Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98746.t1 | RHN58791.1 | 99.3 | 289 | 2 | 0 | 1 | 289 | 59 | 347 | 1.30E-161 | 578.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98746.t1 | Q07473 | 86.9 | 290 | 37 | 1 | 1 | 289 | 1 | 290 | 6.0e-144 | 511.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98746.t1 | B7FIZ5 | 99.3 | 289 | 2 | 0 | 1 | 289 | 1 | 289 | 9.2e-162 | 578.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene98746 | 0.810656 | 1.03E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene98746 | 0.924726 | 4.79E-90 | -1.69E-46 |
| MS.gene049173 | MS.gene98746 | 0.873087 | 1.93E-67 | -1.69E-46 |
| MS.gene049217 | MS.gene98746 | 0.885711 | 6.42E-72 | -1.69E-46 |
| MS.gene049222 | MS.gene98746 | 0.901237 | 3.28E-78 | -1.69E-46 |
| MS.gene049232 | MS.gene98746 | 0.892529 | 1.46E-74 | -1.69E-46 |
| MS.gene049281 | MS.gene98746 | -0.806692 | 7.27E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene98746 | 0.94544 | 3.04E-104 | -1.69E-46 |
| MS.gene049320 | MS.gene98746 | 0.956349 | 3.63E-114 | -1.69E-46 |
| MS.gene04938 | MS.gene98746 | 0.82567 | 4.13E-54 | -1.69E-46 |
| MS.gene04939 | MS.gene98746 | 0.875588 | 2.74E-68 | -1.69E-46 |
| MS.gene049483 | MS.gene98746 | -0.807669 | 4.52E-50 | -1.69E-46 |
| MS.gene049600 | MS.gene98746 | 0.826837 | 2.18E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene98746 | 0.879068 | 1.68E-69 | -1.69E-46 |
| MS.gene049611 | MS.gene98746 | -0.82929 | 5.59E-55 | -1.69E-46 |
| MS.gene049615 | MS.gene98746 | 0.800641 | 1.31E-48 | -1.69E-46 |
| MS.gene049627 | MS.gene98746 | 0.874577 | 6.06E-68 | -1.69E-46 |
| MS.gene049633 | MS.gene98746 | 0.875813 | 2.29E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene98746 | 0.858868 | 6.13E-63 | -1.69E-46 |
| MS.gene049865 | MS.gene98746 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene98746 | 0.925426 | 1.87E-90 | -1.69E-46 |
| MS.gene050163 | MS.gene98746 | 0.935295 | 1.06E-96 | -1.69E-46 |
| MS.gene050165 | MS.gene98746 | 0.926236 | 6.19E-91 | -1.69E-46 |
| MS.gene050170 | MS.gene98746 | 0.867703 | 1.13E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene98746 | 0.837625 | 4.65E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene98746 | 0.884635 | 1.62E-71 | -1.69E-46 |
| MS.gene050333 | MS.gene98746 | 0.909513 | 5.24E-82 | -1.69E-46 |
| MS.gene050381 | MS.gene98746 | -0.836229 | 1.06E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene98746 | 0.8524 | 4.73E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene98746 | 0.881575 | 2.14E-70 | -1.69E-46 |
| MS.gene050504 | MS.gene98746 | 0.955091 | 6.73E-113 | -1.69E-46 |
| MS.gene050518 | MS.gene98746 | 0.928091 | 4.71E-92 | -1.69E-46 |
| MS.gene050538 | MS.gene98746 | 0.802773 | 4.78E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene98746 | 0.911707 | 4.48E-83 | -1.69E-46 |
| MS.gene050593 | MS.gene98746 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene98746 | 0.950008 | 3.98E-108 | -1.69E-46 |
| MS.gene050647 | MS.gene98746 | -0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene050662 | MS.gene98746 | 0.821671 | 3.57E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene98746 | 0.922447 | 9.72E-89 | -1.69E-46 |
| MS.gene050699 | MS.gene98746 | 0.945348 | 3.61E-104 | -1.69E-46 |
| MS.gene050747 | MS.gene98746 | 0.863141 | 3.08E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene98746 | 0.908297 | 1.99E-81 | -1.69E-46 |
| MS.gene05080 | MS.gene98746 | 0.848636 | 5.40E-60 | -1.69E-46 |
| MS.gene050868 | MS.gene98746 | 0.873522 | 1.38E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene98746 | 0.873085 | 1.93E-67 | -1.69E-46 |
| MS.gene050876 | MS.gene98746 | 0.876892 | 9.73E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene98746 | 0.82155 | 3.80E-53 | -1.69E-46 |
| MS.gene050883 | MS.gene98746 | -0.847366 | 1.21E-59 | -1.69E-46 |
| MS.gene050904 | MS.gene98746 | 0.858503 | 7.88E-63 | -1.69E-46 |
| MS.gene050950 | MS.gene98746 | 0.859382 | 4.30E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene98746 | 0.967748 | 1.05E-127 | -1.69E-46 |
| MS.gene05100 | MS.gene98746 | 0.896383 | 3.89E-76 | -1.69E-46 |
| MS.gene05104 | MS.gene98746 | -0.813729 | 2.21E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene98746 | -0.858358 | 8.70E-63 | -1.69E-46 |
| MS.gene051138 | MS.gene98746 | -0.81576 | 7.84E-52 | -1.69E-46 |
| MS.gene051167 | MS.gene98746 | -0.801847 | 7.42E-49 | -1.69E-46 |
| MS.gene05118 | MS.gene98746 | 0.802317 | 5.94E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene98746 | 0.831097 | 2.03E-55 | -1.69E-46 |
| MS.gene051268 | MS.gene98746 | 0.846864 | 1.66E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene98746 | 0.892376 | 1.68E-74 | -1.69E-46 |
| MS.gene051336 | MS.gene98746 | 0.825183 | 5.39E-54 | -1.69E-46 |
| MS.gene051364 | MS.gene98746 | -0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene98746 | -0.821511 | 3.88E-53 | -1.69E-46 |
| MS.gene05141 | MS.gene98746 | -0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene98746 | 0.844706 | 6.40E-59 | -1.69E-46 |
| MS.gene051551 | MS.gene98746 | 0.926226 | 6.27E-91 | -1.69E-46 |
| MS.gene051564 | MS.gene98746 | 0.833088 | 6.52E-56 | -1.69E-46 |
