Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65534.t1 | XP_013451624.1 | 97.5 | 242 | 3 | 1 | 1 | 239 | 1 | 242 | 7.10E-134 | 486.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65534.t1 | Q01667 | 82.4 | 239 | 40 | 2 | 1 | 237 | 1 | 239 | 5.4e-114 | 411.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65534.t1 | A0A072U7I8 | 97.5 | 242 | 3 | 1 | 1 | 239 | 1 | 242 | 5.1e-134 | 486.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene65534 | 0.866943 | 1.97E-65 | -1.69E-46 |
| MS.gene049173 | MS.gene65534 | 0.841666 | 4.14E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene65534 | 0.850171 | 2.02E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene65534 | 0.827895 | 1.22E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene65534 | 0.827576 | 1.45E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene65534 | 0.895753 | 7.10E-76 | -1.69E-46 |
| MS.gene049320 | MS.gene65534 | 0.882166 | 1.31E-70 | -1.69E-46 |
| MS.gene04938 | MS.gene65534 | 0.813645 | 2.31E-51 | -1.69E-46 |
| MS.gene04939 | MS.gene65534 | 0.8588 | 6.42E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene65534 | 0.807061 | 6.08E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene65534 | -0.809852 | 1.54E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene65534 | 0.837019 | 6.65E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene65534 | 0.858352 | 8.74E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene65534 | 0.878341 | 3.04E-69 | -1.69E-46 |
| MS.gene050165 | MS.gene65534 | 0.8876 | 1.24E-72 | -1.69E-46 |
| MS.gene050170 | MS.gene65534 | 0.818486 | 1.91E-52 | -1.69E-46 |
| MS.gene050173 | MS.gene65534 | -0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene65534 | 0.811571 | 6.55E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene65534 | 0.836534 | 8.84E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene65534 | 0.885506 | 7.67E-72 | -1.69E-46 |
| MS.gene050444 | MS.gene65534 | 0.870368 | 1.54E-66 | -1.69E-46 |
| MS.gene050475 | MS.gene65534 | -0.821704 | 3.50E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene65534 | 0.874083 | 8.91E-68 | -1.69E-46 |
| MS.gene050504 | MS.gene65534 | 0.891231 | 4.80E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene65534 | 0.862248 | 5.80E-64 | -1.69E-46 |
| MS.gene050541 | MS.gene65534 | -0.816463 | 5.46E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene65534 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene65534 | 0.908012 | 2.72E-81 | -1.69E-46 |
| MS.gene050675 | MS.gene65534 | 0.909227 | 7.19E-82 | -1.69E-46 |
| MS.gene050699 | MS.gene65534 | 0.889423 | 2.45E-73 | -1.69E-46 |
| MS.gene050772 | MS.gene65534 | 0.841143 | 5.68E-58 | -1.69E-46 |
| MS.gene05079 | MS.gene65534 | -0.837529 | 4.93E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene65534 | 0.816164 | 6.37E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene65534 | 0.831695 | 1.44E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene65534 | 0.828907 | 6.92E-55 | -1.69E-46 |
| MS.gene050876 | MS.gene65534 | 0.860583 | 1.87E-63 | -1.69E-46 |
| MS.gene050904 | MS.gene65534 | 0.823736 | 1.18E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene65534 | 0.906341 | 1.65E-80 | -1.69E-46 |
| MS.gene05100 | MS.gene65534 | 0.825061 | 5.76E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene65534 | -0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene65534 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene65534 | 0.822921 | 1.83E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene65534 | 0.848233 | 6.99E-60 | -1.69E-46 |
| MS.gene051364 | MS.gene65534 | -0.814289 | 1.66E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene65534 | -0.827745 | 1.32E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene65534 | 0.837846 | 4.08E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene65534 | 0.888451 | 5.84E-73 | -1.69E-46 |
| MS.gene051858 | MS.gene65534 | 0.81335 | 2.68E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene65534 | 0.883116 | 5.89E-71 | -1.69E-46 |
| MS.gene052129 | MS.gene65534 | -0.812752 | 3.62E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene65534 | 0.8045 | 2.10E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene65534 | 0.849457 | 3.20E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene65534 | 0.801509 | 8.71E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene65534 | 0.811367 | 7.26E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene65534 | 0.803475 | 3.43E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene65534 | 0.820505 | 6.62E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene65534 | 0.822547 | 2.23E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene65534 | 0.833206 | 6.09E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene65534 | 0.811232 | 7.76E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene65534 | 0.827323 | 1.67E-54 | -1.69E-46 |
