Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441960 | A0A072TQW7 | 99.517 | 207 | 1 | 0 | 1 | 207 | 1 | 207 | 3.67e-147 | 417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa1441960 | 0.831583 | 1.537134e-55 | -8.615850e-47 |
| Msa0019930 | Msa1441960 | 0.813405 | 2.603041e-51 | -8.615850e-47 |
| Msa0029380 | Msa1441960 | 0.804131 | 2.502798e-49 | -8.615850e-47 |
| Msa0048510 | Msa1441960 | 0.822281 | 2.576316e-53 | -8.615850e-47 |
| Msa0065020 | Msa1441960 | 0.838004 | 3.719105e-57 | -8.615850e-47 |
| Msa0068150 | Msa1441960 | 0.801206 | 1.004641e-48 | -8.615850e-47 |
| Msa0077560 | Msa1441960 | 0.877695 | 5.111800e-69 | -8.615850e-47 |
| Msa0081980 | Msa1441960 | 0.804787 | 1.826944e-49 | -8.615850e-47 |
| Msa0082020 | Msa1441960 | 0.802163 | 6.390471e-49 | -8.615850e-47 |
| Msa0094780 | Msa1441960 | 0.801381 | 9.249500e-49 | -8.615850e-47 |
| Msa0110200 | Msa1441960 | 0.821099 | 4.833110e-53 | -8.615850e-47 |
| Msa1364040 | Msa1441960 | 0.801791 | 7.621251e-49 | -8.615850e-47 |
| Msa1366150 | Msa1441960 | 0.843298 | 1.527472e-58 | -8.615850e-47 |
| Msa1368750 | Msa1441960 | 0.845613 | 3.642134e-59 | -8.615850e-47 |
| Msa1374790 | Msa1441960 | 0.839971 | 1.151638e-57 | -8.615850e-47 |
| Msa1384150 | Msa1441960 | 0.823680 | 1.215685e-53 | -8.615850e-47 |
| Msa1387440 | Msa1441960 | 0.857885 | 1.202919e-62 | -8.615850e-47 |
| Msa1391500 | Msa1441960 | 0.807527 | 4.838708e-50 | -8.615850e-47 |
| Msa1397270 | Msa1441960 | 0.819560 | 1.089529e-52 | -8.615850e-47 |
| Msa1398810 | Msa1441960 | 0.832069 | 1.166298e-55 | -8.615850e-47 |
| Msa1429070 | Msa1441960 | 0.846400 | 2.224433e-59 | -8.615850e-47 |
| Msa1441960 | Msa1447100 | 0.806216 | 9.162278e-50 | -8.615850e-47 |
| Msa1441960 | Msa1450190 | 0.815029 | 1.139373e-51 | -8.615850e-47 |
| Msa1441960 | Msa1451820 | 0.843883 | 1.065103e-58 | -8.615850e-47 |
| Msa1441960 | Msa1454010 | 0.823019 | 1.735375e-53 | -8.615850e-47 |
| Msa0607800 | Msa1441960 | 0.830630 | 2.635351e-55 | -8.615850e-47 |
| Msa0621710 | Msa1441960 | 0.818969 | 1.485463e-52 | -8.615850e-47 |
| Msa0624900 | Msa1441960 | 0.804907 | 1.724064e-49 | -8.615850e-47 |
| Msa0625620 | Msa1441960 | 0.809856 | 1.538562e-50 | -8.615850e-47 |
| Msa0641990 | Msa1441960 | 0.813772 | 2.160927e-51 | -8.615850e-47 |
| Msa0648040 | Msa1441960 | 0.818598 | 1.803373e-52 | -8.615850e-47 |
| Msa0658640 | Msa1441960 | 0.806046 | 9.946894e-50 | -8.615850e-47 |
| Msa0662820 | Msa1441960 | 0.800051 | 1.728084e-48 | -8.615850e-47 |
| Msa0666700 | Msa1441960 | 0.818758 | 1.658631e-52 | -8.615850e-47 |
| Msa0690740 | Msa1441960 | 0.813730 | 2.207597e-51 | -8.615850e-47 |