| MS.gene051566 | MS.gene98746 | 0.806694 | 7.26E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene98746 | -0.812019 | 5.23E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene98746 | 0.806997 | 6.27E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene98746 | 0.810209 | 1.29E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene98746 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene98746 | 0.919773 | 2.96E-87 | -1.69E-46 |
| MS.gene051838 | MS.gene98746 | 0.80758 | 4.72E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene98746 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene98746 | 0.804732 | 1.88E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene98746 | -0.810646 | 1.04E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene98746 | 0.846478 | 2.12E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene98746 | 0.8884 | 6.11E-73 | -1.69E-46 |
| MS.gene052271 | MS.gene98746 | 0.886816 | 2.46E-72 | -1.69E-46 |
| MS.gene052379 | MS.gene98746 | 0.828057 | 1.11E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene98746 | 0.879976 | 8.02E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene98746 | 0.891527 | 3.66E-74 | -1.69E-46 |
| MS.gene052501 | MS.gene98746 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene98746 | 0.882722 | 8.20E-71 | -1.69E-46 |
| MS.gene052504 | MS.gene98746 | 0.822342 | 2.49E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene98746 | 0.843077 | 1.75E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene98746 | 0.885933 | 5.30E-72 | -1.69E-46 |
| MS.gene052670 | MS.gene98746 | 0.826216 | 3.06E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene98746 | 0.8563 | 3.53E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene98746 | 0.880335 | 5.97E-70 | -1.69E-46 |
| MS.gene052825 | MS.gene98746 | 0.873858 | 1.06E-67 | -1.69E-46 |
| MS.gene052872 | MS.gene98746 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene98746 | 0.861496 | 9.85E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene98746 | 0.893062 | 8.91E-75 | -1.69E-46 |
| MS.gene053009 | MS.gene98746 | 0.811605 | 6.44E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene98746 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene98746 | 0.89342 | 6.39E-75 | -1.69E-46 |
| MS.gene053207 | MS.gene98746 | 0.873858 | 1.06E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene98746 | 0.932731 | 5.48E-95 | -1.69E-46 |
| MS.gene053284 | MS.gene98746 | 0.81994 | 8.92E-53 | -1.69E-46 |
| MS.gene053285 | MS.gene98746 | 0.807007 | 6.24E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene98746 | 0.935762 | 5.09E-97 | -1.69E-46 |
| MS.gene053322 | MS.gene98746 | 0.821233 | 4.50E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene98746 | -0.851469 | 8.70E-61 | -1.69E-46 |
| MS.gene053436 | MS.gene98746 | 0.880889 | 3.78E-70 | -1.69E-46 |
| MS.gene053479 | MS.gene98746 | 0.835411 | 1.70E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene98746 | 0.873467 | 1.44E-67 | -1.69E-46 |
| MS.gene053549 | MS.gene98746 | -0.835618 | 1.51E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene98746 | -0.825902 | 3.64E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene98746 | 0.880913 | 3.71E-70 | -1.69E-46 |
| MS.gene053626 | MS.gene98746 | 0.840573 | 8.02E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene98746 | 0.894082 | 3.44E-75 | -1.69E-46 |
| MS.gene053633 | MS.gene98746 | 0.813619 | 2.34E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene98746 | 0.852978 | 3.24E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene98746 | 0.851308 | 9.66E-61 | -1.69E-46 |
| MS.gene054003 | MS.gene98746 | 0.808099 | 3.66E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene98746 | 0.857461 | 1.61E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene98746 | 0.899609 | 1.67E-77 | -1.69E-46 |
| MS.gene054600 | MS.gene98746 | 0.913984 | 3.26E-84 | -1.69E-46 |
| MS.gene054616 | MS.gene98746 | -0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene98746 | 0.928006 | 5.30E-92 | -1.69E-46 |
| MS.gene054706 | MS.gene98746 | -0.817115 | 3.90E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene98746 | -0.828258 | 9.93E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene98746 | 0.905487 | 4.08E-80 | -1.69E-46 |
| MS.gene054927 | MS.gene98746 | 0.824802 | 6.63E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene98746 | 0.950979 | 5.35E-109 | -1.69E-46 |
| MS.gene054959 | MS.gene98746 | -0.808157 | 3.56E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene98746 | 0.82084 | 5.54E-53 | -1.69E-46 |
| MS.gene055139 | MS.gene98746 | -0.807997 | 3.85E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene98746 | -0.862033 | 6.75E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene98746 | 0.85051 | 1.62E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene98746 | 0.833204 | 6.10E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene98746 | 0.814302 | 1.65E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene98746 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene98746 | 0.965886 | 3.44E-125 | -1.69E-46 |
| MS.gene055397 | MS.gene98746 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene98746 | 0.840861 | 6.74E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene98746 | 0.9296 | 5.51E-93 | -1.69E-46 |
| MS.gene055577 | MS.gene98746 | 0.887409 | 1.46E-72 | -1.69E-46 |
| MS.gene055629 | MS.gene98746 | 0.825424 | 4.72E-54 | -1.69E-46 |
