Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051336.t1 | XP_013457216.1 | 94.9 | 470 | 24 | 0 | 1 | 470 | 1 | 470 | 2.90E-256 | 894 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051336.t1 | P28553 | 20.6 | 486 | 316 | 15 | 31 | 465 | 86 | 552 | 2.9e-10 | 68.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051336.t1 | A0A072UNG5 | 94.9 | 470 | 24 | 0 | 1 | 470 | 1 | 470 | 2.1e-256 | 894.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene051336 | 0.806252 | 9.00E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene051336 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene051336 | 0.805992 | 1.02E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene051336 | 0.817186 | 3.76E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene051336 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene051336 | 0.81195 | 5.42E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene051336 | 0.839394 | 1.63E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene051336 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene051336 | 0.860245 | 2.36E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene051336 | 0.819922 | 9.00E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene052503 | 0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene052615 | 0.821562 | 3.78E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene053213 | 0.807064 | 6.07E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene053286 | 0.805501 | 1.29E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene053480 | 0.803113 | 4.07E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene053632 | 0.824865 | 6.40E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene054595 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene051336 | MS.gene055362 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene055502 | 0.841669 | 4.13E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene056657 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene057831 | 0.810159 | 1.32E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene058019 | 0.801848 | 7.42E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene058419 | 0.830072 | 3.61E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene059677 | 0.82497 | 6.05E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene059718 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene059756 | 0.831664 | 1.47E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene06077 | 0.813804 | 2.13E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene061340 | 0.830377 | 3.04E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene061360 | 0.826777 | 2.25E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene061731 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene06226 | 0.804673 | 1.93E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene062839 | 0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene063072 | 0.821817 | 3.30E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene06408 | 0.805868 | 1.08E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene064435 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene06445 | 0.805427 | 1.34E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene064707 | 0.801573 | 8.45E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene064800 | 0.818834 | 1.59E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene066844 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene067060 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene068224 | 0.817664 | 2.93E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene068674 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene069593 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene071525 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene071526 | 0.811605 | 6.44E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene071527 | 0.80384 | 2.88E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene073883 | 0.807551 | 4.78E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene074247 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene074248 | 0.806488 | 8.03E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene074291 | 0.836856 | 7.32E-57 | -1.69E-46 |
| MS.gene051336 | MS.gene074566 | 0.809259 | 2.07E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene074567 | 0.812334 | 4.47E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene09661 | 0.837106 | 6.32E-57 | -1.69E-46 |
