Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46314.t1 | XP_013449830.1 | 94.9 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 2.40E-62 | 248.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46314.t1 | Q41387 | 58.0 | 138 | 55 | 2 | 1 | 136 | 1 | 137 | 3.5e-33 | 142.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46314.t1 | B7FHC2 | 94.9 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 1.7e-62 | 248.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene46314 | 0.839515 | 1.51E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene46314 | 0.840101 | 1.07E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene46314 | 0.865813 | 4.50E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene46314 | 0.86571 | 4.85E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene46314 | 0.804874 | 1.75E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene46314 | 0.894889 | 1.61E-75 | -1.69E-46 |
| MS.gene049320 | MS.gene46314 | 0.909563 | 4.96E-82 | -1.69E-46 |
| MS.gene04938 | MS.gene46314 | 0.809501 | 1.83E-50 | -1.69E-46 |
| MS.gene04939 | MS.gene46314 | 0.861802 | 7.94E-64 | -1.69E-46 |
| MS.gene049609 | MS.gene46314 | 0.803805 | 2.93E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene46314 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene46314 | 0.810093 | 1.37E-50 | -1.69E-46 |
| MS.gene049828 | MS.gene46314 | 0.818987 | 1.47E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene46314 | 0.832591 | 8.66E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene46314 | 0.9298 | 4.13E-93 | -1.69E-46 |
| MS.gene050165 | MS.gene46314 | 0.935416 | 8.77E-97 | -1.69E-46 |
| MS.gene050173 | MS.gene46314 | -0.810689 | 1.02E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene46314 | 0.89828 | 6.19E-77 | -1.69E-46 |
| MS.gene050444 | MS.gene46314 | 0.865158 | 7.24E-65 | -1.69E-46 |
| MS.gene050504 | MS.gene46314 | 0.890307 | 1.11E-73 | -1.69E-46 |
| MS.gene050518 | MS.gene46314 | 0.879957 | 8.15E-70 | -1.69E-46 |
| MS.gene050577 | MS.gene46314 | 0.822107 | 2.83E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene46314 | 0.904861 | 7.88E-80 | -1.69E-46 |
| MS.gene050675 | MS.gene46314 | 0.87843 | 2.83E-69 | -1.69E-46 |
| MS.gene050699 | MS.gene46314 | 0.875009 | 4.32E-68 | -1.69E-46 |
| MS.gene050767 | MS.gene46314 | 0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene050770 | MS.gene46314 | 0.833934 | 4.01E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene46314 | 0.843889 | 1.06E-58 | -1.69E-46 |
| MS.gene05079 | MS.gene46314 | -0.847435 | 1.16E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene46314 | 0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene050833 | MS.gene46314 | -0.810445 | 1.15E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene46314 | 0.854446 | 1.22E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene46314 | 0.889415 | 2.47E-73 | -1.69E-46 |
| MS.gene05100 | MS.gene46314 | 0.878641 | 2.38E-69 | -1.69E-46 |
| MS.gene051228 | MS.gene46314 | 0.88955 | 2.19E-73 | -1.69E-46 |
