAA+TGG - chr7_4:64149155-64149174 None:intergenic 50.0%
ATGTCAGAAGGCAGTACAGC+AGG - chr7_4:64149353-64149372 None:intergenic 50.0%
GGAGCTATGCTTGCCATCAA+TGG + chr7_4:64149645-64149664 Msa1170730:CDS 50.0%
! CATGGACTGTCAGATCAGTC+TGG + chr7_4:64149979-64149998 Msa1170730:CDS 50.0%
GGAATTGTCTTACGGTCCAC+AGG + chr7_4:64150381-64150400 Msa1170730:CDS 50.0%
!! CTGTTTTGCAGGTTGGGTTG+TGG + chr7_4:64151320-64151339 Msa1170730:intron 50.0%
GCATTTAGGAGTTGGGAGCT+TGG + chr7_4:64151658-64151677 Msa1170730:intron 50.0%
CACGTGAAGACTCCAGATCA+CGG - chr7_4:64151841-64151860 None:intergenic 50.0%
GCGACCTCAATTGAAAGGCA+TGG + chr7_4:64152678-64152697 Msa1170730:intron 50.0%
TTGTCATGGTCTGCTGTTGC+AGG + chr7_4:64152759-64152778 Msa1170730:intron 50.0%
TCCAGTGTAACGCTACAGGT+AGG - chr7_4:64153094-64153113 None:intergenic 50.0%
ACCAACTGCACGTAGCCATA+TGG + chr7_4:64153241-64153260 Msa1170730:intron 50.0%
TCCATATGGCTACGTGCAGT+TGG - chr7_4:64153245-64153264 None:intergenic 50.0%
TGCACGTAGCCATATGGAGA+GGG + chr7_4:64153247-64153266 Msa1170730:intron 50.0%
CTTGCTTATGGGTGCATCCA+TGG - chr7_4:64153554-64153573 None:intergenic 50.0%
! GAGGCTTTGCTGTAGTCAGA+AGG + chr7_4:64154223-64154242 Msa1170730:three_prime_UTR 50.0%
! GGCTTTGCTGTAGTCAGAAG+GGG + chr7_4:64154225-64154244 Msa1170730:three_prime_UTR 50.0%
! GCTTTGCTGTAGTCAGAAGG+GGG + chr7_4:64154226-64154245 Msa1170730:three_prime_UTR 50.0%
! TGTCACACACTTGGTTCTCG+AGG + chr7_4:64154263-64154282 Msa1170730:three_prime_UTR 50.0%
ACACTTACTACGGTCCAACC+AGG + chr7_4:64154323-64154342 Msa1170730:three_prime_UTR 50.0%
GGGAGAAGGTAGTACGTACC+TGG - chr7_4:64146124-64146143 None:intergenic 55.0%
GACCCTAGCTATGCTCTGTG+CGG + chr7_4:64146221-64146240 Msa1170730:CDS 55.0%
ACCCTAGCTATGCTCTGTGC+GGG + chr7_4:64146222-64146241 Msa1170730:CDS 55.0%
TCCCGCACAGAGCATAGCTA+GGG - chr7_4:64146226-64146245 None:intergenic 55.0%
TTCCCGCACAGAGCATAGCT+AGG - chr7_4:64146227-64146246 None:intergenic 55.0%
AGTAGTACAGCCGCGACAGA+AGG + chr7_4:64147353-64147372 Msa1170730:CDS 55.0%
AAAGGCAGGGGGCTTTCAAG+GGG - chr7_4:64147971-64147990 None:intergenic 55.0%
CAAAGGCAGGGGGCTTTCAA+GGG - chr7_4:64147972-64147991 None:intergenic 55.0%
ACAAAGGCAGGGGGCTTTCA+AGG - chr7_4:64147973-64147992 None:intergenic 55.0%
TGGTACAGTGCGTTTGTGGC+AGG + chr7_4:64148460-64148479 Msa1170730:intron 55.0%
CCGCCATCTGATGTTTCACC+AGG + chr7_4:64148544-64148563 Msa1170730:CDS 55.0%
GTCAGGAGTCTCCAGTTCTC+TGG - chr7_4:64148809-64148828 None:intergenic 55.0%
GTACAGTTCCAAGGGAGGTC+AGG - chr7_4:64148826-64148845 None:intergenic 55.0%
GGACTGTCAGATCAGTCTGG+AGG + chr7_4:64149982-64150001 Msa1170730:CDS 55.0%