| MS.gene053284 | MS.gene65534 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene65534 | 0.829069 | 6.33E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene65534 | -0.818011 | 2.45E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene65534 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene65534 | -0.822588 | 2.19E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene65534 | 0.850817 | 1.33E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene65534 | 0.8263 | 2.93E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene65534 | 0.83108 | 2.04E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene65534 | 0.81572 | 8.00E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene65534 | 0.847499 | 1.11E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene65534 | 0.862232 | 5.86E-64 | -1.69E-46 |
| MS.gene05470 | MS.gene65534 | 0.830692 | 2.55E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene65534 | 0.90606 | 2.22E-80 | -1.69E-46 |
| MS.gene054959 | MS.gene65534 | -0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene055204 | MS.gene65534 | -0.805227 | 1.48E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene65534 | 0.889698 | 1.92E-73 | -1.69E-46 |
| MS.gene055502 | MS.gene65534 | 0.87365 | 1.25E-67 | -1.69E-46 |
| MS.gene055577 | MS.gene65534 | 0.841223 | 5.41E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene65534 | 0.822616 | 2.15E-53 | -1.69E-46 |
| MS.gene055636 | MS.gene65534 | 0.815164 | 1.06E-51 | -1.69E-46 |
| MS.gene055638 | MS.gene65534 | 0.838821 | 2.29E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene65534 | 0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene65534 | 0.840762 | 7.15E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene65534 | 0.826523 | 2.59E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene65534 | 0.859676 | 3.51E-63 | -1.69E-46 |
| MS.gene055776 | MS.gene65534 | 0.89538 | 1.01E-75 | -1.69E-46 |
| MS.gene05589 | MS.gene65534 | 0.840561 | 8.08E-58 | -1.69E-46 |
| MS.gene055941 | MS.gene65534 | 0.830689 | 2.55E-55 | -1.69E-46 |
| MS.gene055942 | MS.gene65534 | -0.849137 | 3.92E-60 | -1.69E-46 |
| MS.gene056374 | MS.gene65534 | 0.808725 | 2.69E-50 | -1.69E-46 |
| MS.gene056405 | MS.gene65534 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene056449 | MS.gene65534 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene65534 | 0.878299 | 3.14E-69 | -1.69E-46 |
| MS.gene056510 | MS.gene65534 | 0.876435 | 1.40E-68 | -1.69E-46 |
| MS.gene056657 | MS.gene65534 | 0.887648 | 1.19E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene65534 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene65534 | 0.822613 | 2.16E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene65534 | 0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene65534 | -0.810249 | 1.27E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene65534 | -0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene65534 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene65534 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene65534 | 0.882056 | 1.43E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene65534 | 0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene65534 | 0.853424 | 2.41E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene65534 | 0.876617 | 1.21E-68 | -1.69E-46 |
| MS.gene058838 | MS.gene65534 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene058978 | MS.gene65534 | -0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene65534 | 0.910938 | 1.07E-82 | -1.69E-46 |
| MS.gene059023 | MS.gene65534 | 0.847604 | 1.04E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene65534 | 0.822473 | 2.32E-53 | -1.69E-46 |
| MS.gene05912 | MS.gene65534 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene65534 | 0.831994 | 1.22E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene65534 | 0.909286 | 6.74E-82 | -1.69E-46 |
| MS.gene059701 | MS.gene65534 | -0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene65534 | 0.86594 | 4.10E-65 | -1.69E-46 |
| MS.gene059756 | MS.gene65534 | 0.840294 | 9.48E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene65534 | 0.871349 | 7.31E-67 | -1.69E-46 |
| MS.gene059902 | MS.gene65534 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene060303 | MS.gene65534 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene060337 | MS.gene65534 | -0.843982 | 1.00E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene65534 | 0.804521 | 2.08E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene65534 | 0.876406 | 1.43E-68 | -1.69E-46 |
