Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355250 | XP_013460855.1 | 98.844 | 346 | 3 | 1 | 1 | 346 | 1 | 345 | 0.0 | 706 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355250 | sp|Q9LM13|GPMA1_ARATH | 73.089 | 327 | 87 | 1 | 19 | 344 | 1 | 327 | 8.90e-178 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355250 | A0A072UYQ0 | 98.844 | 346 | 3 | 1 | 1 | 346 | 1 | 345 | 0.0 | 706 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011100 | Msa1355250 | -0.805406 | 1.355679e-49 | -8.615850e-47 |
| Msa0013270 | Msa1355250 | 0.815143 | 1.075329e-51 | -8.615850e-47 |
| Msa0015070 | Msa1355250 | 0.809312 | 2.013706e-50 | -8.615850e-47 |
| Msa0016380 | Msa1355250 | -0.805767 | 1.138926e-49 | -8.615850e-47 |
| Msa0017710 | Msa1355250 | 0.836151 | 1.107087e-56 | -8.615850e-47 |
| Msa0025570 | Msa1355250 | 0.829021 | 6.497364e-55 | -8.615850e-47 |
| Msa0027030 | Msa1355250 | -0.822579 | 2.196882e-53 | -8.615850e-47 |
| Msa0033190 | Msa1355250 | -0.807301 | 5.405380e-50 | -8.615850e-47 |
| Msa0037270 | Msa1355250 | -0.830145 | 3.463705e-55 | -8.615850e-47 |
| Msa0038750 | Msa1355250 | -0.826016 | 3.418309e-54 | -8.615850e-47 |
| Msa0040930 | Msa1355250 | 0.800175 | 1.630262e-48 | -8.615850e-47 |
| Msa0042240 | Msa1355250 | -0.851898 | 6.574473e-61 | -8.615850e-47 |
| Msa0044780 | Msa1355250 | -0.807811 | 4.212669e-50 | -8.615850e-47 |
| Msa0046050 | Msa1355250 | -0.806518 | 7.910644e-50 | -8.615850e-47 |
| Msa0047560 | Msa1355250 | -0.819652 | 1.037863e-52 | -8.615850e-47 |
| Msa0060410 | Msa1355250 | 0.800127 | 1.667677e-48 | -8.615850e-47 |
| Msa0061060 | Msa1355250 | -0.815379 | 9.529177e-52 | -8.615850e-47 |
| Msa0064310 | Msa1355250 | -0.814321 | 1.635005e-51 | -8.615850e-47 |
| Msa0065400 | Msa1355250 | -0.825572 | 4.358280e-54 | -8.615850e-47 |
| Msa0065520 | Msa1355250 | -0.842617 | 2.317950e-58 | -8.615850e-47 |
| Msa0072390 | Msa1355250 | -0.814330 | 1.627592e-51 | -8.615850e-47 |
| Msa0073110 | Msa1355250 | 0.824884 | 6.337450e-54 | -8.615850e-47 |
| Msa0074220 | Msa1355250 | -0.801940 | 7.101857e-49 | -8.615850e-47 |
| Msa0078160 | Msa1355250 | -0.808557 | 2.921287e-50 | -8.615850e-47 |
| Msa0078170 | Msa1355250 | -0.810327 | 1.217990e-50 | -8.615850e-47 |
| Msa0079840 | Msa1355250 | -0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa0081120 | Msa1355250 | -0.829350 | 5.407603e-55 | -8.615850e-47 |
| Msa0081290 | Msa1355250 | -0.834122 | 3.597393e-56 | -8.615850e-47 |
| Msa0081790 | Msa1355250 | -0.809637 | 1.714959e-50 | -8.615850e-47 |
| Msa0085690 | Msa1355250 | -0.802382 | 5.760058e-49 | -8.615850e-47 |
| Msa0086620 | Msa1355250 | -0.825048 | 5.797822e-54 | -8.615850e-47 |
| Msa0089470 | Msa1355250 | -0.810382 | 1.184916e-50 | -8.615850e-47 |
| Msa0094900 | Msa1355250 | -0.802183 | 6.330846e-49 | -8.615850e-47 |
| Msa0095890 | Msa1355250 | -0.807020 | 6.198734e-50 | -8.615850e-47 |
| Msa0105590 | Msa1355250 | -0.824600 | 7.394871e-54 | -8.615850e-47 |
| Msa0106540 | Msa1355250 | 0.827225 | 1.759639e-54 | -8.615850e-47 |
| Msa0120320 | Msa1355250 | -0.809248 | 2.078651e-50 | -8.615850e-47 |
| Msa1346340 | Msa1355250 | -0.804209 | 2.411406e-49 | -8.615850e-47 |
| Msa1350580 | Msa1355250 | -0.819866 | 9.272204e-53 | -8.615850e-47 |
| Msa1355250 | Msa1361580 | -0.806895 | 6.586825e-50 | -8.615850e-47 |
| Msa1355250 | Msa1365230 | 0.821552 | 3.800402e-53 | -8.615850e-47 |
| Msa1355250 | Msa1369180 | -0.843488 | 1.358493e-58 | -8.615850e-47 |
| Msa1355250 | Msa1369400 | -0.809089 | 2.248049e-50 | -8.615850e-47 |
| Msa1355250 | Msa1375650 | -0.805690 | 1.182033e-49 | -8.615850e-47 |
| Msa1355250 | Msa1376010 | -0.807420 | 5.097994e-50 | -8.615850e-47 |
| Msa1355250 | Msa1379270 | -0.848918 | 4.512210e-60 | -8.615850e-47 |
| Msa1355250 | Msa1382100 | -0.802285 | 6.031113e-49 | -8.615850e-47 |
| Msa1355250 | Msa1387480 | 0.801796 | 7.601711e-49 | -8.615850e-47 |
| Msa1355250 | Msa1392570 | -0.804170 | 2.456953e-49 | -8.615850e-47 |
| Msa1355250 | Msa1395380 | -0.802351 | 5.846717e-49 | -8.615850e-47 |
| Msa1355250 | Msa1398150 | -0.802638 | 5.101763e-49 | -8.615850e-47 |
| Msa1355250 | Msa1400240 | -0.800216 | 1.599178e-48 | -8.615850e-47 |
| Msa1355250 | Msa1405380 | -0.802505 | 5.434027e-49 | -8.615850e-47 |
| Msa1355250 | Msa1405830 | 0.829105 | 6.200540e-55 | -8.615850e-47 |
| Msa1355250 | Msa1407810 | 0.811745 | 6.003093e-51 | -8.615850e-47 |
| Msa1355250 | Msa1412330 | -0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa1355250 | Msa1412740 | -0.831953 | 1.245944e-55 | -8.615850e-47 |
| Msa1355250 | Msa1412810 | -0.827332 | 1.658507e-54 | -8.615850e-47 |
| Msa1355250 | Msa1413020 | 0.840098 | 1.066900e-57 | -8.615850e-47 |
| Msa1355250 | Msa1418840 | -0.813345 | 2.682307e-51 | -8.615850e-47 |
| Msa1355250 | Msa1422150 | -0.816094 | 6.600338e-52 | -8.615850e-47 |
| Msa1355250 | Msa1429180 | -0.803153 | 3.993037e-49 | -8.615850e-47 |
| Msa1355250 | Msa1432360 | 0.805751 | 1.147784e-49 | -8.615850e-47 |
| Msa1355250 | Msa1434700 | 0.802715 | 4.918588e-49 | -8.615850e-47 |
| Msa1355250 | Msa1436660 | -0.808617 | 2.836666e-50 | -8.615850e-47 |
| Msa1355250 | Msa1437780 | 0.811658 | 6.270167e-51 | -8.615850e-47 |
| Msa1355250 | Msa1438860 | 0.805254 | 1.458597e-49 | -8.615850e-47 |
| Msa1355250 | Msa1441450 | 0.809995 | 1.436482e-50 | -8.615850e-47 |
| Msa1355250 | Msa1450630 | -0.850403 | 1.736941e-60 | -8.615850e-47 |
| Msa1355250 | Msa1451660 | 0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa1355250 | Msa1452560 | -0.810729 | 9.971491e-51 | -8.615850e-47 |
| Msa1355250 | Msa1456620 | -0.811835 | 5.740013e-51 | -8.615850e-47 |
| Msa1355250 | Msa1459680 | -0.804503 | 2.093484e-49 | -8.615850e-47 |
| Msa1355250 | Msa1462610 | 0.807011 | 6.226110e-50 | -8.615850e-47 |
| Msa1355250 | Msa1463590 | 0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa0603180 | Msa1355250 | -0.869569 | 2.805896e-66 | -8.615850e-47 |
| Msa0606120 | Msa1355250 | 0.811471 | 6.887591e-51 | -8.615850e-47 |
| Msa0608780 | Msa1355250 | -0.820535 | 6.516504e-53 | -8.615850e-47 |
| Msa0614020 | Msa1355250 | -0.810243 | 1.270129e-50 | -8.615850e-47 |
| Msa0615070 | Msa1355250 | 0.800068 | 1.714438e-48 | -8.615850e-47 |
| Msa0622450 | Msa1355250 | -0.816681 | 4.878533e-52 | -8.615850e-47 |
| Msa0634900 | Msa1355250 | -0.813833 | 2.094874e-51 | -8.615850e-47 |
| Msa0644220 | Msa1355250 | -0.828468 | 8.840108e-55 | -8.615850e-47 |
| Msa0644630 | Msa1355250 | -0.802289 | 6.021031e-49 | -8.615850e-47 |
| Msa0645390 | Msa1355250 | 0.807528 | 4.837492e-50 | -8.615850e-47 |
| Msa0649250 | Msa1355250 | -0.819837 | 9.415555e-53 | -8.615850e-47 |