AGCTTTGCCCACTCTGACCT+AGG - chr7_4:64150245-64150264 None:intergenic 55.0%
ACAACACAAGCCGTAGCAGC+TGG + chr7_4:64150349-64150368 Msa1170730:CDS 55.0%
CAACACAAGCCGTAGCAGCT+GGG + chr7_4:64150350-64150369 Msa1170730:CDS 55.0%
GCACAAAGCGCATCTGTGCA+AGG - chr7_4:64150576-64150595 None:intergenic 55.0%
CACACCGAGAGAAAAGGAGG+AGG - chr7_4:64152653-64152672 None:intergenic 55.0%
GCCTACCTGTAGCGTTACAC+TGG + chr7_4:64153090-64153109 Msa1170730:intron 55.0%
CTGCACGTAGCCATATGGAG+AGG + chr7_4:64153246-64153265 Msa1170730:intron 55.0%
! GAGGGGAAGCGTGATCTAGT+AGG + chr7_4:64153305-64153324 Msa1170730:intron 55.0%
CGTGATCTAGTAGGCTCCAC+AGG + chr7_4:64153314-64153333 Msa1170730:intron 55.0%
TGGAGACTCCTGACCTCCCT+TGG + chr7_4:64148815-64148834 Msa1170730:intron 60.0%
CAGCTGACACCCAGCTGCTA+CGG - chr7_4:64150362-64150381 None:intergenic 60.0%
GCACTTCTCAGCGGCACCAT+AGG - chr7_4:64153202-64153221 None:intergenic 60.0%
! ACACTGACTGCTGAGCGGCT+TGG - chr7_4:64154048-64154067 None:intergenic 60.0%
CGTAGCAGCTGGGTGTCAGC+TGG + chr7_4:64150360-64150379 Msa1170730:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 64145926 64154391 64145926 ID=Msa1170730;Name=Msa1170730
chr7_4 mRNA 64145926 64154391 64145926 ID=Msa1170730-mRNA-1;Parent=Msa1170730;Name=Msa1170730-mRNA-1;_AED=0.12;_eAED=0.12;_QI=70|1|1|1|0.93|0.87|16|393|777
chr7_4 exon 64145926 64146124 64145926 ID=Msa1170730-mRNA-1:exon:20558;Parent=Msa1170730-mRNA-1
chr7_4 exon 64146203 64146337 64146203 ID=Msa1170730-mRNA-1:exon:20559;Parent=Msa1170730-mRNA-1
chr7_4 exon 64146441 64146527 64146441 ID=Msa1170730-mRNA-1:exon:20560;Parent=Msa1170730-mRNA-1
chr7_4 exon 64146657 64146728 64146657 ID=Msa1170730-mRNA-1:exon:20561;Parent=Msa1170730-mRNA-1
chr7_4 exon 64147192 64147396 64147192 ID=Msa1170730-mRNA-1:exon:20562;Parent=Msa1170730-mRNA-1
chr7_4 exon 64148482 64148600 64148482 ID=Msa1170730-mRNA-1:exon:20563;Parent=Msa1170730-mRNA-1
chr7_4 exon 64149062 64149451 64149062 ID=Msa1170730-mRNA-1:exon:20564;Parent=Msa1170730-mRNA-1
chr7_4 exon 64149549 64149683 64149549 ID=Msa1170730-mRNA-1:exon:20565;Parent=Msa1170730-mRNA-1
chr7_4 exon 64149910 64150050 64149910 ID=Msa1170730-mRNA-1:exon:20566;Parent=Msa1170730-mRNA-1
chr7_4 exon 64150247 64150402 64150247 ID=Msa1170730-mRNA-1:exon:20567;Parent=Msa1170730-mRNA-1
chr7_4 exon 64151331 64151543 64151331 ID=Msa1170730-mRNA-1:exon:20568;Parent=Msa1170730-mRNA-1
chr7_4 exon 64151737 64151894 64151737 ID=Msa1170730-mRNA-1:exon:20569;Parent=Msa1170730-mRNA-1
chr7_4 exon 64152094 64152208 64152094 ID=Msa1170730-mRNA-1:exon:20570;Parent=Msa1170730-mRNA-1