| MS.gene060762 | MS.gene65534 | 0.863576 | 2.26E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene65534 | 0.858437 | 8.24E-63 | -1.69E-46 |
| MS.gene06077 | MS.gene65534 | 0.848257 | 6.88E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene65534 | 0.843067 | 1.76E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene65534 | 0.838 | 3.73E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65534.t1 | MTR_6g033320 | 97.521 | 242 | 3 | 1 | 1 | 239 | 1 | 242 | 1.22e-175 | 482 |
| MS.gene65534.t1 | MTR_4g015570 | 37.354 | 257 | 110 | 6 | 22 | 231 | 30 | 282 | 5.49e-45 | 152 |
| MS.gene65534.t1 | MTR_3g435460 | 37.970 | 266 | 117 | 10 | 1 | 235 | 1 | 249 | 3.11e-42 | 144 |
| MS.gene65534.t1 | MTR_8g023790 | 40.284 | 211 | 98 | 7 | 46 | 237 | 66 | 267 | 1.74e-41 | 142 |
| MS.gene65534.t1 | MTR_3g101670 | 38.565 | 223 | 105 | 7 | 33 | 235 | 52 | 262 | 5.75e-41 | 141 |
| MS.gene65534.t1 | MTR_2g042720 | 40.976 | 205 | 93 | 7 | 46 | 231 | 65 | 260 | 2.63e-40 | 139 |
| MS.gene65534.t1 | MTR_6g060175 | 38.743 | 191 | 107 | 3 | 53 | 235 | 91 | 279 | 1.85e-37 | 132 |
| MS.gene65534.t1 | MTR_5g098780 | 37.959 | 245 | 116 | 9 | 16 | 231 | 31 | 268 | 2.91e-36 | 129 |
| MS.gene65534.t1 | MTR_6g011890 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 4.68e-36 | 128 |
| MS.gene65534.t1 | MTR_4g094605 | 43.147 | 197 | 91 | 7 | 49 | 230 | 64 | 254 | 4.70e-36 | 128 |
| MS.gene65534.t1 | MTR_6g011870 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 4.99e-36 | 128 |
| MS.gene65534.t1 | MTR_6g011880 | 42.487 | 193 | 91 | 6 | 53 | 230 | 66 | 253 | 4.99e-36 | 128 |
| MS.gene65534.t1 | MTR_3g435460 | 40.206 | 194 | 86 | 6 | 59 | 235 | 8 | 188 | 6.36e-36 | 126 |
| MS.gene65534.t1 | MTR_6g012110 | 41.885 | 191 | 95 | 6 | 53 | 230 | 66 | 253 | 1.23e-35 | 127 |
| MS.gene65534.t1 | MTR_6g012080 | 41.969 | 193 | 92 | 6 | 53 | 230 | 66 | 253 | 1.27e-35 | 127 |
| MS.gene65534.t1 | MTR_5g098785 | 38.710 | 248 | 112 | 10 | 16 | 231 | 31 | 270 | 6.38e-35 | 125 |
| MS.gene65534.t1 | MTR_5g097280 | 39.474 | 228 | 100 | 9 | 36 | 230 | 31 | 253 | 1.22e-34 | 125 |
| MS.gene65534.t1 | MTR_1g026550 | 39.000 | 200 | 100 | 6 | 53 | 231 | 125 | 323 | 1.09e-33 | 124 |
| MS.gene65534.t1 | MTR_6g043600 | 40.860 | 186 | 84 | 6 | 53 | 230 | 50 | 217 | 9.28e-32 | 116 |
| MS.gene65534.t1 | MTR_3g070340 | 34.091 | 220 | 97 | 5 | 46 | 221 | 60 | 275 | 1.32e-30 | 114 |
| MS.gene65534.t1 | MTR_6g060175 | 36.126 | 191 | 102 | 4 | 53 | 235 | 91 | 269 | 2.88e-30 | 114 |
| MS.gene65534.t1 | MTR_2g081090 | 37.104 | 221 | 110 | 9 | 36 | 230 | 35 | 252 | 9.05e-30 | 112 |
| MS.gene65534.t1 | MTR_2g081090 | 38.860 | 193 | 100 | 8 | 53 | 230 | 36 | 225 | 1.29e-28 | 108 |
| MS.gene65534.t1 | MTR_2g008610 | 33.846 | 195 | 79 | 6 | 46 | 201 | 60 | 243 | 3.78e-21 | 89.4 |
| MS.gene65534.t1 | MTR_5g098770 | 54.412 | 68 | 29 | 2 | 165 | 231 | 21 | 87 | 3.60e-16 | 72.0 |
| MS.gene65534.t1 | MTR_2g436960 | 46.479 | 71 | 33 | 2 | 165 | 235 | 33 | 98 | 1.28e-12 | 62.8 |
| MS.gene65534.t1 | MTR_0003s0060 | 47.143 | 70 | 32 | 2 | 162 | 231 | 23 | 87 | 1.74e-11 | 59.3 |
| MS.gene65534.t1 | MTR_1g026550 | 41.176 | 85 | 43 | 2 | 53 | 130 | 125 | 209 | 3.34e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65534.t1 | AT3G54890 | 82.427 | 239 | 40 | 2 | 1 | 237 | 1 | 239 | 1.08e-139 | 391 |
| MS.gene65534.t1 | AT3G54890 | 80.612 | 196 | 36 | 2 | 1 | 194 | 1 | 196 | 1.13e-107 | 309 |
| MS.gene65534.t1 | AT3G54890 | 69.038 | 239 | 38 | 3 | 1 | 237 | 1 | 205 | 2.03e-106 | 306 |
| MS.gene65534.t1 | AT3G54890 | 74.684 | 158 | 37 | 3 | 1 | 155 | 1 | 158 | 1.74e-72 | 218 |
| MS.gene65534.t1 | AT3G08940 | 37.736 | 265 | 112 | 7 | 16 | 231 | 20 | 280 | 1.38e-46 | 156 |
| MS.gene65534.t1 | AT3G47470 | 37.452 | 259 | 121 | 8 | 1 | 231 | 1 | 246 | 1.42e-44 | 150 |
| MS.gene65534.t1 | AT5G01530 | 39.076 | 238 | 94 | 6 | 41 | 231 | 50 | 283 | 3.89e-44 | 150 |
| MS.gene65534.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 44 | 236 | 47 | 252 | 3.06e-40 | 139 |
| MS.gene65534.t1 | AT1G45474 | 37.327 | 217 | 101 | 5 | 44 | 236 | 47 | 252 | 3.06e-40 | 139 |
| MS.gene65534.t1 | AT3G61470 | 39.810 | 211 | 99 | 7 | 46 | 237 | 55 | 256 | 4.19e-40 | 139 |
| MS.gene65534.t1 | AT2G40100 | 38.813 | 219 | 87 | 4 | 46 | 221 | 59 | 273 | 1.60e-38 | 135 |
| MS.gene65534.t1 | AT2G34430 | 44.103 | 195 | 93 | 6 | 49 | 230 | 63 | 254 | 1.84e-38 | 135 |
| MS.gene65534.t1 | AT2G34420 | 44.103 | 195 | 93 | 6 | 49 | 230 | 62 | 253 | 1.91e-38 | 135 |
| MS.gene65534.t1 | AT4G10340 | 39.791 | 191 | 105 | 3 | 53 | 235 | 82 | 270 | 2.70e-38 | 135 |