| Msa0654560 | Msa1355250 | -0.831026 | 2.107385e-55 | -8.615850e-47 |
| Msa0659020 | Msa1355250 | -0.826964 | 2.031190e-54 | -8.615850e-47 |
| Msa0660070 | Msa1355250 | -0.831514 | 1.599199e-55 | -8.615850e-47 |
| Msa0661480 | Msa1355250 | 0.806201 | 9.228043e-50 | -8.615850e-47 |
| Msa0663580 | Msa1355250 | -0.806529 | 7.872018e-50 | -8.615850e-47 |
| Msa0684030 | Msa1355250 | -0.841292 | 5.191193e-58 | -8.615850e-47 |
| Msa0688880 | Msa1355250 | -0.822097 | 2.842761e-53 | -8.615850e-47 |
| Msa0696600 | Msa1355250 | -0.823250 | 1.532245e-53 | -8.615850e-47 |
| Msa0698110 | Msa1355250 | 0.825310 | 5.027464e-54 | -8.615850e-47 |
| Msa0701460 | Msa1355250 | -0.825138 | 5.518762e-54 | -8.615850e-47 |
| Msa0701530 | Msa1355250 | -0.823352 | 1.450438e-53 | -8.615850e-47 |
| Msa0702360 | Msa1355250 | -0.809848 | 1.544667e-50 | -8.615850e-47 |
| Msa0702560 | Msa1355250 | -0.809240 | 2.086059e-50 | -8.615850e-47 |
| Msa0705810 | Msa1355250 | -0.838720 | 2.431238e-57 | -8.615850e-47 |
| Msa0706130 | Msa1355250 | -0.823873 | 1.095876e-53 | -8.615850e-47 |
| Msa0707880 | Msa1355250 | -0.831512 | 1.600751e-55 | -8.615850e-47 |
| Msa0717540 | Msa1355250 | -0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0719330 | Msa1355250 | -0.809683 | 1.676176e-50 | -8.615850e-47 |
| Msa0732970 | Msa1355250 | 0.840608 | 7.847864e-58 | -8.615850e-47 |
| Msa0733240 | Msa1355250 | -0.842691 | 2.214980e-58 | -8.615850e-47 |
| Msa0738460 | Msa1355250 | -0.815989 | 6.968072e-52 | -8.615850e-47 |
| Msa0742090 | Msa1355250 | -0.828470 | 8.833267e-55 | -8.615850e-47 |
| Msa0745010 | Msa1355250 | -0.805691 | 1.181097e-49 | -8.615850e-47 |
| Msa0749160 | Msa1355250 | -0.805428 | 1.341314e-49 | -8.615850e-47 |
| Msa0750200 | Msa1355250 | -0.803564 | 3.282866e-49 | -8.615850e-47 |
| Msa0754020 | Msa1355250 | -0.804647 | 1.954134e-49 | -8.615850e-47 |
| Msa0758880 | Msa1355250 | -0.818134 | 2.296232e-52 | -8.615850e-47 |
| Msa0761830 | Msa1355250 | 0.852770 | 3.712545e-61 | -8.615850e-47 |
| Msa0773960 | Msa1355250 | 0.827822 | 1.265074e-54 | -8.615850e-47 |
| Msa0774360 | Msa1355250 | -0.818880 | 1.555919e-52 | -8.615850e-47 |
| Msa0787360 | Msa1355250 | -0.813023 | 3.156728e-51 | -8.615850e-47 |
| Msa0790650 | Msa1355250 | -0.821920 | 3.123151e-53 | -8.615850e-47 |
| Msa0792410 | Msa1355250 | 0.810671 | 1.026439e-50 | -8.615850e-47 |
| Msa0793100 | Msa1355250 | -0.809686 | 1.673395e-50 | -8.615850e-47 |
| Msa0795910 | Msa1355250 | -0.800198 | 1.612632e-48 | -8.615850e-47 |
| Msa0797180 | Msa1355250 | -0.803083 | 4.129457e-49 | -8.615850e-47 |
| Msa0801920 | Msa1355250 | -0.820701 | 5.968013e-53 | -8.615850e-47 |
| Msa0802950 | Msa1355250 | -0.820422 | 6.918744e-53 | -8.615850e-47 |
| Msa0804170 | Msa1355250 | 0.841553 | 4.432782e-58 | -8.615850e-47 |
| Msa0812020 | Msa1355250 | -0.815957 | 7.083952e-52 | -8.615850e-47 |
| Msa0817880 | Msa1355250 | -0.807972 | 3.891996e-50 | -8.615850e-47 |
| Msa0823310 | Msa1355250 | -0.819250 | 1.281479e-52 | -8.615850e-47 |
| Msa0826940 | Msa1355250 | -0.808229 | 3.432112e-50 | -8.615850e-47 |
| Msa0833200 | Msa1355250 | -0.806433 | 8.246617e-50 | -8.615850e-47 |
| Msa0833360 | Msa1355250 | -0.800911 | 1.153903e-48 | -8.615850e-47 |
| Msa0838120 | Msa1355250 | -0.818804 | 1.618653e-52 | -8.615850e-47 |
| Msa0842180 | Msa1355250 | 0.816636 | 4.992521e-52 | -8.615850e-47 |
| Msa0121320 | Msa1355250 | 0.825121 | 5.569699e-54 | -8.615850e-47 |
| Msa0122170 | Msa1355250 | -0.843010 | 1.822343e-58 | -8.615850e-47 |
| Msa0124460 | Msa1355250 | -0.808111 | 3.636864e-50 | -8.615850e-47 |
| Msa0127110 | Msa1355250 | -0.804494 | 2.102613e-49 | -8.615850e-47 |
| Msa0127350 | Msa1355250 | -0.801091 | 1.060141e-48 | -8.615850e-47 |
| Msa0135470 | Msa1355250 | -0.809311 | 2.015018e-50 | -8.615850e-47 |
| Msa0137010 | Msa1355250 | -0.836840 | 7.391950e-57 | -8.615850e-47 |
| Msa0140870 | Msa1355250 | -0.812770 | 3.586073e-51 | -8.615850e-47 |
| Msa0141410 | Msa1355250 | 0.805149 | 1.534649e-49 | -8.615850e-47 |
| Msa0157030 | Msa1355250 | -0.837022 | 6.639424e-57 | -8.615850e-47 |
| Msa0165820 | Msa1355250 | -0.803740 | 3.017635e-49 | -8.615850e-47 |
| Msa0166180 | Msa1355250 | 0.824164 | 9.363392e-54 | -8.615850e-47 |
| Msa0167150 | Msa1355250 | -0.810224 | 1.281645e-50 | -8.615850e-47 |
| Msa0168950 | Msa1355250 | -0.806902 | 6.565849e-50 | -8.615850e-47 |
| Msa0173600 | Msa1355250 | -0.801959 | 7.038661e-49 | -8.615850e-47 |
| Msa0175210 | Msa1355250 | -0.822594 | 2.179155e-53 | -8.615850e-47 |
| Msa0178440 | Msa1355250 | -0.804477 | 2.120237e-49 | -8.615850e-47 |
| Msa0180210 | Msa1355250 | 0.803889 | 2.810587e-49 | -8.615850e-47 |
| Msa0181560 | Msa1355250 | -0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa0184900 | Msa1355250 | -0.814318 | 1.637436e-51 | -8.615850e-47 |
| Msa0189150 | Msa1355250 | -0.807314 | 5.368956e-50 | -8.615850e-47 |
| Msa0194750 | Msa1355250 | -0.820466 | 6.759482e-53 | -8.615850e-47 |
| Msa0196260 | Msa1355250 | 0.814531 | 1.469441e-51 | -8.615850e-47 |
| Msa0208040 | Msa1355250 | -0.814884 | 1.227083e-51 | -8.615850e-47 |
| Msa0208710 | Msa1355250 | -0.808942 | 2.417319e-50 | -8.615850e-47 |
| Msa0209370 | Msa1355250 | -0.811660 | 6.264830e-51 | -8.615850e-47 |
| Msa0211460 | Msa1355250 | 0.846844 | 1.682757e-59 | -8.615850e-47 |
| Msa0212950 | Msa1355250 | -0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa0213510 | Msa1355250 | -0.805513 | 1.287459e-49 | -8.615850e-47 |
| Msa0225070 | Msa1355250 | -0.817458 | 3.263409e-52 | -8.615850e-47 |
| Msa0227970 | Msa1355250 | -0.800218 | 1.598038e-48 | -8.615850e-47 |
| Msa0229350 | Msa1355250 | -0.806111 | 9.637998e-50 | -8.615850e-47 |
| Msa0236690 | Msa1355250 | -0.823145 | 1.621899e-53 | -8.615850e-47 |
| Msa1224820 | Msa1355250 | -0.807662 | 4.531081e-50 | -8.615850e-47 |
| Msa1225140 | Msa1355250 | -0.808946 | 2.412420e-50 | -8.615850e-47 |
| Msa1225240 | Msa1355250 | -0.805618 | 1.223768e-49 | -8.615850e-47 |
| Msa1225560 | Msa1355250 | 0.803473 | 3.428210e-49 | -8.615850e-47 |
| Msa1228350 | Msa1355250 | -0.800516 | 1.389665e-48 | -8.615850e-47 |
| Msa1228460 | Msa1355250 | -0.815686 | 8.141656e-52 | -8.615850e-47 |
| Msa1228600 | Msa1355250 | -0.814952 | 1.185508e-51 | -8.615850e-47 |
| Msa1239000 | Msa1355250 | -0.820764 | 5.773590e-53 | -8.615850e-47 |
| Msa1246830 | Msa1355250 | 0.806321 | 8.707726e-50 | -8.615850e-47 |
| Msa1255030 | Msa1355250 | -0.845528 | 3.840361e-59 | -8.615850e-47 |
| Msa1255710 | Msa1355250 | 0.822159 | 2.750266e-53 | -8.615850e-47 |
| Msa1257860 | Msa1355250 | -0.810626 | 1.049994e-50 | -8.615850e-47 |