| Msa0693340 | Msa1441960 | -0.800114 | 1.677223e-48 | -8.615850e-47 |
| Msa0702810 | Msa1441960 | 0.817719 | 2.850337e-52 | -8.615850e-47 |
| Msa0703600 | Msa1441960 | 0.809207 | 2.120997e-50 | -8.615850e-47 |
| Msa0703950 | Msa1441960 | 0.809100 | 2.236030e-50 | -8.615850e-47 |
| Msa0709200 | Msa1441960 | 0.811182 | 7.957575e-51 | -8.615850e-47 |
| Msa0709440 | Msa1441960 | 0.848269 | 6.825013e-60 | -8.615850e-47 |
| Msa0709630 | Msa1441960 | 0.804432 | 2.166319e-49 | -8.615850e-47 |
| Msa0714790 | Msa1441960 | 0.800440 | 1.439854e-48 | -8.615850e-47 |
| Msa0735780 | Msa1441960 | 0.817994 | 2.470378e-52 | -8.615850e-47 |
| Msa0754430 | Msa1441960 | 0.850826 | 1.320687e-60 | -8.615850e-47 |
| Msa0754450 | Msa1441960 | 0.854542 | 1.148651e-61 | -8.615850e-47 |
| Msa0758650 | Msa1441960 | 0.805752 | 1.147031e-49 | -8.615850e-47 |
| Msa0773630 | Msa1441960 | 0.811168 | 8.013237e-51 | -8.615850e-47 |
| Msa0780910 | Msa1441960 | 0.816915 | 4.323923e-52 | -8.615850e-47 |
| Msa0815970 | Msa1441960 | 0.824343 | 8.498389e-54 | -8.615850e-47 |
| Msa0818880 | Msa1441960 | 0.811706 | 6.123214e-51 | -8.615850e-47 |
| Msa0821160 | Msa1441960 | 0.823818 | 1.128426e-53 | -8.615850e-47 |
| Msa0828970 | Msa1441960 | 0.821394 | 4.133402e-53 | -8.615850e-47 |
| Msa0122330 | Msa1441960 | 0.815009 | 1.151382e-51 | -8.615850e-47 |
| Msa0123070 | Msa1441960 | 0.823817 | 1.128958e-53 | -8.615850e-47 |
| Msa0125360 | Msa1441960 | 0.807517 | 4.863316e-50 | -8.615850e-47 |
| Msa0142430 | Msa1441960 | 0.809758 | 1.614928e-50 | -8.615850e-47 |
| Msa0143670 | Msa1441960 | 0.838950 | 2.119901e-57 | -8.615850e-47 |
| Msa0169410 | Msa1441960 | 0.806556 | 7.767740e-50 | -8.615850e-47 |
| Msa0172480 | Msa1441960 | 0.820637 | 6.175503e-53 | -8.615850e-47 |
| Msa0172510 | Msa1441960 | 0.804743 | 1.865479e-49 | -8.615850e-47 |
| Msa0185290 | Msa1441960 | 0.817688 | 2.895931e-52 | -8.615850e-47 |
| Msa0190730 | Msa1441960 | 0.821521 | 3.863925e-53 | -8.615850e-47 |
| Msa0194630 | Msa1441960 | 0.802058 | 6.717769e-49 | -8.615850e-47 |
| Msa0204950 | Msa1441960 | 0.818197 | 2.222724e-52 | -8.615850e-47 |
| Msa0213030 | Msa1441960 | 0.812298 | 4.549556e-51 | -8.615850e-47 |
| Msa0225610 | Msa1441960 | 0.816840 | 4.494002e-52 | -8.615850e-47 |
| Msa0233020 | Msa1441960 | 0.806657 | 7.397067e-50 | -8.615850e-47 |
| Msa1226520 | Msa1441960 | 0.800126 | 1.668471e-48 | -8.615850e-47 |
| Msa1244240 | Msa1441960 | 0.850502 | 1.628697e-60 | -8.615850e-47 |
| Msa1254540 | Msa1441960 | 0.824947 | 6.124354e-54 | -8.615850e-47 |
| Msa1257570 | Msa1441960 | 0.813689 | 2.253596e-51 | -8.615850e-47 |
| Msa1300460 | Msa1441960 | 0.806724 | 7.157522e-50 | -8.615850e-47 |