| MS.gene65534.t1 | AT1G29920 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 4.33e-38 | 134 |
| MS.gene65534.t1 | AT1G29910 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 4.33e-38 | 134 |
| MS.gene65534.t1 | AT1G29930 | 43.455 | 191 | 93 | 5 | 53 | 230 | 67 | 255 | 4.72e-38 | 134 |
| MS.gene65534.t1 | AT1G19150 | 39.512 | 205 | 96 | 7 | 46 | 231 | 68 | 263 | 8.75e-38 | 133 |
| MS.gene65534.t1 | AT2G05100 | 41.451 | 193 | 93 | 6 | 53 | 230 | 66 | 253 | 4.00e-35 | 126 |
| MS.gene65534.t1 | AT2G05070 | 41.451 | 193 | 93 | 6 | 53 | 230 | 66 | 253 | 4.35e-35 | 126 |
| MS.gene65534.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 53 | 230 | 99 | 286 | 3.57e-34 | 124 |
| MS.gene65534.t1 | AT3G27690 | 40.933 | 193 | 94 | 6 | 53 | 230 | 67 | 254 | 4.07e-34 | 123 |
| MS.gene65534.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 46 | 231 | 56 | 266 | 1.65e-33 | 122 |
| MS.gene65534.t1 | AT1G61520 | 40.465 | 215 | 95 | 9 | 46 | 231 | 56 | 266 | 1.65e-33 | 122 |
| MS.gene65534.t1 | AT1G76570 | 37.255 | 204 | 106 | 6 | 53 | 235 | 123 | 325 | 1.14e-32 | 121 |
| MS.gene65534.t1 | AT5G54270 | 34.766 | 256 | 138 | 8 | 1 | 230 | 1 | 253 | 6.33e-32 | 117 |
| MS.gene65534.t1 | AT1G61520 | 40.594 | 202 | 87 | 9 | 59 | 231 | 14 | 211 | 4.96e-30 | 111 |
| MS.gene65534.t1 | AT2G05100 | 39.645 | 169 | 83 | 5 | 53 | 206 | 66 | 230 | 1.10e-26 | 105 |
| MS.gene65534.t1 | AT1G15820 | 35.165 | 182 | 74 | 6 | 53 | 201 | 70 | 240 | 2.75e-20 | 87.0 |
| MS.gene65534.t1 | AT5G28450 | 53.333 | 75 | 32 | 3 | 165 | 237 | 99 | 172 | 1.88e-15 | 72.0 |
Find 68 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGGACCTTTGGAGAATT+TGG | 0.162428 | 6.4:+6136689 | MS.gene65534:CDS |
| ATGCATGCAGCCAGGGATTT+TGG | 0.202155 | 6.4:+6135596 | MS.gene65534:intron |
| GGTAGGGTGCCCCATGGAAC+AGG | 0.250060 | 6.4:-6135705 | None:intergenic |
| GGGCACCCTACCCACCATTT+TGG | 0.282770 | 6.4:+6135716 | MS.gene65534:CDS |
| ATATTTATTGCGGTGGAATA+AGG | 0.305874 | 6.4:-6136755 | None:intergenic |
| CCTAGACCACCTTACCTTGA+TGG | 0.314069 | 6.4:+6134343 | MS.gene65534:CDS |
| TTCTCCAAAGGTCCAGTTCC+TGG | 0.317892 | 6.4:-6136684 | None:intergenic |
| CAAGAATGGGCAGCACTTCC+AGG | 0.327557 | 6.4:+6135657 | MS.gene65534:CDS |
| GTACCTGAGGCATTGGGATT+AGG | 0.335566 | 6.4:+6135618 | MS.gene65534:CDS |
| TGTTGAGCACCAAAGGAGTA+TGG | 0.346828 | 6.4:+6135764 | MS.gene65534:CDS |
| AGGTAGGTTGCTTGTCCTCC+TGG | 0.354556 | 6.4:-6135675 | None:intergenic |
| ATTAGGGCGTCTTGCTTTGT+TGG | 0.356305 | 6.4:+6136626 | MS.gene65534:intron |
| GGTCTTTCTCCATACTCCTT+TGG | 0.357030 | 6.4:-6135773 | None:intergenic |
| TACCTTGATGGTTCAGCTCC+AGG | 0.367208 | 6.4:+6134355 | MS.gene65534:CDS |
| AGGCATTGGGATTAGGCAAC+TGG | 0.371841 | 6.4:+6135625 | MS.gene65534:CDS |
| GATTCACCATGACTTCTGAT+TGG | 0.414343 | 6.4:+6134308 | MS.gene65534:CDS |
| AAGGAACTCAATGACCAAAA+TGG | 0.429448 | 6.4:-6135730 | None:intergenic |
| CCATCAAGGTAAGGTGGTCT+AGG | 0.434279 | 6.4:-6134343 | None:intergenic |
| GGATTTGATCCTCTACGTCT+TGG | 0.447228 | 6.4:+6135042 | MS.gene65534:CDS |
| GGAGAATTTGGCTACTCACT+TGG | 0.449694 | 6.4:+6136701 | MS.gene65534:CDS |
| ATGACTTCTGATTGGATGCC+TGG | 0.463135 | 6.4:+6134316 | MS.gene65534:CDS |
| ACTGGGTGAAAGCGCAAGAA+TGG | 0.463890 | 6.4:+6135643 | MS.gene65534:CDS |
| ATATCCAGGAACTGGACCTT+TGG | 0.468791 | 6.4:+6136680 | MS.gene65534:CDS |
| CTGAACTCATTCACTGCAGA+TGG | 0.472063 | 6.4:+6135100 | MS.gene65534:CDS |
| GAAGCATTTGTGCAAGGAAG+TGG | 0.473273 | 6.4:-6134280 | None:intergenic |
| CCTAGGCAACCCTGTTCCAT+GGG | 0.474387 | 6.4:+6135695 | MS.gene65534:CDS |
| ACCTAGGCAACCCTGTTCCA+TGG | 0.483827 | 6.4:+6135694 | MS.gene65534:CDS |
| ACCTTGATGGTTCAGCTCCA+GGG | 0.491528 | 6.4:+6134356 | MS.gene65534:CDS |
| CAAACAGCATATCCAGGAAC+TGG | 0.497647 | 6.4:+6136672 | MS.gene65534:CDS |
| GCCTCAGGTACCAAAATCCC+TGG | 0.520369 | 6.4:-6135606 | None:intergenic |
| TTTGAGGAAGAAAGAAGTGA+TGG | 0.520641 | 6.4:-6134235 | None:intergenic |
| CTGGGTGAAAGCGCAAGAAT+GGG | 0.521945 | 6.4:+6135644 | MS.gene65534:CDS |
| CTACTCACTTGGCTGATCCA+TGG | 0.524507 | 6.4:+6136712 | MS.gene65534:CDS |
| TTGCCTAATCCCAATGCCTC+AGG | 0.531772 | 6.4:-6135621 | None:intergenic |
| AAAATCAAAGAAGTTAAGAA+TGG | 0.539315 | 6.4:+6135873 | MS.gene65534:CDS |
| TTGCCAATGTTGTTGTGCCA+TGG | 0.546443 | 6.4:-6136729 | None:intergenic |
| AATGACCAAAATGGTGGGTA+GGG | 0.550809 | 6.4:-6135721 | None:intergenic |
| GATCCATGGCACAACAACAT+TGG | 0.552198 | 6.4:+6136726 | MS.gene65534:CDS |
| GGAGGACAAGCAACCTACCT+AGG | 0.552273 | 6.4:+6135678 | MS.gene65534:CDS |
| CAATGACCAAAATGGTGGGT+AGG | 0.553231 | 6.4:-6135722 | None:intergenic |
| CCCATGGAACAGGGTTGCCT+AGG | 0.565700 | 6.4:-6135695 | None:intergenic |