| Msa1263520 | Msa1355250 | 0.816981 | 4.177467e-52 | -8.615850e-47 |
| Msa1265570 | Msa1355250 | 0.817518 | 3.163598e-52 | -8.615850e-47 |
| Msa1266120 | Msa1355250 | -0.827220 | 1.764296e-54 | -8.615850e-47 |
| Msa1269730 | Msa1355250 | -0.826731 | 2.310044e-54 | -8.615850e-47 |
| Msa1270850 | Msa1355250 | -0.803316 | 3.694920e-49 | -8.615850e-47 |
| Msa1273320 | Msa1355250 | 0.803227 | 3.855574e-49 | -8.615850e-47 |
| Msa1286860 | Msa1355250 | -0.814811 | 1.274006e-51 | -8.615850e-47 |
| Msa1288070 | Msa1355250 | 0.829427 | 5.180193e-55 | -8.615850e-47 |
| Msa1288970 | Msa1355250 | -0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa1291070 | Msa1355250 | -0.829805 | 4.192232e-55 | -8.615850e-47 |
| Msa1295210 | Msa1355250 | -0.817725 | 2.840684e-52 | -8.615850e-47 |
| Msa1295480 | Msa1355250 | -0.823812 | 1.132220e-53 | -8.615850e-47 |
| Msa1297220 | Msa1355250 | -0.830468 | 2.887069e-55 | -8.615850e-47 |
| Msa1297490 | Msa1355250 | -0.812074 | 5.090727e-51 | -8.615850e-47 |
| Msa1298480 | Msa1355250 | -0.802474 | 5.515839e-49 | -8.615850e-47 |
| Msa1301610 | Msa1355250 | -0.828032 | 1.125986e-54 | -8.615850e-47 |
| Msa1320660 | Msa1355250 | -0.804525 | 2.072072e-49 | -8.615850e-47 |
| Msa1323260 | Msa1355250 | -0.836868 | 7.272572e-57 | -8.615850e-47 |
| Msa1331530 | Msa1355250 | -0.814612 | 1.410132e-51 | -8.615850e-47 |
| Msa1334670 | Msa1355250 | 0.815736 | 7.935540e-52 | -8.615850e-47 |
| Msa1335200 | Msa1355250 | -0.817079 | 3.971470e-52 | -8.615850e-47 |
| Msa1338600 | Msa1355250 | -0.814432 | 1.545435e-51 | -8.615850e-47 |
| Msa1339200 | Msa1355250 | 0.810124 | 1.347005e-50 | -8.615850e-47 |
| Msa1342360 | Msa1355250 | -0.816812 | 4.560518e-52 | -8.615850e-47 |
| Msa1343450 | Msa1355250 | -0.832550 | 8.866746e-56 | -8.615850e-47 |
| Msa0364910 | Msa1355250 | -0.824420 | 8.152651e-54 | -8.615850e-47 |
| Msa0367590 | Msa1355250 | -0.831555 | 1.561692e-55 | -8.615850e-47 |
| Msa0367600 | Msa1355250 | -0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0369100 | Msa1355250 | -0.811876 | 5.621527e-51 | -8.615850e-47 |
| Msa0370500 | Msa1355250 | 0.890147 | 1.281547e-73 | -8.615850e-47 |
| Msa0370690 | Msa1355250 | -0.800507 | 1.394994e-48 | -8.615850e-47 |
| Msa0375570 | Msa1355250 | -0.832652 | 8.364974e-56 | -8.615850e-47 |
| Msa0376480 | Msa1355250 | -0.815040 | 1.133293e-51 | -8.615850e-47 |
| Msa0378530 | Msa1355250 | -0.807973 | 3.890483e-50 | -8.615850e-47 |
| Msa0382020 | Msa1355250 | -0.807792 | 4.251273e-50 | -8.615850e-47 |
| Msa0386230 | Msa1355250 | -0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0386880 | Msa1355250 | 0.803753 | 2.999522e-49 | -8.615850e-47 |
| Msa0403740 | Msa1355250 | -0.814506 | 1.488065e-51 | -8.615850e-47 |
| Msa0404070 | Msa1355250 | -0.836876 | 7.234990e-57 | -8.615850e-47 |
| Msa0404710 | Msa1355250 | -0.802813 | 4.694526e-49 | -8.615850e-47 |
| Msa0415210 | Msa1355250 | -0.819561 | 1.088523e-52 | -8.615850e-47 |
| Msa0417990 | Msa1355250 | 0.930292 | 2.023730e-93 | -8.615850e-47 |
| Msa0424220 | Msa1355250 | -0.829359 | 5.381464e-55 | -8.615850e-47 |
| Msa0427260 | Msa1355250 | -0.802614 | 5.160293e-49 | -8.615850e-47 |
| Msa0428300 | Msa1355250 | -0.823204 | 1.571116e-53 | -8.615850e-47 |
| Msa0428330 | Msa1355250 | -0.815811 | 7.636037e-52 | -8.615850e-47 |
| Msa0428720 | Msa1355250 | -0.808421 | 3.123123e-50 | -8.615850e-47 |
| Msa0429000 | Msa1355250 | -0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0430040 | Msa1355250 | -0.828749 | 7.561188e-55 | -8.615850e-47 |
| Msa0431550 | Msa1355250 | -0.804666 | 1.936314e-49 | -8.615850e-47 |
| Msa0436100 | Msa1355250 | 0.816025 | 6.840588e-52 | -8.615850e-47 |
| Msa0437790 | Msa1355250 | -0.800579 | 1.349183e-48 | -8.615850e-47 |
| Msa0447830 | Msa1355250 | -0.800448 | 1.434723e-48 | -8.615850e-47 |
| Msa0456450 | Msa1355250 | -0.815965 | 7.054827e-52 | -8.615850e-47 |
| Msa0460220 | Msa1355250 | -0.819593 | 1.070507e-52 | -8.615850e-47 |
| Msa0464510 | Msa1355250 | 0.843342 | 1.485951e-58 | -8.615850e-47 |
| Msa0467170 | Msa1355250 | 0.806068 | 9.844357e-50 | -8.615850e-47 |
| Msa0467330 | Msa1355250 | 0.808959 | 2.396501e-50 | -8.615850e-47 |
| Msa0468390 | Msa1355250 | 0.803578 | 3.261300e-49 | -8.615850e-47 |
| Msa0471130 | Msa1355250 | -0.850551 | 1.577964e-60 | -8.615850e-47 |
| Msa0474220 | Msa1355250 | -0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0474660 | Msa1355250 | -0.801192 | 1.011011e-48 | -8.615850e-47 |
| Msa0476560 | Msa1355250 | -0.805358 | 1.387102e-49 | -8.615850e-47 |
| Msa0481670 | Msa1355250 | 0.807757 | 4.325559e-50 | -8.615850e-47 |
| Msa0998660 | Msa1355250 | -0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa1006170 | Msa1355250 | 0.802052 | 6.737359e-49 | -8.615850e-47 |
| Msa1025440 | Msa1355250 | -0.809257 | 2.069231e-50 | -8.615850e-47 |
| Msa1028890 | Msa1355250 | -0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa1029860 | Msa1355250 | 0.804813 | 1.804305e-49 | -8.615850e-47 |
| Msa1036020 | Msa1355250 | 0.808321 | 3.280679e-50 | -8.615850e-47 |
| Msa1036260 | Msa1355250 | -0.819187 | 1.324996e-52 | -8.615850e-47 |
| Msa1044050 | Msa1355250 | -0.804244 | 2.371265e-49 | -8.615850e-47 |
| Msa1068010 | Msa1355250 | -0.818899 | 1.540615e-52 | -8.615850e-47 |
| Msa1068730 | Msa1355250 | 0.815068 | 1.117284e-51 | -8.615850e-47 |
| Msa1070630 | Msa1355250 | -0.803847 | 2.867390e-49 | -8.615850e-47 |
| Msa1071380 | Msa1355250 | -0.803345 | 3.643261e-49 | -8.615850e-47 |
| Msa1076280 | Msa1355250 | 0.802995 | 4.304664e-49 | -8.615850e-47 |
| Msa1078120 | Msa1355250 | -0.800536 | 1.376634e-48 | -8.615850e-47 |
| Msa1078600 | Msa1355250 | -0.835142 | 1.992996e-56 | -8.615850e-47 |
| Msa1078770 | Msa1355250 | -0.830498 | 2.839929e-55 | -8.615850e-47 |
| Msa1106730 | Msa1355250 | -0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa0253230 | Msa1355250 | -0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0255770 | Msa1355250 | -0.805794 | 1.123896e-49 | -8.615850e-47 |
| Msa0259570 | Msa1355250 | -0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0266140 | Msa1355250 | -0.815833 | 7.547663e-52 | -8.615850e-47 |
| Msa0267450 | Msa1355250 | -0.833546 | 5.011014e-56 | -8.615850e-47 |
| Msa0267510 | Msa1355250 | -0.831505 | 1.607213e-55 | -8.615850e-47 |
| Msa0269240 | Msa1355250 | 0.812223 | 4.722495e-51 | -8.615850e-47 |
| Msa0269660 | Msa1355250 | -0.802385 | 5.753180e-49 | -8.615850e-47 |
| Msa0270730 | Msa1355250 | -0.813891 | 2.034186e-51 | -8.615850e-47 |
| Msa0276800 | Msa1355250 | -0.819117 | 1.374504e-52 | -8.615850e-47 |
| Msa0279810 | Msa1355250 | 0.840040 | 1.104888e-57 | -8.615850e-47 |
