Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32251.t1 | AFK33917.1 | 86.1 | 202 | 28 | 0 | 1 | 202 | 1 | 202 | 1.50E-89 | 339.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32251.t1 | Q9SYL9 | 62.2 | 209 | 66 | 3 | 1 | 202 | 1 | 203 | 9.8e-61 | 235.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32251.t1 | I3S0X5 | 86.1 | 202 | 28 | 0 | 1 | 202 | 1 | 202 | 1.1e-89 | 339.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene32251 | 0.863334 | 2.68E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene32251 | 0.835203 | 1.92E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene32251 | 0.866189 | 3.42E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene32251 | 0.844356 | 7.95E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene32251 | 0.824048 | 9.97E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene32251 | 0.899673 | 1.57E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene32251 | 0.877274 | 7.17E-69 | -1.69E-46 |
| MS.gene04938 | MS.gene32251 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene04939 | MS.gene32251 | 0.842612 | 2.33E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene32251 | 0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene32251 | 0.876797 | 1.05E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene32251 | 0.810653 | 1.04E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene32251 | 0.835344 | 1.77E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene32251 | 0.913586 | 5.18E-84 | -1.69E-46 |
| MS.gene050165 | MS.gene32251 | 0.914999 | 9.90E-85 | -1.69E-46 |
| MS.gene050333 | MS.gene32251 | 0.929693 | 4.81E-93 | -1.69E-46 |
| MS.gene050444 | MS.gene32251 | 0.825078 | 5.70E-54 | -1.69E-46 |
| MS.gene050475 | MS.gene32251 | -0.802636 | 5.11E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene32251 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene32251 | 0.898621 | 4.43E-77 | -1.69E-46 |
| MS.gene050518 | MS.gene32251 | 0.868535 | 6.07E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene32251 | 0.832422 | 9.54E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene32251 | 0.884533 | 1.77E-71 | -1.69E-46 |
| MS.gene050675 | MS.gene32251 | 0.878083 | 3.74E-69 | -1.69E-46 |
| MS.gene050699 | MS.gene32251 | 0.883199 | 5.49E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene32251 | 0.837547 | 4.87E-57 | -1.69E-46 |
| MS.gene050876 | MS.gene32251 | 0.876708 | 1.13E-68 | -1.69E-46 |
| MS.gene05087 | MS.gene32251 | 0.86663 | 2.48E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene32251 | 0.834774 | 2.47E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene32251 | 0.882252 | 1.22E-70 | -1.69E-46 |
| MS.gene05100 | MS.gene32251 | 0.876103 | 1.82E-68 | -1.69E-46 |
| MS.gene051317 | MS.gene32251 | 0.842553 | 2.41E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene32251 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene32251 | -0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene32251 | -0.807962 | 3.91E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene32251 | 0.839645 | 1.40E-57 | -1.69E-46 |
| MS.gene051564 | MS.gene32251 | 0.811155 | 8.07E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene32251 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene32251 | 0.858091 | 1.05E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene32251 | 0.809291 | 2.04E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene32251 | 0.855598 | 5.67E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene32251 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene32251 | 0.844278 | 8.34E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene32251 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene32251 | 0.827393 | 1.60E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene32251 | 0.845881 | 3.08E-59 | -1.69E-46 |
| MS.gene052605 | MS.gene32251 | 0.800148 | 1.65E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene32251 | 0.815054 | 1.13E-51 | -1.69E-46 |
| MS.gene052670 | MS.gene32251 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene32251 | 0.831232 | 1.88E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene32251 | 0.813196 | 2.89E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene32251 | 0.804046 | 2.61E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene32251 | 0.86059 | 1.86E-63 | -1.69E-46 |
| MS.gene053284 | MS.gene32251 | 0.816015 | 6.88E-52 | -1.69E-46 |
| MS.gene053285 | MS.gene32251 | 0.810013 | 1.42E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene32251 | 0.862345 | 5.41E-64 | -1.69E-46 |
| MS.gene053420 | MS.gene32251 | -0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene32251 | 0.831031 | 2.10E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene32251 | 0.82788 | 1.23E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene32251 | 0.845439 | 4.06E-59 | -1.69E-46 |
| MS.gene054638 | MS.gene32251 | 0.802667 | 5.03E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene32251 | 0.866095 | 3.66E-65 | -1.69E-46 |
| MS.gene05470 | MS.gene32251 | 0.830405 | 2.99E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene32251 | 0.900593 | 6.27E-78 | -1.69E-46 |