| MS.gene055634 | MS.gene98746 | 0.829097 | 6.23E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene98746 | 0.832407 | 9.62E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene98746 | 0.844424 | 7.62E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene98746 | 0.851337 | 9.48E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene98746 | 0.884374 | 2.02E-71 | -1.69E-46 |
| MS.gene055748 | MS.gene98746 | 0.884398 | 1.98E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene98746 | 0.877404 | 6.46E-69 | -1.69E-46 |
| MS.gene055751 | MS.gene98746 | 0.889832 | 1.70E-73 | -1.69E-46 |
| MS.gene055776 | MS.gene98746 | 0.91357 | 5.28E-84 | -1.69E-46 |
| MS.gene055849 | MS.gene98746 | 0.819287 | 1.26E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene98746 | 0.897475 | 1.36E-76 | -1.69E-46 |
| MS.gene05592 | MS.gene98746 | 0.827854 | 1.24E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene98746 | 0.866886 | 2.05E-65 | -1.69E-46 |
| MS.gene055942 | MS.gene98746 | -0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene055956 | MS.gene98746 | -0.826167 | 3.15E-54 | -1.69E-46 |
| MS.gene056040 | MS.gene98746 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene98746 | 0.83474 | 2.52E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene98746 | 0.855807 | 4.92E-62 | -1.69E-46 |
| MS.gene056311 | MS.gene98746 | -0.802556 | 5.30E-49 | -1.69E-46 |
| MS.gene056359 | MS.gene98746 | -0.804474 | 2.12E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene98746 | 0.920515 | 1.16E-87 | -1.69E-46 |
| MS.gene056387 | MS.gene98746 | 0.802799 | 4.73E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene98746 | 0.833169 | 6.22E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene98746 | 0.81756 | 3.10E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene98746 | 0.825061 | 5.76E-54 | -1.69E-46 |
| MS.gene056450 | MS.gene98746 | 0.842166 | 3.05E-58 | -1.69E-46 |
| MS.gene056487 | MS.gene98746 | 0.820863 | 5.48E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene98746 | 0.938404 | 7.12E-99 | -1.69E-46 |
| MS.gene056510 | MS.gene98746 | 0.929726 | 4.59E-93 | -1.69E-46 |
| MS.gene056549 | MS.gene98746 | 0.838772 | 2.36E-57 | -1.69E-46 |
| MS.gene056550 | MS.gene98746 | -0.844898 | 5.68E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene98746 | 0.838041 | 3.64E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene98746 | 0.948723 | 5.35E-107 | -1.69E-46 |
| MS.gene056692 | MS.gene98746 | 0.886258 | 4.00E-72 | -1.69E-46 |
| MS.gene056878 | MS.gene98746 | 0.840254 | 9.71E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene98746 | 0.84067 | 7.56E-58 | -1.69E-46 |
| MS.gene056946 | MS.gene98746 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene98746 | -0.82478 | 6.71E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene98746 | 0.836687 | 8.09E-57 | -1.69E-46 |
| MS.gene057086 | MS.gene98746 | 0.827576 | 1.45E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene98746 | 0.846172 | 2.57E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene98746 | 0.857958 | 1.14E-62 | -1.69E-46 |
| MS.gene057416 | MS.gene98746 | 0.892644 | 1.31E-74 | -1.69E-46 |
| MS.gene05753 | MS.gene98746 | 0.814768 | 1.30E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene98746 | 0.844955 | 5.48E-59 | -1.69E-46 |
| MS.gene057805 | MS.gene98746 | 0.801316 | 9.53E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene98746 | 0.885038 | 1.15E-71 | -1.69E-46 |
| MS.gene057856 | MS.gene98746 | 0.808996 | 2.35E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene98746 | 0.817976 | 2.49E-52 | -1.69E-46 |
| MS.gene057872 | MS.gene98746 | 0.803611 | 3.21E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene98746 | 0.831845 | 1.32E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene98746 | 0.820378 | 7.08E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene98746 | 0.841894 | 3.60E-58 | -1.69E-46 |
| MS.gene058111 | MS.gene98746 | -0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene058117 | MS.gene98746 | -0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene98746 | 0.811222 | 7.80E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene98746 | 0.822037 | 2.93E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene98746 | -0.805735 | 1.16E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene98746 | -0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene98746 | -0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene98746 | -0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene98746 | 0.810032 | 1.41E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene98746 | -0.843996 | 9.93E-59 | -1.69E-46 |
| MS.gene058335 | MS.gene98746 | 0.809068 | 2.27E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene98746 | 0.844206 | 8.73E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene98746 | 0.860804 | 1.60E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene98746 | 0.943519 | 1.04E-102 | -1.69E-46 |
| MS.gene058544 | MS.gene98746 | 0.8988 | 3.72E-77 | -1.69E-46 |
| MS.gene058719 | MS.gene98746 | 0.856834 | 2.46E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene98746 | 0.867971 | 9.23E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene98746 | 0.920018 | 2.17E-87 | -1.69E-46 |
| MS.gene058838 | MS.gene98746 | 0.881067 | 3.27E-70 | -1.69E-46 |
| MS.gene05883 | MS.gene98746 | 0.833423 | 5.38E-56 | -1.69E-46 |