| Msa0290800 | Msa1355250 | 0.848724 | 5.107962e-60 | -8.615850e-47 |
| Msa0299130 | Msa1355250 | -0.803107 | 4.082663e-49 | -8.615850e-47 |
| Msa0303920 | Msa1355250 | 0.805003 | 1.646109e-49 | -8.615850e-47 |
| Msa0304060 | Msa1355250 | -0.827412 | 1.587437e-54 | -8.615850e-47 |
| Msa0307630 | Msa1355250 | 0.809735 | 1.633400e-50 | -8.615850e-47 |
| Msa0316720 | Msa1355250 | -0.805502 | 1.294221e-49 | -8.615850e-47 |
| Msa0319220 | Msa1355250 | 0.844380 | 7.838002e-59 | -8.615850e-47 |
| Msa0328870 | Msa1355250 | 0.850659 | 1.472161e-60 | -8.615850e-47 |
| Msa0336520 | Msa1355250 | 0.805631 | 1.215935e-49 | -8.615850e-47 |
| Msa0343230 | Msa1355250 | -0.800321 | 1.522728e-48 | -8.615850e-47 |
| Msa0349220 | Msa1355250 | -0.821332 | 4.270513e-53 | -8.615850e-47 |
| Msa0349930 | Msa1355250 | 0.804092 | 2.549917e-49 | -8.615850e-47 |
| Msa0364030 | Msa1355250 | -0.815595 | 8.531098e-52 | -8.615850e-47 |
| Msa1109500 | Msa1355250 | -0.809989 | 1.440819e-50 | -8.615850e-47 |
| Msa1115600 | Msa1355250 | 0.801142 | 1.035259e-48 | -8.615850e-47 |
| Msa1122710 | Msa1355250 | -0.810439 | 1.152344e-50 | -8.615850e-47 |
| Msa1126980 | Msa1355250 | -0.800147 | 1.651914e-48 | -8.615850e-47 |
| Msa1129880 | Msa1355250 | -0.808151 | 3.566135e-50 | -8.615850e-47 |
| Msa1130850 | Msa1355250 | -0.822215 | 2.668612e-53 | -8.615850e-47 |
| Msa1130910 | Msa1355250 | -0.820105 | 8.174789e-53 | -8.615850e-47 |
| Msa1132880 | Msa1355250 | -0.802001 | 6.901539e-49 | -8.615850e-47 |
| Msa1133440 | Msa1355250 | -0.834291 | 3.263459e-56 | -8.615850e-47 |
| Msa1136770 | Msa1355250 | -0.809143 | 2.189386e-50 | -8.615850e-47 |
| Msa1143060 | Msa1355250 | -0.801443 | 8.983441e-49 | -8.615850e-47 |
| Msa1143860 | Msa1355250 | -0.808164 | 3.542340e-50 | -8.615850e-47 |
| Msa1149910 | Msa1355250 | 0.807321 | 5.351484e-50 | -8.615850e-47 |
| Msa1156430 | Msa1355250 | -0.825971 | 3.503127e-54 | -8.615850e-47 |
| Msa1158450 | Msa1355250 | -0.809989 | 1.440291e-50 | -8.615850e-47 |
| Msa1169600 | Msa1355250 | -0.827560 | 1.462326e-54 | -8.615850e-47 |
| Msa1191540 | Msa1355250 | -0.801097 | 1.057183e-48 | -8.615850e-47 |
| Msa1191960 | Msa1355250 | -0.801357 | 9.352519e-49 | -8.615850e-47 |
| Msa1192360 | Msa1355250 | 0.823255 | 1.528101e-53 | -8.615850e-47 |
| Msa1203320 | Msa1355250 | -0.810935 | 8.998273e-51 | -8.615850e-47 |
| Msa1205270 | Msa1355250 | -0.807429 | 5.076788e-50 | -8.615850e-47 |
| Msa1207660 | Msa1355250 | -0.808497 | 3.008496e-50 | -8.615850e-47 |
| Msa1207770 | Msa1355250 | -0.811814 | 5.798286e-51 | -8.615850e-47 |
| Msa1209990 | Msa1355250 | -0.801406 | 9.140634e-49 | -8.615850e-47 |
| Msa1217890 | Msa1355250 | 0.803792 | 2.943226e-49 | -8.615850e-47 |
| Msa1220720 | Msa1355250 | 0.812396 | 4.330710e-51 | -8.615850e-47 |
| Msa1222900 | Msa1355250 | -0.801660 | 8.107734e-49 | -8.615850e-47 |
| Msa1223540 | Msa1355250 | 0.815506 | 8.929151e-52 | -8.615850e-47 |
| Msa1223620 | Msa1355250 | 0.818958 | 1.493708e-52 | -8.615850e-47 |
| Msa0506700 | Msa1355250 | -0.803751 | 3.001328e-49 | -8.615850e-47 |
| Msa0518410 | Msa1355250 | 0.826702 | 2.346432e-54 | -8.615850e-47 |
| Msa0519070 | Msa1355250 | -0.823315 | 1.480221e-53 | -8.615850e-47 |
| Msa0522810 | Msa1355250 | -0.818515 | 1.882583e-52 | -8.615850e-47 |
| Msa0524830 | Msa1355250 | -0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa0525180 | Msa1355250 | -0.805319 | 1.413812e-49 | -8.615850e-47 |
| Msa0528180 | Msa1355250 | 0.801671 | 8.065834e-49 | -8.615850e-47 |
| Msa0530220 | Msa1355250 | -0.821792 | 3.343573e-53 | -8.615850e-47 |
| Msa0530250 | Msa1355250 | -0.815076 | 1.112346e-51 | -8.615850e-47 |
| Msa0538050 | Msa1355250 | -0.800651 | 1.304318e-48 | -8.615850e-47 |
| Msa0548260 | Msa1355250 | -0.860936 | 1.458937e-63 | -8.615850e-47 |
| Msa0549900 | Msa1355250 | 0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0550770 | Msa1355250 | -0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0550800 | Msa1355250 | -0.809279 | 2.046590e-50 | -8.615850e-47 |
| Msa0555280 | Msa1355250 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa0560950 | Msa1355250 | 0.800489 | 1.407017e-48 | -8.615850e-47 |
| Msa0566090 | Msa1355250 | -0.824688 | 7.048031e-54 | -8.615850e-47 |
| Msa0567330 | Msa1355250 | 0.818723 | 1.689437e-52 | -8.615850e-47 |
| Msa0567570 | Msa1355250 | 0.815644 | 8.316118e-52 | -8.615850e-47 |
| Msa0568460 | Msa1355250 | -0.821213 | 4.551282e-53 | -8.615850e-47 |
| Msa0576320 | Msa1355250 | 0.821153 | 4.696538e-53 | -8.615850e-47 |
| Msa0576500 | Msa1355250 | -0.837188 | 6.022519e-57 | -8.615850e-47 |
| Msa0582270 | Msa1355250 | -0.801196 | 1.009093e-48 | -8.615850e-47 |
| Msa0585720 | Msa1355250 | -0.804440 | 2.157736e-49 | -8.615850e-47 |
| Msa0848670 | Msa1355250 | -0.813861 | 2.065630e-51 | -8.615850e-47 |
| Msa0852090 | Msa1355250 | -0.842342 | 2.741145e-58 | -8.615850e-47 |
| Msa0862230 | Msa1355250 | -0.804427 | 2.171777e-49 | -8.615850e-47 |
| Msa0898830 | Msa1355250 | -0.808245 | 3.404648e-50 | -8.615850e-47 |
| Msa0925630 | Msa1355250 | -0.802352 | 5.843226e-49 | -8.615850e-47 |
| Msa0928060 | Msa1355250 | -0.800177 | 1.628694e-48 | -8.615850e-47 |
| Msa0938150 | Msa1355250 | -0.800334 | 1.513562e-48 | -8.615850e-47 |
| Msa0941150 | Msa1355250 | -0.811882 | 5.606200e-51 | -8.615850e-47 |
| Msa0941410 | Msa1355250 | -0.801683 | 8.019055e-49 | -8.615850e-47 |
| Msa0941420 | Msa1355250 | -0.811089 | 8.334353e-51 | -8.615850e-47 |
| Msa0964400 | Msa1355250 | -0.804806 | 1.810447e-49 | -8.615850e-47 |
| Msa0967900 | Msa1355250 | -0.826217 | 3.062878e-54 | -8.615850e-47 |
| Msa0968970 | Msa1355250 | -0.813783 | 2.149098e-51 | -8.615850e-47 |
| Msa0973010 | Msa1355250 | -0.821406 | 4.105746e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355250 | MtrunA17_Chr3g0115581 | 98.844 | 346 | 3 | 1 | 1 | 346 | 1 | 345 | 0.0 | 706 |
| Msa1355250 | MtrunA17_Chr8g0382611 | 79.842 | 253 | 51 | 0 | 93 | 345 | 66 | 318 | 1.10e-156 | 442 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355250 | AT1G22170.2 | 73.089 | 327 | 87 | 1 | 19 | 344 | 1 | 327 | 9.05e-179 | 499 |
| Msa1355250 | AT1G22170.1 | 73.089 | 327 | 87 | 1 | 19 | 344 | 1 | 327 | 9.05e-179 | 499 |
| Msa1355250 | AT1G78050.1 | 72.000 | 325 | 79 | 4 | 25 | 343 | 9 | 327 | 9.80e-172 | 481 |
Find 90 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTAAAGCTAGGTTATTT+TGG | 0.160093 | tig0014622:+13704 | Msa1355250:three_prime_UTR |
| ATACACCGCTTCTGATATTT+TGG | 0.174047 | tig0014622:-10795 | None:intergenic |
| ATTTATCATACTTGATTTCT+TGG | 0.211753 | tig0014622:-10986 | None:intergenic |