| Msa1332950 | Msa1441960 | 0.802035 | 6.791610e-49 | -8.615850e-47 |
| Msa0367150 | Msa1441960 | 0.819135 | 1.361544e-52 | -8.615850e-47 |
| Msa0373500 | Msa1441960 | 0.853555 | 2.211943e-61 | -8.615850e-47 |
| Msa0380490 | Msa1441960 | 0.830331 | 3.119178e-55 | -8.615850e-47 |
| Msa0383000 | Msa1441960 | 0.809839 | 1.551890e-50 | -8.615850e-47 |
| Msa0409830 | Msa1441960 | 0.847984 | 8.179198e-60 | -8.615850e-47 |
| Msa0414880 | Msa1441960 | 0.833628 | 4.782028e-56 | -8.615850e-47 |
| Msa0430000 | Msa1441960 | 0.826915 | 2.087028e-54 | -8.615850e-47 |
| Msa0432010 | Msa1441960 | 0.847787 | 9.272860e-60 | -8.615850e-47 |
| Msa0440350 | Msa1441960 | 0.817991 | 2.474651e-52 | -8.615850e-47 |
| Msa0454560 | Msa1441960 | 0.808595 | 2.866377e-50 | -8.615850e-47 |
| Msa0459740 | Msa1441960 | 0.833410 | 5.420075e-56 | -8.615850e-47 |
| Msa0468620 | Msa1441960 | 0.831876 | 1.301583e-55 | -8.615850e-47 |
| Msa0481890 | Msa1441960 | 0.848840 | 4.743094e-60 | -8.615850e-47 |
| Msa0980290 | Msa1441960 | 0.801390 | 9.208324e-49 | -8.615850e-47 |
| Msa1042880 | Msa1441960 | 0.814166 | 1.769507e-51 | -8.615850e-47 |
| Msa1072940 | Msa1441960 | 0.804715 | 1.890886e-49 | -8.615850e-47 |
| Msa1084530 | Msa1441960 | 0.848095 | 7.626026e-60 | -8.615850e-47 |
| Msa0249850 | Msa1441960 | 0.807511 | 4.876392e-50 | -8.615850e-47 |
| Msa0266460 | Msa1441960 | 0.816126 | 6.492900e-52 | -8.615850e-47 |
| Msa0269210 | Msa1441960 | 0.860299 | 2.274834e-63 | -8.615850e-47 |
| Msa0281470 | Msa1441960 | 0.815518 | 8.872439e-52 | -8.615850e-47 |
| Msa0288620 | Msa1441960 | 0.806857 | 6.709612e-50 | -8.615850e-47 |
| Msa0313900 | Msa1441960 | 0.802037 | 6.783872e-49 | -8.615850e-47 |
| Msa0320600 | Msa1441960 | 0.822119 | 2.808960e-53 | -8.615850e-47 |
| Msa0354840 | Msa1441960 | 0.806185 | 9.300827e-50 | -8.615850e-47 |
| Msa0361910 | Msa1441960 | 0.831264 | 1.841858e-55 | -8.615850e-47 |
| Msa1114630 | Msa1441960 | 0.812410 | 4.300181e-51 | -8.615850e-47 |
| Msa1125820 | Msa1441960 | 0.843351 | 1.477719e-58 | -8.615850e-47 |
| Msa1125990 | Msa1441960 | 0.842966 | 1.872220e-58 | -8.615850e-47 |
| Msa1132530 | Msa1441960 | 0.803341 | 3.650897e-49 | -8.615850e-47 |
| Msa1159590 | Msa1441960 | 0.805599 | 1.234818e-49 | -8.615850e-47 |
| Msa1171290 | Msa1441960 | 0.849966 | 2.302656e-60 | -8.615850e-47 |
| Msa1192570 | Msa1441960 | 0.802921 | 4.458741e-49 | -8.615850e-47 |
| Msa1201780 | Msa1441960 | 0.825264 | 5.152809e-54 | -8.615850e-47 |
| Msa1207330 | Msa1441960 | 0.808737 | 2.673512e-50 | -8.615850e-47 |
| Msa1218820 | Msa1441960 | 0.835992 | 1.215055e-56 | -8.615850e-47 |
| Msa0500570 | Msa1441960 | 0.831652 | 1.478616e-55 | -8.615850e-47 |