| MS.gene055154 | MS.gene32251 | -0.813998 | 1.93E-51 | -1.69E-46 |
| MS.gene055333 | MS.gene32251 | -0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene32251 | 0.896243 | 4.45E-76 | -1.69E-46 |
| MS.gene055499 | MS.gene32251 | 0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene32251 | 0.880178 | 6.80E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene32251 | 0.8215 | 3.91E-53 | -1.69E-46 |
| MS.gene055634 | MS.gene32251 | 0.870879 | 1.04E-66 | -1.69E-46 |
| MS.gene055636 | MS.gene32251 | 0.847388 | 1.19E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene32251 | 0.870846 | 1.07E-66 | -1.69E-46 |
| MS.gene055647 | MS.gene32251 | 0.814182 | 1.75E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene32251 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene32251 | 0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene32251 | 0.815058 | 1.12E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene32251 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene32251 | 0.825264 | 5.15E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene32251 | 0.80036 | 1.49E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene32251 | 0.813282 | 2.77E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene32251 | 0.820472 | 6.74E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene32251 | 0.836089 | 1.15E-56 | -1.69E-46 |
| MS.gene056409 | MS.gene32251 | 0.804457 | 2.14E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene32251 | 0.817731 | 2.83E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene32251 | 0.848847 | 4.72E-60 | -1.69E-46 |
| MS.gene056504 | MS.gene32251 | 0.849567 | 2.98E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene32251 | 0.862709 | 4.18E-64 | -1.69E-46 |
| MS.gene056549 | MS.gene32251 | 0.838845 | 2.26E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene32251 | 0.888059 | 8.26E-73 | -1.69E-46 |
| MS.gene056692 | MS.gene32251 | 0.855777 | 5.02E-62 | -1.69E-46 |
| MS.gene056898 | MS.gene32251 | 0.802795 | 4.73E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene32251 | 0.807582 | 4.71E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene32251 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene32251 | 0.824916 | 6.23E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene32251 | 0.854227 | 1.42E-61 | -1.69E-46 |
| MS.gene057986 | MS.gene32251 | 0.808537 | 2.95E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene32251 | 0.8066 | 7.60E-50 | -1.69E-46 |
| MS.gene058335 | MS.gene32251 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene32251 | 0.881516 | 2.25E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene32251 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene32251 | 0.848946 | 4.43E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene32251 | 0.801738 | 7.82E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene32251 | 0.884769 | 1.45E-71 | -1.69E-46 |
| MS.gene058838 | MS.gene32251 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene32251 | 0.900422 | 7.44E-78 | -1.69E-46 |
| MS.gene059023 | MS.gene32251 | 0.836491 | 9.07E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene32251 | 0.836354 | 9.83E-57 | -1.69E-46 |
| MS.gene059079 | MS.gene32251 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene32251 | 0.845655 | 3.55E-59 | -1.69E-46 |
| MS.gene059479 | MS.gene32251 | -0.819738 | 9.92E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene32251 | 0.907332 | 5.68E-81 | -1.69E-46 |
| MS.gene059718 | MS.gene32251 | 0.874702 | 5.49E-68 | -1.69E-46 |
| MS.gene059756 | MS.gene32251 | 0.887898 | 9.52E-73 | -1.69E-46 |
| MS.gene059801 | MS.gene32251 | 0.826856 | 2.16E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene32251 | 0.83783 | 4.12E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene32251 | 0.801216 | 1.00E-48 | -1.69E-46 |
| MS.gene059960 | MS.gene32251 | 0.801871 | 7.34E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene32251 | -0.814739 | 1.32E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene32251 | 0.871894 | 4.82E-67 | -1.69E-46 |
| MS.gene060762 | MS.gene32251 | 0.862887 | 3.69E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene32251 | 0.812241 | 4.68E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene32251 | 0.871488 | 6.58E-67 | -1.69E-46 |
| MS.gene060982 | MS.gene32251 | 0.824439 | 8.07E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene32251 | 0.817086 | 3.96E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene32251 | 0.876923 | 9.49E-69 | -1.69E-46 |
| MS.gene061171 | MS.gene32251 | 0.873291 | 1.65E-67 | -1.69E-46 |
| MS.gene061200 | MS.gene32251 | 0.827005 | 1.99E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32251 | MS.gene60589 | PPI |
| MS.gene32251 | MS.gene028903 | PPI |
| MS.gene32251 | MS.gene055808 | PPI |
| MS.gene32251 | MS.gene82915 | PPI |
| MS.gene32251 | MS.gene043435 | PPI |
| MS.gene32251 | MS.gene001687 | PPI |
| MS.gene32251 | MS.gene31468 | PPI |
| MS.gene32251 | MS.gene026968 | PPI |
| MS.gene32251 | MS.gene60861 | PPI |