| MS.gene058978 | MS.gene98746 | -0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene98746 | 0.967908 | 6.26E-128 | -1.69E-46 |
| MS.gene059023 | MS.gene98746 | 0.88799 | 8.77E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene98746 | 0.845386 | 4.19E-59 | -1.69E-46 |
| MS.gene05912 | MS.gene98746 | 0.818468 | 1.93E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene98746 | 0.851923 | 6.47E-61 | -1.69E-46 |
| MS.gene05914 | MS.gene98746 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene98746 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene98746 | 0.857253 | 1.85E-62 | -1.69E-46 |
| MS.gene059455 | MS.gene98746 | 0.801066 | 1.07E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene98746 | 0.825399 | 4.79E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene98746 | 0.951246 | 3.06E-109 | -1.69E-46 |
| MS.gene059718 | MS.gene98746 | 0.930314 | 1.96E-93 | -1.69E-46 |
| MS.gene059756 | MS.gene98746 | 0.898123 | 7.22E-77 | -1.69E-46 |
| MS.gene059801 | MS.gene98746 | 0.864057 | 1.60E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene98746 | 0.84997 | 2.30E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene98746 | 0.929669 | 4.98E-93 | -1.69E-46 |
| MS.gene059902 | MS.gene98746 | 0.835946 | 1.25E-56 | -1.69E-46 |
| MS.gene059916 | MS.gene98746 | -0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene98746 | 0.806204 | 9.22E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene98746 | 0.865455 | 5.83E-65 | -1.69E-46 |
| MS.gene060337 | MS.gene98746 | -0.832431 | 9.49E-56 | -1.69E-46 |
| MS.gene060341 | MS.gene98746 | 0.847937 | 8.43E-60 | -1.69E-46 |
| MS.gene060356 | MS.gene98746 | 0.817498 | 3.20E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene98746 | 0.862051 | 6.66E-64 | -1.69E-46 |
| MS.gene060595 | MS.gene98746 | -0.828652 | 7.98E-55 | -1.69E-46 |
| MS.gene060602 | MS.gene98746 | -0.801222 | 9.97E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene98746 | 0.90666 | 1.17E-80 | -1.69E-46 |
| MS.gene060727 | MS.gene98746 | 0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene060728 | MS.gene98746 | 0.839739 | 1.32E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene98746 | 0.911798 | 4.04E-83 | -1.69E-46 |
| MS.gene060778 | MS.gene98746 | 0.902347 | 1.06E-78 | -1.69E-46 |
| MS.gene06077 | MS.gene98746 | 0.940337 | 2.77E-100 | -1.69E-46 |
| MS.gene060823 | MS.gene98746 | -0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene98746 | 0.826183 | 3.12E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene98746 | 0.851095 | 1.11E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene98746 | 0.803592 | 3.24E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene98746 | 0.906643 | 1.19E-80 | -1.69E-46 |
| MS.gene061134 | MS.gene98746 | 0.856621 | 2.84E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene98746 | 0.907687 | 3.87E-81 | -1.69E-46 |
| MS.gene061171 | MS.gene98746 | 0.850599 | 1.53E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene98746 | 0.839434 | 1.59E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98746.t1 | MTR_4g015570 | 99.308 | 289 | 2 | 0 | 1 | 289 | 1 | 289 | 0.0 | 587 |
| MS.gene98746.t1 | MTR_3g070340 | 70.566 | 265 | 74 | 1 | 12 | 272 | 11 | 275 | 8.49e-134 | 380 |
| MS.gene98746.t1 | MTR_6g033320 | 40.000 | 230 | 90 | 5 | 57 | 282 | 49 | 234 | 2.30e-44 | 151 |
| MS.gene98746.t1 | MTR_2g042720 | 34.615 | 260 | 92 | 7 | 53 | 288 | 61 | 266 | 1.44e-38 | 137 |
| MS.gene98746.t1 | MTR_8g023790 | 33.205 | 259 | 95 | 5 | 53 | 287 | 62 | 266 | 9.28e-35 | 127 |
| MS.gene98746.t1 | MTR_3g101670 | 30.795 | 302 | 131 | 5 | 13 | 289 | 17 | 265 | 1.21e-34 | 126 |
| MS.gene98746.t1 | MTR_6g060175 | 33.452 | 281 | 116 | 10 | 35 | 289 | 47 | 282 | 1.82e-34 | 126 |
| MS.gene98746.t1 | MTR_3g435460 | 30.671 | 313 | 132 | 8 | 1 | 289 | 1 | 252 | 2.69e-31 | 117 |
| MS.gene98746.t1 | MTR_6g012110 | 33.446 | 296 | 136 | 10 | 3 | 281 | 2 | 253 | 7.38e-31 | 116 |
| MS.gene98746.t1 | MTR_6g012080 | 32.770 | 296 | 138 | 10 | 3 | 281 | 2 | 253 | 8.46e-31 | 116 |
| MS.gene98746.t1 | MTR_4g094605 | 34.228 | 298 | 132 | 11 | 3 | 281 | 2 | 254 | 2.44e-30 | 115 |
| MS.gene98746.t1 | MTR_6g011870 | 33.670 | 297 | 134 | 11 | 3 | 281 | 2 | 253 | 1.31e-29 | 113 |
| MS.gene98746.t1 | MTR_6g011880 | 33.670 | 297 | 134 | 11 | 3 | 281 | 2 | 253 | 2.02e-29 | 112 |
| MS.gene98746.t1 | MTR_2g081090 | 35.622 | 233 | 92 | 7 | 61 | 278 | 33 | 222 | 3.19e-29 | 111 |
| MS.gene98746.t1 | MTR_2g081090 | 35.622 | 233 | 92 | 7 | 61 | 278 | 60 | 249 | 4.19e-29 | 112 |
| MS.gene98746.t1 | MTR_6g011890 | 32.432 | 296 | 139 | 10 | 3 | 281 | 2 | 253 | 8.26e-29 | 111 |
| MS.gene98746.t1 | MTR_1g026550 | 31.111 | 315 | 139 | 12 | 5 | 288 | 62 | 329 | 1.20e-28 | 112 |
| MS.gene98746.t1 | MTR_2g008610 | 31.818 | 308 | 115 | 9 | 4 | 268 | 2 | 257 | 1.22e-28 | 110 |
| MS.gene98746.t1 | MTR_6g060175 | 31.673 | 281 | 111 | 10 | 35 | 289 | 47 | 272 | 1.33e-28 | 110 |
| MS.gene98746.t1 | MTR_5g097280 | 32.836 | 268 | 109 | 11 | 35 | 278 | 30 | 250 | 2.00e-26 | 104 |
| MS.gene98746.t1 | MTR_5g098785 | 29.710 | 276 | 122 | 7 | 39 | 286 | 43 | 274 | 1.88e-25 | 102 |
| MS.gene98746.t1 | MTR_5g098780 | 30.000 | 280 | 121 | 7 | 35 | 286 | 40 | 272 | 2.68e-25 | 102 |
| MS.gene98746.t1 | MTR_3g435460 | 37.017 | 181 | 75 | 5 | 132 | 289 | 27 | 191 | 2.75e-25 | 100 |