| MS.gene051336 | MS.gene09722 | 0.802517 | 5.40E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene09951 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene051336 | MS.gene20358 | 0.832398 | 9.67E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene21148 | 0.802156 | 6.41E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene21474 | 0.830517 | 2.81E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene22219 | 0.84132 | 5.10E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene22569 | 0.803252 | 3.81E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene22726 | 0.807203 | 5.67E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene22869 | 0.843411 | 1.42E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene23914 | 0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene24082 | 0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene24631 | 0.818313 | 2.09E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene24767 | 0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene051336 | MS.gene24950 | 0.837186 | 6.03E-57 | -1.69E-46 |
| MS.gene051336 | MS.gene25979 | 0.814857 | 1.24E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene26526 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene26527 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene26698 | 0.802899 | 4.51E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene27116 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene28052 | 0.836573 | 8.64E-57 | -1.69E-46 |
| MS.gene051336 | MS.gene28138 | 0.818737 | 1.68E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene30556 | 0.840288 | 9.52E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene31552 | 0.804582 | 2.02E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene32050 | 0.834715 | 2.55E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene32251 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene32652 | 0.822266 | 2.60E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene33047 | 0.830337 | 3.11E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene33534 | 0.805202 | 1.50E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene33769 | 0.801732 | 7.84E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene34308 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene35142 | 0.81533 | 9.77E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene35174 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene35176 | 0.848189 | 7.18E-60 | -1.69E-46 |
| MS.gene051336 | MS.gene36056 | 0.816068 | 6.69E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene36317 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene37999 | 0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene38250 | 0.829937 | 3.89E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene38252 | 0.82905 | 6.39E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene38328 | 0.816549 | 5.22E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene38348 | 0.820663 | 6.09E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene39629 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene40108 | 0.819854 | 9.33E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene40676 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene40954 | 0.808131 | 3.60E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene42301 | 0.805743 | 1.15E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene44017 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene44150 | 0.81547 | 9.09E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene45730 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene46952 | 0.817816 | 2.71E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene47811 | 0.807719 | 4.41E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene47831 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene47951 | 0.825668 | 4.14E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene50526 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene51258 | 0.802522 | 5.39E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene52273 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene52799 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene54561 | 0.803543 | 3.32E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene55803 | 0.807887 | 4.06E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene55815 | 0.816793 | 4.60E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene56284 | 0.817644 | 2.96E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene57394 | 0.804651 | 1.95E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene58416 | 0.81934 | 1.22E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene58779 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene59475 | 0.863841 | 1.87E-64 | -1.69E-46 |