| MS.gene32251 | MS.gene34167 | PPI |
| MS.gene32251 | MS.gene005865 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32251.t1 | MTR_8g054450 | 96.535 | 202 | 7 | 0 | 1 | 202 | 1 | 202 | 4.27e-145 | 406 |
| MS.gene32251.t1 | MTR_8g054450 | 85.276 | 163 | 24 | 0 | 1 | 163 | 1 | 163 | 1.37e-66 | 205 |
| MS.gene32251.t1 | MTR_3g082760 | 42.268 | 97 | 56 | 0 | 104 | 200 | 26 | 122 | 1.36e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32251.t1 | AT1G78630 | 68.508 | 181 | 50 | 2 | 27 | 202 | 25 | 203 | 9.48e-82 | 246 |
| MS.gene32251.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 104 | 199 | 32 | 127 | 1.54e-15 | 72.4 |
| MS.gene32251.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 104 | 199 | 32 | 127 | 1.03e-14 | 71.2 |
| MS.gene32251.t1 | AT3G01790 | 37.500 | 96 | 60 | 0 | 104 | 199 | 32 | 127 | 1.03e-14 | 71.2 |
Find 66 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTTCAATAATTCTTTC+AGG | 0.233109 | 8.3:+48389723 | None:intergenic |
| ATCTTCTTCGACTTCGACTA+TGG | 0.277557 | 8.3:+48391916 | None:intergenic |
| TTGACATGATCCGAAGCTTT+TGG | 0.279177 | 8.3:+48391266 | None:intergenic |
| AGTGCCGCCGATAAAGCTTC+TGG | 0.285755 | 8.3:+48389802 | None:intergenic |
| GATGCTACAGATAAAATTCT+TGG | 0.293196 | 8.3:-48391218 | MS.gene32251:CDS |
| GTTGAACTTACCCTCCCTTT+TGG | 0.329004 | 8.3:+48389684 | None:intergenic |
| GAACCTGAGCCCCGCTTTCA+AGG | 0.332396 | 8.3:-48391875 | MS.gene32251:CDS |
| AGTAATGATTGCAGGACATT+TGG | 0.339663 | 8.3:-48391304 | MS.gene32251:intron |
| TAGCATTGATGAGGGGTATA+AGG | 0.339930 | 8.3:+48388801 | None:intergenic |
| CAGGAATTCTGTTCTGCAGC+TGG | 0.358647 | 8.3:+48389742 | None:intergenic |
| AGAGGACCCAGAAGCTTTAT+CGG | 0.394368 | 8.3:-48389809 | MS.gene32251:CDS |
| TGGTAATTGAGAAGCAAGAA+AGG | 0.434624 | 8.3:+48392012 | None:intergenic |
| GCAGAAAACAATTGTGAAGA+TGG | 0.447380 | 8.3:+48388665 | None:intergenic |
| GGGCCTTGAAAGCGGGGCTC+AGG | 0.450923 | 8.3:+48391872 | None:intergenic |
| GATATTCTACTTGAATTGAC+AGG | 0.464228 | 8.3:+48388574 | None:intergenic |
| TTATACCGGGCCTTGAAAGC+GGG | 0.474696 | 8.3:+48391865 | None:intergenic |
| ATTATTGAACATGCTGTTCG+TGG | 0.477565 | 8.3:-48389714 | MS.gene32251:CDS |
| GTTCGTGGCATGCTTCCAAA+AGG | 0.478146 | 8.3:-48389699 | MS.gene32251:CDS |
| TGTGTAGATAAATGCAGAAA+AGG | 0.481327 | 8.3:-48389850 | MS.gene32251:intron |
| GTGCCGCCGATAAAGCTTCT+GGG | 0.487074 | 8.3:+48389803 | None:intergenic |
| CAACCACTACCGGCTTACTC+TGG | 0.489770 | 8.3:-48388597 | MS.gene32251:CDS |
| GAGTAAGCCGGTAGTGGTTG+CGG | 0.489797 | 8.3:+48388600 | None:intergenic |
| TTTCATTGTGCATTCTCAGC+AGG | 0.490189 | 8.3:-48391945 | MS.gene32251:CDS |
| TTCTTCATTCTCCTCTGCAA+CGG | 0.496597 | 8.3:-48388642 | MS.gene32251:CDS |
| AGGACATTTGGAACACAACC+TGG | 0.498468 | 8.3:-48391292 | MS.gene32251:CDS |
| CGGCGGCACTCAGGTCGACC+TGG | 0.501166 | 8.3:-48389789 | MS.gene32251:CDS |
| TGAGCCCCGCTTTCAAGGCC+CGG | 0.505387 | 8.3:-48391870 | MS.gene32251:intron |
| TGAGAGAATGAAGAAGATGA+AGG | 0.506757 | 8.3:+48392061 | None:intergenic |
| CAGAAAACAATTGTGAAGAT+GGG | 0.519935 | 8.3:+48388666 | None:intergenic |
| GAGTATTCCGCAACCACTAC+CGG | 0.525195 | 8.3:-48388607 | MS.gene32251:CDS |
| AAGCTTTATCGGCGGCACTC+AGG | 0.528770 | 8.3:-48389798 | MS.gene32251:CDS |
| TTATACCCCTCATCAATGCT+AGG | 0.532665 | 8.3:-48388799 | MS.gene32251:intron |
| GATAATGAAAGGTTTGAAAG+TGG | 0.541301 | 8.3:+48391992 | None:intergenic |
| AACCTGGTATCCAAAAGCTT+CGG | 0.541687 | 8.3:-48391276 | MS.gene32251:CDS |
| CATGGGTGCATTTGTAATTG+TGG | 0.546463 | 8.3:-48391126 | MS.gene32251:intron |
| GAAGAGTGAAGACGGAGCAG+AGG | 0.547229 | 8.3:+48388834 | None:intergenic |
| GCAGAAAAGGTTGCTGTCAG+TGG | 0.548150 | 8.3:-48389837 | MS.gene32251:CDS |
| AGGCCAGAGTAAGCCGGTAG+TGG | 0.552439 | 8.3:+48388594 | None:intergenic |
| TTGAAGAAGATGATAATGAA+AGG | 0.554980 | 8.3:+48391981 | None:intergenic |
| GAGAGAATGAAGAAGATGAA+GGG | 0.556314 | 8.3:+48392062 | None:intergenic |
| CAGAAAAGGTTGCTGTCAGT+GGG | 0.568241 | 8.3:-48389836 | MS.gene32251:CDS |
| AAAGTCAAGAAGAGTGAAGA+CGG | 0.580573 | 8.3:+48388826 | None:intergenic |
| AATGCACCCATGTCCACACT+AGG | 0.592790 | 8.3:+48391137 | None:intergenic |
| AGAAAACAATTGTGAAGATG+GGG | 0.593346 | 8.3:+48388667 | None:intergenic |
| GATGAAGGGAACGTCACTGA+TGG | 0.593477 | 8.3:+48392076 | None:intergenic |
| TTCGTGGCATGCTTCCAAAA+GGG | 0.595250 | 8.3:-48389698 | MS.gene32251:CDS |
| GTTATACCGGGCCTTGAAAG+CGG | 0.599322 | 8.3:+48391864 | None:intergenic |
| ATTGACAGGCCAGAGTAAGC+CGG | 0.607426 | 8.3:+48388588 | None:intergenic |
| GTCTCGACTGTCATACCACC+AGG | 0.617174 | 8.3:+48389771 | None:intergenic |
| TATACCGGGCCTTGAAAGCG+GGG | 0.621350 | 8.3:+48391866 | None:intergenic |
| TGAGAATGCACAATGAAAGA+TGG | 0.621519 | 8.3:+48391950 | None:intergenic |
| TGATGGTGAACCACACAGCA+AGG | 0.624881 | 8.3:+48392093 | None:intergenic |
| GTGGCATGCTTCCAAAAGGG+AGG | 0.631240 | 8.3:-48389695 | MS.gene32251:CDS |
| AGTGACTTATACACCTAGTG+TGG | 0.636274 | 8.3:-48391150 | MS.gene32251:CDS |
| GCACGTTAAATCCGTTGCAG+AGG | 0.641355 | 8.3:+48388631 | None:intergenic |
| TGGCATGCTTCCAAAAGGGA+GGG | 0.645169 | 8.3:-48389694 | MS.gene32251:intron |