| MS.gene98746.t1 | MTR_6g043600 | 41.830 | 153 | 68 | 6 | 136 | 281 | 79 | 217 | 2.76e-23 | 95.5 |
| MS.gene98746.t1 | MTR_5g098770 | 45.070 | 71 | 39 | 0 | 216 | 286 | 21 | 91 | 2.89e-15 | 70.5 |
| MS.gene98746.t1 | MTR_2g436960 | 50.000 | 72 | 31 | 2 | 216 | 287 | 33 | 99 | 5.90e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98746.t1 | AT3G08940 | 87.004 | 277 | 33 | 2 | 14 | 289 | 13 | 287 | 2.39e-178 | 493 |
| MS.gene98746.t1 | AT5G01530 | 87.726 | 277 | 33 | 1 | 14 | 289 | 14 | 290 | 3.35e-174 | 483 |
| MS.gene98746.t1 | AT2G40100 | 70.189 | 265 | 74 | 2 | 12 | 272 | 10 | 273 | 1.25e-132 | 377 |
| MS.gene98746.t1 | AT3G08940 | 77.326 | 172 | 36 | 2 | 15 | 185 | 14 | 183 | 4.58e-90 | 267 |
| MS.gene98746.t1 | AT2G40100 | 64.024 | 164 | 55 | 1 | 12 | 171 | 10 | 173 | 3.21e-71 | 218 |
| MS.gene98746.t1 | AT3G54890 | 41.453 | 234 | 87 | 6 | 57 | 285 | 48 | 236 | 4.89e-47 | 158 |
| MS.gene98746.t1 | AT1G19150 | 33.846 | 260 | 94 | 6 | 53 | 288 | 64 | 269 | 5.35e-35 | 127 |
| MS.gene98746.t1 | AT4G10340 | 35.573 | 253 | 102 | 8 | 53 | 289 | 66 | 273 | 8.98e-35 | 127 |
| MS.gene98746.t1 | AT3G61470 | 33.977 | 259 | 93 | 6 | 53 | 287 | 51 | 255 | 1.28e-34 | 126 |
| MS.gene98746.t1 | AT1G45474 | 32.830 | 265 | 99 | 5 | 51 | 289 | 43 | 254 | 2.08e-34 | 125 |
| MS.gene98746.t1 | AT1G45474 | 32.830 | 265 | 99 | 5 | 51 | 289 | 43 | 254 | 2.08e-34 | 125 |
| MS.gene98746.t1 | AT2G34420 | 34.333 | 300 | 128 | 11 | 3 | 281 | 2 | 253 | 8.53e-33 | 121 |
| MS.gene98746.t1 | AT1G29930 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 1.73e-32 | 120 |
| MS.gene98746.t1 | AT1G29920 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 3.62e-32 | 120 |
| MS.gene98746.t1 | AT1G29910 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 3.62e-32 | 120 |
| MS.gene98746.t1 | AT1G76570 | 34.304 | 309 | 126 | 12 | 5 | 283 | 61 | 322 | 4.10e-32 | 121 |
| MS.gene98746.t1 | AT3G47470 | 30.645 | 310 | 129 | 8 | 4 | 287 | 2 | 251 | 7.46e-32 | 119 |
| MS.gene98746.t1 | AT3G54890 | 37.629 | 194 | 72 | 5 | 57 | 246 | 48 | 196 | 1.49e-30 | 114 |
| MS.gene98746.t1 | AT5G54270 | 33.696 | 276 | 108 | 8 | 35 | 278 | 18 | 250 | 1.94e-30 | 115 |
| MS.gene98746.t1 | AT2G34430 | 44.785 | 163 | 74 | 6 | 134 | 281 | 93 | 254 | 6.03e-30 | 114 |
| MS.gene98746.t1 | AT1G15820 | 33.704 | 270 | 75 | 9 | 40 | 268 | 48 | 254 | 4.36e-29 | 111 |
| MS.gene98746.t1 | AT1G61520 | 30.435 | 276 | 119 | 7 | 39 | 286 | 40 | 270 | 6.20e-28 | 108 |
| MS.gene98746.t1 | AT1G61520 | 30.435 | 276 | 119 | 7 | 39 | 286 | 40 | 270 | 6.20e-28 | 108 |
| MS.gene98746.t1 | AT2G05070 | 33.108 | 296 | 125 | 13 | 7 | 278 | 4 | 250 | 2.32e-27 | 107 |
| MS.gene98746.t1 | AT2G05100 | 34.363 | 259 | 96 | 11 | 47 | 278 | 39 | 250 | 1.80e-26 | 105 |
| MS.gene98746.t1 | AT3G27690 | 33.110 | 299 | 130 | 13 | 3 | 278 | 32 | 283 | 3.07e-26 | 105 |
| MS.gene98746.t1 | AT3G27690 | 33.220 | 295 | 127 | 13 | 7 | 278 | 4 | 251 | 7.65e-26 | 103 |
| MS.gene98746.t1 | AT1G61520 | 29.388 | 245 | 102 | 6 | 70 | 286 | 14 | 215 | 1.97e-20 | 87.8 |
| MS.gene98746.t1 | AT2G05100 | 32.927 | 246 | 91 | 11 | 47 | 265 | 39 | 237 | 2.36e-19 | 86.7 |
| MS.gene98746.t1 | AT5G28450 | 45.783 | 83 | 44 | 1 | 206 | 287 | 89 | 171 | 6.22e-14 | 68.9 |
Find 89 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATCTTGATGGTTTCTT+TGG | 0.159376 | 4.3:+82956020 | None:intergenic |
| CTTACTGTTGAATGGCTTAC+TGG | 0.215175 | 4.3:-82955400 | MS.gene98746:CDS |
| CAGCCTTACAGTGAAGTATT+TGG | 0.222406 | 4.3:-82955490 | MS.gene98746:CDS |
| TATTTGGACTTCAGAGGTTT+AGG | 0.232272 | 4.3:-82955474 | MS.gene98746:CDS |
| CGACTCGCTTGATCAGAATT+TGG | 0.240362 | 4.3:-82955581 | MS.gene98746:CDS |
| GGAAGTTTGGTCGGAGATTA+CGG | 0.284629 | 4.3:-82955655 | MS.gene98746:CDS |
| GGCTGCAGCGGTGGCGGTTG+CGG | 0.291908 | 4.3:+82956136 | None:intergenic |
| TGGATCGAAGTTCTAGTAAT+TGG | 0.298063 | 4.3:-82954543 | MS.gene98746:CDS |
| GGATTTGATCCATTTGGTTT+GGG | 0.302182 | 4.3:-82955634 | MS.gene98746:CDS |
| TCTCTATCACAACACTTATC+TGG | 0.311866 | 4.3:-82954563 | MS.gene98746:CDS |
| CGGATTTGATCCATTTGGTT+TGG | 0.331501 | 4.3:-82955635 | MS.gene98746:CDS |
| ACTTCACTGTAAGGCTGAAA+TGG | 0.355377 | 4.3:+82955496 | None:intergenic |
| CTTGCTATGGTTGCTTTCCT+TGG | 0.358398 | 4.3:-82954378 | MS.gene98746:CDS |
| ATTTGGACTTCAGAGGTTTA+GGG | 0.363642 | 4.3:-82955473 | MS.gene98746:CDS |
| GTAAAGGACCACTTAACAAT+TGG | 0.364076 | 4.3:-82954329 | MS.gene98746:CDS |
| CACTCCGGTGACTTTGCTCC+GGG | 0.367189 | 4.3:+82955685 | None:intergenic |
| TCTTCTTTCCAAAGCCGAAT+CGG | 0.368119 | 4.3:+82956051 | None:intergenic |
| GGCTTGGATCCTACCCGAAT+TGG | 0.370873 | 4.3:+82956073 | None:intergenic |
| TTTCAGGTTGAGCTAGTAGA+AGG | 0.373969 | 4.3:-82954615 | MS.gene98746:intron |
| TTCCAAAGCCGAATCGGGCT+TGG | 0.378185 | 4.3:+82956057 | None:intergenic |
| ATCCAAGCCCGATTCGGCTT+TGG | 0.380468 | 4.3:-82956059 | MS.gene98746:CDS |
| TTTGCTCCGGGGTACCATAA+TGG | 0.383572 | 4.3:+82955697 | None:intergenic |
| CTTCTTTCCAAAGCCGAATC+GGG | 0.391044 | 4.3:+82956052 | None:intergenic |
| GTGAGTTGATTCATGGTAGA+TGG | 0.391291 | 4.3:-82955447 | MS.gene98746:CDS |
| GATTACGGATTTGATCCATT+TGG | 0.397788 | 4.3:-82955640 | MS.gene98746:CDS |
| AGGGAATGTGAGTTGATTCA+TGG | 0.400554 | 4.3:-82955454 | MS.gene98746:CDS |
| AAAGAAAGCAACACTTCAAT+TGG | 0.404848 | 4.3:-82954421 | MS.gene98746:CDS |