| MS.gene051317 | MS.gene46314 | 0.836762 | 7.74E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene46314 | 0.851076 | 1.12E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene46314 | 0.80782 | 4.19E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene46314 | 0.915244 | 7.41E-85 | -1.69E-46 |
| MS.gene051949 | MS.gene46314 | 0.866146 | 3.53E-65 | -1.69E-46 |
| MS.gene052164 | MS.gene46314 | 0.810151 | 1.33E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene46314 | 0.861396 | 1.06E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene46314 | 0.84502 | 5.27E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene46314 | 0.8522 | 5.40E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene46314 | 0.826839 | 2.18E-54 | -1.69E-46 |
| MS.gene052670 | MS.gene46314 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene052916 | MS.gene46314 | 0.830237 | 3.29E-55 | -1.69E-46 |
| MS.gene053009 | MS.gene46314 | 0.837393 | 5.34E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene46314 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene46314 | 0.862979 | 3.45E-64 | -1.69E-46 |
| MS.gene053284 | MS.gene46314 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene46314 | 0.862465 | 4.97E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene46314 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene46314 | 0.886581 | 3.02E-72 | -1.69E-46 |
| MS.gene053916 | MS.gene46314 | 0.849117 | 3.97E-60 | -1.69E-46 |
| MS.gene054374 | MS.gene46314 | 0.80391 | 2.78E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene46314 | 0.802243 | 6.15E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene46314 | 0.807475 | 4.97E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene46314 | 0.838757 | 2.38E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene46314 | 0.894106 | 3.37E-75 | -1.69E-46 |
| MS.gene05470 | MS.gene46314 | 0.826774 | 2.26E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene46314 | 0.88679 | 2.52E-72 | -1.69E-46 |
| MS.gene055154 | MS.gene46314 | -0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene46314 | 0.830836 | 2.35E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene46314 | 0.821734 | 3.45E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene46314 | 0.888486 | 5.66E-73 | -1.69E-46 |
| MS.gene055397 | MS.gene46314 | 0.865351 | 6.29E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene46314 | 0.872932 | 2.17E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene46314 | 0.866417 | 2.89E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene46314 | 0.828391 | 9.23E-55 | -1.69E-46 |
| MS.gene055634 | MS.gene46314 | 0.808225 | 3.44E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene46314 | 0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene46314 | 0.833559 | 4.97E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene46314 | 0.860316 | 2.25E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene46314 | 0.845509 | 3.89E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene46314 | 0.867998 | 9.05E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene46314 | 0.864306 | 1.34E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene46314 | 0.800695 | 1.28E-48 | -1.69E-46 |
| MS.gene05592 | MS.gene46314 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene055941 | MS.gene46314 | 0.82045 | 6.82E-53 | -1.69E-46 |