| MS.gene051336 | MS.gene59657 | 0.812023 | 5.22E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene60360 | 0.813053 | 3.11E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene62792 | 0.813951 | 1.97E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene62850 | 0.804928 | 1.71E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene63264 | 0.805458 | 1.32E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene63480 | 0.802393 | 5.73E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene64385 | 0.807657 | 4.54E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene64777 | 0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene65400 | 0.818959 | 1.49E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene65597 | 0.854148 | 1.49E-61 | -1.69E-46 |
| MS.gene051336 | MS.gene68071 | 0.827369 | 1.63E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene69259 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene69357 | 0.826105 | 3.26E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene69450 | 0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene70143 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene70212 | 0.833127 | 6.37E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene70326 | 0.817387 | 3.39E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene71058 | 0.816774 | 4.65E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene71475 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene051336 | MS.gene71476 | 0.81651 | 5.33E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene72106 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene72216 | 0.809675 | 1.68E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene72720 | 0.840928 | 6.47E-58 | -1.69E-46 |
| MS.gene051336 | MS.gene72875 | 0.831907 | 1.28E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene72999 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene73087 | 0.825157 | 5.46E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene74184 | 0.813543 | 2.43E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene74217 | 0.804905 | 1.73E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene74579 | 0.829644 | 4.59E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene75688 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene76500 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene79879 | 0.809379 | 1.95E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene80239 | 0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene81067 | 0.803582 | 3.26E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene81275 | 0.832443 | 9.43E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene81747 | 0.812092 | 5.04E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene82916 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene83460 | 0.806933 | 6.46E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene83606 | 0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene051336 | MS.gene83941 | 0.816426 | 5.56E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene84043 | 0.80222 | 6.22E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene88820 | 0.827637 | 1.40E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene90277 | 0.824237 | 9.00E-54 | -1.69E-46 |
| MS.gene051336 | MS.gene90364 | 0.813064 | 3.09E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene90796 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene91533 | 0.815068 | 1.12E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene91801 | 0.818135 | 2.30E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene91915 | 0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene94806 | 0.803304 | 3.72E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene95038 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene95523 | 0.817898 | 2.60E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene96880 | 0.829447 | 5.12E-55 | -1.69E-46 |
| MS.gene051336 | MS.gene97726 | 0.817567 | 3.08E-52 | -1.69E-46 |
| MS.gene051336 | MS.gene98139 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene051336 | MS.gene98745 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene051336 | MS.gene98746 | 0.825183 | 5.39E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051336.t1 | MTR_4g094295 | 94.894 | 470 | 24 | 0 | 1 | 470 | 1 | 470 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051336.t1 | AT3G09580 | 65.895 | 475 | 152 | 4 | 4 | 469 | 3 | 476 | 0.0 | 606 |
Find 110 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATGGAGCTTTGGTTTC+TGG | 0.114822 | 4.1:-19399110 | MS.gene051336:CDS |
| GATTATAATGACGCCGGTTT+TGG | 0.217992 | 4.1:+19400327 | None:intergenic |
| GGATTGAATTTGAATGGTTT+TGG | 0.265688 | 4.1:+19400391 | None:intergenic |
| GGAAGCATTTGAGGACTTAT+AGG | 0.268361 | 4.1:-19399238 | MS.gene051336:CDS |