| CCGCGAAGTTCAATCCAATT+CGG | 0.405011 | 4.3:-82956087 | MS.gene98746:CDS |
| CGCGAAGTTCAATCCAATTC+GGG | 0.412313 | 4.3:-82956086 | MS.gene98746:CDS |
| TTGGTGCTCTTACTGTTGAA+TGG | 0.414634 | 4.3:-82955408 | MS.gene98746:CDS |
| CATCAAGCTCAGCATTTCTC+TGG | 0.414677 | 4.3:+82954508 | None:intergenic |
| GTACTGGGACTTGATCTTGA+TGG | 0.416331 | 4.3:+82956011 | None:intergenic |
| GCTGTTCAAGCTGCTGCTAC+TGG | 0.427306 | 4.3:-82954351 | MS.gene98746:CDS |
| GTAGAAGGATCAACATATCT+TGG | 0.431470 | 4.3:-82954600 | MS.gene98746:CDS |
| CCACTCCGGTGACTTTGCTC+CGG | 0.432695 | 4.3:+82955684 | None:intergenic |
| TGGGCTATGCTTGCTACTCT+TGG | 0.438475 | 4.3:-82955427 | MS.gene98746:CDS |
| CCGGAGATGTGATCGGAACT+AGG | 0.444206 | 4.3:-82955546 | MS.gene98746:CDS |
| GGAGTGGCTAGACGGAAGTT+TGG | 0.446982 | 4.3:-82955668 | MS.gene98746:CDS |
| CAAGCTGCTGCTACTGGTAA+AGG | 0.448841 | 4.3:-82954345 | MS.gene98746:CDS |
| GGTAGGATCCAAGCCCGATT+CGG | 0.454874 | 4.3:-82956065 | MS.gene98746:CDS |
| GGAAAATTCTTTGACCCACT+TGG | 0.458494 | 4.3:-82954462 | MS.gene98746:CDS |
| AATTTGGCGAAGAATCTTGC+CGG | 0.462568 | 4.3:-82955565 | MS.gene98746:CDS |
| CAGGTACTGATCGTCCATTA+TGG | 0.471652 | 4.3:-82955711 | MS.gene98746:CDS |
| TGGATTGAACTTCGCGGAGG+CGG | 0.476462 | 4.3:+82956093 | None:intergenic |
| ATAAGTGTTGTGATAGAGAA+TGG | 0.479242 | 4.3:+82954567 | None:intergenic |
| GGAAGAAAAGGTATCAATGA+TGG | 0.486648 | 4.3:+82954275 | None:intergenic |
| TGCAGCGGTGGCGGTTGCGG+CGG | 0.492945 | 4.3:+82956139 | None:intergenic |
| CAAGAACTAAGAGGAAGAAA+AGG | 0.500205 | 4.3:+82954263 | None:intergenic |
| GCTGGTTTCCCCAAACCAAA+TGG | 0.504445 | 4.3:+82955625 | None:intergenic |
| GGATTGAACTTCGCGGAGGC+GGG | 0.511648 | 4.3:+82956094 | None:intergenic |
| CCTAGTTCCGATCACATCTC+CGG | 0.525368 | 4.3:+82955546 | None:intergenic |
| TAAAGGACCACTTAACAATT+GGG | 0.525889 | 4.3:-82954328 | MS.gene98746:CDS |
| GGTGTTACATGGCAAGATGC+TGG | 0.526008 | 4.3:-82955379 | MS.gene98746:CDS |
| AGTCCAAATACTTCACTGTA+AGG | 0.530759 | 4.3:+82955487 | None:intergenic |
| TGAAGTGGCTGCAGCGGTGG+CGG | 0.531682 | 4.3:+82956130 | None:intergenic |
| TGAGTAGCCCAATTGTTAAG+TGG | 0.534802 | 4.3:+82954321 | None:intergenic |
| TGAGTTAATCAAGAACTAAG+AGG | 0.538848 | 4.3:+82954254 | None:intergenic |
| AATGGCTTACTGGTGTTACA+TGG | 0.542824 | 4.3:-82955390 | MS.gene98746:CDS |
| CAAACATGCTCGTCTTGCTA+TGG | 0.544135 | 4.3:-82954391 | MS.gene98746:CDS |
| CCGAATTGGATTGAACTTCG+CGG | 0.551574 | 4.3:+82956087 | None:intergenic |
| TCAAATTGCAAATACTCCGC+TGG | 0.554662 | 4.3:+82955607 | None:intergenic |
| TGGCTAGACGGAAGTTTGGT+CGG | 0.562317 | 4.3:-82955664 | MS.gene98746:CDS |
| AGATGTGATCGGAACTAGGA+CGG | 0.563578 | 4.3:-82955542 | MS.gene98746:CDS |
| GATTTGATCCATTTGGTTTG+GGG | 0.565681 | 4.3:-82955633 | MS.gene98746:CDS |
| GTGAAGTATTTGGACTTCAG+AGG | 0.565781 | 4.3:-82955480 | MS.gene98746:CDS |
| TGATGAAGTGGCTGCAGCGG+TGG | 0.581298 | 4.3:+82956127 | None:intergenic |
| AATCTTGCCGGAGATGTGAT+CGG | 0.588189 | 4.3:-82955553 | MS.gene98746:CDS |
| TGAGTTGATTCATGGTAGAT+GGG | 0.603160 | 4.3:-82955446 | MS.gene98746:CDS |
| ATTTGGTTTGGGGAAACCAG+CGG | 0.603481 | 4.3:-82955623 | MS.gene98746:CDS |
| TACATGGCAAGATGCTGGAA+AGG | 0.603751 | 4.3:-82955374 | MS.gene98746:intron |
| AAGTCACCGGAGTGGCTAGA+CGG | 0.609847 | 4.3:-82955676 | MS.gene98746:CDS |
| GCAGCCACTTCATCATTCAT+CGG | 0.611200 | 4.3:-82956119 | MS.gene98746:CDS |
| GTTGTGATAGAGAATGGAAG+TGG | 0.611749 | 4.3:+82954573 | None:intergenic |
| AAACTTCCGTCTAGCCACTC+CGG | 0.616068 | 4.3:+82955670 | None:intergenic |
| GTACCCCGGAGCAAAGTCAC+CGG | 0.620014 | 4.3:-82955689 | MS.gene98746:CDS |
| TCTTGATGGTTTCTTTGGTG+CGG | 0.621232 | 4.3:+82956025 | None:intergenic |
| TCAATGATGGTAGTGTGAAG+AGG | 0.631393 | 4.3:+82954288 | None:intergenic |
| GGTCAGATGCTAAGCCAAGT+GGG | 0.631916 | 4.3:+82954448 | None:intergenic |
| GGGTCAGATGCTAAGCCAAG+TGG | 0.635931 | 4.3:+82954447 | None:intergenic |
| CAGCTTGAACAGCAAAACCA+AGG | 0.638361 | 4.3:+82954361 | None:intergenic |
| GAATGATGAAGTGGCTGCAG+CGG | 0.651301 | 4.3:+82956124 | None:intergenic |
| AAGTTCAATCCAATTCGGGT+AGG | 0.656773 | 4.3:-82956082 | MS.gene98746:CDS |
| GGTGCCGATGAATGATGAAG+TGG | 0.658626 | 4.3:+82956115 | None:intergenic |
| GATCGTCCATTATGGTACCC+CGG | 0.673771 | 4.3:-82955703 | MS.gene98746:CDS |
| CCGGAGCAAAGTCACCGGAG+TGG | 0.687601 | 4.3:-82955684 | MS.gene98746:CDS |
| ACTCCGGTGACTTTGCTCCG+GGG | 0.699763 | 4.3:+82955686 | None:intergenic |
| AATTGGATTGAACTTCGCGG+AGG | 0.719272 | 4.3:+82956090 | None:intergenic |
| GAAAAGAGACTATACCCAGG+TGG | 0.723166 | 4.3:-82954483 | MS.gene98746:CDS |
| GCAGAAAAGAGACTATACCC+AGG | 0.746677 | 4.3:-82954486 | MS.gene98746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTTATTTTTA+GGG | - | chr4.3:82955247-82955266 | MS.gene98746:intron | 0.0% |
| !!! | TTTTTATTTTTTTTATTTTT+AGG | - | chr4.3:82955246-82955265 | MS.gene98746:intron | 0.0% |
| !! | AAAGAAGATTAAAAAATTAT+TGG | - | chr4.3:82955618-82955637 | MS.gene98746:CDS | 10.0% |
| !!! | TTTTTCTTTTTACATTATAT+TGG | - | chr4.3:82955584-82955603 | MS.gene98746:CDS | 10.0% |
| !! | AATCTTTAATTATATCTAAC+AGG | - | chr4.3:82954682-82954701 | MS.gene98746:intron | 15.0% |
| !! | TATTAGTTATAATTAGTTGA+TGG | - | chr4.3:82954490-82954509 | MS.gene98746:CDS | 15.0% |
| !! | TTTCATTATCATATAATATG+AGG | - | chr4.3:82955700-82955719 | MS.gene98746:CDS | 15.0% |