| Msa0500650 | Msa1441960 | 0.833266 | 5.887469e-56 | -8.615850e-47 |
| Msa0502510 | Msa1441960 | 0.851176 | 1.052571e-60 | -8.615850e-47 |
| Msa0514500 | Msa1441960 | 0.831438 | 1.669330e-55 | -8.615850e-47 |
| Msa0520870 | Msa1441960 | 0.811446 | 6.972429e-51 | -8.615850e-47 |
| Msa0531960 | Msa1441960 | 0.830356 | 3.074675e-55 | -8.615850e-47 |
| Msa0534720 | Msa1441960 | 0.800223 | 1.594026e-48 | -8.615850e-47 |
| Msa0567170 | Msa1441960 | 0.806935 | 6.458814e-50 | -8.615850e-47 |
| Msa0580810 | Msa1441960 | 0.838811 | 2.303370e-57 | -8.615850e-47 |
| Msa0588920 | Msa1441960 | 0.808295 | 3.321975e-50 | -8.615850e-47 |
| Msa0863620 | Msa1441960 | 0.830480 | 2.867839e-55 | -8.615850e-47 |
| Msa0865420 | Msa1441960 | 0.816752 | 4.703040e-52 | -8.615850e-47 |
| Msa0878280 | Msa1441960 | 0.846418 | 2.199463e-59 | -8.615850e-47 |
| Msa0900760 | Msa1441960 | 0.804614 | 1.985126e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441960 | MtrunA17_Chr8g0358741 | 99.517 | 207 | 1 | 0 | 1 | 207 | 46 | 252 | 4.35e-150 | 416 |
| Msa1441960 | MtrunA17_Chr3g0103341 | 37.500 | 192 | 113 | 3 | 23 | 207 | 41 | 232 | 5.18e-25 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1441960 | AT3G12870.1 | 72.139 | 201 | 52 | 1 | 10 | 206 | 5 | 205 | 1.73e-99 | 287 |
| Msa1441960 | AT5G56120.1 | 38.000 | 200 | 117 | 3 | 15 | 207 | 36 | 235 | 3.25e-27 | 103 |
Find 51 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCGGATTGAATCTATC+TGG | 0.255908 | tig0029550:+14183 | None:intergenic |
| GTTTGTCTCTTGCTGTCATA+AGG | 0.289653 | tig0029550:-13770 | Msa1441960:CDS |
| CATGATTTGTGACAAGCTTT+AGG | 0.297093 | tig0029550:+14077 | None:intergenic |
| AAGGGTTATCTTGTGTAGTT+AGG | 0.302967 | tig0029550:-13751 | None:intergenic |
| GAGTTTGTGGGTTGGTGTTT+CGG | 0.319413 | tig0029550:+14268 | None:intergenic |
| CTTTGAGCCATTGCTTTAAG+AGG | 0.341158 | tig0029550:+14246 | None:intergenic |
| GGGTTGGTGTTTCGGCAATT+TGG | 0.381774 | tig0029550:+14276 | None:intergenic |
| GAGTTGAAAGTAAAGAAGTT+AGG | 0.394819 | tig0029550:-13842 | Msa1441960:CDS |
| CTAAAGCTTGTCACAAATCA+TGG | 0.398644 | tig0029550:-14076 | Msa1441960:CDS |
| TTTGTCTCTTGCTGTCATAA+GGG | 0.402196 | tig0029550:-13769 | Msa1441960:CDS |
| GAGTGATGTAGAGGCTCATA+TGG | 0.426429 | tig0029550:-13994 | Msa1441960:CDS |
| GGAGCATGAGGGTAGTTGAA+TGG | 0.435925 | tig0029550:+14126 | None:intergenic |
| TAGGGCTTATATGGGCTTTG+AGG | 0.443431 | tig0029550:-14022 | Msa1441960:CDS |
| AAGTTAGGAAATGGTCTTCA+AGG | 0.444925 | tig0029550:-13827 | Msa1441960:CDS |
| GTTGGAGTTTGATTTGTTGA+AGG | 0.447000 | tig0029550:-13898 | Msa1441960:CDS |