| MS.gene055956 | MS.gene46314 | -0.834414 | 3.04E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene46314 | 0.8146 | 1.42E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene46314 | 0.830751 | 2.46E-55 | -1.69E-46 |
| MS.gene056449 | MS.gene46314 | 0.811441 | 6.99E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene46314 | 0.836729 | 7.89E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene46314 | 0.83908 | 1.96E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene46314 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene46314 | 0.909603 | 4.74E-82 | -1.69E-46 |
| MS.gene056692 | MS.gene46314 | 0.824604 | 7.38E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene46314 | 0.80457 | 2.03E-49 | -1.69E-46 |
| MS.gene056903 | MS.gene46314 | 0.80278 | 4.77E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene46314 | 0.87536 | 3.28E-68 | -1.69E-46 |
| MS.gene057246 | MS.gene46314 | 0.888489 | 5.64E-73 | -1.69E-46 |
| MS.gene057416 | MS.gene46314 | 0.823832 | 1.12E-53 | -1.69E-46 |
| MS.gene05753 | MS.gene46314 | 0.824111 | 9.64E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene46314 | 0.82021 | 7.74E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene46314 | 0.800832 | 1.20E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene46314 | 0.888817 | 4.22E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene46314 | 0.828186 | 1.03E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene46314 | 0.819027 | 1.44E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene46314 | 0.876141 | 1.77E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene46314 | 0.867737 | 1.10E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene46314 | 0.895096 | 1.33E-75 | -1.69E-46 |
| MS.gene059023 | MS.gene46314 | 0.805478 | 1.31E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene46314 | 0.858281 | 9.18E-63 | -1.69E-46 |
| MS.gene059079 | MS.gene46314 | 0.822153 | 2.76E-53 | -1.69E-46 |
| MS.gene059102 | MS.gene46314 | -0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene46314 | 0.834825 | 2.40E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene46314 | 0.923176 | 3.75E-89 | -1.69E-46 |
| MS.gene059718 | MS.gene46314 | 0.862045 | 6.69E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene46314 | 0.826932 | 2.07E-54 | -1.69E-46 |
| MS.gene059858 | MS.gene46314 | 0.832807 | 7.66E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene46314 | 0.862014 | 6.84E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene46314 | 0.833985 | 3.89E-56 | -1.69E-46 |
| MS.gene060337 | MS.gene46314 | -0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene46314 | 0.843336 | 1.49E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene46314 | 0.853671 | 2.05E-61 | -1.69E-46 |