| ACGACTCACCGTGTCGAATA+AGG | 0.265042 | tig0014622:-11192 | None:intergenic |
| CTACCTTCTTACGGCGGTGC+TGG | 0.280926 | tig0014622:-11381 | None:intergenic |
| ACCTACTTGGTCTCTGAAAT+AGG | 0.318239 | tig0014622:-12023 | None:intergenic |
| ATATCAGAAGCGGTGTATTA+AGG | 0.323655 | tig0014622:+10800 | Msa1355250:CDS |
| GTATGACAGTATTTCCAAAT+TGG | 0.353070 | tig0014622:-13891 | None:intergenic |
| TCAAAGAAGGAAGATTCATT+AGG | 0.358232 | tig0014622:+12571 | Msa1355250:CDS |
| TTGCAATCTCATTCTCATCT+TGG | 0.370490 | tig0014622:+10757 | Msa1355250:CDS |
| ATTGAACCCCAACTTCTATC+TGG | 0.372989 | tig0014622:+12339 | Msa1355250:CDS |
| GAAGTATGTCACCATGCTAT+TGG | 0.383236 | tig0014622:+10730 | Msa1355250:CDS |
| GATGTAAATATGAGATCAAC+TGG | 0.389772 | tig0014622:-11316 | None:intergenic |
| TAAAATGCATACCTTGGTAT+AGG | 0.393283 | tig0014622:-12634 | None:intergenic |
| TACAGCGTTTGGCTCTTTAC+AGG | 0.396467 | tig0014622:+13451 | Msa1355250:intron |
| AACCAAAATAACCTAGCTTT+AGG | 0.399557 | tig0014622:-13706 | None:intergenic |
| TCCTCCCAATGGTGAAAGTC+TGG | 0.399875 | tig0014622:+11976 | Msa1355250:CDS |
| CATTCTTTCCAGATAGAAGT+TGG | 0.400888 | tig0014622:-12347 | None:intergenic |
| TTTGTCGAGATACATGATAA+TGG | 0.419771 | tig0014622:-12403 | None:intergenic |
| CAAGAAACAGCAGACAGATA+TGG | 0.420753 | tig0014622:+11911 | Msa1355250:CDS |
| TGATTTCTTGGAAGTGTCAT+TGG | 0.426824 | tig0014622:-10974 | None:intergenic |
| CCCATAAAACCAACTGAAGC+TGG | 0.429711 | tig0014622:+12603 | Msa1355250:CDS |
| ATTCTTTCCAGATAGAAGTT+GGG | 0.435809 | tig0014622:-12346 | None:intergenic |
| CAACAACTGACGTCTGTGAA+TGG | 0.445999 | tig0014622:-10921 | None:intergenic |
| AGTTGCCAAGCTGCTATGAC+TGG | 0.450681 | tig0014622:-11746 | None:intergenic |
| ATTAGTTTAGAACTGTCAAC+TGG | 0.450749 | tig0014622:+12528 | Msa1355250:CDS |
| TTTCAGGTATGGAGAACTAC+AGG | 0.452952 | tig0014622:+11877 | Msa1355250:intron |
| CTCTCGTTGTGCATAACAAT+AGG | 0.456310 | tig0014622:-11665 | None:intergenic |
| TGCAGTAATGGCTTGTCAAA+GGG | 0.459448 | tig0014622:+10844 | Msa1355250:CDS |
| TCATTCTCGCTACCTTCTTA+CGG | 0.461824 | tig0014622:-11390 | None:intergenic |
| CTTACGGCGGTGCTGGGTCA+TGG | 0.466672 | tig0014622:-11374 | None:intergenic |
| TACCTTCTTACGGCGGTGCT+GGG | 0.479212 | tig0014622:-11380 | None:intergenic |
| TCTTTGAAAATGTAAAGCAT+TGG | 0.479538 | tig0014622:-12555 | None:intergenic |
| GGCTCTTTACAGGCAGAAGT+TGG | 0.481694 | tig0014622:+13461 | Msa1355250:CDS |
| AACAACTGACGTCTGTGAAT+GGG | 0.484469 | tig0014622:-10920 | None:intergenic |
| ATTTCCAGACTTTCACCATT+GGG | 0.485719 | tig0014622:-11980 | None:intergenic |
| CATAGCTTCGGCGCCACTCA+TGG | 0.486599 | tig0014622:-11946 | None:intergenic |
| ATAGATGAGGCAATTGAAGC+TGG | 0.487774 | tig0014622:+11274 | Msa1355250:CDS |
| AAGGGAATAAGTAGCCGCTT+TGG | 0.491574 | tig0014622:+10862 | Msa1355250:CDS |
| TTCGACACGGTGAGTCGTTG+TGG | 0.492540 | tig0014622:+11197 | Msa1355250:CDS |
| CATTTCCAGACTTTCACCAT+TGG | 0.497995 | tig0014622:-11981 | None:intergenic |
| ACAGACGTCAGTTGTTGATC+CGG | 0.498795 | tig0014622:+10927 | Msa1355250:CDS |
| TCTGTGAAGCTTCTGATCAA+TGG | 0.499485 | tig0014622:-13616 | None:intergenic |
| TTGTTCTCAGTATTACTGCT+AGG | 0.504027 | tig0014622:+13657 | Msa1355250:three_prime_UTR |
| AATGAGAAGAATTTGTTCAC+AGG | 0.510239 | tig0014622:+11220 | Msa1355250:CDS |
| CTGCAGTAATGGCTTGTCAA+AGG | 0.514800 | tig0014622:+10843 | Msa1355250:CDS |
| TGTATTAAGGTTGGCGACAA+AGG | 0.518818 | tig0014622:+10813 | Msa1355250:CDS |
| TTCTTTCCAGATAGAAGTTG+GGG | 0.521049 | tig0014622:-12345 | None:intergenic |
| AAGAAGGAAGATTCATTAGG+AGG | 0.521386 | tig0014622:+12574 | Msa1355250:CDS |
| AAGGAAGATTCATTAGGAGG+GGG | 0.527349 | tig0014622:+12577 | Msa1355250:CDS |
| GTGCTGGGTCATGGCAAGCA+TGG | 0.530804 | tig0014622:-11365 | None:intergenic |
| GAATTACAATACAATTCCTC+TGG | 0.533183 | tig0014622:-10885 | None:intergenic |
| GAGGAGGTATGTCATAGCTT+CGG | 0.535709 | tig0014622:-11958 | None:intergenic |
| GACCCAGCACCGCCGTAAGA+AGG | 0.536334 | tig0014622:+11378 | Msa1355250:CDS |
| TACTGTAATACTTTCAGTTG+AGG | 0.540444 | tig0014622:+13847 | Msa1355250:three_prime_UTR |
| TTAGCACACATCCTAAAGCT+AGG | 0.547892 | tig0014622:+13695 | Msa1355250:three_prime_UTR |
| TCTATACCCTTCTTGCTAAG+TGG | 0.548267 | tig0014622:-11256 | None:intergenic |
| AGAAGGAAGATTCATTAGGA+GGG | 0.551932 | tig0014622:+12575 | Msa1355250:CDS |
| AGACTTTCACCATTGGGAGG+AGG | 0.552095 | tig0014622:-11974 | None:intergenic |
| CAGAAGCGGTGTATTAAGGT+TGG | 0.552496 | tig0014622:+10804 | Msa1355250:CDS |
| AAGCTTCACAGATGAGTCAC+TGG | 0.556436 | tig0014622:+13627 | Msa1355250:three_prime_UTR |
| TCTCGACAAATTAACTTCCC+AGG | 0.565688 | tig0014622:+12416 | Msa1355250:CDS |
| GCATAAACTCCAGCTTCAGT+TGG | 0.565994 | tig0014622:-12612 | None:intergenic |
| GAAGGAAGATTCATTAGGAG+GGG | 0.570970 | tig0014622:+12576 | Msa1355250:CDS |
| TGTTCATGAACTTCAAAATG+TGG | 0.585106 | tig0014622:+13819 | Msa1355250:three_prime_UTR |
| TGATGTACCACTTAGCAAGA+AGG | 0.585970 | tig0014622:+11249 | Msa1355250:CDS |
| GAATAGCCCAATCACCTCCT+GGG | 0.586449 | tig0014622:-12433 | None:intergenic |
| CCATTCCAGTCATAGCAGCT+TGG | 0.588646 | tig0014622:+11741 | Msa1355250:CDS |
| CATCACCAAAATATCAGAAG+CGG | 0.592490 | tig0014622:+10790 | Msa1355250:CDS |
| AGAGTGAACAAGCAAAGGCA+TGG | 0.594259 | tig0014622:+11684 | Msa1355250:CDS |
| TAAGTAGCCGCTTTGGCCAG+AGG | 0.595270 | tig0014622:+10869 | Msa1355250:CDS |
| GATGTACCACTTAGCAAGAA+GGG | 0.602199 | tig0014622:+11250 | Msa1355250:CDS |
| TCCAGACTTTCACCATTGGG+AGG | 0.603226 | tig0014622:-11977 | None:intergenic |
| CCAAGCTGCTATGACTGGAA+TGG | 0.606063 | tig0014622:-11741 | None:intergenic |
| CAACGAGAGTGAACAAGCAA+AGG | 0.606715 | tig0014622:+11679 | Msa1355250:CDS |
| TTCACAGATGAGTCACTGGT+GGG | 0.618785 | tig0014622:+13631 | Msa1355250:three_prime_UTR |
| TACAATTCCTCTGGCCAAAG+CGG | 0.621755 | tig0014622:-10876 | None:intergenic |
| CTTCACAGATGAGTCACTGG+TGG | 0.623297 | tig0014622:+13630 | Msa1355250:three_prime_UTR |
| ATGTTATGATTGCCGCACAC+GGG | 0.631044 | tig0014622:+12367 | Msa1355250:CDS |
| AATGTTATGATTGCCGCACA+CGG | 0.634751 | tig0014622:+12366 | Msa1355250:CDS |
| TAGCAAGAAGGGTATAGATG+AGG | 0.640367 | tig0014622:+11261 | Msa1355250:CDS |
| GTAAAGAACAAGTCCATGAG+TGG | 0.643785 | tig0014622:+11933 | Msa1355250:CDS |
| TCTCAATGAATTCCCGTGTG+CGG | 0.651372 | tig0014622:-12379 | None:intergenic |
| TATGACATACCTCCTCCCAA+TGG | 0.657183 | tig0014622:+11965 | Msa1355250:CDS |
| TTCAGGTATGGAGAACTACA+GGG | 0.659499 | tig0014622:+11878 | Msa1355250:intron |
| GCTTTGATCCTTATTCGACA+CGG | 0.660091 | tig0014622:+11184 | Msa1355250:CDS |