| CTAGAAGTTGTTTCGAGTTC+GGG | 0.279886 | 4.1:+19399812 | None:intergenic |
| TTGACCTCAGCTACATTTGA+TGG | 0.284242 | 4.1:-19399125 | MS.gene051336:CDS |
| AACCTCGCCGCTAACTGTTC+TGG | 0.286582 | 4.1:+19399716 | None:intergenic |
| GGCAAGTTGGGAGGAGCATT+TGG | 0.286950 | 4.1:+19400369 | None:intergenic |
| GGGTTGGTTTGGAGATAAAA+TGG | 0.298136 | 4.1:-19399270 | MS.gene051336:CDS |
| TAAGGTGGTTCAAGAACTTT+CGG | 0.316232 | 4.1:-19399291 | MS.gene051336:CDS |
| TGGAACCGATAGGGTTAGTT+AGG | 0.316739 | 4.1:+19400008 | None:intergenic |
| AGCTACATTTGATGGAGCTT+TGG | 0.321131 | 4.1:-19399117 | MS.gene051336:CDS |
| CAACCTCACACGCGGCGAAT+TGG | 0.324674 | 4.1:+19399637 | None:intergenic |
| TGCTTTGGTTAAATTATTAC+CGG | 0.329462 | 4.1:-19399558 | MS.gene051336:CDS |
| AAGGTGGTTCAAGAACTTTC+GGG | 0.337683 | 4.1:-19399290 | MS.gene051336:CDS |
| TTGGTTTCAGTATCATTGAT+TGG | 0.342124 | 4.1:-19399350 | MS.gene051336:CDS |
| TCTAGAAGTTGTTTCGAGTT+CGG | 0.358023 | 4.1:+19399811 | None:intergenic |
| GAAGAAGATGGAGCGGTTTG+TGG | 0.359878 | 4.1:+19400423 | None:intergenic |
| CATTTGGGATTGAATTTGAA+TGG | 0.363376 | 4.1:+19400385 | None:intergenic |
| CAAGAACTTTCGGGTTGGTT+TGG | 0.368642 | 4.1:-19399281 | MS.gene051336:CDS |
| GATCAGCGACGGTGTGGAAT+TGG | 0.372588 | 4.1:+19400062 | None:intergenic |
| TGCCGTTGAAGAACCTGCTT+TGG | 0.379343 | 4.1:-19399573 | MS.gene051336:CDS |
| AGCAGCTAAGCCGGCGAGGC+CGG | 0.382512 | 4.1:+19400300 | None:intergenic |
| ATCTTCAAGTGTCTCGCTCT+CGG | 0.393794 | 4.1:-19399776 | MS.gene051336:CDS |
| ATAAACCCGGTTCAATTGTT+GGG | 0.395707 | 4.1:+19399165 | None:intergenic |
| TGGAGAAGAAGTGAAGAAGA+TGG | 0.397924 | 4.1:+19400411 | None:intergenic |
| GATAAGCGGTGATGAAGATT+TGG | 0.402664 | 4.1:+19400164 | None:intergenic |
| GCAAGTTGGGAGGAGCATTT+GGG | 0.408251 | 4.1:+19400370 | None:intergenic |
| TTCGTAGGTGGACACTGATT+AGG | 0.415330 | 4.1:+19399200 | None:intergenic |
| TATAAACCCGGTTCAATTGT+TGG | 0.416106 | 4.1:+19399164 | None:intergenic |
| TCACGGACCGGGATTTGATC+CGG | 0.419244 | 4.1:+19399470 | None:intergenic |
| ATCATTGATTGGGTTATTTG+AGG | 0.423123 | 4.1:-19399339 | MS.gene051336:CDS |
| GATGAGTAATTTATCGAAGA+TGG | 0.424531 | 4.1:+19399988 | None:intergenic |
| TGGTTTCAGTATCATTGATT+GGG | 0.425020 | 4.1:-19399349 | MS.gene051336:CDS |
| TTGTTTGGTGGTGCATATGA+TGG | 0.430727 | 4.1:+19399377 | None:intergenic |
| TAAAAGAATGGAAGCATTTG+AGG | 0.433362 | 4.1:-19399247 | MS.gene051336:CDS |
| ACTGAAACCAATGCCTTGTT+TGG | 0.439459 | 4.1:+19399362 | None:intergenic |
| GGTAATAATTTAACCAAAGC+AGG | 0.443673 | 4.1:+19399560 | None:intergenic |
| AAAACCGGCGTCATTATAAT+CGG | 0.443912 | 4.1:-19400325 | MS.gene051336:CDS |
| ATAATCGGCGCCGGCCTCGC+CGG | 0.451537 | 4.1:-19400310 | MS.gene051336:CDS |
| TTAAATGATAGAGCCTTCAT+TGG | 0.454783 | 4.1:-19399065 | MS.gene051336:CDS |
| AAACAAACCGTACTCCGAAC+CGG | 0.454922 | 4.1:+19399509 | None:intergenic |
| ATGGGTTGCAGCAGCTAAGC+CGG | 0.461071 | 4.1:+19400291 | None:intergenic |
| AAGATGGAGCGGTTTGTGGA+AGG | 0.461867 | 4.1:+19400427 | None:intergenic |
| TGATGATGAGTTAGTGCTTA+AGG | 0.464469 | 4.1:-19399309 | MS.gene051336:CDS |
| CCCTCCTCACTCCCCAAAAC+CGG | 0.465238 | 4.1:-19400340 | MS.gene051336:CDS |
| AGATGGAGCGGTTTGTGGAA+GGG | 0.468158 | 4.1:+19400428 | None:intergenic |
| GGTTTAAGGATTGGTAATTG+AGG | 0.468393 | 4.1:+19400125 | None:intergenic |
| GAGATAAAATGGTAAAAGAA+TGG | 0.472262 | 4.1:-19399259 | MS.gene051336:CDS |
| CTCATCGGAACCACCAGAAT+CGG | 0.475119 | 4.1:-19399971 | MS.gene051336:CDS |
| ATGATTCGAGGAGGAGGAAA+GGG | 0.481642 | 4.1:+19400251 | None:intergenic |
| GATGATTCGAGGAGGAGGAA+AGG | 0.494340 | 4.1:+19400250 | None:intergenic |
| CGGGATTTGATCCGGGTTCG+CGG | 0.510981 | 4.1:+19399478 | None:intergenic |
| GACGCGACCACCGACGGCGT+TGG | 0.512717 | 4.1:+19400228 | None:intergenic |
| ATGGAGCTTTGGTTTCTGGT+AGG | 0.513614 | 4.1:-19399106 | MS.gene051336:CDS |
| TGGAGCGGTTTGTGGAAGGG+AGG | 0.514521 | 4.1:+19400431 | None:intergenic |
| GGAGCGGTTTGTGGAAGGGA+GGG | 0.524782 | 4.1:+19400432 | None:intergenic |
| AACAGAACTGGATCACGGAC+CGG | 0.529245 | 4.1:+19399458 | None:intergenic |
| ACAGAACTGGATCACGGACC+GGG | 0.531237 | 4.1:+19399459 | None:intergenic |
| CACGGACCGGGATTTGATCC+GGG | 0.532950 | 4.1:+19399471 | None:intergenic |
| TCTCGGCGAAAATACTCTTC+CGG | 0.537560 | 4.1:-19399759 | MS.gene051336:CDS |
| AAGAAGTGAAGAAGATGGAG+CGG | 0.538503 | 4.1:+19400416 | None:intergenic |
| GGAACCGATAGGGTTAGTTA+GGG | 0.540536 | 4.1:+19400009 | None:intergenic |
| GAAACCAATGCCTTGTTTGG+TGG | 0.542262 | 4.1:+19399365 | None:intergenic |
| CGCGAACCCGGATCAAATCC+CGG | 0.551217 | 4.1:-19399477 | MS.gene051336:CDS |
| ATGAAGCAATTAGCCAATGA+AGG | 0.551327 | 4.1:+19399052 | None:intergenic |