| TGAGGGTAGTTGAATGGAAG+AGG | 0.447303 | tig0029550:+14132 | None:intergenic |
| AAAGTAAAGAAGTTAGGAAA+TGG | 0.454954 | tig0029550:-13836 | Msa1441960:CDS |
| TTTGCGGATTGAATCTATCT+GGG | 0.463339 | tig0029550:+14184 | None:intergenic |
| TTGCTTTAAGAGGAGTTTGT+GGG | 0.465955 | tig0029550:+14256 | None:intergenic |
| AGGGTTATCTTGTGTAGTTA+GGG | 0.471643 | tig0029550:-13750 | None:intergenic |
| AAAGCATTGTGATTTCTTTG+CGG | 0.474720 | tig0029550:+14168 | None:intergenic |
| AAGAGTTGAAGAGGAGCATG+AGG | 0.477929 | tig0029550:+14114 | None:intergenic |
| GTGGAGGAATTGAAGAAGAA+AGG | 0.484418 | tig0029550:-13921 | Msa1441960:CDS |
| TCAGTGTTTGTATTAGCCAT+TGG | 0.494026 | tig0029550:+14356 | None:intergenic |
| GATGCTTTCGAGGGAGAAAG+AGG | 0.507945 | tig0029550:-13967 | Msa1441960:CDS |
| ATATGGAGAAGATGCTTTCG+AGG | 0.512619 | tig0029550:-13977 | Msa1441960:CDS |
| CAGTGTAAGATCTTCAATCA+TGG | 0.516363 | tig0029550:-14324 | Msa1441960:CDS |
| AAAGAAGAAGAACTCATCAA+TGG | 0.532094 | tig0029550:-14227 | Msa1441960:CDS |
| GTTTCGGCAATTTGGTGAAG+TGG | 0.538425 | tig0029550:+14284 | None:intergenic |
| GGAATTGAAGAAGAAAGGGT+TGG | 0.541831 | tig0029550:-13916 | Msa1441960:CDS |
| TTTCGGCAATTTGGTGAAGT+GGG | 0.543957 | tig0029550:+14285 | None:intergenic |
| ATTGCTTTAAGAGGAGTTTG+TGG | 0.546009 | tig0029550:+14255 | None:intergenic |
| AGTTAGGAAATGGTCTTCAA+GGG | 0.556873 | tig0029550:-13826 | Msa1441960:CDS |
| AATAACAAAGAACAGAGTGA+TGG | 0.557124 | tig0029550:+14050 | None:intergenic |
| TAAGATCTTCAATCATGGAA+TGG | 0.557240 | tig0029550:-14319 | Msa1441960:CDS |
| AGAGTTGAAGAGGAGCATGA+GGG | 0.559380 | tig0029550:+14115 | None:intergenic |
| AGCTTTAGGTGTTGTATCAG+AGG | 0.559678 | tig0029550:+14091 | None:intergenic |
| AAGAGGATCGCGGATTGTTG+AGG | 0.566520 | tig0029550:-13950 | Msa1441960:CDS |
| AGGAAGTTGATGCTTTGAGA+AGG | 0.575406 | tig0029550:-13878 | Msa1441960:CDS |
| TATCAGAGGAAGAGTTGAAG+AGG | 0.581501 | tig0029550:+14105 | None:intergenic |
| GGAAGTTGATGCTTTGAGAA+GGG | 0.582663 | tig0029550:-13877 | Msa1441960:CDS |
| ATAACAAAGAACAGAGTGAT+GGG | 0.587025 | tig0029550:+14051 | None:intergenic |
| TGGAGGAATTGAAGAAGAAA+GGG | 0.588646 | tig0029550:-13920 | Msa1441960:CDS |
| TTTAAGAGGAGTTTGTGGGT+TGG | 0.603717 | tig0029550:+14260 | None:intergenic |
| GAGGTATAAGAGTGATGTAG+AGG | 0.608995 | tig0029550:-14003 | Msa1441960:CDS |
| TAAAGCTTGTCACAAATCAT+GGG | 0.609433 | tig0029550:-14075 | Msa1441960:CDS |
| ACAAACTCCTCTTAAAGCAA+TGG | 0.614010 | tig0029550:-14253 | Msa1441960:CDS |
| TATGGAGAAGATGCTTTCGA+GGG | 0.614054 | tig0029550:-13976 | Msa1441960:CDS |
| CGGATTGTTGAGGAAATGTG+TGG | 0.678295 | tig0029550:-13940 | Msa1441960:CDS |