| !!! | AAATCTTACTAAACTATTTT+AGG | + | chr4.3:82955444-82955463 | None:intergenic | 15.0% |
| !!! | AAATTTTGGTATAATTTTTC+AGG | - | chr4.3:82955781-82955800 | MS.gene98746:intron | 15.0% |
| !!! | CATGTTTTATGTTTTTTTTA+TGG | - | chr4.3:82955298-82955317 | MS.gene98746:intron | 15.0% |
| !!! | TTCACTAAATTATGAAATTT+TGG | - | chr4.3:82955767-82955786 | MS.gene98746:intron | 15.0% |
| !! | AAAAAAGAATATCATACTAG+TGG | - | chr4.3:82954582-82954601 | MS.gene98746:CDS | 20.0% |
| !! | ATTACAAACATTATATCACA+TGG | - | chr4.3:82955492-82955511 | MS.gene98746:CDS | 20.0% |
| !! | TTAATTATATCTAACGTACT+GGG | + | chr4.3:82954419-82954438 | None:intergenic | 20.0% |
| !! | TTTAATTATATCTAACGTAC+TGG | + | chr4.3:82954420-82954439 | None:intergenic | 20.0% |
| !!! | AAGTAAGAAAATAGGTTTTA+TGG | - | chr4.3:82955517-82955536 | MS.gene98746:CDS | 20.0% |
| !!! | TTTATGTTTGTTTTGTATAG+AGG | - | chr4.3:82955366-82955385 | MS.gene98746:intron | 20.0% |
| ! | AATCAAAATGCTTCAAGATA+TGG | + | chr4.3:82955557-82955576 | None:intergenic | 25.0% |
| !! | AGTAACTAACTTGTGTAAAA+AGG | - | chr4.3:82954606-82954625 | MS.gene98746:CDS | 25.0% |
| !! | ATTTCTAAGAGTTTATAGCA+AGG | + | chr4.3:82955727-82955746 | None:intergenic | 25.0% |
| AAAGAAAGCAACACTTCAAT+TGG | - | chr4.3:82955991-82956010 | MS.gene98746:intron | 30.0% | |
| ACATGGTCAAGTAAGAAAAT+AGG | - | chr4.3:82955509-82955528 | MS.gene98746:CDS | 30.0% | |
| GTATAGAGGATAAAAGATAG+TGG | - | chr4.3:82955380-82955399 | MS.gene98746:CDS | 30.0% | |
| GTCTTTAATTCAAGTGTGTT+TGG | - | chr4.3:82955164-82955183 | MS.gene98746:intron | 30.0% | |
| TAAAGGACCACTTAACAATT+GGG | - | chr4.3:82956084-82956103 | MS.gene98746:CDS | 30.0% | |
| ! | ATAAGTGTTGTGATAGAGAA+TGG | + | chr4.3:82955848-82955867 | None:intergenic | 30.0% |
| AGTCCAAATACTTCACTGTA+AGG | + | chr4.3:82954928-82954947 | None:intergenic | 35.0% | |
| ATTTGGACTTCAGAGGTTTA+GGG | - | chr4.3:82954939-82954958 | MS.gene98746:intron | 35.0% | |
| GATTACGGATTTGATCCATT+TGG | - | chr4.3:82954772-82954791 | MS.gene98746:intron | 35.0% | |
| GTAAAGGACCACTTAACAAT+TGG | - | chr4.3:82956083-82956102 | MS.gene98746:CDS | 35.0% | |
| GTAGAAGGATCAACATATCT+TGG | - | chr4.3:82955812-82955831 | MS.gene98746:intron | 35.0% | |
| TAATTCAAGTGTGTTTGGCT+CGG | - | chr4.3:82955169-82955188 | MS.gene98746:intron | 35.0% | |
| TATTTGGACTTCAGAGGTTT+AGG | - | chr4.3:82954938-82954957 | MS.gene98746:intron | 35.0% | |
| TCTCTATCACAACACTTATC+TGG | - | chr4.3:82955849-82955868 | MS.gene98746:intron | 35.0% | |
| ! | CTTGATCTTGATGGTTTCTT+TGG | + | chr4.3:82954395-82954414 | None:intergenic | 35.0% |
| ! | GGATTTGATCCATTTGGTTT+GGG | - | chr4.3:82954778-82954797 | MS.gene98746:intron | 35.0% |
| ! | TGGATCGAAGTTCTAGTAAT+TGG | - | chr4.3:82955869-82955888 | MS.gene98746:intron | 35.0% |
| !! | GATTTGATCCATTTGGTTTG+GGG | - | chr4.3:82954779-82954798 | MS.gene98746:intron | 35.0% |
| !! | GGAAGAAAAGGTATCAATGA+TGG | + | chr4.3:82956140-82956159 | None:intergenic | 35.0% |
| !! | TGAGTTGATTCATGGTAGAT+GGG | - | chr4.3:82954966-82954985 | MS.gene98746:intron | 35.0% |
| !!! | GAAGTGTTGCTTTCTTTTCT+GGG | + | chr4.3:82955988-82956007 | None:intergenic | 35.0% |
| !!! | TGAAGTGTTGCTTTCTTTTC+TGG | + | chr4.3:82955989-82956008 | None:intergenic | 35.0% |
| AAGTTCAATCCAATTCGGGT+AGG | - | chr4.3:82954330-82954349 | MS.gene98746:CDS | 40.0% | |
| AATTTGGCGAAGAATCTTGC+CGG | - | chr4.3:82954847-82954866 | MS.gene98746:intron | 40.0% | |
| ACTTCACTGTAAGGCTGAAA+TGG | + | chr4.3:82954919-82954938 | None:intergenic | 40.0% | |
| CGGATTTGATCCATTTGGTT+TGG | - | chr4.3:82954777-82954796 | MS.gene98746:intron | 40.0% | |
| CTTACTGTTGAATGGCTTAC+TGG | - | chr4.3:82955012-82955031 | MS.gene98746:intron | 40.0% | |
| GGAAAATTCTTTGACCCACT+TGG | - | chr4.3:82955950-82955969 | MS.gene98746:intron | 40.0% | |
| GTTGTGATAGAGAATGGAAG+TGG | + | chr4.3:82955842-82955861 | None:intergenic | 40.0% | |
| TCAAATTGCAAATACTCCGC+TGG | + | chr4.3:82954808-82954827 | None:intergenic | 40.0% | |
| TCTTCTTTCCAAAGCCGAAT+CGG | + | chr4.3:82954364-82954383 | None:intergenic | 40.0% | |
| TGAGTAGCCCAATTGTTAAG+TGG | + | chr4.3:82956094-82956113 | None:intergenic | 40.0% | |
| ! | CAGCCTTACAGTGAAGTATT+TGG | - | chr4.3:82954922-82954941 | MS.gene98746:intron | 40.0% |
| ! | GGTCAAAGAATTTTCCACCT+GGG | + | chr4.3:82955946-82955965 | None:intergenic | 40.0% |
| ! | GTGAAGTATTTGGACTTCAG+AGG | - | chr4.3:82954932-82954951 | MS.gene98746:intron | 40.0% |
| ! | TCAATGATGGTAGTGTGAAG+AGG | + | chr4.3:82956127-82956146 | None:intergenic | 40.0% |
| ! | TCTTGATGGTTTCTTTGGTG+CGG | + | chr4.3:82954390-82954409 | None:intergenic | 40.0% |
| ! | TTGGTGCTCTTACTGTTGAA+TGG | - | chr4.3:82955004-82955023 | MS.gene98746:intron | 40.0% |
| !! | AATGGCTTACTGGTGTTACA+TGG | - | chr4.3:82955022-82955041 | MS.gene98746:intron | 40.0% |
| !! | AGGGAATGTGAGTTGATTCA+TGG | - | chr4.3:82954958-82954977 | MS.gene98746:intron | 40.0% |
| !! | GTGAGTTGATTCATGGTAGA+TGG | - | chr4.3:82954965-82954984 | MS.gene98746:intron | 40.0% |
| !! | TTTCAGGTTGAGCTAGTAGA+AGG | - | chr4.3:82955797-82955816 | MS.gene98746:intron | 40.0% |
| AATCTTGCCGGAGATGTGAT+CGG | - | chr4.3:82954859-82954878 | MS.gene98746:intron | 45.0% | |
| AATTGGATTGAACTTCGCGG+AGG | + | chr4.3:82954325-82954344 | None:intergenic | 45.0% | |
| AGATGTGATCGGAACTAGGA+CGG | - | chr4.3:82954870-82954889 | MS.gene98746:intron | 45.0% | |