| ATCTTCGATAAATTACTCAT+CGG | 0.559784 | 4.1:-19399986 | MS.gene051336:CDS |
| GGTGCGGACGCGACCACCGA+CGG | 0.559991 | 4.1:+19400222 | None:intergenic |
| GTCCGCACCGACATTGTCGA+CGG | 0.561381 | 4.1:-19400208 | MS.gene051336:CDS |
| AGCGATTCCAGAACAGTTAG+CGG | 0.561707 | 4.1:-19399723 | MS.gene051336:CDS |
| GAATCATCCAACGCCGTCGG+TGG | 0.562334 | 4.1:-19400235 | MS.gene051336:CDS |
| ATCATATGCACCACCAAACA+AGG | 0.563468 | 4.1:-19399375 | MS.gene051336:CDS |
| TGCACCACCAAACAAGGCAT+TGG | 0.563916 | 4.1:-19399369 | MS.gene051336:CDS |
| CGTTGGATGATTCGAGGAGG+AGG | 0.564310 | 4.1:+19400245 | None:intergenic |
| TATCGAAGATGGAACCGATA+GGG | 0.569411 | 4.1:+19399999 | None:intergenic |
| GGCGTCATTATAATCGGCGC+CGG | 0.571907 | 4.1:-19400319 | MS.gene051336:CDS |
| AACCAAAGCAGGTTCTTCAA+CGG | 0.572199 | 4.1:+19399571 | None:intergenic |
| TGCGGTAAGAGTTTGTTCGT+CGG | 0.575993 | 4.1:+19399934 | None:intergenic |
| ATCGCTGAGATACCGTTCGC+CGG | 0.576771 | 4.1:+19399740 | None:intergenic |
| CGACGGCGTTGGATGATTCG+AGG | 0.576838 | 4.1:+19400239 | None:intergenic |
| CTCGAATCATCCAACGCCGT+CGG | 0.578935 | 4.1:-19400238 | MS.gene051336:CDS |
| AGATTTGGAAGCCACGGTCA+AGG | 0.586167 | 4.1:+19400179 | None:intergenic |
| CCGCGTGTGAGGTTGCAAAA+CGG | 0.593377 | 4.1:-19399629 | MS.gene051336:CDS |
| GCTTTGGTTAAATTATTACC+GGG | 0.596571 | 4.1:-19399557 | MS.gene051336:CDS |
| GCTCCAATTCGCCGCGTGTG+AGG | 0.600636 | 4.1:-19399640 | MS.gene051336:CDS |
| TGATGAAGATTTGGAAGCCA+CGG | 0.605471 | 4.1:+19400173 | None:intergenic |
| GAGGAAGCCGTCGACAATGT+CGG | 0.609084 | 4.1:+19400201 | None:intergenic |
| GGTGCTAAAATCTTCTACAA+CGG | 0.611207 | 4.1:-19400085 | MS.gene051336:CDS |
| AGCTCCATCAAATGTAGCTG+AGG | 0.611870 | 4.1:+19399121 | None:intergenic |
| TTATCGAAGATGGAACCGAT+AGG | 0.611986 | 4.1:+19399998 | None:intergenic |
| AAATCCCTAACTAACCCTAT+CGG | 0.614614 | 4.1:-19400013 | MS.gene051336:CDS |
| TGTGAGGACACCGATTCTGG+TGG | 0.616357 | 4.1:+19399961 | None:intergenic |
| GACGGCTTCCTCCTTGACCG+TGG | 0.618515 | 4.1:-19400190 | MS.gene051336:CDS |
| TGGTTCAAGAACTTTCGGGT+TGG | 0.622317 | 4.1:-19399286 | MS.gene051336:CDS |
| TTCAGCAAGATTGAATCTGA+CGG | 0.632422 | 4.1:+19399692 | None:intergenic |
| ATTGGAGCCGTCAAAATCAA+CGG | 0.640272 | 4.1:+19399655 | None:intergenic |
| GAACCGGGTTTATATTTGTG+TGG | 0.640779 | 4.1:-19399155 | MS.gene051336:CDS |
| GAAAATACTCTTCCGGCGAA+CGG | 0.650038 | 4.1:-19399752 | MS.gene051336:CDS |
| GAGTCGAAGAAATGGCGAAG+TGG | 0.653341 | 4.1:+19400040 | None:intergenic |
| AATTGTGGGAACTTCTTCTG+CGG | 0.656744 | 4.1:+19399916 | None:intergenic |
| GGCGCCGATTATAATGACGC+CGG | 0.658005 | 4.1:+19400321 | None:intergenic |
| TTCCAGAACAGTTAGCGGCG+AGG | 0.659731 | 4.1:-19399718 | MS.gene051336:CDS |
| ATGGCGAAGTGGATCAGCGA+CGG | 0.660659 | 4.1:+19400051 | None:intergenic |
| TCACCACACAAATATAAACC+CGG | 0.669871 | 4.1:+19399152 | None:intergenic |
| TTGCAGCAGCTAAGCCGGCG+AGG | 0.677374 | 4.1:+19400296 | None:intergenic |
| GAAGTGGATCAGCGACGGTG+TGG | 0.679688 | 4.1:+19400056 | None:intergenic |
| TTTGGAAGCCACGGTCAAGG+AGG | 0.708323 | 4.1:+19400182 | None:intergenic |
| AGCCGTCGACAATGTCGGTG+CGG | 0.709135 | 4.1:+19400206 | None:intergenic |
| TGATGAGTTAGTGCTTAAGG+TGG | 0.712943 | 4.1:-19399306 | MS.gene051336:CDS |
| CGGCGTTGGATGATTCGAGG+AGG | 0.723146 | 4.1:+19400242 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAGTAAGTCAATTGT+GGG | + | chr4.1:19399613-19399632 | None:intergenic | 20.0% |
| ! | ATCTTCGATAAATTACTCAT+CGG | - | chr4.1:19399526-19399545 | MS.gene051336:CDS | 25.0% |
| ! | GAGATAAAATGGTAAAAGAA+TGG | - | chr4.1:19400253-19400272 | MS.gene051336:CDS | 25.0% |
| ! | TGCTTTGGTTAAATTATTAC+CGG | - | chr4.1:19399954-19399973 | MS.gene051336:CDS | 25.0% |
| !! | ATTGACTTACTAAAAAAGCT+AGG | - | chr4.1:19399616-19399635 | MS.gene051336:CDS | 25.0% |
| !!! | CTTTTTTAGTAAGTCAATTG+TGG | + | chr4.1:19399614-19399633 | None:intergenic | 25.0% |
| GATGAGTAATTTATCGAAGA+TGG | + | chr4.1:19399527-19399546 | None:intergenic | 30.0% | |
| GCTTTGGTTAAATTATTACC+GGG | - | chr4.1:19399955-19399974 | MS.gene051336:CDS | 30.0% | |
| GGTAATAATTTAACCAAAGC+AGG | + | chr4.1:19399955-19399974 | None:intergenic | 30.0% | |
| TTAAAAACAGAACTGGATCA+CGG | + | chr4.1:19400062-19400081 | None:intergenic | 30.0% | |
| TTAAATGATAGAGCCTTCAT+TGG | - | chr4.1:19400447-19400466 | MS.gene051336:CDS | 30.0% | |
| TTGGTTTCAGTATCATTGAT+TGG | - | chr4.1:19400162-19400181 | MS.gene051336:CDS | 30.0% | |
| ! | ATCATTGATTGGGTTATTTG+AGG | - | chr4.1:19400173-19400192 | MS.gene051336:CDS | 30.0% |
| ! | CATTTGGGATTGAATTTGAA+TGG | + | chr4.1:19399130-19399149 | None:intergenic | 30.0% |
| ! | GGATTGAATTTGAATGGTTT+TGG | + | chr4.1:19399124-19399143 | None:intergenic | 30.0% |