| MS.gene060727 | MS.gene46314 | 0.801509 | 8.71E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene46314 | 0.832339 | 1.00E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene46314 | 0.859537 | 3.86E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene46314 | 0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene46314 | 0.834123 | 3.59E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene46314 | 0.81741 | 3.35E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene46314 | 0.824964 | 6.07E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene46314 | 0.825785 | 3.88E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene46314 | 0.850244 | 1.92E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene46314 | 0.83779 | 4.22E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46314.t1 | MTR_7g096150 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 7.29e-83 | 239 |
| MS.gene46314.t1 | MTR_1g070495 | 73.984 | 123 | 31 | 1 | 15 | 136 | 15 | 137 | 3.49e-52 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46314.t1 | AT2G30570 | 57.664 | 137 | 53 | 3 | 1 | 136 | 1 | 133 | 2.27e-43 | 139 |
Find 47 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGAGGATGAAGATTC+TGG | 0.217541 | 7.3:+15205616 | MS.gene46314:CDS |
| TGGATCTTGTTTGGTGTCTT+TGG | 0.223893 | 7.3:+15205556 | MS.gene46314:CDS |
| TTGGTGTCTTTGGTCTTATA+TGG | 0.276875 | 7.3:+15205566 | MS.gene46314:CDS |
| CTTCTTGGTTGGATCTTGTT+TGG | 0.292250 | 7.3:+15205547 | MS.gene46314:CDS |
| GGACTTAGCAACAATCTTCT+TGG | 0.299425 | 7.3:+15205532 | MS.gene46314:CDS |
| CTTCCAACCTTAGCTATTGA+TGG | 0.334379 | 7.3:-15205343 | None:intergenic |
| GACCTGCTTCCTTGCACATC+AGG | 0.343789 | 7.3:-15205391 | None:intergenic |
| GAAGGAACTGGCCTTCCCTT+TGG | 0.386325 | 7.3:+15205511 | MS.gene46314:CDS |
| TCTACCAAAGCCATGGCTGC+TGG | 0.411412 | 7.3:-15205472 | None:intergenic |
| TGTTGAGGTGCCAGCAATAA+TGG | 0.413871 | 7.3:-15205157 | None:intergenic |
| AAAACTTACCAACAATGGTC+TGG | 0.428853 | 7.3:-15205233 | None:intergenic |
| AAAATGGCAACCATTATTGC+TGG | 0.451832 | 7.3:+15205147 | None:intergenic |
| AAGCCCAGCAGCCATGGCTT+TGG | 0.453307 | 7.3:+15205468 | MS.gene46314:CDS |
| TTAGCAACAATCTTCTTGGT+TGG | 0.463955 | 7.3:+15205536 | MS.gene46314:CDS |
| TTTGTGCACAAGCAACCTCT+TGG | 0.465311 | 7.3:+15205201 | MS.gene46314:CDS |
| AGAATGAGCACTGAAGGAAC+TGG | 0.491605 | 7.3:+15205499 | MS.gene46314:CDS |
| CTACCAAAGCCATGGCTGCT+GGG | 0.492560 | 7.3:-15205471 | None:intergenic |
| AGCAGAGATAGCTGCTATCA+AGG | 0.498626 | 7.3:-15205434 | None:intergenic |
| TTGATGAGGATGAAGATTCT+GGG | 0.502222 | 7.3:+15205617 | MS.gene46314:CDS |
| AGCAGGTCAAACATAGGAAT+GGG | 0.505396 | 7.3:+15205406 | MS.gene46314:CDS |
| CAGAATCTTCATCCTCATCA+AGG | 0.515447 | 7.3:-15205615 | None:intergenic |
| GTCCCATCCCAGACCATTGT+TGG | 0.518566 | 7.3:+15205225 | MS.gene46314:CDS |
| AACCTGATGTGCAAGGAAGC+AGG | 0.522854 | 7.3:+15205389 | MS.gene46314:CDS |
| CTTGTCAAGCCCAGCAGCCA+TGG | 0.525662 | 7.3:+15205462 | MS.gene46314:CDS |
| AGAGTGAGATGTTCCATTGA+GGG | 0.532339 | 7.3:+15205364 | MS.gene46314:CDS |
| AAACTTACCAACAATGGTCT+GGG | 0.543127 | 7.3:-15205232 | None:intergenic |
| AAGCAGGTCAAACATAGGAA+TGG | 0.548495 | 7.3:+15205405 | MS.gene46314:CDS |
| AAGATTGTTGCTAAGTCCAA+AGG | 0.554462 | 7.3:-15205527 | None:intergenic |
| CTACGCTTCCTCCCTTGATG+AGG | 0.562437 | 7.3:+15205603 | MS.gene46314:CDS |
| TACCAACAATGGTCTGGGAT+GGG | 0.563076 | 7.3:-15205227 | None:intergenic |
| TTGCCATCAATAGCTAAGGT+TGG | 0.567060 | 7.3:+15205340 | MS.gene46314:CDS |
| AGATTGTTGCTAAGTCCAAA+GGG | 0.569327 | 7.3:-15205526 | None:intergenic |