| TCGAGGGAGAAAGAGGATCG+CGG | 0.687511 | tig0029550:-13960 | Msa1441960:CDS |
| ATTGTTGAGGAAATGTGTGG+AGG | 0.718156 | tig0029550:-13937 | Msa1441960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTCTTTGTTATTTTCACT+AGG | - | tig0029550:14064-14083 | Msa1441960:CDS | 25.0% |
| !!! | GTTCTTTGTTATTTTCACTA+GGG | - | tig0029550:14065-14084 | Msa1441960:CDS | 25.0% |
| ! | AAAGTAAAGAAGTTAGGAAA+TGG | - | tig0029550:14269-14288 | Msa1441960:CDS | 25.0% |
| TAAGATCTTCAATCATGGAA+TGG | - | tig0029550:13786-13805 | Msa1441960:CDS | 30.0% | |
| AAAGAAGAAGAACTCATCAA+TGG | - | tig0029550:13878-13897 | Msa1441960:CDS | 30.0% | |
| !! | AAAGCATTGTGATTTCTTTG+CGG | + | tig0029550:13940-13959 | None:intergenic | 30.0% |
| TAAAGCTTGTCACAAATCAT+GGG | - | tig0029550:14030-14049 | Msa1441960:CDS | 30.0% | |
| ATAACAAAGAACAGAGTGAT+GGG | + | tig0029550:14057-14076 | None:intergenic | 30.0% | |
| AATAACAAAGAACAGAGTGA+TGG | + | tig0029550:14058-14077 | None:intergenic | 30.0% | |
| ! | TATTTTCACTAGGGCTTATA+TGG | - | tig0029550:14074-14093 | Msa1441960:CDS | 30.0% |
| ! | ATTTTCACTAGGGCTTATAT+GGG | - | tig0029550:14075-14094 | Msa1441960:CDS | 30.0% |
| GAGTTGAAAGTAAAGAAGTT+AGG | - | tig0029550:14263-14282 | Msa1441960:CDS | 30.0% | |
| !! | TTCTCTGTTTTTCTTCTCAA+TGG | - | tig0029550:14309-14328 | Msa1441960:CDS | 30.0% |
| CAGTGTAAGATCTTCAATCA+TGG | - | tig0029550:13781-13800 | Msa1441960:CDS | 35.0% | |
| !! | TTGCTTTAAGAGGAGTTTGT+GGG | + | tig0029550:13852-13871 | None:intergenic | 35.0% |
| !! | ATTGCTTTAAGAGGAGTTTG+TGG | + | tig0029550:13853-13872 | None:intergenic | 35.0% |
| ACAAACTCCTCTTAAAGCAA+TGG | - | tig0029550:13852-13871 | Msa1441960:CDS | 35.0% | |
| ! | TTTGCGGATTGAATCTATCT+GGG | + | tig0029550:13924-13943 | None:intergenic | 35.0% |
| ! | CATGATTTGTGACAAGCTTT+AGG | + | tig0029550:14031-14050 | None:intergenic | 35.0% |
| CTAAAGCTTGTCACAAATCA+TGG | - | tig0029550:14029-14048 | Msa1441960:CDS | 35.0% | |
| TGGAGGAATTGAAGAAGAAA+GGG | - | tig0029550:14185-14204 | Msa1441960:CDS | 35.0% | |
| !! | GTTGGAGTTTGATTTGTTGA+AGG | - | tig0029550:14207-14226 | Msa1441960:CDS | 35.0% |
| AAGTTAGGAAATGGTCTTCA+AGG | - | tig0029550:14278-14297 | Msa1441960:CDS | 35.0% | |
| AGTTAGGAAATGGTCTTCAA+GGG | - | tig0029550:14279-14298 | Msa1441960:CDS | 35.0% | |
| ! | TTTGTCTCTTGCTGTCATAA+GGG | - | tig0029550:14336-14355 | Msa1441960:CDS | 35.0% |
| ! | TTTCGGCAATTTGGTGAAGT+GGG | + | tig0029550:13823-13842 | None:intergenic | 40.0% |
| TTTAAGAGGAGTTTGTGGGT+TGG | + | tig0029550:13848-13867 | None:intergenic | 40.0% | |
| ! | CTTTGAGCCATTGCTTTAAG+AGG | + | tig0029550:13862-13881 | None:intergenic | 40.0% |