| TTATACACCTAGTGTGGACA+TGG | 0.648097 | 8.3:-48391144 | MS.gene32251:CDS |
| ACAATTGCTAATCACATCCG+AGG | 0.652669 | 8.3:-48391182 | MS.gene32251:CDS |
| TTTAACCTAGCATTGATGAG+GGG | 0.666796 | 8.3:+48388794 | None:intergenic |
| GAAAACAATTGTGAAGATGG+GGG | 0.686210 | 8.3:+48388668 | None:intergenic |
| ATGTCAATACAGCGAAAACG+TGG | 0.689193 | 8.3:-48391250 | MS.gene32251:CDS |
| CGGCACTCAGGTCGACCTGG+TGG | 0.696042 | 8.3:-48389786 | MS.gene32251:CDS |
| GGACCCAGAAGCTTTATCGG+CGG | 0.709633 | 8.3:-48389806 | MS.gene32251:CDS |
| TATACACCTAGTGTGGACAT+GGG | 0.714930 | 8.3:-48391143 | MS.gene32251:CDS |
| GCAACAATGTCCTTGCTGTG+TGG | 0.747954 | 8.3:-48392103 | None:intergenic |
| GGTTCAACACAGATGAAACG+AGG | 0.749686 | 8.3:+48391893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTATTATAATTTTA+TGG | - | chr8.3:48389024-48389043 | MS.gene32251:intron | 0.0% |
| !!! | TATTTTATTTGTAAAAAAGA+CGG | - | chr8.3:48389932-48389951 | MS.gene32251:intron | 10.0% |
| !! | AAAAACTAAAATATCAATAG+AGG | - | chr8.3:48390632-48390651 | MS.gene32251:intron | 15.0% |
| !! | ATAATTGAAGTAAATAAACA+TGG | + | chr8.3:48389139-48389158 | None:intergenic | 15.0% |
| !! | TATTACAAGAAAAAAGAATA+AGG | + | chr8.3:48390101-48390120 | None:intergenic | 15.0% |
| !! | TTTAAAAATAATACAAGACA+TGG | + | chr8.3:48389292-48389311 | None:intergenic | 15.0% |
| !!! | AATTTTCTTTTGGTTTAAAA+TGG | - | chr8.3:48389697-48389716 | MS.gene32251:CDS | 15.0% |
| !!! | TATTTTTAAAGCTTTTAACT+TGG | - | chr8.3:48389302-48389321 | MS.gene32251:intron | 15.0% |
| !! | AAAAACTGAAAGGAAAAAAT+TGG | + | chr8.3:48389217-48389236 | None:intergenic | 20.0% |
| !! | AAACAAAATCTCCTATAAAA+TGG | - | chr8.3:48390655-48390674 | MS.gene32251:intron | 20.0% |
| !! | AAGATATTGGAATTAAATAG+AGG | + | chr8.3:48390174-48390193 | None:intergenic | 20.0% |
| !! | ACTAATCAAATAAGAAATGT+AGG | + | chr8.3:48389163-48389182 | None:intergenic | 20.0% |
| !!! | ATGATTTTGTTGAAATTTTC+TGG | - | chr8.3:48388897-48388916 | MS.gene32251:intron | 20.0% |
| !!! | ATTGCTTTAAATTTTTATGC+CGG | - | chr8.3:48389263-48389282 | MS.gene32251:intron | 20.0% |
| !!! | ATTTTCTGGTATTAATTTTC+TGG | - | chr8.3:48388911-48388930 | MS.gene32251:intron | 20.0% |
| !!! | CTTTCTTGTTAATTTTCTTT+TGG | - | chr8.3:48389687-48389706 | MS.gene32251:intron | 20.0% |
| !!! | TCCTTTCAGTTTTTATTTTT+TGG | - | chr8.3:48389223-48389242 | MS.gene32251:intron | 20.0% |
| !!! | TGCTAGGTTAAAATTATTTT+TGG | - | chr8.3:48391894-48391913 | MS.gene32251:CDS | 20.0% |
| !!! | TTTGATTAGTTTAATTAGCT+TGG | - | chr8.3:48389173-48389192 | MS.gene32251:intron | 20.0% |
| !!! | TTTTCTGGTATTAATTTTCT+GGG | - | chr8.3:48388912-48388931 | MS.gene32251:intron | 20.0% |
| ! | AAACCAGAAAGAAGATAATA+AGG | + | chr8.3:48389058-48389077 | None:intergenic | 25.0% |
| ! | AATCTATAGAATGTAGAAAG+CGG | + | chr8.3:48390504-48390523 | None:intergenic | 25.0% |
| ! | AATGATGATAGCAATTTGAA+GGG | + | chr8.3:48389898-48389917 | None:intergenic | 25.0% |
| ! | ATATAGAAGTGAAGAATGAA+AGG | - | chr8.3:48391172-48391191 | MS.gene32251:CDS | 25.0% |
| ! | ATGTGACATTATTATAGCAA+AGG | + | chr8.3:48390263-48390282 | None:intergenic | 25.0% |
| ! | CACAATAAAGATGCAAAAAA+TGG | + | chr8.3:48391628-48391647 | None:intergenic | 25.0% |
| ! | CATTAATGACTATGTTTATG+AGG | - | chr8.3:48390706-48390725 | MS.gene32251:intron | 25.0% |
| ! | CCTGTTATAAATAAGAAAAC+GGG | + | chr8.3:48390078-48390097 | None:intergenic | 25.0% |
| ! | GCCAAAAAATAAAAACTGAA+AGG | + | chr8.3:48389227-48389246 | None:intergenic | 25.0% |
| ! | GCCTGTTATAAATAAGAAAA+CGG | + | chr8.3:48390079-48390098 | None:intergenic | 25.0% |
| ! | TCGAATTAATGTATTTGAAG+CGG | - | chr8.3:48389337-48389356 | MS.gene32251:intron | 25.0% |
| ! | TCTACATTCTATAGATTGTA+AGG | - | chr8.3:48390507-48390526 | MS.gene32251:intron | 25.0% |
| ! | TGTGACATTATTATAGCAAA+GGG | + | chr8.3:48390262-48390281 | None:intergenic | 25.0% |
| ! | TTGATCTTGTTACAGATTAT+TGG | - | chr8.3:48391978-48391997 | MS.gene32251:CDS | 25.0% |
| !! | AATCATTACTCTTTTCAGTT+AGG | + | chr8.3:48389363-48389382 | None:intergenic | 25.0% |
| !! | TAATTAGCTTGGAAATGTAT+AGG | - | chr8.3:48389184-48389203 | MS.gene32251:intron | 25.0% |
| !! | TTGAAGAAGATGATAATGAA+AGG | + | chr8.3:48388699-48388718 | None:intergenic | 25.0% |
| !!! | AAACAATACAGCCATTTTAT+AGG | + | chr8.3:48390669-48390688 | None:intergenic | 25.0% |
| !!! | AAGTCACTAAATTTTTTCCT+CGG | + | chr8.3:48389515-48389534 | None:intergenic | 25.0% |
| !!! | ACCAAAGAAGTTTTTTGAAA+CGG | - | chr8.3:48389784-48389803 | MS.gene32251:CDS | 25.0% |
| !!! | CATGTTTTTTCGATCATAAT+GGG | - | chr8.3:48390426-48390445 | MS.gene32251:intron | 25.0% |
| !!! | CTCTCTCTTTTTTTGTTAAT+GGG | - | chr8.3:48388840-48388859 | MS.gene32251:CDS | 25.0% |
| !!! | TCATGTTTTTTCGATCATAA+TGG | - | chr8.3:48390425-48390444 | MS.gene32251:intron | 25.0% |
| !!! | TCTCTCTCTTTTTTTGTTAA+TGG | - | chr8.3:48388839-48388858 | MS.gene32251:CDS | 25.0% |
| !!! | TTCTTTTGGTTTAAAATGGA+TGG | - | chr8.3:48389701-48389720 | MS.gene32251:CDS | 25.0% |
| !!! | TTTTCCATTGTTATTACTTC+CGG | - | chr8.3:48391754-48391773 | MS.gene32251:intron | 25.0% |