| GTAGGGTGCCCCATGGAACA+GGG | 0.567362 | 6.4:-6135704 | None:intergenic |
| TAAGGTGGTCTAGGCTGACC+AGG | 0.567668 | 6.4:-6134334 | None:intergenic |
| AAAGGATCAAAAGCACCACC+AGG | 0.573417 | 6.4:-6135813 | None:intergenic |
| TGGAACAGGGTTGCCTAGGT+AGG | 0.576958 | 6.4:-6135691 | None:intergenic |
| GATACTTACAACAGCAAGCA+TGG | 0.578696 | 6.4:-6135124 | None:intergenic |
| TTTGAGGGAGATATTTATTG+CGG | 0.579609 | 6.4:-6136765 | None:intergenic |
| AGGCATCCAATCAGAAGTCA+TGG | 0.583801 | 6.4:-6134314 | None:intergenic |
| GGAGCTGAACCATCAAGGTA+AGG | 0.587136 | 6.4:-6134352 | None:intergenic |
| TGAACTCATTCACTGCAGAT+GGG | 0.591140 | 6.4:+6135101 | MS.gene65534:CDS |
| ACCCTGGAGCTGAACCATCA+AGG | 0.592237 | 6.4:-6134357 | None:intergenic |
| GTTCAACAAACAGCATATCC+AGG | 0.600057 | 6.4:+6136666 | MS.gene65534:CDS |
| GGCATTGGGATTAGGCAACT+GGG | 0.600276 | 6.4:+6135626 | MS.gene65534:CDS |
| GAGGGAGATATTTATTGCGG+TGG | 0.605032 | 6.4:-6136762 | None:intergenic |
| GCTCAACAAAAGCAACAGAA+AGG | 0.609797 | 6.4:-6135749 | None:intergenic |
| CTAGAAGAAGCATTTGTGCA+AGG | 0.615959 | 6.4:-6134286 | None:intergenic |
| GAACTCAATGACCAAAATGG+TGG | 0.616776 | 6.4:-6135727 | None:intergenic |
| AACTCAATGACCAAAATGGT+GGG | 0.618354 | 6.4:-6135726 | None:intergenic |
| GGGTCTTTAGAGTAACCCAA+AGG | 0.636573 | 6.4:-6135831 | None:intergenic |
| TGAGTAGCCAAATTCTCCAA+AGG | 0.641644 | 6.4:-6136696 | None:intergenic |
| ATGGTGGGTAGGGTGCCCCA+TGG | 0.643524 | 6.4:-6135711 | None:intergenic |
| GCTGAACCATCAAGGTAAGG+TGG | 0.647312 | 6.4:-6134349 | None:intergenic |
| GGTACTTCACCAAGACGTAG+AGG | 0.671912 | 6.4:-6135051 | None:intergenic |
| CCTGAAAAGAAGAAATACCC+TGG | 0.684859 | 6.4:+6135795 | MS.gene65534:CDS |
| GAATGGGCAGCACTTCCAGG+AGG | 0.697723 | 6.4:+6135660 | MS.gene65534:CDS |
| AAGGATCAAAAGCACCACCA+GGG | 0.706196 | 6.4:-6135812 | None:intergenic |
| CTAGGCAACCCTGTTCCATG+GGG | 0.718085 | 6.4:+6135696 | MS.gene65534:CDS |
| GAAAAGAAGAAATACCCTGG+TGG | 0.755288 | 6.4:+6135798 | MS.gene65534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATTGATATTGAAATA+TGG | + | chr6.4:6134806-6134825 | MS.gene65534:intron | 10.0% |
| !! | TTTATATATTATATGAAGTA+TGG | + | chr6.4:6134597-6134616 | MS.gene65534:intron | 10.0% |
| !!! | AAATAATTTTTAAGAGTTAA+AGG | + | chr6.4:6134943-6134962 | MS.gene65534:intron | 10.0% |
| !! | AAAAAATCAACATTAAAATC+AGG | - | chr6.4:6134777-6134796 | None:intergenic | 15.0% |
| !! | ACCAAAAAAAGAATAAATAA+TGG | - | chr6.4:6134411-6134430 | None:intergenic | 15.0% |
| !! | TAACTAAATAAAGGTTTATA+AGG | - | chr6.4:6134677-6134696 | None:intergenic | 15.0% |
| !! | TAATTTCGACAAAATTTAAA+TGG | - | chr6.4:6136476-6136495 | None:intergenic | 15.0% |
| !!! | ACATTTCTGAAATTATTATT+TGG | + | chr6.4:6136520-6136539 | MS.gene65534:intron | 15.0% |
| !!! | ACCATTATTTATTCTTTTTT+TGG | + | chr6.4:6134407-6134426 | MS.gene65534:intron | 15.0% |
| !!! | CAATTTTCTTAACTAAATAA+AGG | - | chr6.4:6134686-6134705 | None:intergenic | 15.0% |
| !! | AAAATCAAAGAAGTTAAGAA+TGG | + | chr6.4:6135873-6135892 | MS.gene65534:CDS | 20.0% |
| !! | ATTTGAATGTTGTATAGTAT+AGG | + | chr6.4:6136550-6136569 | MS.gene65534:intron | 20.0% |
| !! | TTTGTTGAATGTTTGTATTA+GGG | + | chr6.4:6136610-6136629 | MS.gene65534:intron | 20.0% |
| !!! | AAATAAGTTTAGTTTTCTCT+TGG | + | chr6.4:6135160-6135179 | MS.gene65534:intron | 20.0% |
| !!! | ATGTTATTTGAACATCAATA+TGG | - | chr6.4:6136504-6136523 | None:intergenic | 20.0% |
| !!! | TTGTTTTCAATATCGATATT+AGG | + | chr6.4:6135324-6135343 | MS.gene65534:intron | 20.0% |
| ! | AATGTTGTATAGTATAGGAT+AGG | + | chr6.4:6136555-6136574 | MS.gene65534:intron | 25.0% |
| ! | ACATGAATCATGATTTATCA+AGG | + | chr6.4:6136095-6136114 | MS.gene65534:intron | 25.0% |
| ! | AGCATATCTATATCTATCTT+CGG | - | chr6.4:6135931-6135950 | None:intergenic | 25.0% |
| ! | ATATAAATATACACATACCC+TGG | - | chr6.4:6134376-6134395 | None:intergenic | 25.0% |
| ! | ATTTGAATACCTGAAAATCA+TGG | + | chr6.4:6136136-6136155 | MS.gene65534:intron | 25.0% |
| ! | CAAAATTTAAATGGTTAACG+CGG | - | chr6.4:6136467-6136486 | None:intergenic | 25.0% |
| ! | CTTTGTTGAATGTTTGTATT+AGG | + | chr6.4:6136609-6136628 | MS.gene65534:intron | 25.0% |
| ! | GACATGTTAGAATATTTAAG+AGG | - | chr6.4:6134536-6134555 | None:intergenic | 25.0% |
| ! | GGTTAATGAAATGTTAGATT+TGG | - | chr6.4:6136226-6136245 | None:intergenic | 25.0% |
| ! | GTTAAGAAAATTGAAGTTGT+CGG | + | chr6.4:6134693-6134712 | MS.gene65534:intron | 25.0% |
| ! | TGAAAACAACTATGAAGTAT+TGG | - | chr6.4:6135313-6135332 | None:intergenic | 25.0% |
| ! | TGATTCATGTTCAAATTTCA+TGG | - | chr6.4:6136085-6136104 | None:intergenic | 25.0% |
| ! | TTTCAATATCGATATTAGGT+AGG | + | chr6.4:6135328-6135347 | MS.gene65534:intron | 25.0% |