| ! | CTTTGCGGATTGAATCTATC+TGG | + | tig0029550:13925-13944 | None:intergenic | 40.0% |
| TATCAGAGGAAGAGTTGAAG+AGG | + | tig0029550:14003-14022 | None:intergenic | 40.0% | |
| !! | AGCTTTAGGTGTTGTATCAG+AGG | + | tig0029550:14017-14036 | None:intergenic | 40.0% |
| GAGGTATAAGAGTGATGTAG+AGG | - | tig0029550:14102-14121 | Msa1441960:CDS | 40.0% | |
| ATATGGAGAAGATGCTTTCG+AGG | - | tig0029550:14128-14147 | Msa1441960:CDS | 40.0% | |
| TATGGAGAAGATGCTTTCGA+GGG | - | tig0029550:14129-14148 | Msa1441960:CDS | 40.0% | |
| ATTGTTGAGGAAATGTGTGG+AGG | - | tig0029550:14168-14187 | Msa1441960:CDS | 40.0% | |
| GTGGAGGAATTGAAGAAGAA+AGG | - | tig0029550:14184-14203 | Msa1441960:CDS | 40.0% | |
| GGAATTGAAGAAGAAAGGGT+TGG | - | tig0029550:14189-14208 | Msa1441960:CDS | 40.0% | |
| !! | AGGAAGTTGATGCTTTGAGA+AGG | - | tig0029550:14227-14246 | Msa1441960:CDS | 40.0% |
| !! | GGAAGTTGATGCTTTGAGAA+GGG | - | tig0029550:14228-14247 | Msa1441960:CDS | 40.0% |
| ! | GTTTGTCTCTTGCTGTCATA+AGG | - | tig0029550:14335-14354 | Msa1441960:CDS | 40.0% |
| ! | GTTTCGGCAATTTGGTGAAG+TGG | + | tig0029550:13824-13843 | None:intergenic | 45.0% |
| !! | GAGTTTGTGGGTTGGTGTTT+CGG | + | tig0029550:13840-13859 | None:intergenic | 45.0% |
| TGAGGGTAGTTGAATGGAAG+AGG | + | tig0029550:13976-13995 | None:intergenic | 45.0% | |
| ! | AGAGTTGAAGAGGAGCATGA+GGG | + | tig0029550:13993-14012 | None:intergenic | 45.0% |
| ! | AAGAGTTGAAGAGGAGCATG+AGG | + | tig0029550:13994-14013 | None:intergenic | 45.0% |
| TAGGGCTTATATGGGCTTTG+AGG | - | tig0029550:14083-14102 | Msa1441960:CDS | 45.0% | |
| GAGTGATGTAGAGGCTCATA+TGG | - | tig0029550:14111-14130 | Msa1441960:CDS | 45.0% | |
| CGGATTGTTGAGGAAATGTG+TGG | - | tig0029550:14165-14184 | Msa1441960:CDS | 45.0% | |
| !! | GGGTTGGTGTTTCGGCAATT+TGG | + | tig0029550:13832-13851 | None:intergenic | 50.0% |
| GGAGCATGAGGGTAGTTGAA+TGG | + | tig0029550:13982-14001 | None:intergenic | 50.0% | |
| GATGCTTTCGAGGGAGAAAG+AGG | - | tig0029550:14138-14157 | Msa1441960:CDS | 50.0% | |
| ! | AAGAGGATCGCGGATTGTTG+AGG | - | tig0029550:14155-14174 | Msa1441960:CDS | 50.0% |
| TCGAGGGAGAAAGAGGATCG+CGG | - | tig0029550:14145-14164 | Msa1441960:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029550 | gene | 13752 | 14375 | 13752 | ID=Msa1441960;Name=Msa1441960 |
| tig0029550 | mRNA | 13752 | 14375 | 13752 | ID=Msa1441960-mRNA-1;Parent=Msa1441960;Name=Msa1441960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|207 |
| tig0029550 | exon | 13752 | 14375 | 13752 | ID=Msa1441960-mRNA-1:exon:13117;Parent=Msa1441960-mRNA-1 |
| tig0029550 | CDS | 13752 | 14375 | 13752 | ID=Msa1441960-mRNA-1:cds;Parent=Msa1441960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