| ! | TGGTTTCAGTATCATTGATT+GGG | - | chr4.1:19400163-19400182 | MS.gene051336:CDS | 30.0% |
| ! | TTTTTCTTCAAATTCGTAGG+TGG | + | chr4.1:19400327-19400346 | None:intergenic | 30.0% |
| !! | ATTTTTGGAGGTTTAAGGAT+TGG | + | chr4.1:19399399-19399418 | None:intergenic | 30.0% |
| !! | GTAGAATTTTTGGAGGTTTA+AGG | + | chr4.1:19399404-19399423 | None:intergenic | 30.0% |
| !! | TAAAAGAATGGAAGCATTTG+AGG | - | chr4.1:19400265-19400284 | MS.gene051336:CDS | 30.0% |
| !!! | AGTTCTGTTTTTAAACGGTT+CGG | - | chr4.1:19400068-19400087 | MS.gene051336:CDS | 30.0% |
| !!! | GATCCAGTTCTGTTTTTAAA+CGG | - | chr4.1:19400063-19400082 | MS.gene051336:CDS | 30.0% |
| AAAAACCCAACAATTGAACC+GGG | - | chr4.1:19400342-19400361 | MS.gene051336:CDS | 35.0% | |
| AAAACCGGCGTCATTATAAT+CGG | - | chr4.1:19399187-19399206 | MS.gene051336:CDS | 35.0% | |
| AAACCCGGTTTACAAAAAAC+CGG | - | chr4.1:19399984-19400003 | MS.gene051336:CDS | 35.0% | |
| AAATCCCTAACTAACCCTAT+CGG | - | chr4.1:19399499-19399518 | MS.gene051336:CDS | 35.0% | |
| AACCTCCAAAAATTCTACTC+AGG | - | chr4.1:19399406-19399425 | MS.gene051336:CDS | 35.0% | |
| AAGAAGATTCCGCCAAAAAA+CGG | + | chr4.1:19399676-19399695 | None:intergenic | 35.0% | |
| ATAAACCCGGTTCAATTGTT+GGG | + | chr4.1:19400350-19400369 | None:intergenic | 35.0% | |
| GAAAAACCCAACAATTGAAC+CGG | - | chr4.1:19400341-19400360 | MS.gene051336:CDS | 35.0% | |
| GAACCGTTTAAAAACAGAAC+TGG | + | chr4.1:19400069-19400088 | None:intergenic | 35.0% | |
| GGTGCTAAAATCTTCTACAA+CGG | - | chr4.1:19399427-19399446 | MS.gene051336:CDS | 35.0% | |
| TAAGGTGGTTCAAGAACTTT+CGG | - | chr4.1:19400221-19400240 | MS.gene051336:CDS | 35.0% | |
| TATAAACCCGGTTCAATTGT+TGG | + | chr4.1:19400351-19400370 | None:intergenic | 35.0% | |
| TCACCACACAAATATAAACC+CGG | + | chr4.1:19400363-19400382 | None:intergenic | 35.0% | |
| TTCAGCAAGATTGAATCTGA+CGG | + | chr4.1:19399823-19399842 | None:intergenic | 35.0% | |
| ! | GGGTTTTTCTTCAAATTCGT+AGG | + | chr4.1:19400330-19400349 | None:intergenic | 35.0% |
| ! | GGTTTAAGGATTGGTAATTG+AGG | + | chr4.1:19399390-19399409 | None:intergenic | 35.0% |
| ! | TAGCACCTGAGTAGAATTTT+TGG | + | chr4.1:19399414-19399433 | None:intergenic | 35.0% |
| ! | TGATGATGAGTTAGTGCTTA+AGG | - | chr4.1:19400203-19400222 | MS.gene051336:CDS | 35.0% |
| ! | TTTATATTTTACCGCGAACC+CGG | - | chr4.1:19400023-19400042 | MS.gene051336:CDS | 35.0% |
| !! | TCTAGAAGTTGTTTCGAGTT+CGG | + | chr4.1:19399704-19399723 | None:intergenic | 35.0% |
| !! | TTTTTAAACGGTTCGGGTAA+AGG | - | chr4.1:19400075-19400094 | MS.gene051336:CDS | 35.0% |
| !! | TTTTTGAGCTTCTGGATAAG+CGG | + | chr4.1:19399365-19399384 | None:intergenic | 35.0% |
| !!! | ATTATAATGACGCCGGTTTT+GGG | + | chr4.1:19399187-19399206 | None:intergenic | 35.0% |
| !!! | GATGTTTTTGGAGTTGAGAT+GGG | + | chr4.1:19399242-19399261 | None:intergenic | 35.0% |
| !!! | GTTCTGTTTTTAAACGGTTC+GGG | - | chr4.1:19400069-19400088 | MS.gene051336:CDS | 35.0% |
| AACCAAAGCAGGTTCTTCAA+CGG | + | chr4.1:19399944-19399963 | None:intergenic | 40.0% | |
| AAGAAGTGAAGAAGATGGAG+CGG | + | chr4.1:19399099-19399118 | None:intergenic | 40.0% | |
| AAGGTGGTTCAAGAACTTTC+GGG | - | chr4.1:19400222-19400241 | MS.gene051336:CDS | 40.0% | |
| AATTGTGGGAACTTCTTCTG+CGG | + | chr4.1:19399599-19399618 | None:intergenic | 40.0% | |
| AGCTACATTTGATGGAGCTT+TGG | - | chr4.1:19400395-19400414 | MS.gene051336:CDS | 40.0% | |
| ATCATATGCACCACCAAACA+AGG | - | chr4.1:19400137-19400156 | MS.gene051336:CDS | 40.0% | |
| ATTACCGGGAAAGAAAAACC+CGG | - | chr4.1:19399969-19399988 | MS.gene051336:CDS | 40.0% | |
| ATTGGAGCCGTCAAAATCAA+CGG | + | chr4.1:19399860-19399879 | None:intergenic | 40.0% | |
| CGGTTTACAAAAAACCGGTT+CGG | - | chr4.1:19399989-19400008 | MS.gene051336:CDS | 40.0% | |
| GAACCGGGTTTATATTTGTG+TGG | - | chr4.1:19400357-19400376 | MS.gene051336:CDS | 40.0% | |
| GATAAGCGGTGATGAAGATT+TGG | + | chr4.1:19399351-19399370 | None:intergenic | 40.0% | |
| TATCGAAGATGGAACCGATA+GGG | + | chr4.1:19399516-19399535 | None:intergenic | 40.0% | |
| TGATGAAGATTTGGAAGCCA+CGG | + | chr4.1:19399342-19399361 | None:intergenic | 40.0% | |
| TGATGAGTTAGTGCTTAAGG+TGG | - | chr4.1:19400206-19400225 | MS.gene051336:CDS | 40.0% | |
| TGGAGAAGAAGTGAAGAAGA+TGG | + | chr4.1:19399104-19399123 | None:intergenic | 40.0% | |
| TTATCGAAGATGGAACCGAT+AGG | + | chr4.1:19399517-19399536 | None:intergenic | 40.0% | |
| TTGACCTCAGCTACATTTGA+TGG | - | chr4.1:19400387-19400406 | MS.gene051336:CDS | 40.0% | |
| ! | ACTGAAACCAATGCCTTGTT+TGG | + | chr4.1:19400153-19400172 | None:intergenic | 40.0% |
| ! | ATTTTGCGGAGTCGAAGAAA+TGG | + | chr4.1:19399483-19399502 | None:intergenic | 40.0% |