| AAAGTCGAAGTTGTGATAAT+TGG | + | chr8.3:48391500-48391519 | None:intergenic | 30.0% | |
| AAATAAGAAAACGGGTAAAG+TGG | + | chr8.3:48390070-48390089 | None:intergenic | 30.0% | |
| AACAATGGAAAAGGAGAAAT+GGG | + | chr8.3:48391746-48391765 | None:intergenic | 30.0% | |
| AAGTCGAAGTTGTGATAATT+GGG | + | chr8.3:48391499-48391518 | None:intergenic | 30.0% | |
| ACAACCCCAGTTAAAATAAT+AGG | + | chr8.3:48390810-48390829 | None:intergenic | 30.0% | |
| AGAAAACAATTGTGAAGATG+GGG | + | chr8.3:48392013-48392032 | None:intergenic | 30.0% | |
| AGATTCATTTCCATAACTGA+TGG | - | chr8.3:48391145-48391164 | MS.gene32251:CDS | 30.0% | |
| AGCAAGACAAATCACAAATT+TGG | + | chr8.3:48391921-48391940 | None:intergenic | 30.0% | |
| AGCATAAAACTTCATGAGAA+GGG | + | chr8.3:48390736-48390755 | None:intergenic | 30.0% | |
| ATAATACAAGACATGGATAC+CGG | + | chr8.3:48389285-48389304 | None:intergenic | 30.0% | |
| ATCATCATTCTGATAGAAAC+TGG | - | chr8.3:48389909-48389928 | MS.gene32251:intron | 30.0% | |
| CAATTACGAGAAATGAATAC+TGG | + | chr8.3:48389096-48389115 | None:intergenic | 30.0% | |
| CAGAAAACAATTGTGAAGAT+GGG | + | chr8.3:48392014-48392033 | None:intergenic | 30.0% | |
| CTATATTCTTCCATCAGTTA+TGG | + | chr8.3:48391158-48391177 | None:intergenic | 30.0% | |
| CTGCATTAATCATTTGCAAT+TGG | - | chr8.3:48389583-48389602 | MS.gene32251:intron | 30.0% | |
| GAATGATGATAGCAATTTGA+AGG | + | chr8.3:48389899-48389918 | None:intergenic | 30.0% | |
| GATAATGAAAGGTTTGAAAG+TGG | + | chr8.3:48388688-48388707 | None:intergenic | 30.0% | |
| GATGCTACAGATAAAATTCT+TGG | - | chr8.3:48389459-48389478 | MS.gene32251:intron | 30.0% | |
| GCATGTTCAATAATTCTTTC+AGG | + | chr8.3:48390957-48390976 | None:intergenic | 30.0% | |
| GGAACTTATGCAATATATGA+TGG | - | chr8.3:48389722-48389741 | MS.gene32251:CDS | 30.0% | |
| GGAAGTAATAACAATGGAAA+AGG | + | chr8.3:48391755-48391774 | None:intergenic | 30.0% | |
| GTCACATTGACAAAGAAATT+TGG | - | chr8.3:48390276-48390295 | MS.gene32251:intron | 30.0% | |
| TAACAATGGAAAAGGAGAAA+TGG | + | chr8.3:48391747-48391766 | None:intergenic | 30.0% | |
| TAGCATAAAACTTCATGAGA+AGG | + | chr8.3:48390737-48390756 | None:intergenic | 30.0% | |
| TCCGTTTCAAAAAACTTCTT+TGG | + | chr8.3:48389788-48389807 | None:intergenic | 30.0% | |
| TGTGTAGATAAATGCAGAAA+AGG | - | chr8.3:48390827-48390846 | MS.gene32251:intron | 30.0% | |
| ! | ATTTGTGATTTGTCTTGCTT+TGG | - | chr8.3:48391922-48391941 | MS.gene32251:CDS | 30.0% |
| ! | GGACTGTTTTGTAAATTAGA+AGG | - | chr8.3:48389743-48389762 | MS.gene32251:CDS | 30.0% |
| ! | TGAGACTTTTCTATTCCATA+TGG | + | chr8.3:48388951-48388970 | None:intergenic | 30.0% |
| !! | AAGCCTTATTATCTTCTTTC+TGG | - | chr8.3:48389052-48389071 | MS.gene32251:intron | 30.0% |
| !! | ATTTTAGCCTTTCCTTTTTG+CGG | - | chr8.3:48389833-48389852 | MS.gene32251:CDS | 30.0% |
| !! | CACTAAGAGTACTAGTATTT+AGG | + | chr8.3:48390215-48390234 | None:intergenic | 30.0% |
| !! | CCCGTTTTCTTATTTATAAC+AGG | - | chr8.3:48390075-48390094 | MS.gene32251:intron | 30.0% |
| !! | GAAATTTTGAATAAGTGCTG+AGG | + | chr8.3:48390028-48390047 | None:intergenic | 30.0% |
| !! | TTCTCATGAAGTTTTATGCT+AGG | - | chr8.3:48390736-48390755 | MS.gene32251:intron | 30.0% |
| !!! | ATTTTAACCTAGCATTGATG+AGG | + | chr8.3:48391888-48391907 | None:intergenic | 30.0% |
| !!! | CATGTAAGTGCTGTTTTTTA+TGG | - | chr8.3:48389606-48389625 | MS.gene32251:intron | 30.0% |
| !!! | CTTGGCCTATTATTTTAACT+GGG | - | chr8.3:48390802-48390821 | MS.gene32251:intron | 30.0% |
| !!! | GTTTTTTGAAACGGACATAT+AGG | - | chr8.3:48389793-48389812 | MS.gene32251:CDS | 30.0% |
| !!! | TACACGTTTTTGGTTTGAAA+GGG | - | chr8.3:48391224-48391243 | MS.gene32251:CDS | 30.0% |
| !!! | TCTTGGCCTATTATTTTAAC+TGG | - | chr8.3:48390801-48390820 | MS.gene32251:intron | 30.0% |
| !!! | TTGGCCTATTATTTTAACTG+GGG | - | chr8.3:48390803-48390822 | MS.gene32251:intron | 30.0% |
| !!! | TTTTAACCTAGCATTGATGA+GGG | + | chr8.3:48391887-48391906 | None:intergenic | 30.0% |
| AAAGTAGACTTTGTCTTCAC+CGG | - | chr8.3:48391289-48391308 | MS.gene32251:CDS | 35.0% | |
| AAAGTCAAGAAGAGTGAAGA+CGG | + | chr8.3:48391854-48391873 | None:intergenic | 35.0% | |
| AAGAGAGAGAGAAGTTATAC+CGG | + | chr8.3:48388829-48388848 | None:intergenic | 35.0% | |
| AGAGAAGAAATCTGATGACA+AGG | + | chr8.3:48391956-48391975 | None:intergenic | 35.0% | |
| AGTAATGATTGCAGGACATT+TGG | - | chr8.3:48389373-48389392 | MS.gene32251:intron | 35.0% | |
| ATACTAGTACTCTTAGTGAG+TGG | - | chr8.3:48390217-48390236 | MS.gene32251:intron | 35.0% | |
| ATTATTGAACATGCTGTTCG+TGG | - | chr8.3:48390963-48390982 | MS.gene32251:intron | 35.0% | |
| CACCGTTATTCATTATGTGA+CGG | + | chr8.3:48391457-48391476 | None:intergenic | 35.0% | |
| CTCCGTCACATAATGAATAA+CGG | - | chr8.3:48391452-48391471 | MS.gene32251:intron | 35.0% | |
| CTGAAAAGAGTAATGATTGC+AGG | - | chr8.3:48389365-48389384 | MS.gene32251:intron | 35.0% | |
| GAAAACAATTGTGAAGATGG+GGG | + | chr8.3:48392012-48392031 | None:intergenic | 35.0% | |
| GAAGAGTGGTAAGAAGATAT+TGG | + | chr8.3:48390187-48390206 | None:intergenic | 35.0% | |
| GACAGTTAACAACTGTACAA+TGG | + | chr8.3:48390130-48390149 | None:intergenic | 35.0% | |