| ATTGCAAAGAGCCAATAGCA+TGG | 0.664561 | tig0014622:-10741 | None:intergenic |
| TTCTCGCTACCTTCTTACGG+CGG | 0.686843 | tig0014622:-11387 | None:intergenic |
| TGGAGTTTATGCCTATACCA+AGG | 0.695146 | tig0014622:+12623 | Msa1355250:CDS |
| CGACAAATTAACTTCCCAGG+AGG | 0.718042 | tig0014622:+12419 | Msa1355250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATCATCTTAAAT+GGG | - | tig0014622:12679-12698 | None:intergenic | 10.0% |
| !! | TCAATTAATATAAATCTTAA+AGG | - | tig0014622:12965-12984 | None:intergenic | 10.0% |
| !! | AAAAAATGTGAACTTATAAT+AGG | + | tig0014622:12074-12093 | Msa1355250:intron | 15.0% |
| !! | CTAAAAAAAATCATCTTAAA+TGG | - | tig0014622:12680-12699 | None:intergenic | 15.0% |
| !!! | CATTTAAGATGATTTTTTTT+AGG | + | tig0014622:12678-12697 | Msa1355250:intron | 15.0% |
| !!! | AGAAAGTTTTGATTTAAAAA+TGG | + | tig0014622:12707-12726 | Msa1355250:intron | 15.0% |
| !!! | TTCTAAAAATAATATGGTTT+AGG | + | tig0014622:13492-13511 | Msa1355250:exon | 15.0% |
| !! | ATTTATCATACTTGATTTCT+TGG | - | tig0014622:10989-11008 | None:intergenic | 20.0% |
| !! | TTAGAGAATATTAGTAAGTA+TGG | + | tig0014622:11484-11503 | Msa1355250:intron | 20.0% |
| !!! | TATAACAAAGACTAATTTTC+TGG | - | tig0014622:11579-11598 | None:intergenic | 20.0% |
| !! | TTCATAATTATTATCCTTTC+AGG | + | tig0014622:11861-11880 | Msa1355250:intron | 20.0% |
| !!! | TATACATATTGTAACTTGTA+AGG | + | tig0014622:12240-12259 | Msa1355250:intron | 20.0% |
| !!! | GAGATGTTCTAAAAATAATA+TGG | + | tig0014622:13486-13505 | Msa1355250:exon | 20.0% |
| !!! | ATATGCTATATTTTGATTCT+AGG | + | tig0014622:13560-13579 | Msa1355250:intron | 20.0% |
| !!! | TATGCTATATTTTGATTCTA+GGG | + | tig0014622:13561-13580 | Msa1355250:intron | 20.0% |
| ! | AGTTGAAATTGTCATATGAT+TGG | + | tig0014622:11114-11133 | Msa1355250:intron | 25.0% |
| ! | AGGAGAAGTTTCAAAAATTA+AGG | - | tig0014622:11803-11822 | None:intergenic | 25.0% |
| !! | AATTATTATCCTTTCAGGTA+TGG | + | tig0014622:11866-11885 | Msa1355250:intron | 25.0% |
| !!! | TCATAGTTAAGTGTTTTTTG+AGG | + | tig0014622:12142-12161 | Msa1355250:intron | 25.0% |
| ! | ATTCATTTACTACATTTGTC+TGG | - | tig0014622:12192-12211 | None:intergenic | 25.0% |
| !!! | AACTTGTAAGGTCAATTTTT+TGG | + | tig0014622:12252-12271 | Msa1355250:intron | 25.0% |
| !! | TCTTTGAAAATGTAAAGCAT+TGG | - | tig0014622:12558-12577 | None:intergenic | 25.0% |
| !! | ATGCTTTACATTTTCAAAGA+AGG | + | tig0014622:12558-12577 | Msa1355250:CDS | 25.0% |
| ! | AAAAATCATCTTAAATGGGA+CGG | - | tig0014622:12675-12694 | None:intergenic | 25.0% |
| ! | AAAAATGGATATTGTTTGTC+CGG | + | tig0014622:12722-12741 | Msa1355250:intron | 25.0% |
| !! | TCTATGTTTTATATTGCTAG+TGG | - | tig0014622:12771-12790 | None:intergenic | 25.0% |
| ! | TTGAATTTCATTCATGATTG+AGG | + | tig0014622:12981-13000 | Msa1355250:intron | 25.0% |
| ! | AATTCTACCAGAAAGAAAAA+GGG | - | tig0014622:13082-13101 | None:intergenic | 25.0% |
| ! | ATTAGGACTAGATTTATCTA+AGG | - | tig0014622:13120-13139 | None:intergenic | 25.0% |
| ! | AGGTATTACAACTTTCTATT+AGG | - | tig0014622:13137-13156 | None:intergenic | 25.0% |
| ! | TAATATGGTTTAGGTAAACA+CGG | + | tig0014622:13501-13520 | Msa1355250:intron | 25.0% |
| ! | CATATTAATAGAGAACGAAA+AGG | - | tig0014622:13545-13564 | None:intergenic | 25.0% |
| !!! | ATAGTTTTGAACATGTGTAA+TGG | + | tig0014622:13737-13756 | Msa1355250:three_prime_UTR | 25.0% |
| ! | AGATAAATGTCCTAAAAAGT+TGG | - | tig0014622:13774-13793 | None:intergenic | 25.0% |
| !!! | CTTTTTAGGACATTTATCTT+AGG | + | tig0014622:13775-13794 | Msa1355250:three_prime_UTR | 25.0% |
| ! | AAGGATTTTATCTGCAGTAA+TGG | + | tig0014622:10832-10851 | Msa1355250:CDS | 30.0% |
| GAATTACAATACAATTCCTC+TGG | - | tig0014622:10888-10907 | None:intergenic | 30.0% | |
| GCAACCAACAAAAATATACT+CGG | - | tig0014622:11048-11067 | None:intergenic | 30.0% | |
| ! | AATGAGAAGAATTTGTTCAC+AGG | + | tig0014622:11220-11239 | Msa1355250:CDS | 30.0% |
| GATGTAAATATGAGATCAAC+TGG | - | tig0014622:11319-11338 | None:intergenic | 30.0% | |
| AAACAAAATTTCCACCTACT+TGG | - | tig0014622:12039-12058 | None:intergenic | 30.0% | |
| TTAACTATGAAGTTCAACCA+GGG | - | tig0014622:12132-12151 | None:intergenic | 30.0% | |
| !!! | GTAAGGTCAATTTTTTGGTA+TGG | + | tig0014622:12257-12276 | Msa1355250:intron | 30.0% |
| TGGTTGAAGTTATCTTCATA+CGG | + | tig0014622:12277-12296 | Msa1355250:intron | 30.0% | |
| ATCTGCAATATTGGTATCAA+TGG | - | tig0014622:12321-12340 | None:intergenic | 30.0% | |
| ATTCTTTCCAGATAGAAGTT+GGG | - | tig0014622:12349-12368 | None:intergenic | 30.0% | |
| TTTGTCGAGATACATGATAA+TGG | - | tig0014622:12406-12425 | None:intergenic | 30.0% | |
| ACTAATAACCTGTCAAAAAG+CGG | - | tig0014622:12514-12533 | None:intergenic | 30.0% | |
| ! | ATTAGTTTAGAACTGTCAAC+TGG | + | tig0014622:12528-12547 | Msa1355250:CDS | 30.0% |
| TCAAAGAAGGAAGATTCATT+AGG | + | tig0014622:12571-12590 | Msa1355250:CDS | 30.0% | |
| TAAAATGCATACCTTGGTAT+AGG | - | tig0014622:12637-12656 | None:intergenic | 30.0% | |
| TTAAATGGGACGGAATATAA+AGG | - | tig0014622:12665-12684 | None:intergenic | 30.0% | |
| !! | CATAGAACATCAAAAGTGTT+TGG | + | tig0014622:12785-12804 | Msa1355250:intron | 30.0% |
| ACTTCTTGTAATCAAGTACT+AGG | + | tig0014622:12903-12922 | Msa1355250:intron | 30.0% | |
| TAAGCAAACATGTCAAACTA+AGG | - | tig0014622:13037-13056 | None:intergenic | 30.0% | |
| ! | TTCTTATCCCTTTTTCTTTC+TGG | + | tig0014622:13072-13091 | Msa1355250:intron | 30.0% |
| CAATTCTACCAGAAAGAAAA+AGG | - | tig0014622:13083-13102 | None:intergenic | 30.0% | |
| ! | TTTTGATCGAGAAAATCAAC+AGG | - | tig0014622:13163-13182 | None:intergenic | 30.0% |
| CTCGATCAAAATATTTCTCT+TGG | + | tig0014622:13172-13191 | Msa1355250:intron | 30.0% | |
| !!! | AATGACTGACACTTATTTTG+AGG | - | tig0014622:13268-13287 | None:intergenic | 30.0% |
| AATATGGTTTAGGTAAACAC+GGG | + | tig0014622:13502-13521 | Msa1355250:intron | 30.0% | |
| ! | ATCCTAAAGCTAGGTTATTT+TGG | + | tig0014622:13704-13723 | Msa1355250:three_prime_UTR | 30.0% |
| ! | AACCAAAATAACCTAGCTTT+AGG | - | tig0014622:13709-13728 | None:intergenic | 30.0% |
| !!! | TTTTGAAGTTCATGAACAAC+AGG | - | tig0014622:13817-13836 | None:intergenic | 30.0% |
| TGTTCATGAACTTCAAAATG+TGG | + | tig0014622:13819-13838 | Msa1355250:three_prime_UTR | 30.0% | |
| TACTGTAATACTTTCAGTTG+AGG | + | tig0014622:13847-13866 | Msa1355250:three_prime_UTR | 30.0% | |
| GTATGACAGTATTTCCAAAT+TGG | - | tig0014622:13894-13913 | None:intergenic | 30.0% | |
| TTGCAATCTCATTCTCATCT+TGG | + | tig0014622:10757-10776 | Msa1355250:CDS | 35.0% | |
| CATCACCAAAATATCAGAAG+CGG | + | tig0014622:10790-10809 | Msa1355250:CDS | 35.0% | |
| ! | ATACACCGCTTCTGATATTT+TGG | - | tig0014622:10798-10817 | None:intergenic | 35.0% |