| ! | TAAACCGGGTTTTTCTTTCC+CGG | + | chr4.1:19399976-19399995 | None:intergenic | 40.0% |
| ! | TTTGATGGAGCTTTGGTTTC+TGG | - | chr4.1:19400402-19400421 | MS.gene051336:CDS | 40.0% |
| ! | TTTGTTCGTCGGATTTTGTG+AGG | + | chr4.1:19399570-19399589 | None:intergenic | 40.0% |
| !! | CACCTGAGTAGAATTTTTGG+AGG | + | chr4.1:19399411-19399430 | None:intergenic | 40.0% |
| !! | CTAGAAGTTGTTTCGAGTTC+GGG | + | chr4.1:19399703-19399722 | None:intergenic | 40.0% |
| !! | GGAAGCATTTGAGGACTTAT+AGG | - | chr4.1:19400274-19400293 | MS.gene051336:CDS | 40.0% |
| !! | GGGTTGGTTTGGAGATAAAA+TGG | - | chr4.1:19400242-19400261 | MS.gene051336:CDS | 40.0% |
| !! | TTGAGGAGTTTTTGAGCTTC+TGG | + | chr4.1:19399373-19399392 | None:intergenic | 40.0% |
| !! | TTGTTTGGTGGTGCATATGA+TGG | + | chr4.1:19400138-19400157 | None:intergenic | 40.0% |
| !!! | AGATTCTTCCGACCGTTTTT+TGG | - | chr4.1:19399661-19399680 | MS.gene051336:CDS | 40.0% |
| !!! | AGGGTTAGTTAGGGATTTTG+CGG | + | chr4.1:19399497-19399516 | None:intergenic | 40.0% |
| !!! | CGAACCGGTTTTTTGTAAAC+CGG | + | chr4.1:19399991-19400010 | None:intergenic | 40.0% |
| !!! | GAACCGGTTTTTTGTAAACC+GGG | + | chr4.1:19399990-19400009 | None:intergenic | 40.0% |
| !!! | GATTATAATGACGCCGGTTT+TGG | + | chr4.1:19399188-19399207 | None:intergenic | 40.0% |
| !!! | GCAGTTTCCGTTGATTTTGA+CGG | - | chr4.1:19399850-19399869 | MS.gene051336:CDS | 40.0% |
| !!! | GGATGTTTTTGGAGTTGAGA+TGG | + | chr4.1:19399243-19399262 | None:intergenic | 40.0% |
| !!! | TTATAATGACGCCGGTTTTG+GGG | + | chr4.1:19399186-19399205 | None:intergenic | 40.0% |
| AAACAAACCGTACTCCGAAC+CGG | + | chr4.1:19400006-19400025 | None:intergenic | 45.0% | |
| AGATTCCGCCAAAAAACGGT+CGG | + | chr4.1:19399672-19399691 | None:intergenic | 45.0% | |
| AGCGATTCCAGAACAGTTAG+CGG | - | chr4.1:19399789-19399808 | MS.gene051336:CDS | 45.0% | |
| AGCTCCATCAAATGTAGCTG+AGG | + | chr4.1:19400394-19400413 | None:intergenic | 45.0% | |
| ATCTTCAAGTGTCTCGCTCT+CGG | - | chr4.1:19399736-19399755 | MS.gene051336:CDS | 45.0% | |
| ATGATTCGAGGAGGAGGAAA+GGG | + | chr4.1:19399264-19399283 | None:intergenic | 45.0% | |
| GAAAATACTCTTCCGGCGAA+CGG | - | chr4.1:19399760-19399779 | MS.gene051336:CDS | 45.0% | |
| TCTCGGCGAAAATACTCTTC+CGG | - | chr4.1:19399753-19399772 | MS.gene051336:CDS | 45.0% | |
| ! | GAGGAGGAAAGGGATGTTTT+TGG | + | chr4.1:19399254-19399273 | None:intergenic | 45.0% |
| ! | TGCGGTAAGAGTTTGTTCGT+CGG | + | chr4.1:19399581-19399600 | None:intergenic | 45.0% |
| ! | TGGTTCAAGAACTTTCGGGT+TGG | - | chr4.1:19400226-19400245 | MS.gene051336:CDS | 45.0% |
| ! | TTCGTAGGTGGACACTGATT+AGG | + | chr4.1:19400315-19400334 | None:intergenic | 45.0% |
| !! | ATGGAGCTTTGGTTTCTGGT+AGG | - | chr4.1:19400406-19400425 | MS.gene051336:CDS | 45.0% |
| !! | CAAAAAACCGGTTCGGAGTA+CGG | - | chr4.1:19399996-19400015 | MS.gene051336:CDS | 45.0% |
| !! | CAAGAACTTTCGGGTTGGTT+TGG | - | chr4.1:19400231-19400250 | MS.gene051336:CDS | 45.0% |
| !! | GAAACCAATGCCTTGTTTGG+TGG | + | chr4.1:19400150-19400169 | None:intergenic | 45.0% |
| !! | GACGTTTTGAGTAGCGAGTT+AGG | - | chr4.1:19399907-19399926 | MS.gene051336:CDS | 45.0% |
| !! | GGAACCGATAGGGTTAGTTA+GGG | + | chr4.1:19399506-19399525 | None:intergenic | 45.0% |
| !! | TGGAACCGATAGGGTTAGTT+AGG | + | chr4.1:19399507-19399526 | None:intergenic | 45.0% |
| !!! | TTCTTCCGACCGTTTTTTGG+CGG | - | chr4.1:19399664-19399683 | MS.gene051336:CDS | 45.0% |
| !!! | TTTTGTGAGGACACCGATTC+TGG | + | chr4.1:19399557-19399576 | None:intergenic | 45.0% |
| AACAGAACTGGATCACGGAC+CGG | + | chr4.1:19400057-19400076 | None:intergenic | 50.0% | |
| AAGATGGAGCGGTTTGTGGA+AGG | + | chr4.1:19399088-19399107 | None:intergenic | 50.0% | |
| AGATGGAGCGGTTTGTGGAA+GGG | + | chr4.1:19399087-19399106 | None:intergenic | 50.0% | |
| AGATTTGGAAGCCACGGTCA+AGG | + | chr4.1:19399336-19399355 | None:intergenic | 50.0% | |
| CTCATCGGAACCACCAGAAT+CGG | - | chr4.1:19399541-19399560 | MS.gene051336:CDS | 50.0% | |
| GAAGAAGATGGAGCGGTTTG+TGG | + | chr4.1:19399092-19399111 | None:intergenic | 50.0% | |
| GAGTCGAAGAAATGGCGAAG+TGG | + | chr4.1:19399475-19399494 | None:intergenic | 50.0% | |
| GATGATTCGAGGAGGAGGAA+AGG | + | chr4.1:19399265-19399284 | None:intergenic | 50.0% | |
| TGCACCACCAAACAAGGCAT+TGG | - | chr4.1:19400143-19400162 | MS.gene051336:CDS | 50.0% | |
| TGCCGTTGAAGAACCTGCTT+TGG | - | chr4.1:19399939-19399958 | MS.gene051336:CDS | 50.0% | |
| !! | GCAAGTTGGGAGGAGCATTT+GGG | + | chr4.1:19399145-19399164 | None:intergenic | 50.0% |
| AACCTCGCCGCTAACTGTTC+TGG | + | chr4.1:19399799-19399818 | None:intergenic | 55.0% | |
| ACAGAACTGGATCACGGACC+GGG | + | chr4.1:19400056-19400075 | None:intergenic | 55.0% | |
| ATCGCTGAGATACCGTTCGC+CGG | + | chr4.1:19399775-19399794 | None:intergenic | 55.0% | |