| GAGAGAATGAAGAAGATGAA+GGG | + | chr8.3:48388618-48388637 | None:intergenic | 35.0% | |
| GAGTACTAGTATTTAGGAAG+AGG | + | chr8.3:48390209-48390228 | None:intergenic | 35.0% | |
| GCAGAAAACAATTGTGAAGA+TGG | + | chr8.3:48392015-48392034 | None:intergenic | 35.0% | |
| GGCATGTATGACTAATGATT+TGG | - | chr8.3:48390571-48390590 | MS.gene32251:intron | 35.0% | |
| GTACAGTAGACATGTTAAGA+TGG | - | chr8.3:48391043-48391062 | MS.gene32251:intron | 35.0% | |
| GTTAACAACTGTACAATGGA+TGG | + | chr8.3:48390126-48390145 | None:intergenic | 35.0% | |
| TAACTATCGAGGAAGGAATA+TGG | + | chr8.3:48391540-48391559 | None:intergenic | 35.0% | |
| TATCACAACTTCGACTTTGA+AGG | - | chr8.3:48391502-48391521 | MS.gene32251:intron | 35.0% | |
| TGAAGACAAAGTCTACTTTC+AGG | + | chr8.3:48391288-48391307 | None:intergenic | 35.0% | |
| TGAGAATGCACAATGAAAGA+TGG | + | chr8.3:48388730-48388749 | None:intergenic | 35.0% | |
| TGAGAGAATGAAGAAGATGA+AGG | + | chr8.3:48388619-48388638 | None:intergenic | 35.0% | |
| TGGTAATTGAGAAGCAAGAA+AGG | + | chr8.3:48388668-48388687 | None:intergenic | 35.0% | |
| TTCTTCTATTGCATTCAGGT+TGG | - | chr8.3:48391685-48391704 | MS.gene32251:intron | 35.0% | |
| TTGGAATTAAATAGAGGAGC+AGG | + | chr8.3:48390168-48390187 | None:intergenic | 35.0% | |
| ! | AGATGGAGAAAACAACCTTT+TGG | + | chr8.3:48391803-48391822 | None:intergenic | 35.0% |
| ! | GTTATTCATTATGTGACGGA+GGG | + | chr8.3:48391453-48391472 | None:intergenic | 35.0% |
| !! | ATAGAAAGGTTGATGTCGAA+AGG | + | chr8.3:48391423-48391442 | None:intergenic | 35.0% |
| !! | TTTAACCTAGCATTGATGAG+GGG | + | chr8.3:48391886-48391905 | None:intergenic | 35.0% |
| !!! | AGTACACCTTTTGGTTTGAA+AGG | - | chr8.3:48391258-48391277 | MS.gene32251:CDS | 35.0% |
| !!! | GTACACCTTTTGGTTTGAAA+GGG | - | chr8.3:48391259-48391278 | MS.gene32251:CDS | 35.0% |
| !!! | GTACACGTTTTTGGTTTGAA+AGG | - | chr8.3:48391223-48391242 | MS.gene32251:CDS | 35.0% |
| AACCAAAAACGTGTACTCTC+AGG | + | chr8.3:48391219-48391238 | None:intergenic | 40.0% | |
| AACCTGGTATCCAAAAGCTT+CGG | - | chr8.3:48389401-48389420 | MS.gene32251:intron | 40.0% | |
| AAGTTGTGATAATTGGGTCG+TGG | + | chr8.3:48391493-48391512 | None:intergenic | 40.0% | |
| AATGGAAAAGGAGAAATGGG+AGG | + | chr8.3:48391743-48391762 | None:intergenic | 40.0% | |
| ACAATTGCTAATCACATCCG+AGG | - | chr8.3:48389495-48389514 | MS.gene32251:intron | 40.0% | |
| ACCTGATGGTTTCAGACTTT+CGG | - | chr8.3:48391576-48391595 | MS.gene32251:intron | 40.0% | |
| ACTACCAAGCTTGAATCTAG+TGG | - | chr8.3:48391328-48391347 | MS.gene32251:intron | 40.0% | |
| ACTAGATTCAAGCTTGGTAG+TGG | + | chr8.3:48391329-48391348 | None:intergenic | 40.0% | |
| AGAGAGAGAGAAGTTATACC+GGG | + | chr8.3:48388828-48388847 | None:intergenic | 40.0% | |
| AGAGGAGCAGGTATAAAAAC+AGG | + | chr8.3:48390156-48390175 | None:intergenic | 40.0% | |
| AGTGACTTATACACCTAGTG+TGG | - | chr8.3:48389527-48389546 | MS.gene32251:intron | 40.0% | |
| AGTGCTCTAACTTCCCAAAT+AGG | + | chr8.3:48389966-48389985 | None:intergenic | 40.0% | |
| ATCTTCTTCGACTTCGACTA+TGG | + | chr8.3:48388764-48388783 | None:intergenic | 40.0% | |
| ATGTCAATACAGCGAAAACG+TGG | - | chr8.3:48389427-48389446 | MS.gene32251:intron | 40.0% | |
| CATGGGTGCATTTGTAATTG+TGG | - | chr8.3:48389551-48389570 | MS.gene32251:intron | 40.0% | |
| CGTTATTCATTATGTGACGG+AGG | + | chr8.3:48391454-48391473 | None:intergenic | 40.0% | |
| CTACCAAGCTTGAATCTAGT+GGG | - | chr8.3:48391329-48391348 | MS.gene32251:intron | 40.0% | |
| GAAGAAATCTGATGACAAGG+TGG | + | chr8.3:48391953-48391972 | None:intergenic | 40.0% | |
| GAAGCCGGAAGTAATAACAA+TGG | + | chr8.3:48391761-48391780 | None:intergenic | 40.0% | |
| GAGGAGCAGGTATAAAAACA+GGG | + | chr8.3:48390155-48390174 | None:intergenic | 40.0% | |
| GGTCTCTGTAATCTACCATA+TGG | - | chr8.3:48388933-48388952 | MS.gene32251:intron | 40.0% | |
| GTATTTAGGAAGAGGAAGAG+TGG | + | chr8.3:48390201-48390220 | None:intergenic | 40.0% | |
| GTGCTCTAACTTCCCAAATA+GGG | + | chr8.3:48389965-48389984 | None:intergenic | 40.0% | |
| TAGATGCAAGGTAACTATCG+AGG | + | chr8.3:48391551-48391570 | None:intergenic | 40.0% | |
| TATACACCTAGTGTGGACAT+GGG | - | chr8.3:48389534-48389553 | MS.gene32251:intron | 40.0% | |
| TGAATGGATGGGTCTTAAGA+AGG | + | chr8.3:48391381-48391400 | None:intergenic | 40.0% | |
| TGACTTACCGCAAAAAGGAA+AGG | + | chr8.3:48389843-48389862 | None:intergenic | 40.0% | |
| TGTCTACTGTACAAGTCTCT+TGG | + | chr8.3:48391035-48391054 | None:intergenic | 40.0% | |
| TTATACACCTAGTGTGGACA+TGG | - | chr8.3:48389533-48389552 | MS.gene32251:intron | 40.0% | |
| TTATACCCCTCATCAATGCT+AGG | - | chr8.3:48391878-48391897 | MS.gene32251:CDS | 40.0% | |
| TTCTTCATTCTCCTCTGCAA+CGG | - | chr8.3:48392035-48392054 | MS.gene32251:CDS | 40.0% | |
| TTTCATTGTGCATTCTCAGC+AGG | - | chr8.3:48388732-48388751 | MS.gene32251:intron | 40.0% | |
| ! | ACCAAAAGGTGTACTCTCTA+AGG | + | chr8.3:48391253-48391272 | None:intergenic | 40.0% |
| ! | CCAAAAGGTGTACTCTCTAA+GGG | + | chr8.3:48391252-48391271 | None:intergenic | 40.0% |
| ! | GTTTTCTCCATCTTGACAGT+GGG | - | chr8.3:48391810-48391829 | MS.gene32251:intron | 40.0% |