| ATATCAGAAGCGGTGTATTA+AGG | + | tig0014622:10800-10819 | Msa1355250:CDS | 35.0% | |
| !!! | ATTGGTGTTGCTTTTTGAAG+GGG | - | tig0014622:10959-10978 | None:intergenic | 35.0% |
| !!! | CATTGGTGTTGCTTTTTGAA+GGG | - | tig0014622:10960-10979 | None:intergenic | 35.0% |
| !!! | TCATTGGTGTTGCTTTTTGA+AGG | - | tig0014622:10961-10980 | None:intergenic | 35.0% |
| !! | TGATTTCTTGGAAGTGTCAT+TGG | - | tig0014622:10977-10996 | None:intergenic | 35.0% |
| !! | TGTGCCGAGTATATTTTTGT+TGG | + | tig0014622:11041-11060 | Msa1355250:intron | 35.0% |
| ATTTCCAGACTTTCACCATT+GGG | - | tig0014622:11983-12002 | None:intergenic | 35.0% | |
| CTTAACTATGAAGTTCAACC+AGG | - | tig0014622:12133-12152 | None:intergenic | 35.0% | |
| TTCTTTCCAGATAGAAGTTG+GGG | - | tig0014622:12348-12367 | None:intergenic | 35.0% | |
| CATTCTTTCCAGATAGAAGT+TGG | - | tig0014622:12350-12369 | None:intergenic | 35.0% | |
| TAATAACCTGTCAAAAAGCG+GGG | - | tig0014622:12512-12531 | None:intergenic | 35.0% | |
| CTAATAACCTGTCAAAAAGC+GGG | - | tig0014622:12513-12532 | None:intergenic | 35.0% | |
| AAGAAGGAAGATTCATTAGG+AGG | + | tig0014622:12574-12593 | Msa1355250:CDS | 35.0% | |
| AGAAGGAAGATTCATTAGGA+GGG | + | tig0014622:12575-12594 | Msa1355250:CDS | 35.0% | |
| GTCGTATAAAATGCATACCT+TGG | - | tig0014622:12643-12662 | None:intergenic | 35.0% | |
| ! | TTCTTTCTGGTAGAATTGCA+AGG | + | tig0014622:13085-13104 | Msa1355250:intron | 35.0% |
| !! | TGGCTTTCTAAGATGTTAGT+TGG | + | tig0014622:13192-13211 | Msa1355250:intron | 35.0% |
| TTGGCATGAGTAAGAAATTC+TGG | + | tig0014622:13211-13230 | Msa1355250:intron | 35.0% | |
| TAAGTGTCAGTCATTAACGT+CGG | + | tig0014622:13273-13292 | Msa1355250:intron | 35.0% | |
| AACCAAGTAAAGTCGTTAGT+GGG | - | tig0014622:13432-13451 | None:intergenic | 35.0% | |
| TAACCAAGTAAAGTCGTTAG+TGG | - | tig0014622:13433-13452 | None:intergenic | 35.0% | |
| TTGTTCTCAGTATTACTGCT+AGG | + | tig0014622:13657-13676 | Msa1355250:three_prime_UTR | 35.0% | |
| GTAAAAAACGAGTGCCAATT+TGG | + | tig0014622:13877-13896 | Msa1355250:three_prime_UTR | 35.0% | |
| GAAGTATGTCACCATGCTAT+TGG | + | tig0014622:10730-10749 | Msa1355250:CDS | 40.0% | |
| ATTGCAAAGAGCCAATAGCA+TGG | - | tig0014622:10744-10763 | None:intergenic | 40.0% | |
| TGTATTAAGGTTGGCGACAA+AGG | + | tig0014622:10813-10832 | Msa1355250:CDS | 40.0% | |
| ! | TGCAGTAATGGCTTGTCAAA+GGG | + | tig0014622:10844-10863 | Msa1355250:CDS | 40.0% |
| AACAACTGACGTCTGTGAAT+GGG | - | tig0014622:10923-10942 | None:intergenic | 40.0% | |
| ! | TGTTGGTTGCTTCTTGAAGT+TGG | + | tig0014622:11058-11077 | Msa1355250:intron | 40.0% |
| AAGTTGGATCATCGAGTGTT+AGG | + | tig0014622:11074-11093 | Msa1355250:intron | 40.0% | |
| GCTTTGATCCTTATTCGACA+CGG | + | tig0014622:11184-11203 | Msa1355250:CDS | 40.0% | |
| TGATGTACCACTTAGCAAGA+AGG | + | tig0014622:11249-11268 | Msa1355250:CDS | 40.0% | |
| GATGTACCACTTAGCAAGAA+GGG | + | tig0014622:11250-11269 | Msa1355250:CDS | 40.0% | |
| TCTATACCCTTCTTGCTAAG+TGG | - | tig0014622:11259-11278 | None:intergenic | 40.0% | |
| ! | TAGCAAGAAGGGTATAGATG+AGG | + | tig0014622:11261-11280 | Msa1355250:CDS | 40.0% |
| ATAGATGAGGCAATTGAAGC+TGG | + | tig0014622:11274-11293 | Msa1355250:CDS | 40.0% | |
| TCATTCTCGCTACCTTCTTA+CGG | - | tig0014622:11393-11412 | None:intergenic | 40.0% | |
| !! | TTAACCATTAACTTGCCTGC+AGG | + | tig0014622:11640-11659 | Msa1355250:intron | 40.0% |
| CTCTCGTTGTGCATAACAAT+AGG | - | tig0014622:11668-11687 | None:intergenic | 40.0% | |
| TGCTATTCAGCACGTTGTAA+AGG | - | tig0014622:11823-11842 | None:intergenic | 40.0% | |
| TTACAACGTGCTGAATAGCA+CGG | + | tig0014622:11823-11842 | Msa1355250:intron | 40.0% | |
| TGTAGTTCTCCATACCTGAA+AGG | - | tig0014622:11878-11897 | None:intergenic | 40.0% | |
| ! | TTTCAGGTATGGAGAACTAC+AGG | + | tig0014622:11877-11896 | Msa1355250:intron | 40.0% |
| TTCAGGTATGGAGAACTACA+GGG | + | tig0014622:11878-11897 | Msa1355250:intron | 40.0% | |
| CAAGAAACAGCAGACAGATA+TGG | + | tig0014622:11911-11930 | Msa1355250:CDS | 40.0% | |
| GTAAAGAACAAGTCCATGAG+TGG | + | tig0014622:11933-11952 | Msa1355250:CDS | 40.0% | |
| CATTTCCAGACTTTCACCAT+TGG | - | tig0014622:11984-12003 | None:intergenic | 40.0% | |
| !! | ACCTACTTGGTCTCTGAAAT+AGG | - | tig0014622:12026-12045 | None:intergenic | 40.0% |
| TATTTCAGAGACCAAGTAGG+TGG | + | tig0014622:12025-12044 | Msa1355250:intron | 40.0% | |
| AAGTTCAACCAGGGAAAATG+GGG | - | tig0014622:12123-12142 | None:intergenic | 40.0% | |
| GAAGTTCAACCAGGGAAAAT+GGG | - | tig0014622:12124-12143 | None:intergenic | 40.0% | |
| TGAAGTTCAACCAGGGAAAA+TGG | - | tig0014622:12125-12144 | None:intergenic | 40.0% | |
| TGGGGTTCAATCTGCAATAT+TGG | - | tig0014622:12330-12349 | None:intergenic | 40.0% | |
| ATTGAACCCCAACTTCTATC+TGG | + | tig0014622:12339-12358 | Msa1355250:CDS | 40.0% | |
| AATGTTATGATTGCCGCACA+CGG | + | tig0014622:12366-12385 | Msa1355250:CDS | 40.0% | |
| TCTCGACAAATTAACTTCCC+AGG | + | tig0014622:12416-12435 | Msa1355250:CDS | 40.0% | |
| !!! | ATTTTTCCCCGCTTTTTGAC+AGG | + | tig0014622:12503-12522 | Msa1355250:intron | 40.0% |
| GAAGGAAGATTCATTAGGAG+GGG | + | tig0014622:12576-12595 | Msa1355250:CDS | 40.0% | |
| AAGGAAGATTCATTAGGAGG+GGG | + | tig0014622:12577-12596 | Msa1355250:CDS | 40.0% | |
| !!! | CCAGCTTCAGTTGGTTTTAT+GGG | - | tig0014622:12606-12625 | None:intergenic | 40.0% |
| !!! | TCCAGCTTCAGTTGGTTTTA+TGG | - | tig0014622:12607-12626 | None:intergenic | 40.0% |
| TGGAGTTTATGCCTATACCA+AGG | + | tig0014622:12623-12642 | Msa1355250:CDS | 40.0% | |
| ATGGATATTGTTTGTCCGGA+AGG | + | tig0014622:12726-12745 | Msa1355250:intron | 40.0% | |
| TGAGAGTCTAGATCGTATGT+TGG | + | tig0014622:12934-12953 | Msa1355250:intron | 40.0% | |
| GTCTAGATCGTATGTTGGAA+AGG | + | tig0014622:12939-12958 | Msa1355250:intron | 40.0% | |
| TCGAGAAAATCAACAGGTCA+AGG | - | tig0014622:13157-13176 | None:intergenic | 40.0% | |
| !! | CTGATGCTCTAAAATGATGC+TGG | + | tig0014622:13353-13372 | Msa1355250:intron | 40.0% |
| CTTTACTTGGTTACAGCGTT+TGG | + | tig0014622:13440-13459 | Msa1355250:intron | 40.0% | |
| TCTGTGAAGCTTCTGATCAA+TGG | - | tig0014622:13619-13638 | None:intergenic | 40.0% | |
| TTAGCACACATCCTAAAGCT+AGG | + | tig0014622:13695-13714 | Msa1355250:three_prime_UTR | 40.0% | |
| ! | AGACCAGCTTCCAACTTTTT+AGG | + | tig0014622:13761-13780 | Msa1355250:three_prime_UTR | 40.0% |
| TGTCCTAAAAAGTTGGAAGC+TGG | - | tig0014622:13767-13786 | None:intergenic | 40.0% | |
| CAGAAGCGGTGTATTAAGGT+TGG | + | tig0014622:10804-10823 | Msa1355250:CDS | 45.0% | |
| ! | CTGCAGTAATGGCTTGTCAA+AGG | + | tig0014622:10843-10862 | Msa1355250:CDS | 45.0% |
| AAGGGAATAAGTAGCCGCTT+TGG | + | tig0014622:10862-10881 | Msa1355250:CDS | 45.0% | |