| CAAACATGCTCGTCTTGCTA+TGG | - | chr4.3:82956021-82956040 | MS.gene98746:CDS | 45.0% | |
| CAGCTTGAACAGCAAAACCA+AGG | + | chr4.3:82956054-82956073 | None:intergenic | 45.0% | |
| CATCAAGCTCAGCATTTCTC+TGG | + | chr4.3:82955907-82955926 | None:intergenic | 45.0% | |
| CCGAATTGGATTGAACTTCG+CGG | + | chr4.3:82954328-82954347 | None:intergenic | 45.0% | |
| CCGCGAAGTTCAATCCAATT+CGG | - | chr4.3:82954325-82954344 | MS.gene98746:CDS | 45.0% | |
| CGACTCGCTTGATCAGAATT+TGG | - | chr4.3:82954831-82954850 | MS.gene98746:intron | 45.0% | |
| CGCGAAGTTCAATCCAATTC+GGG | - | chr4.3:82954326-82954345 | MS.gene98746:CDS | 45.0% | |
| CTTCTTTCCAAAGCCGAATC+GGG | + | chr4.3:82954363-82954382 | None:intergenic | 45.0% | |
| GAAAAGAGACTATACCCAGG+TGG | - | chr4.3:82955929-82955948 | MS.gene98746:intron | 45.0% | |
| GCAGAAAAGAGACTATACCC+AGG | - | chr4.3:82955926-82955945 | MS.gene98746:intron | 45.0% | |
| GCAGCCACTTCATCATTCAT+CGG | - | chr4.3:82954293-82954312 | MS.gene98746:CDS | 45.0% | |
| GGAAGTTTGGTCGGAGATTA+CGG | - | chr4.3:82954757-82954776 | MS.gene98746:intron | 45.0% | |
| GTACTGGGACTTGATCTTGA+TGG | + | chr4.3:82954404-82954423 | None:intergenic | 45.0% | |
| TACATGGCAAGATGCTGGAA+AGG | - | chr4.3:82955038-82955057 | MS.gene98746:intron | 45.0% | |
| ! | CTTGCTATGGTTGCTTTCCT+TGG | - | chr4.3:82956034-82956053 | MS.gene98746:CDS | 45.0% |
| ! | GGGTCAAAGAATTTTCCACC+TGG | + | chr4.3:82955947-82955966 | None:intergenic | 45.0% |
| !! | ATTTGGTTTGGGGAAACCAG+CGG | - | chr4.3:82954789-82954808 | MS.gene98746:intron | 45.0% |
| !! | CAGGTACTGATCGTCCATTA+TGG | - | chr4.3:82954701-82954720 | MS.gene98746:intron | 45.0% |
| AAACTTCCGTCTAGCCACTC+CGG | + | chr4.3:82954745-82954764 | None:intergenic | 50.0% | |
| CAAGCTGCTGCTACTGGTAA+AGG | - | chr4.3:82956067-82956086 | MS.gene98746:CDS | 50.0% | |
| CCTAGTTCCGATCACATCTC+CGG | + | chr4.3:82954869-82954888 | None:intergenic | 50.0% | |
| GAATGATGAAGTGGCTGCAG+CGG | + | chr4.3:82954291-82954310 | None:intergenic | 50.0% | |
| GATCGTCCATTATGGTACCC+CGG | - | chr4.3:82954709-82954728 | MS.gene98746:intron | 50.0% | |
| GGTCAGATGCTAAGCCAAGT+GGG | + | chr4.3:82955967-82955986 | None:intergenic | 50.0% | |
| TGGCTAGACGGAAGTTTGGT+CGG | - | chr4.3:82954748-82954767 | MS.gene98746:intron | 50.0% | |
| ! | GCTGGTTTCCCCAAACCAAA+TGG | + | chr4.3:82954790-82954809 | None:intergenic | 50.0% |
| ! | GGTGTTACATGGCAAGATGC+TGG | - | chr4.3:82955033-82955052 | MS.gene98746:intron | 50.0% |
| ! | TGGGCTATGCTTGCTACTCT+TGG | - | chr4.3:82954985-82955004 | MS.gene98746:intron | 50.0% |
| ! | TTTGCTCCGGGGTACCATAA+TGG | + | chr4.3:82954718-82954737 | None:intergenic | 50.0% |
| !! | GGTGCCGATGAATGATGAAG+TGG | + | chr4.3:82954300-82954319 | None:intergenic | 50.0% |
| AAGTCACCGGAGTGGCTAGA+CGG | - | chr4.3:82954736-82954755 | MS.gene98746:intron | 55.0% | |
| CCGGAGATGTGATCGGAACT+AGG | - | chr4.3:82954866-82954885 | MS.gene98746:intron | 55.0% | |
| GCTGTTCAAGCTGCTGCTAC+TGG | - | chr4.3:82956061-82956080 | MS.gene98746:CDS | 55.0% | |
| GGAGTGGCTAGACGGAAGTT+TGG | - | chr4.3:82954744-82954763 | MS.gene98746:intron | 55.0% | |
| GGCTTGGATCCTACCCGAAT+TGG | + | chr4.3:82954342-82954361 | None:intergenic | 55.0% | |
| GGGTCAGATGCTAAGCCAAG+TGG | + | chr4.3:82955968-82955987 | None:intergenic | 55.0% | |
| GGTAGGATCCAAGCCCGATT+CGG | - | chr4.3:82954347-82954366 | MS.gene98746:CDS | 55.0% | |
| TGGATTGAACTTCGCGGAGG+CGG | + | chr4.3:82954322-82954341 | None:intergenic | 55.0% | |
| TTCCAAAGCCGAATCGGGCT+TGG | + | chr4.3:82954358-82954377 | None:intergenic | 55.0% | |
| !! | ATCCAAGCCCGATTCGGCTT+TGG | - | chr4.3:82954353-82954372 | MS.gene98746:CDS | 55.0% |
| ACTCCGGTGACTTTGCTCCG+GGG | + | chr4.3:82954729-82954748 | None:intergenic | 60.0% | |
| CACTCCGGTGACTTTGCTCC+GGG | + | chr4.3:82954730-82954749 | None:intergenic | 60.0% | |
| CCACTCCGGTGACTTTGCTC+CGG | + | chr4.3:82954731-82954750 | None:intergenic | 60.0% | |
| GGATTGAACTTCGCGGAGGC+GGG | + | chr4.3:82954321-82954340 | None:intergenic | 60.0% | |
| GTACCCCGGAGCAAAGTCAC+CGG | - | chr4.3:82954723-82954742 | MS.gene98746:intron | 60.0% | |
| TGATGAAGTGGCTGCAGCGG+TGG | + | chr4.3:82954288-82954307 | None:intergenic | 60.0% | |
| CCGGAGCAAAGTCACCGGAG+TGG | - | chr4.3:82954728-82954747 | MS.gene98746:intron | 65.0% | |
| TGAAGTGGCTGCAGCGGTGG+CGG | + | chr4.3:82954285-82954304 | None:intergenic | 65.0% | |
| ! | GGCTGCAGCGGTGGCGGTTG+CGG | + | chr4.3:82954279-82954298 | None:intergenic | 75.0% |
| ! | TGCAGCGGTGGCGGTTGCGG+CGG | + | chr4.3:82954276-82954295 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 82954269 | 82956165 | 82954269 | ID=MS.gene98746 |
| chr4.3 | mRNA | 82954269 | 82956165 | 82954269 | ID=MS.gene98746.t1;Parent=MS.gene98746 |
| chr4.3 | exon | 82956015 | 82956165 | 82956015 | ID=MS.gene98746.t1.exon1;Parent=MS.gene98746.t1 |
| chr4.3 | CDS | 82956015 | 82956165 | 82956015 | ID=cds.MS.gene98746.t1;Parent=MS.gene98746.t1 |
| chr4.3 | exon | 82955375 | 82955730 | 82955375 | ID=MS.gene98746.t1.exon2;Parent=MS.gene98746.t1 |
| chr4.3 | CDS | 82955375 | 82955730 | 82955375 | ID=cds.MS.gene98746.t1;Parent=MS.gene98746.t1 |
| chr4.3 | exon | 82954269 | 82954631 | 82954269 | ID=MS.gene98746.t1.exon3;Parent=MS.gene98746.t1 |
| chr4.3 | CDS | 82954269 | 82954631 | 82954269 | ID=cds.MS.gene98746.t1;Parent=MS.gene98746.t1 |
| Gene Sequence |
| Protein sequence |