| ! | TCGACTTTGAAGGTATGAGA+CGG | - | chr8.3:48391512-48391531 | MS.gene32251:intron | 40.0% |
| ! | TGGAGAAAACAACCTTTTGG+TGG | + | chr8.3:48391800-48391819 | None:intergenic | 40.0% |
| ! | TGTTTTCTCCATCTTGACAG+TGG | - | chr8.3:48391809-48391828 | MS.gene32251:intron | 40.0% |
| ! | TTGACATGATCCGAAGCTTT+TGG | + | chr8.3:48389414-48389433 | None:intergenic | 40.0% |
| !! | AAGGTTGATGTCGAAAGGTT+TGG | + | chr8.3:48391418-48391437 | None:intergenic | 40.0% |
| !! | ACGATTGCTTTCTGAAGTCT+TGG | - | chr8.3:48390784-48390803 | MS.gene32251:intron | 40.0% |
| !! | AGAGCACTGCAAAACATCAA+GGG | - | chr8.3:48389978-48389997 | MS.gene32251:intron | 40.0% |
| !! | ATTCAAGCTTGGTAGTGGAA+AGG | + | chr8.3:48391324-48391343 | None:intergenic | 40.0% |
| !! | GAATCTAGTGGGTTGAATAG+TGG | - | chr8.3:48391340-48391359 | MS.gene32251:intron | 40.0% |
| !! | TAGAGCACTGCAAAACATCA+AGG | - | chr8.3:48389977-48389996 | MS.gene32251:intron | 40.0% |
| !! | TAGCATTGATGAGGGGTATA+AGG | + | chr8.3:48391879-48391898 | None:intergenic | 40.0% |
| ACCATATCTTGGCCACCAAA+AGG | - | chr8.3:48391785-48391804 | MS.gene32251:intron | 45.0% | |
| AGACGGAGATAAGCCCTATT+TGG | - | chr8.3:48389949-48389968 | MS.gene32251:intron | 45.0% | |
| CAACCCACTAGATTCAAGCT+TGG | + | chr8.3:48391335-48391354 | None:intergenic | 45.0% | |
| CAGAAAAGGTTGCTGTCAGT+GGG | - | chr8.3:48390841-48390860 | MS.gene32251:intron | 45.0% | |
| CATGGTGACTTACCGCAAAA+AGG | + | chr8.3:48389848-48389867 | None:intergenic | 45.0% | |
| CGACAACAAGGTGAATGGAT+GGG | + | chr8.3:48391392-48391411 | None:intergenic | 45.0% | |
| GAATGCAATAGAAGAACCGC+CGG | + | chr8.3:48391681-48391700 | None:intergenic | 45.0% | |
| GACGGAGATAAGCCCTATTT+GGG | - | chr8.3:48389950-48389969 | MS.gene32251:intron | 45.0% | |
| GCGGTTCTTCTATTGCATTC+AGG | - | chr8.3:48391681-48391700 | MS.gene32251:intron | 45.0% | |
| GGCATCCCTTTCAAACCAAA+AGG | + | chr8.3:48391267-48391286 | None:intergenic | 45.0% | |
| GGTTCAACACAGATGAAACG+AGG | + | chr8.3:48388787-48388806 | None:intergenic | 45.0% | |
| TGATGGTTTCAGACTTTCGG+TGG | - | chr8.3:48391579-48391598 | MS.gene32251:intron | 45.0% | |
| TGCAAGGTAACTATCGAGGA+AGG | + | chr8.3:48391547-48391566 | None:intergenic | 45.0% | |
| TGCGGTAAGTCACCATGAAA+TGG | - | chr8.3:48389851-48389870 | MS.gene32251:intron | 45.0% | |
| TTCGTGGCATGCTTCCAAAA+GGG | - | chr8.3:48390979-48390998 | MS.gene32251:intron | 45.0% | |
| TTGCTGTCAGTGGGAAAAAG+AGG | - | chr8.3:48390850-48390869 | MS.gene32251:intron | 45.0% | |
| ! | ACCGAAAGTCTGAAACCATC+AGG | + | chr8.3:48391580-48391599 | None:intergenic | 45.0% |
| ! | AGAGGACCCAGAAGCTTTAT+CGG | - | chr8.3:48390868-48390887 | MS.gene32251:intron | 45.0% |
| ! | AGGACATTTGGAACACAACC+TGG | - | chr8.3:48389385-48389404 | MS.gene32251:intron | 45.0% |
| ! | ATCCGAAGCTTTTGGATACC+AGG | + | chr8.3:48389406-48389425 | None:intergenic | 45.0% |
| ! | CCATCCATTCACCTTGTTGT+CGG | - | chr8.3:48391390-48391409 | MS.gene32251:intron | 45.0% |
| ! | GAAAGTCTGAAACCATCAGG+TGG | + | chr8.3:48391577-48391596 | None:intergenic | 45.0% |
| ! | GTTGAACTTACCCTCCCTTT+TGG | + | chr8.3:48390996-48391015 | None:intergenic | 45.0% |
| !! | AAGCTTGGTAGTGGAAAGGA+AGG | + | chr8.3:48391320-48391339 | None:intergenic | 45.0% |
| !! | ACCTTTTGGTGGCCAAGATA+TGG | + | chr8.3:48391789-48391808 | None:intergenic | 45.0% |
| !! | AGCTTGGTAGTGGAAAGGAA+GGG | + | chr8.3:48391319-48391338 | None:intergenic | 45.0% |
| !! | CCCTTAGAGAGTACACCTTT+TGG | - | chr8.3:48391249-48391268 | MS.gene32251:CDS | 45.0% |
| !! | GAATAAGTGCTGAGGCCTTT+GGG | + | chr8.3:48390020-48390039 | None:intergenic | 45.0% |
| !! | TCTAGTGGGTTGAATAGTGG+TGG | - | chr8.3:48391343-48391362 | MS.gene32251:intron | 45.0% |
| !! | TGAATAAGTGCTGAGGCCTT+TGG | + | chr8.3:48390021-48390040 | None:intergenic | 45.0% |
| !! | TGCCTGAGAGTACACGTTTT+TGG | - | chr8.3:48391214-48391233 | MS.gene32251:CDS | 45.0% |
| !! | ATAATAAAATTTAAAAATGA+TGG | + | chr8.3:48389017-48389036 | None:intergenic | 5.0% |
| !!! | TGATTTTAAATTTTAATTAT+AGG | - | chr8.3:48390550-48390569 | MS.gene32251:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | + | chr8.3:48390614-48390633 | None:intergenic | 5.0% |
| AATGCACCCATGTCCACACT+AGG | + | chr8.3:48389543-48389562 | None:intergenic | 50.0% | |
| AGTGCAACCCACTGTCAAGA+TGG | + | chr8.3:48391820-48391839 | None:intergenic | 50.0% | |
| AGTGGAAAGGAAGGGAACAC+CGG | + | chr8.3:48391311-48391330 | None:intergenic | 50.0% | |
| ATGCGTCTCCTTAGACCCAA+AGG | - | chr8.3:48390002-48390021 | MS.gene32251:intron | 50.0% | |
| ATTGACAGGCCAGAGTAAGC+CGG | + | chr8.3:48392092-48392111 | None:intergenic | 50.0% | |
| CAAGATATGGTGCAGGAAGC+CGG | + | chr8.3:48391776-48391795 | None:intergenic | 50.0% | |
| CAGGAATTCTGTTCTGCAGC+TGG | + | chr8.3:48390938-48390957 | None:intergenic | 50.0% | |
| CATGAAATGGCGTAGAGGCT+CGG | - | chr8.3:48389864-48389883 | MS.gene32251:intron | 50.0% | |
| CCGACAACAAGGTGAATGGA+TGG | + | chr8.3:48391393-48391412 | None:intergenic | 50.0% | |
| GAGTATTCCGCAACCACTAC+CGG | - | chr8.3:48392070-48392089 | MS.gene32251:CDS | 50.0% | |