| !! | AGTTGAAAATCTTGATTTTG+AGG | - | chr6.4:6134254-6134273 | None:intergenic | 25.0% |
| !! | TGTATTCATGGAACTTTTTA+GGG | - | chr6.4:6135854-6135873 | None:intergenic | 25.0% |
| !! | TTGTATTCATGGAACTTTTT+AGG | - | chr6.4:6135855-6135874 | None:intergenic | 25.0% |
| !!! | CTTCTTTGATTTTGTATTCA+TGG | - | chr6.4:6135866-6135885 | None:intergenic | 25.0% |
| AGTGATTGTTCGATCAAAAT+TGG | + | chr6.4:6134746-6134765 | MS.gene65534:intron | 30.0% | |
| TAAACCTAGGTAGGTTTAAA+CGG | - | chr6.4:6135482-6135501 | None:intergenic | 30.0% | |
| TAAGTGTATGAATGTTGTTG+TGG | + | chr6.4:6134998-6135017 | MS.gene65534:intron | 30.0% | |
| TCGATATTAGGTAGGTTTAA+TGG | + | chr6.4:6135336-6135355 | MS.gene65534:intron | 30.0% | |
| TTAGGTAGGTTTAATGGAAT+CGG | + | chr6.4:6135342-6135361 | MS.gene65534:intron | 30.0% | |
| ! | CGGTGTAAAACTATTTTACA+CGG | + | chr6.4:6135533-6135552 | MS.gene65534:intron | 30.0% |
| ! | TTGAATCTCTCAAGATTTTC+TGG | - | chr6.4:6135075-6135094 | None:intergenic | 30.0% |
| ! | TTTTTGTGTTACAGTGACTT+TGG | + | chr6.4:6135021-6135040 | MS.gene65534:intron | 30.0% |
| AACTCAATGACCAAAATGGT+GGG | - | chr6.4:6135729-6135748 | None:intergenic | 35.0% | |
| AAGGAACTCAATGACCAAAA+TGG | - | chr6.4:6135733-6135752 | None:intergenic | 35.0% | |
| AGAGAGTTGAATTGTTGTAG+TGG | + | chr6.4:6134460-6134479 | MS.gene65534:intron | 35.0% | |
| ATCCAGACACACCTAAATTT+AGG | - | chr6.4:6134628-6134647 | None:intergenic | 35.0% | |
| CAAACGGTCTAGATTTCAAA+CGG | - | chr6.4:6135437-6135456 | None:intergenic | 35.0% | |
| CAGCAACGTTAAAACTCTTA+GGG | + | chr6.4:6136353-6136372 | MS.gene65534:intron | 35.0% | |
| CTGAACCGTTAAATCAAAAC+CGG | - | chr6.4:6135215-6135234 | None:intergenic | 35.0% | |
| GTATGGACACTCCTAAATTT+AGG | + | chr6.4:6134614-6134633 | MS.gene65534:intron | 35.0% | |
| TTATATTATGCATGCAGCCA+GGG | + | chr6.4:6135589-6135608 | MS.gene65534:intron | 35.0% | |
| TTGTTCCAACGACCATTTAT+GGG | + | chr6.4:6134840-6134859 | MS.gene65534:intron | 35.0% | |
| TTTAAACGGTCAATGGTTGT+TGG | - | chr6.4:6135468-6135487 | None:intergenic | 35.0% | |
| TTTGAGGAAGAAAGAAGTGA+TGG | - | chr6.4:6134238-6134257 | None:intergenic | 35.0% | |
| !! | CAGGGTATTTCTTCTTTTCA+GGG | - | chr6.4:6135797-6135816 | None:intergenic | 35.0% |
| !! | GTTGTCGAATTTTAGTGTCA+CGG | - | chr6.4:6135968-6135987 | None:intergenic | 35.0% |
| !!! | AAATGGTTAACGCGGTTTTT+TGG | - | chr6.4:6136459-6136478 | None:intergenic | 35.0% |
| !!! | CAGCGTATACTAGTTTTACA+AGG | + | chr6.4:6135272-6135291 | MS.gene65534:intron | 35.0% |
| !!! | GCGGTTTTTTGGTGTAAATT+GGG | - | chr6.4:6136448-6136467 | None:intergenic | 35.0% |
| AATTCTCGCAATCATGTGGT+CGG | + | chr6.4:6134717-6134736 | MS.gene65534:intron | 40.0% | |
| ACCGTTAAATCAAAACCGGA+CGG | - | chr6.4:6135211-6135230 | None:intergenic | 40.0% | |
| ACTGCGTTAACTATTAACCC+AGG | + | chr6.4:6136256-6136275 | MS.gene65534:intron | 40.0% | |
| ACTTAAGCTCCCCAAATATG+AGG | - | chr6.4:6134915-6134934 | None:intergenic | 40.0% | |
| AGGTAGGTTTAAACGGTCAA+TGG | - | chr6.4:6135475-6135494 | None:intergenic | 40.0% | |
| AGTCACCTCTCCTCATATTT+GGG | + | chr6.4:6134902-6134921 | MS.gene65534:intron | 40.0% | |
| ATTTCAAACGGTCCATCAGA+TGG | - | chr6.4:6135425-6135444 | None:intergenic | 40.0% | |
| CCTGAAAAGAAGAAATACCC+TGG | + | chr6.4:6135795-6135814 | MS.gene65534:CDS | 40.0% | |
| CTCCTAAATTTAGGTGTGTC+TGG | + | chr6.4:6134623-6134642 | MS.gene65534:intron | 40.0% | |
| CTGGGTTTGAATCTAGACTT+GGG | + | chr6.4:6136326-6136345 | MS.gene65534:intron | 40.0% | |
| CTTGTTCCAACGACCATTTA+TGG | + | chr6.4:6134839-6134858 | MS.gene65534:intron | 40.0% | |
| GAAAAGAAGAAATACCCTGG+TGG | + | chr6.4:6135798-6135817 | MS.gene65534:CDS | 40.0% | |
| GAACTCAATGACCAAAATGG+TGG | - | chr6.4:6135730-6135749 | None:intergenic | 40.0% | |
| GATACTTACAACAGCAAGCA+TGG | - | chr6.4:6135127-6135146 | None:intergenic | 40.0% | |
| GATTCACCATGACTTCTGAT+TGG | + | chr6.4:6134308-6134327 | MS.gene65534:CDS | 40.0% | |
| GCAGCAACGTTAAAACTCTT+AGG | + | chr6.4:6136352-6136371 | MS.gene65534:intron | 40.0% | |
| GCTCAACAAAAGCAACAGAA+AGG | - | chr6.4:6135752-6135771 | None:intergenic | 40.0% | |
| GTTAACGCAGTTTACACGTA+TGG | - | chr6.4:6136247-6136266 | None:intergenic | 40.0% | |
| GTTATATTATGCATGCAGCC+AGG | + | chr6.4:6135588-6135607 | MS.gene65534:intron | 40.0% | |
| GTTCAACAAACAGCATATCC+AGG | + | chr6.4:6136666-6136685 | MS.gene65534:CDS | 40.0% | |
| GTTGTTGGATCGAGATCAAA+CGG | + | chr6.4:6135375-6135394 | MS.gene65534:intron | 40.0% | |
| GTTGTTGGATCGAGATCAAA+CGG | - | chr6.4:6135394-6135375 | None:intergenic | 40.0% | |
| TAAACCTACCTAGGTTTACG+TGG | + | chr6.4:6135484-6135503 | MS.gene65534:intron | 40.0% | |
| TAGTCACCTCTCCTCATATT+TGG | + | chr6.4:6134901-6134920 | MS.gene65534:intron | 40.0% | |