| ATGGCGAAGTGGATCAGCGA+CGG | + | chr4.1:19399464-19399483 | None:intergenic | 55.0% | |
| CCGCGTGTGAGGTTGCAAAA+CGG | - | chr4.1:19399883-19399902 | MS.gene051336:CDS | 55.0% | |
| CGTTGGATGATTCGAGGAGG+AGG | + | chr4.1:19399270-19399289 | None:intergenic | 55.0% | |
| CTCGAATCATCCAACGCCGT+CGG | - | chr4.1:19399274-19399293 | MS.gene051336:CDS | 55.0% | |
| GAGGAAGCCGTCGACAATGT+CGG | + | chr4.1:19399314-19399333 | None:intergenic | 55.0% | |
| GATCAGCGACGGTGTGGAAT+TGG | + | chr4.1:19399453-19399472 | None:intergenic | 55.0% | |
| GGCGTCATTATAATCGGCGC+CGG | - | chr4.1:19399193-19399212 | MS.gene051336:CDS | 55.0% | |
| TCACGGACCGGGATTTGATC+CGG | + | chr4.1:19400045-19400064 | None:intergenic | 55.0% | |
| TTCCAGAACAGTTAGCGGCG+AGG | - | chr4.1:19399794-19399813 | MS.gene051336:CDS | 55.0% | |
| TTTGGAAGCCACGGTCAAGG+AGG | + | chr4.1:19399333-19399352 | None:intergenic | 55.0% | |
| ! | ATGGGTTGCAGCAGCTAAGC+CGG | + | chr4.1:19399224-19399243 | None:intergenic | 55.0% |
| ! | CCGTTTTGCAACCTCACACG+CGG | + | chr4.1:19399886-19399905 | None:intergenic | 55.0% |
| !! | GGCAAGTTGGGAGGAGCATT+TGG | + | chr4.1:19399146-19399165 | None:intergenic | 55.0% |
| !! | GGCGCCGATTATAATGACGC+CGG | + | chr4.1:19399194-19399213 | None:intergenic | 55.0% |
| !! | TGTGAGGACACCGATTCTGG+TGG | + | chr4.1:19399554-19399573 | None:intergenic | 55.0% |
| AGCCGTCGACAATGTCGGTG+CGG | + | chr4.1:19399309-19399328 | None:intergenic | 60.0% | |
| CAACCTCACACGCGGCGAAT+TGG | + | chr4.1:19399878-19399897 | None:intergenic | 60.0% | |
| CACGGACCGGGATTTGATCC+GGG | + | chr4.1:19400044-19400063 | None:intergenic | 60.0% | |
| CCCTCCTCACTCCCCAAAAC+CGG | - | chr4.1:19399172-19399191 | MS.gene051336:CDS | 60.0% | |
| CGCGAACCCGGATCAAATCC+CGG | - | chr4.1:19400035-19400054 | MS.gene051336:CDS | 60.0% | |
| CGGGATTTGATCCGGGTTCG+CGG | + | chr4.1:19400037-19400056 | None:intergenic | 60.0% | |
| GAAGTGGATCAGCGACGGTG+TGG | + | chr4.1:19399459-19399478 | None:intergenic | 60.0% | |
| GAATCATCCAACGCCGTCGG+TGG | - | chr4.1:19399277-19399296 | MS.gene051336:CDS | 60.0% | |
| GGAGCGGTTTGTGGAAGGGA+GGG | + | chr4.1:19399083-19399102 | None:intergenic | 60.0% | |
| TGGAGCGGTTTGTGGAAGGG+AGG | + | chr4.1:19399084-19399103 | None:intergenic | 60.0% | |
| ! | CGACGGCGTTGGATGATTCG+AGG | + | chr4.1:19399276-19399295 | None:intergenic | 60.0% |
| ! | CGGCGTTGGATGATTCGAGG+AGG | + | chr4.1:19399273-19399292 | None:intergenic | 60.0% |
| ! | GTCCGCACCGACATTGTCGA+CGG | - | chr4.1:19399304-19399323 | MS.gene051336:CDS | 60.0% |
| !!! | CCGGTTTTGGGGAGTGAGGA+GGG | + | chr4.1:19399175-19399194 | None:intergenic | 60.0% |
| !!! | CGGTTTTGGGGAGTGAGGAG+GGG | + | chr4.1:19399174-19399193 | None:intergenic | 60.0% |
| !!! | GGTTTTGGGGAGTGAGGAGG+GGG | + | chr4.1:19399173-19399192 | None:intergenic | 60.0% |
| GACGGCTTCCTCCTTGACCG+TGG | - | chr4.1:19399322-19399341 | MS.gene051336:CDS | 65.0% | |
| GCTCCAATTCGCCGCGTGTG+AGG | - | chr4.1:19399872-19399891 | MS.gene051336:CDS | 65.0% | |
| TTGCAGCAGCTAAGCCGGCG+AGG | + | chr4.1:19399219-19399238 | None:intergenic | 65.0% | |
| TTGGGGAGTGAGGAGGGGGT+GGG | + | chr4.1:19399169-19399188 | None:intergenic | 65.0% | |
| TTTGGGGAGTGAGGAGGGGG+TGG | + | chr4.1:19399170-19399189 | None:intergenic | 65.0% | |
| !!! | GACGCCGGTTTTGGGGAGTG+AGG | + | chr4.1:19399179-19399198 | None:intergenic | 65.0% |
| !!! | GCCGGTTTTGGGGAGTGAGG+AGG | + | chr4.1:19399176-19399195 | None:intergenic | 65.0% |
| AGCAGCTAAGCCGGCGAGGC+CGG | + | chr4.1:19399215-19399234 | None:intergenic | 70.0% | |
| AGGAGGGGGTGGGGGCAAGT+TGG | + | chr4.1:19399159-19399178 | None:intergenic | 70.0% | |
| GGAGGGGGTGGGGGCAAGTT+GGG | + | chr4.1:19399158-19399177 | None:intergenic | 70.0% | |
| TGGGGAGTGAGGAGGGGGTG+GGG | + | chr4.1:19399168-19399187 | None:intergenic | 70.0% | |
| !! | ATAATCGGCGCCGGCCTCGC+CGG | - | chr4.1:19399202-19399221 | MS.gene051336:CDS | 70.0% |
| GACGCGACCACCGACGGCGT+TGG | + | chr4.1:19399287-19399306 | None:intergenic | 75.0% | |
| GGGGAGTGAGGAGGGGGTGG+GGG | + | chr4.1:19399167-19399186 | None:intergenic | 75.0% | |
| GGTGCGGACGCGACCACCGA+CGG | + | chr4.1:19399293-19399312 | None:intergenic | 75.0% | |
| ! | GGGGGTGGGGGCAAGTTGGG+AGG | + | chr4.1:19399155-19399174 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 19399061 | 19400473 | 19399061 | ID=MS.gene051336 |
| chr4.1 | mRNA | 19399061 | 19400473 | 19399061 | ID=MS.gene051336.t1;Parent=MS.gene051336 |
| chr4.1 | exon | 19399061 | 19400473 | 19399061 | ID=MS.gene051336.t1.exon1;Parent=MS.gene051336.t1 |
| chr4.1 | CDS | 19399061 | 19400473 | 19399061 | ID=cds.MS.gene051336.t1;Parent=MS.gene051336.t1 |
| Gene Sequence |
| Protein sequence |