| TTACCAACAATGGTCTGGGA+TGG | 0.569922 | 7.3:-15205228 | None:intergenic |
| ACATCTTCAATCATCCGCAC+AGG | 0.569929 | 7.3:+15205177 | MS.gene46314:CDS |
| GATGAGAGAATGAGCACTGA+AGG | 0.576075 | 7.3:+15205493 | MS.gene46314:CDS |
| CATGGCTGCTGGGCTTGACA+AGG | 0.577276 | 7.3:-15205461 | None:intergenic |
| AGGATTGCCATCAATAGCTA+AGG | 0.584181 | 7.3:+15205336 | MS.gene46314:intron |
| AAGAGTGAGATGTTCCATTG+AGG | 0.585764 | 7.3:+15205363 | MS.gene46314:CDS |
| CAAGGAAGCAGGTCAAACAT+AGG | 0.586835 | 7.3:+15205400 | MS.gene46314:CDS |
| AGAATCTTCATCCTCATCAA+GGG | 0.614208 | 7.3:-15205614 | None:intergenic |
| GAGGGAAAACCTGATGTGCA+AGG | 0.626356 | 7.3:+15205382 | MS.gene46314:CDS |
| TCTCTCATCTACCAAAGCCA+TGG | 0.628797 | 7.3:-15205479 | None:intergenic |
| ATCTTCATCCTCATCAAGGG+AGG | 0.635880 | 7.3:-15205611 | None:intergenic |
| TGTTGCTAAGTCCAAAGGGA+AGG | 0.637762 | 7.3:-15205522 | None:intergenic |
| GCGGATGATTGAAGATGTTG+AGG | 0.660911 | 7.3:-15205172 | None:intergenic |
| GTCTGGGATGGGACTCCAAG+AGG | 0.664580 | 7.3:-15205216 | None:intergenic |
| GCTTGTGCACAAAACCTGTG+CGG | 0.820156 | 7.3:-15205191 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTCAAACATAAATTGTAT+AGG | + | chr7.3:15205316-15205335 | MS.gene46314:intron | 20.0% |
| ! | TTTGATGAAGATGAAATTGT+TGG | - | chr7.3:15205273-15205292 | None:intergenic | 25.0% |
| TAGGAAAAACTTACCAACAA+TGG | - | chr7.3:15205241-15205260 | None:intergenic | 30.0% | |
| ! | AAATTGTTGGTTGATTCACT+AGG | - | chr7.3:15205260-15205279 | None:intergenic | 30.0% |
| AAAACTTACCAACAATGGTC+TGG | - | chr7.3:15205236-15205255 | None:intergenic | 35.0% | |
| AAACTTACCAACAATGGTCT+GGG | - | chr7.3:15205235-15205254 | None:intergenic | 35.0% | |
| AAGATTGTTGCTAAGTCCAA+AGG | - | chr7.3:15205530-15205549 | None:intergenic | 35.0% | |
| AGAATCTTCATCCTCATCAA+GGG | - | chr7.3:15205617-15205636 | None:intergenic | 35.0% | |
| AGATTGTTGCTAAGTCCAAA+GGG | - | chr7.3:15205529-15205548 | None:intergenic | 35.0% | |
| TTAGCAACAATCTTCTTGGT+TGG | + | chr7.3:15205536-15205555 | MS.gene46314:CDS | 35.0% | |
| TTGATGAGGATGAAGATTCT+GGG | + | chr7.3:15205617-15205636 | MS.gene46314:CDS | 35.0% | |
| !! | TTGGTGTCTTTGGTCTTATA+TGG | + | chr7.3:15205566-15205585 | MS.gene46314:CDS | 35.0% |
| AAGAGTGAGATGTTCCATTG+AGG | + | chr7.3:15205363-15205382 | MS.gene46314:CDS | 40.0% | |
| AAGCAGGTCAAACATAGGAA+TGG | + | chr7.3:15205405-15205424 | MS.gene46314:CDS | 40.0% | |
| AGAGTGAGATGTTCCATTGA+GGG | + | chr7.3:15205364-15205383 | MS.gene46314:CDS | 40.0% | |
| AGCAGGTCAAACATAGGAAT+GGG | + | chr7.3:15205406-15205425 | MS.gene46314:CDS | 40.0% | |
| AGGATTGCCATCAATAGCTA+AGG | + | chr7.3:15205336-15205355 | MS.gene46314:intron | 40.0% | |
| CAGAATCTTCATCCTCATCA+AGG | - | chr7.3:15205618-15205637 | None:intergenic | 40.0% | |
| CTTCCAACCTTAGCTATTGA+TGG | - | chr7.3:15205346-15205365 | None:intergenic | 40.0% | |
| CTTCTTGGTTGGATCTTGTT+TGG | + | chr7.3:15205547-15205566 | MS.gene46314:CDS | 40.0% | |
| CTTGATGAGGATGAAGATTC+TGG | + | chr7.3:15205616-15205635 | MS.gene46314:CDS | 40.0% | |
| GGACTTAGCAACAATCTTCT+TGG | + | chr7.3:15205532-15205551 | MS.gene46314:CDS | 40.0% | |
| TTGCCATCAATAGCTAAGGT+TGG | + | chr7.3:15205340-15205359 | MS.gene46314:CDS | 40.0% | |
| !! | TGGATCTTGTTTGGTGTCTT+TGG | + | chr7.3:15205556-15205575 | MS.gene46314:CDS | 40.0% |
| ACATCTTCAATCATCCGCAC+AGG | + | chr7.3:15205177-15205196 | MS.gene46314:CDS | 45.0% | |
| AGCAGAGATAGCTGCTATCA+AGG | - | chr7.3:15205437-15205456 | None:intergenic | 45.0% | |
| ATCTTCATCCTCATCAAGGG+AGG | - | chr7.3:15205614-15205633 | None:intergenic | 45.0% | |
| CAAGGAAGCAGGTCAAACAT+AGG | + | chr7.3:15205400-15205419 | MS.gene46314:CDS | 45.0% | |
| GCGGATGATTGAAGATGTTG+AGG | - | chr7.3:15205175-15205194 | None:intergenic | 45.0% | |
| TCTCTCATCTACCAAAGCCA+TGG | - | chr7.3:15205482-15205501 | None:intergenic | 45.0% | |
| TGTTGCTAAGTCCAAAGGGA+AGG | - | chr7.3:15205525-15205544 | None:intergenic | 45.0% | |
| TTACCAACAATGGTCTGGGA+TGG | - | chr7.3:15205231-15205250 | None:intergenic | 45.0% | |
| TTTGTGCACAAGCAACCTCT+TGG | + | chr7.3:15205201-15205220 | MS.gene46314:CDS | 45.0% | |
| ! | CACATCAGGTTTTCCCTCAA+TGG | - | chr7.3:15205380-15205399 | None:intergenic | 45.0% |
| ! | TACCAACAATGGTCTGGGAT+GGG | - | chr7.3:15205230-15205249 | None:intergenic | 45.0% |
| ! | TGTTGAGGTGCCAGCAATAA+TGG | - | chr7.3:15205160-15205179 | None:intergenic | 45.0% |
| !! | AGAATGAGCACTGAAGGAAC+TGG | + | chr7.3:15205499-15205518 | MS.gene46314:CDS | 45.0% |
| !! | GATGAGAGAATGAGCACTGA+AGG | + | chr7.3:15205493-15205512 | MS.gene46314:CDS | 45.0% |
| AACCTGATGTGCAAGGAAGC+AGG | + | chr7.3:15205389-15205408 | MS.gene46314:CDS | 50.0% | |
| GAGGGAAAACCTGATGTGCA+AGG | + | chr7.3:15205382-15205401 | MS.gene46314:CDS | 50.0% | |
| GCTTGTGCACAAAACCTGTG+CGG | - | chr7.3:15205194-15205213 | None:intergenic | 50.0% | |
| CTACCAAAGCCATGGCTGCT+GGG | - | chr7.3:15205474-15205493 | None:intergenic | 55.0% | |
| CTACGCTTCCTCCCTTGATG+AGG | + | chr7.3:15205603-15205622 | MS.gene46314:CDS | 55.0% | |
| GACCTGCTTCCTTGCACATC+AGG | - | chr7.3:15205394-15205413 | None:intergenic | 55.0% | |
| GTCCCATCCCAGACCATTGT+TGG | + | chr7.3:15205225-15205244 | MS.gene46314:CDS | 55.0% | |
| TCTACCAAAGCCATGGCTGC+TGG | - | chr7.3:15205475-15205494 | None:intergenic | 55.0% | |
| !! | GAAGGAACTGGCCTTCCCTT+TGG | + | chr7.3:15205511-15205530 | MS.gene46314:CDS | 55.0% |
| AAGCCCAGCAGCCATGGCTT+TGG | + | chr7.3:15205468-15205487 | MS.gene46314:CDS | 60.0% | |
| CATGGCTGCTGGGCTTGACA+AGG | - | chr7.3:15205464-15205483 | None:intergenic | 60.0% | |
| CTTGTCAAGCCCAGCAGCCA+TGG | + | chr7.3:15205462-15205481 | MS.gene46314:CDS | 60.0% | |
| ! | GTCTGGGATGGGACTCCAAG+AGG | - | chr7.3:15205219-15205238 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 15205150 | 15205651 | 15205150 | ID=MS.gene46314 |
| chr7.3 | mRNA | 15205150 | 15205651 | 15205150 | ID=MS.gene46314.t1;Parent=MS.gene46314 |
| chr7.3 | exon | 15205150 | 15205246 | 15205150 | ID=MS.gene46314.t1.exon1;Parent=MS.gene46314.t1 |
| chr7.3 | CDS | 15205150 | 15205246 | 15205150 | ID=cds.MS.gene46314.t1;Parent=MS.gene46314.t1 |
| chr7.3 | exon | 15205338 | 15205651 | 15205338 | ID=MS.gene46314.t1.exon2;Parent=MS.gene46314.t1 |
| chr7.3 | CDS | 15205338 | 15205651 | 15205338 | ID=cds.MS.gene46314.t1;Parent=MS.gene46314.t1 |
| Gene Sequence |
| Protein sequence |