| TCGATCCAACAACCAATGAT+GGG | - | chr6.4:6135368-6135387 | None:intergenic | 40.0% | |
| TGAACTCATTCACTGCAGAT+GGG | + | chr6.4:6135101-6135120 | MS.gene65534:CDS | 40.0% | |
| TGAGTAGCCAAATTCTCCAA+AGG | - | chr6.4:6136699-6136718 | None:intergenic | 40.0% | |
| TTCTAAATCAGCCCATCTGA+TGG | + | chr6.4:6135410-6135429 | MS.gene65534:intron | 40.0% | |
| TTGACCGTTTAAACCTACCT+AGG | + | chr6.4:6135475-6135494 | MS.gene65534:intron | 40.0% | |
| TTTCAAACGGTCCATCAGAT+GGG | - | chr6.4:6135424-6135443 | None:intergenic | 40.0% | |
| ! | AACTGGACCTTTGGAGAATT+TGG | + | chr6.4:6136689-6136708 | MS.gene65534:CDS | 40.0% |
| ! | ACAAATCCATCGAGCATTGT+GGG | - | chr6.4:6136401-6136420 | None:intergenic | 40.0% |
| ! | CGCGATTAACCATGATTTTC+AGG | - | chr6.4:6136148-6136167 | None:intergenic | 40.0% |
| ! | GACGAGTTTTCGTCGAATAT+CGG | + | chr6.4:6135513-6135532 | MS.gene65534:intron | 40.0% |
| ! | GTCAATTTTCCACGTTCATG+CGG | - | chr6.4:6134870-6134889 | None:intergenic | 40.0% |
| !! | AATGACCAAAATGGTGGGTA+GGG | - | chr6.4:6135724-6135743 | None:intergenic | 40.0% |
| !! | ATTTTGGTACCTGAGGCATT+GGG | + | chr6.4:6135612-6135631 | MS.gene65534:CDS | 40.0% |
| !! | CCAGGGTATTTCTTCTTTTC+AGG | - | chr6.4:6135798-6135817 | None:intergenic | 40.0% |
| !! | CTAGAAGAAGCATTTGTGCA+AGG | - | chr6.4:6134289-6134308 | None:intergenic | 40.0% |
| !! | TTGCTTTTGTTGAGCACCAA+AGG | + | chr6.4:6135757-6135776 | MS.gene65534:CDS | 40.0% |
| !!! | ACCGTCCGGTTTTGATTTAA+CGG | + | chr6.4:6135207-6135226 | MS.gene65534:intron | 40.0% |
| !!! | CGCGGTTTTTTGGTGTAAAT+TGG | - | chr6.4:6136449-6136468 | None:intergenic | 40.0% |
| !!! | CTTGCTTTGTTGGCTTTTGT+TGG | + | chr6.4:6136636-6136655 | MS.gene65534:CDS | 40.0% |
| AGGCATCCAATCAGAAGTCA+TGG | - | chr6.4:6134317-6134336 | None:intergenic | 45.0% | |
| AGTAACACGTTTCACACACG+TGG | + | chr6.4:6135998-6136017 | MS.gene65534:intron | 45.0% | |
| ATATCCAGGAACTGGACCTT+TGG | + | chr6.4:6136680-6136699 | MS.gene65534:CDS | 45.0% | |
| ATCAAAACCGGACGGTTTCA+CGG | - | chr6.4:6135203-6135222 | None:intergenic | 45.0% | |
| ATGACTTCTGATTGGATGCC+TGG | + | chr6.4:6134316-6134335 | MS.gene65534:CDS | 45.0% | |
| ATTGCCACGTAAACCTAGGT+AGG | - | chr6.4:6135491-6135510 | None:intergenic | 45.0% | |
| CAAACAGCATATCCAGGAAC+TGG | + | chr6.4:6136672-6136691 | MS.gene65534:CDS | 45.0% | |
| CCAAGTCTAGATTCAAACCC+AGG | - | chr6.4:6136328-6136347 | None:intergenic | 45.0% | |
| CCTGGGTTTGAATCTAGACT+TGG | + | chr6.4:6136325-6136344 | MS.gene65534:intron | 45.0% | |
| CGGTAATTCTCGCAATCATG+TGG | + | chr6.4:6134713-6134732 | MS.gene65534:intron | 45.0% | |
| CTCGATCCAACAACCAATGA+TGG | - | chr6.4:6135369-6135388 | None:intergenic | 45.0% | |
| CTGAACTCATTCACTGCAGA+TGG | + | chr6.4:6135100-6135119 | MS.gene65534:CDS | 45.0% | |
| GATCCATGGCACAACAACAT+TGG | + | chr6.4:6136726-6136745 | MS.gene65534:CDS | 45.0% | |
| GCAGTGCAATGAGTGGTTAT+TGG | + | chr6.4:6136026-6136045 | MS.gene65534:intron | 45.0% | |
| GGAGAATTTGGCTACTCACT+TGG | + | chr6.4:6136701-6136720 | MS.gene65534:CDS | 45.0% | |
| GGATTTGATCCTCTACGTCT+TGG | + | chr6.4:6135042-6135061 | MS.gene65534:CDS | 45.0% | |
| GGTCTTTCTCCATACTCCTT+TGG | - | chr6.4:6135776-6135795 | None:intergenic | 45.0% | |
| GTCACCTCTCCTCATATTTG+GGG | + | chr6.4:6134903-6134922 | MS.gene65534:intron | 45.0% | |
| TAATGGAATCGGCCCATCAT+TGG | + | chr6.4:6135353-6135372 | MS.gene65534:intron | 45.0% | |
| TAGATTCAAACCCAGGACCT+TGG | - | chr6.4:6136321-6136340 | None:intergenic | 45.0% | |
| TCACATTGCCACGTAAACCT+AGG | - | chr6.4:6135495-6135514 | None:intergenic | 45.0% | |
| TGTTCGACATGTGACGAACA+CGG | + | chr6.4:6134647-6134666 | MS.gene65534:intron | 45.0% | |
| TGTTGAGCACCAAAGGAGTA+TGG | + | chr6.4:6135764-6135783 | MS.gene65534:CDS | 45.0% | |
| TTGCCAATGTTGTTGTGCCA+TGG | - | chr6.4:6136732-6136751 | None:intergenic | 45.0% | |
| ! | ATTAGGGCGTCTTGCTTTGT+TGG | + | chr6.4:6136626-6136645 | MS.gene65534:intron | 45.0% |
| ! | ATTTTCCACGTTCATGCGGT+CGG | - | chr6.4:6134866-6134885 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTGCAAGGAAG+TGG | - | chr6.4:6134283-6134302 | None:intergenic | 45.0% |
| ! | GACAAATCCATCGAGCATTG+TGG | - | chr6.4:6136402-6136421 | None:intergenic | 45.0% |
| ! | GGAGAACTTTCCGTCCTTTT+GGG | + | chr6.4:6136374-6136393 | MS.gene65534:intron | 45.0% |
| ! | GGTGGTGCTTTTGATCCTTT+GGG | + | chr6.4:6135816-6135835 | MS.gene65534:CDS | 45.0% |
| ! | TCTAGCTTAACCAAGGTCCT+GGG | + | chr6.4:6136308-6136327 | MS.gene65534:intron | 45.0% |
| !! | AAAGGATCAAAAGCACCACC+AGG | - | chr6.4:6135816-6135835 | None:intergenic | 45.0% |
| !! | AAGGATCAAAAGCACCACCA+GGG | - | chr6.4:6135815-6135834 | None:intergenic | 45.0% |