| TACAATTCCTCTGGCCAAAG+CGG | - | tig0014622:10879-10898 | None:intergenic | 45.0% | |
| CAACAACTGACGTCTGTGAA+TGG | - | tig0014622:10924-10943 | None:intergenic | 45.0% | |
| ACAGACGTCAGTTGTTGATC+CGG | + | tig0014622:10927-10946 | Msa1355250:CDS | 45.0% | |
| !! | CTTTTTGAAGGGGACAACAC+CGG | - | tig0014622:10949-10968 | None:intergenic | 45.0% |
| TGGATCATCGAGTGTTAGGT+TGG | + | tig0014622:11078-11097 | Msa1355250:intron | 45.0% | |
| CAAAGCTGCTTCATCTGAGT+TGG | - | tig0014622:11170-11189 | None:intergenic | 45.0% | |
| CAACGAGAGTGAACAAGCAA+AGG | + | tig0014622:11679-11698 | Msa1355250:CDS | 45.0% | |
| AGAGTGAACAAGCAAAGGCA+TGG | + | tig0014622:11684-11703 | Msa1355250:CDS | 45.0% | |
| ! | GAGGAGGTATGTCATAGCTT+CGG | - | tig0014622:11961-11980 | None:intergenic | 45.0% |
| TATGACATACCTCCTCCCAA+TGG | + | tig0014622:11965-11984 | Msa1355250:CDS | 45.0% | |
| GCCTATTTCAGAGACCAAGT+AGG | + | tig0014622:12022-12041 | Msa1355250:intron | 45.0% | |
| ATGTTATGATTGCCGCACAC+GGG | + | tig0014622:12367-12386 | Msa1355250:CDS | 45.0% | |
| TCTCAATGAATTCCCGTGTG+CGG | - | tig0014622:12382-12401 | None:intergenic | 45.0% | |
| CGACAAATTAACTTCCCAGG+AGG | + | tig0014622:12419-12438 | Msa1355250:CDS | 45.0% | |
| TTAACTTCCCAGGAGGTGAT+TGG | + | tig0014622:12426-12445 | Msa1355250:intron | 45.0% | |
| TAACTTCCCAGGAGGTGATT+GGG | + | tig0014622:12427-12446 | Msa1355250:intron | 45.0% | |
| CCCATAAAACCAACTGAAGC+TGG | + | tig0014622:12603-12622 | Msa1355250:CDS | 45.0% | |
| GCATAAACTCCAGCTTCAGT+TGG | - | tig0014622:12615-12634 | None:intergenic | 45.0% | |
| CTTCATGTCGCTATGTGCTA+TGG | + | tig0014622:12824-12843 | Msa1355250:intron | 45.0% | |
| TGCCCACTAACGACTTTACT+TGG | + | tig0014622:13427-13446 | Msa1355250:intron | 45.0% | |
| !! | TACAGCGTTTGGCTCTTTAC+AGG | + | tig0014622:13451-13470 | Msa1355250:intron | 45.0% |
| ! | TCTAGGGCTGTTACACTTTC+AGG | + | tig0014622:13577-13596 | Msa1355250:intron | 45.0% |
| AAGCTTCACAGATGAGTCAC+TGG | + | tig0014622:13627-13646 | Msa1355250:three_prime_UTR | 45.0% | |
| TTCACAGATGAGTCACTGGT+GGG | + | tig0014622:13631-13650 | Msa1355250:three_prime_UTR | 45.0% | |
| ACGACTCACCGTGTCGAATA+AGG | - | tig0014622:11195-11214 | None:intergenic | 50.0% | |
| TTCTCGCTACCTTCTTACGG+CGG | - | tig0014622:11390-11409 | None:intergenic | 50.0% | |
| GCATAACAATAGGCACCTGC+AGG | - | tig0014622:11658-11677 | None:intergenic | 50.0% | |
| CCAAGCTGCTATGACTGGAA+TGG | - | tig0014622:11744-11763 | None:intergenic | 50.0% | |
| CCATTCCAGTCATAGCAGCT+TGG | + | tig0014622:11741-11760 | Msa1355250:CDS | 50.0% | |
| AGTTGCCAAGCTGCTATGAC+TGG | - | tig0014622:11749-11768 | None:intergenic | 50.0% | |
| AGACTTTCACCATTGGGAGG+AGG | - | tig0014622:11977-11996 | None:intergenic | 50.0% | |
| TCCTCCCAATGGTGAAAGTC+TGG | + | tig0014622:11976-11995 | Msa1355250:CDS | 50.0% | |
| TCCAGACTTTCACCATTGGG+AGG | - | tig0014622:11980-11999 | None:intergenic | 50.0% | |
| TTCAACCAGGGAAAATGGGG+TGG | - | tig0014622:12120-12139 | None:intergenic | 50.0% | |
| GAATAGCCCAATCACCTCCT+GGG | - | tig0014622:12436-12455 | None:intergenic | 50.0% | |
| TGAATAGCCCAATCACCTCC+TGG | - | tig0014622:12437-12456 | None:intergenic | 50.0% | |
| GGCTCTTTACAGGCAGAAGT+TGG | + | tig0014622:13461-13480 | Msa1355250:CDS | 50.0% | |
| CTTCACAGATGAGTCACTGG+TGG | + | tig0014622:13630-13649 | Msa1355250:three_prime_UTR | 50.0% | |
| ! | TAAGTAGCCGCTTTGGCCAG+AGG | + | tig0014622:10869-10888 | Msa1355250:CDS | 55.0% |
| TTCGACACGGTGAGTCGTTG+TGG | + | tig0014622:11197-11216 | Msa1355250:CDS | 55.0% | |
| TACCTTCTTACGGCGGTGCT+GGG | - | tig0014622:11383-11402 | None:intergenic | 55.0% | |
| GGCACCTGCAGGCAAGTTAA+TGG | - | tig0014622:11647-11666 | None:intergenic | 55.0% | |
| GGGAAAATGGGGTGGAAGTG+CGG | - | tig0014622:12112-12131 | None:intergenic | 55.0% | |
| ! | CACTTCCACCCCATTTTCCC+TGG | + | tig0014622:12112-12131 | Msa1355250:intron | 55.0% |
| GTTTGTCCGGAAGGTTGCAG+TGG | + | tig0014622:12735-12754 | Msa1355250:intron | 55.0% | |
| ! | CAAGTGCCACTGCAACCTTC+CGG | - | tig0014622:12744-12763 | None:intergenic | 55.0% |
| GTGCTGGGTCATGGCAAGCA+TGG | - | tig0014622:11368-11387 | None:intergenic | 60.0% | |
| CTACCTTCTTACGGCGGTGC+TGG | - | tig0014622:11384-11403 | None:intergenic | 60.0% | |
| CATAGCTTCGGCGCCACTCA+TGG | - | tig0014622:11949-11968 | None:intergenic | 60.0% | |
| ! | CTTACGGCGGTGCTGGGTCA+TGG | - | tig0014622:11377-11396 | None:intergenic | 65.0% |
| GACCCAGCACCGCCGTAAGA+AGG | + | tig0014622:11378-11397 | Msa1355250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014622 | gene | 10716 | 13955 | 10716 | ID=Msa1355250;Name=Msa1355250 |
| tig0014622 | mRNA | 10716 | 13955 | 10716 | ID=Msa1355250-mRNA-1;Parent=Msa1355250;Name=Msa1355250-mRNA-1;_AED=0.07;_eAED=0.07;_QI=5|1|1|1|0.85|0.75|8|373|346 |
| tig0014622 | exon | 10716 | 10997 | 10716 | ID=Msa1355250-mRNA-1:exon:9378;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 11176 | 11399 | 11176 | ID=Msa1355250-mRNA-1:exon:9379;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 11662 | 11780 | 11662 | ID=Msa1355250-mRNA-1:exon:9380;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 11883 | 12039 | 11883 | ID=Msa1355250-mRNA-1:exon:9381;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 12339 | 12440 | 12339 | ID=Msa1355250-mRNA-1:exon:9382;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 12525 | 12644 | 12525 | ID=Msa1355250-mRNA-1:exon:9383;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 13456 | 13513 | 13456 | ID=Msa1355250-mRNA-1:exon:9384;Parent=Msa1355250-mRNA-1 |
| tig0014622 | exon | 13599 | 13955 | 13599 | ID=Msa1355250-mRNA-1:exon:9385;Parent=Msa1355250-mRNA-1 |
| tig0014622 | five_prime_UTR | 10716 | 10720 | 10716 | ID=Msa1355250-mRNA-1:five_prime_utr;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 10721 | 10997 | 10721 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 11176 | 11399 | 11176 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 11662 | 11780 | 11662 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 11883 | 12039 | 11883 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 12339 | 12440 | 12339 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 12525 | 12644 | 12525 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | CDS | 13456 | 13497 | 13456 | ID=Msa1355250-mRNA-1:cds;Parent=Msa1355250-mRNA-1 |
| tig0014622 | three_prime_UTR | 13498 | 13513 | 13498 | ID=Msa1355250-mRNA-1:three_prime_utr;Parent=Msa1355250-mRNA-1 |
| tig0014622 | three_prime_UTR | 13599 | 13955 | 13599 | ID=Msa1355250-mRNA-1:three_prime_utr;Parent=Msa1355250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