chr7_4 exon 64152781 64152861 64152781 ID=Msa1170730-mRNA-1:exon:20571;Parent=Msa1170730-mRNA-1
chr7_4 exon 64153695 64154059 64153695 ID=Msa1170730-mRNA-1:exon:20572;Parent=Msa1170730-mRNA-1
chr7_4 exon 64154166 64154391 64154166 ID=Msa1170730-mRNA-1:exon:20573;Parent=Msa1170730-mRNA-1
chr7_4 five_prime_UTR 64145926 64145995 64145926 ID=Msa1170730-mRNA-1:five_prime_utr;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64145996 64146124 64145996 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64146203 64146337 64146203 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64146441 64146527 64146441 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64146657 64146728 64146657 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64147192 64147396 64147192 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64148482 64148600 64148482 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64149062 64149451 64149062 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64149549 64149683 64149549 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64149910 64150050 64149910 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64150247 64150402 64150247 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64151331 64151543 64151331 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64151737 64151894 64151737 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64152094 64152208 64152094 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64152781 64152861 64152781 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 CDS 64153695 64153892 64153695 ID=Msa1170730-mRNA-1:cds;Parent=Msa1170730-mRNA-1
chr7_4 three_prime_UTR 64153893 64154059 64153893 ID=Msa1170730-mRNA-1:three_prime_utr;Parent=Msa1170730-mRNA-1
chr7_4 three_prime_UTR 64154166 64154391 64154166 ID=Msa1170730-mRNA-1:three_prime_utr;Parent=Msa1170730-mRNA-1
Gene Sequence

>Msa1170730

ATGGAGACTCTGAAAGGTGCGATTCCAGAGAAACTCAAACAAGCAATTAGGGATAGCACTGTAAACACTCTTAGCGACACATGTTCTTCTCTTCATAACTTCTTTCTTCATTTCGACCCTTTTCACCAGACTATGACTCAACTTGCAGACCCTAGCTATGCTCTGTGCGGGAAAAGCAAAGAAGCTGCGTTGAAATATAAGCAGCTTGGTAATCAATGCTTCTCTAATGCTGATTATGTCAAGGCTTTAGATTATTATACTCAGGCATTACGAAAGGCTCCTTTTGAAGTTGGTGAAATTGAAAATAATCTCATTGCAACTTTGTATATCAATCGAGCTACTGTATTGCATAAAATGAATCTTTCAGTAGAATGTTTGCGCGACTGTGATCGAGCTCTTCAGATATGTCCAAGCTATTCAAAGGCATGGTATAGGAGAGGAAAGGCAAATATTGCATTGGGAAATAATAGAGATGCAATCTGTGACTTAAATATAGCTAAGAGTGTCGAATCATCAACAGGAGGGAAGCGACAAATAGAATGTGAGCTGAAAATTATTTTAGACCAATCCAAGAGCACAAATATAGTAGTACAGCCGCGACAGAAGGAGAACAGCTTGAGTACTACGGGTGAGATGCCTCAAATAAAGCTGCAAAGTGTCTCCGTACCTGATAAAGGAAGAGGCATGGTGCCGCCATCTGATGTTTCACCAGGTTCGTTGGTTCATGCTGAAGAACCATATGCTATGGTAATATTAAAGCAATGTCGTGAAACTCATTGCCATTATTGCTTGAACGACCTACCTGCTGATAGAGTTCCTTGTATATCGTGTTCAATACCATTGTACTGCTCGCACCAATGCCAAATAAAGGCAGGTGGGCAAATGTTCATGATATCCACAGAAGATAATTACGTTCTTAAAAACTTACCCAACAATCTTGCTGAATATGCTGCTGAAGTGATTCAATACAATGATTGTGAGCAAAAGATTGGTAATGTTACTGAACATAAACATGAATGTCAAGGAGTGCATTGGCCTGCTGTACTGCCTTCTGACATAGTTTTGGCTGGCAGACTTCTAGCGAAGTTTTTGTCAAAGAACTCATCTGGAGATATCACAAGTTTTGTGGAAAAGTTGGAGCTTTCTCATTGTTACGAACATATGCCATTTGAAAGTAAATTGGATTCACATTTGTACGCCATTGTATTGTTATATTGTCTTAAACATTCTTATGGAGCTATGCTTGCCATCAATGGAATCTCTATATCACAGGTGGTCATAGTTATTTCCCAGATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCTCATGGACTGTCAGATCAGTCTGGAGGATTTCCATTTCATTCCAGTGTACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGCAAAGCTATTTATAAAGTTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCGCGCACACTCTATTTACGAACAACACAAGCCGTAGCAGCTGGGTGTCAGCTGGAATTGTCTTACGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCAAAGTTTTCTAAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTCAATCTATCTGACATCGTCCTCAATGCTTTTCATTGTGTGAACCCAAATTGTTCTGGCGCAGTGTTGGAAAGCAGAGTACTTGAATGTGAAAAGCAGAAAATCAAACACCTAGCTGTTGCTGATAAAGTTATCAAGAACGATGACATCTATGAAGTTTGTCTTCAATTTAACCAAAATGACGCTTCTGTTCATATTCACCCTGGAGTCTGTTTGAAATGCAGTTCTTACCGTGATCTGGAGTCTTCACGTGCAACAGTTGATAAAGCCTTAATATGCATAAAAAGGCTGCAGGATGCAATACTGTCAAAAGAAATTTCAAATACTTCCATTTCAGACGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAATAAGGTTATTGCAGAGGCAGAAGACAACCTTGCCCAAGCTTTTTGTTTAGTGGGAGAATTACAATTATCGGCGGATCATTGTAAAGCATCCATTCAGATTTTGGAGAAGATATATGATCCTGATGATATAGTTATTGCTTATGAACTTGTGAAGCTTTCATCCGTCCAACTTTACTTGGGTGACAATAGTGCTGTCAACAGCATTGGTCGAATAGGTGCTATTTTCTCACGTTATTATGGACTTCATGCAGACTTGGTCTTTCCTTATCTTCAGTACCTTAGGAGAGAAATTTAG

Protein sequence

>Msa1170730

METLKGAIPEKLKQAIRDSTVNTLSDTCSSLHNFFLHFDPFHQTMTQLADPSYALCGKSKEAALKYKQLGNQCFSNADYVKALDYYTQALRKAPFEVGEIENNLIATLYINRATVLHKMNLSVECLRDCDRALQICPSYSKAWYRRGKANIALGNNRDAICDLNIAKSVESSTGGKRQIECELKIILDQSKSTNIVVQPRQKENSLSTTGEMPQIKLQSVSVPDKGRGMVPPSDVSPGSLVHAEEPYAMVILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQIKAGGQMFMISTEDNYVLKNLPNNLAEYAAEVIQYNDCEQKIGNVTEHKHECQGVHWPAVLPSDIVLAGRLLAKFLSKNSSGDITSFVEKLELSHCYEHMPFESKLDSHLYAIVLLYCLKHSYGAMLAINGISISQVVIVISQIKVNCMTVVRLKSIDAHGLSDQSGGFPFHSSVHLTSNVEQVRVGKAIYKVGSLFNHSCQPNVHAYFLSRTLYLRTTQAVAAGCQLELSYGPQVGLWDCKDRQSFLKDEYAFHCQCTGCSEVNLSDIVLNAFHCVNPNCSGAVLESRVLECEKQKIKHLAVADKVIKNDDIYEVCLQFNQNDASVHIHPGVCLKCSSYRDLESSRATVDKALICIKRLQDAILSKEISNTSISDALRSLHLLRSNLHAYNKVIAEAEDNLAQAFCLVGELQLSADHCKASIQILEKIYDPDDIVIAYELVKLSSVQLYLGDNSAVNSIGRIGAIFSRYYGLHADLVFPYLQYLRREI*