| GATGAAGGGAACGTCACTGA+TGG | + | chr8.3:48388604-48388623 | None:intergenic | 50.0% | |
| GCACGTTAAATCCGTTGCAG+AGG | + | chr8.3:48392049-48392068 | None:intergenic | 50.0% | |
| GCAGAAAAGGTTGCTGTCAG+TGG | - | chr8.3:48390840-48390859 | MS.gene32251:intron | 50.0% | |
| GTCACCATGAAATGGCGTAG+AGG | - | chr8.3:48389859-48389878 | MS.gene32251:intron | 50.0% | |
| GTTATACCGGGCCTTGAAAG+CGG | + | chr8.3:48388816-48388835 | None:intergenic | 50.0% | |
| GTTCGTGGCATGCTTCCAAA+AGG | - | chr8.3:48390978-48390997 | MS.gene32251:intron | 50.0% | |
| TGGCATGCTTCCAAAAGGGA+GGG | - | chr8.3:48390983-48391002 | MS.gene32251:intron | 50.0% | |
| TGGTTTCAGACTTTCGGTGG+CGG | - | chr8.3:48391582-48391601 | MS.gene32251:intron | 50.0% | |
| TTATACCGGGCCTTGAAAGC+GGG | + | chr8.3:48388815-48388834 | None:intergenic | 50.0% | |
| TTGCATCTACCACCACCTGA+TGG | - | chr8.3:48391562-48391581 | MS.gene32251:intron | 50.0% | |
| ! | AAGGTTTGGAGCCGACAACA+AGG | + | chr8.3:48391404-48391423 | None:intergenic | 50.0% |
| ! | AGTCTGAAACCATCAGGTGG+TGG | + | chr8.3:48391574-48391593 | None:intergenic | 50.0% |
| ! | ATCAGGTGGTGGTAGATGCA+AGG | + | chr8.3:48391563-48391582 | None:intergenic | 50.0% |
| ! | GTGGGTTGAATAGTGGTGGT+GGG | - | chr8.3:48391347-48391366 | MS.gene32251:intron | 50.0% |
| ! | TGATGGTGAACCACACAGCA+AGG | + | chr8.3:48388587-48388606 | None:intergenic | 50.0% |
| !! | AGTGGGTTGAATAGTGGTGG+TGG | - | chr8.3:48391346-48391365 | MS.gene32251:intron | 50.0% |
| !! | CGGAGGGCATCGAAATAGAA+AGG | + | chr8.3:48391437-48391456 | None:intergenic | 50.0% |
| AAGAACCGCCGGACGTGAAT+CGG | + | chr8.3:48391670-48391689 | None:intergenic | 55.0% | |
| AATCGGCACAGCGGAGAAGA+TGG | + | chr8.3:48391653-48391672 | None:intergenic | 55.0% | |
| AGTGCCGCCGATAAAGCTTC+TGG | + | chr8.3:48390878-48390897 | None:intergenic | 55.0% | |
| CGAGCCTCTACGCCATTTCA+TGG | + | chr8.3:48389866-48389885 | None:intergenic | 55.0% | |
| CGGCTTCCTGCACCATATCT+TGG | - | chr8.3:48391774-48391793 | MS.gene32251:intron | 55.0% | |
| GAAGAGTGAAGACGGAGCAG+AGG | + | chr8.3:48391846-48391865 | None:intergenic | 55.0% | |
| GGAGCCGACAACAAGGTGAA+TGG | + | chr8.3:48391397-48391416 | None:intergenic | 55.0% | |
| GTCTCGACTGTCATACCACC+AGG | + | chr8.3:48390909-48390928 | None:intergenic | 55.0% | |
| GTGCCGCCGATAAAGCTTCT+GGG | + | chr8.3:48390877-48390896 | None:intergenic | 55.0% | |
| GTGGCATGCTTCCAAAAGGG+AGG | - | chr8.3:48390982-48391001 | MS.gene32251:intron | 55.0% | |
| TATACCGGGCCTTGAAAGCG+GGG | + | chr8.3:48388814-48388833 | None:intergenic | 55.0% | |
| TGCTGAGGCCTTTGGGTCTA+AGG | + | chr8.3:48390013-48390032 | None:intergenic | 55.0% | |
| TGGTGGCCAAGATATGGTGC+AGG | + | chr8.3:48391783-48391802 | None:intergenic | 55.0% | |
| ! | AAGCTTTATCGGCGGCACTC+AGG | - | chr8.3:48390879-48390898 | MS.gene32251:intron | 55.0% |
| ! | GAGTAAGCCGGTAGTGGTTG+CGG | + | chr8.3:48392080-48392099 | None:intergenic | 55.0% |
| ! | GGACCCAGAAGCTTTATCGG+CGG | - | chr8.3:48390871-48390890 | MS.gene32251:intron | 55.0% |
| !! | CAACCACTACCGGCTTACTC+TGG | - | chr8.3:48392080-48392099 | MS.gene32251:CDS | 55.0% |
| AGGCCAGAGTAAGCCGGTAG+TGG | + | chr8.3:48392086-48392105 | None:intergenic | 60.0% | |
| GAACCTGAGCCCCGCTTTCA+AGG | - | chr8.3:48388802-48388821 | MS.gene32251:CDS | 60.0% | |
| CCGGACGTGAATCGGCACAG+CGG | + | chr8.3:48391662-48391681 | None:intergenic | 65.0% | |
| TGAGCCCCGCTTTCAAGGCC+CGG | - | chr8.3:48388807-48388826 | MS.gene32251:CDS | 65.0% | |
| !! | CCGCTGTGCCGATTCACGTC+CGG | - | chr8.3:48391659-48391678 | MS.gene32251:intron | 65.0% |
| !! | CTGTGCCGATTCACGTCCGG+CGG | - | chr8.3:48391662-48391681 | MS.gene32251:intron | 65.0% |
| CGGCACTCAGGTCGACCTGG+TGG | - | chr8.3:48390891-48390910 | MS.gene32251:intron | 70.0% | |
| GGGCCTTGAAAGCGGGGCTC+AGG | + | chr8.3:48388808-48388827 | None:intergenic | 70.0% | |
| CGGCGGCACTCAGGTCGACC+TGG | - | chr8.3:48390888-48390907 | MS.gene32251:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 48388580 | 48392119 | 48388580 | ID=MS.gene32251 |
| chr8.3 | mRNA | 48388580 | 48392119 | 48388580 | ID=MS.gene32251.t1;Parent=MS.gene32251 |
| chr8.3 | exon | 48391871 | 48392119 | 48391871 | ID=MS.gene32251.t1.exon1;Parent=MS.gene32251.t1 |
| chr8.3 | CDS | 48391871 | 48392119 | 48391871 | ID=cds.MS.gene32251.t1;Parent=MS.gene32251.t1 |
| chr8.3 | exon | 48391127 | 48391312 | 48391127 | ID=MS.gene32251.t1.exon2;Parent=MS.gene32251.t1 |
| chr8.3 | CDS | 48391127 | 48391312 | 48391127 | ID=cds.MS.gene32251.t1;Parent=MS.gene32251.t1 |
| chr8.3 | exon | 48389695 | 48389865 | 48389695 | ID=MS.gene32251.t1.exon3;Parent=MS.gene32251.t1 |
| chr8.3 | CDS | 48389695 | 48389865 | 48389695 | ID=cds.MS.gene32251.t1;Parent=MS.gene32251.t1 |
| chr8.3 | exon | 48388800 | 48388870 | 48388800 | ID=MS.gene32251.t1.exon4;Parent=MS.gene32251.t1 |
| chr8.3 | CDS | 48388800 | 48388870 | 48388800 | ID=cds.MS.gene32251.t1;Parent=MS.gene32251.t1 |
| chr8.3 | exon | 48388580 | 48388691 | 48388580 | ID=MS.gene32251.t1.exon5;Parent=MS.gene32251.t1 |
| chr8.3 | CDS | 48388580 | 48388691 | 48388580 | ID=cds.MS.gene32251.t1;Parent=MS.gene32251.t1 |
| Gene Sequence |
| Protein sequence |