| !! | CAATGACCAAAATGGTGGGT+AGG | - | chr6.4:6135725-6135744 | None:intergenic | 45.0% |
| !! | GATTTTGGTACCTGAGGCAT+TGG | + | chr6.4:6135611-6135630 | MS.gene65534:CDS | 45.0% |
| !! | GGGTCTTTAGAGTAACCCAA+AGG | - | chr6.4:6135834-6135853 | None:intergenic | 45.0% |
| !! | GGTCTCTTCTAGCTTAACCA+AGG | + | chr6.4:6136301-6136320 | MS.gene65534:intron | 45.0% |
| !! | TGGTGGTGCTTTTGATCCTT+TGG | + | chr6.4:6135815-6135834 | MS.gene65534:CDS | 45.0% |
| !! | TTCTAGCTTAACCAAGGTCC+TGG | + | chr6.4:6136307-6136326 | MS.gene65534:intron | 45.0% |
| AGCGCTTAGATGAGATGGCA+CGG | + | chr6.4:6136279-6136298 | MS.gene65534:intron | 50.0% | |
| AGCTCCCCAAATATGAGGAG+AGG | - | chr6.4:6134910-6134929 | None:intergenic | 50.0% | |
| CATCTCATCTAAGCGCTCCT+GGG | - | chr6.4:6136276-6136295 | None:intergenic | 50.0% | |
| CATTGTGGGACCCAAAAGGA+CGG | - | chr6.4:6136387-6136406 | None:intergenic | 50.0% | |
| CCATCAAGGTAAGGTGGTCT+AGG | - | chr6.4:6134346-6134365 | None:intergenic | 50.0% | |
| CCTAGACCACCTTACCTTGA+TGG | + | chr6.4:6134343-6134362 | MS.gene65534:CDS | 50.0% | |
| CTACTCACTTGGCTGATCCA+TGG | + | chr6.4:6136712-6136731 | MS.gene65534:CDS | 50.0% | |
| GCTGAACCATCAAGGTAAGG+TGG | - | chr6.4:6134352-6134371 | None:intergenic | 50.0% | |
| GGAGCTGAACCATCAAGGTA+AGG | - | chr6.4:6134355-6134374 | None:intergenic | 50.0% | |
| GGTACTTCACCAAGACGTAG+AGG | - | chr6.4:6135054-6135073 | None:intergenic | 50.0% | |
| GGTTAACGCAGTGCAATGAG+TGG | + | chr6.4:6136019-6136038 | MS.gene65534:intron | 50.0% | |
| TTCTCCAAAGGTCCAGTTCC+TGG | - | chr6.4:6136687-6136706 | None:intergenic | 50.0% | |
| TTGCCTAATCCCAATGCCTC+AGG | - | chr6.4:6135624-6135643 | None:intergenic | 50.0% | |
| ! | ACCTTGATGGTTCAGCTCCA+GGG | + | chr6.4:6134356-6134375 | MS.gene65534:CDS | 50.0% |
| ! | ACTGGGTGAAAGCGCAAGAA+TGG | + | chr6.4:6135643-6135662 | MS.gene65534:CDS | 50.0% |
| ! | ATCGGCCCATCATTGGTTGT+TGG | + | chr6.4:6135360-6135379 | MS.gene65534:intron | 50.0% |
| ! | ATGCATGCAGCCAGGGATTT+TGG | + | chr6.4:6135596-6135615 | MS.gene65534:intron | 50.0% |
| ! | CTGGGTGAAAGCGCAAGAAT+GGG | + | chr6.4:6135644-6135663 | MS.gene65534:CDS | 50.0% |
| ! | GGCATTGGGATTAGGCAACT+GGG | + | chr6.4:6135626-6135645 | MS.gene65534:CDS | 50.0% |
| ! | GGGAGAACTTTCCGTCCTTT+TGG | + | chr6.4:6136373-6136392 | MS.gene65534:intron | 50.0% |
| ! | TACCTTGATGGTTCAGCTCC+AGG | + | chr6.4:6134355-6134374 | MS.gene65534:CDS | 50.0% |
| !! | AGGCATTGGGATTAGGCAAC+TGG | + | chr6.4:6135625-6135644 | MS.gene65534:CDS | 50.0% |
| !! | GTACCTGAGGCATTGGGATT+AGG | + | chr6.4:6135618-6135637 | MS.gene65534:CDS | 50.0% |
| ACCCTGGAGCTGAACCATCA+AGG | - | chr6.4:6134360-6134379 | None:intergenic | 55.0% | |
| ACCTAGGCAACCCTGTTCCA+TGG | + | chr6.4:6135694-6135713 | MS.gene65534:CDS | 55.0% | |
| AGGTAGGTTGCTTGTCCTCC+TGG | - | chr6.4:6135678-6135697 | None:intergenic | 55.0% | |
| CAAGAATGGGCAGCACTTCC+AGG | + | chr6.4:6135657-6135676 | MS.gene65534:CDS | 55.0% | |
| CCATCTCATCTAAGCGCTCC+TGG | - | chr6.4:6136277-6136296 | None:intergenic | 55.0% | |
| CCTAGGCAACCCTGTTCCAT+GGG | + | chr6.4:6135695-6135714 | MS.gene65534:CDS | 55.0% | |
| CTAGGCAACCCTGTTCCATG+GGG | + | chr6.4:6135696-6135715 | MS.gene65534:CDS | 55.0% | |
| CTAGTAGCCGTGAAACCGTC+CGG | + | chr6.4:6135193-6135212 | MS.gene65534:intron | 55.0% | |
| GCCTCAGGTACCAAAATCCC+TGG | - | chr6.4:6135609-6135628 | None:intergenic | 55.0% | |
| GCGCTTAGATGAGATGGCAC+GGG | + | chr6.4:6136280-6136299 | MS.gene65534:intron | 55.0% | |
| GGAGGACAAGCAACCTACCT+AGG | + | chr6.4:6135678-6135697 | MS.gene65534:CDS | 55.0% | |
| GTCGGCCCATAAATGGTCGT+TGG | - | chr6.4:6134848-6134867 | None:intergenic | 55.0% | |
| TAAGGTGGTCTAGGCTGACC+AGG | - | chr6.4:6134337-6134356 | None:intergenic | 55.0% | |
| TCATGCGGTCGGCCCATAAA+TGG | - | chr6.4:6134855-6134874 | None:intergenic | 55.0% | |
| TGGAACAGGGTTGCCTAGGT+AGG | - | chr6.4:6135694-6135713 | None:intergenic | 55.0% | |
| TTGGGTCCCACAATGCTCGA+TGG | + | chr6.4:6136392-6136411 | MS.gene65534:intron | 55.0% | |
| TTTGTCTCCGCAGTTGCGTG+CGG | + | chr6.4:6136416-6136435 | MS.gene65534:intron | 55.0% | |
| ! | CGAGCATTGTGGGACCCAAA+AGG | - | chr6.4:6136391-6136410 | None:intergenic | 55.0% |
| !! | CCAGGAGCGCTTAGATGAGA+TGG | + | chr6.4:6136274-6136293 | MS.gene65534:intron | 55.0% |
| !! | GCCAGGGATTTTGGTACCTG+AGG | + | chr6.4:6135605-6135624 | MS.gene65534:intron | 55.0% |
| CCCATGGAACAGGGTTGCCT+AGG | - | chr6.4:6135698-6135717 | None:intergenic | 60.0% | |
| GAATGGGCAGCACTTCCAGG+AGG | + | chr6.4:6135660-6135679 | MS.gene65534:CDS | 60.0% | |
| GTAACCTCCGCACGCAACTG+CGG | - | chr6.4:6136426-6136445 | None:intergenic | 60.0% | |
| ! | GGGCACCCTACCCACCATTT+TGG | + | chr6.4:6135716-6135735 | MS.gene65534:CDS | 60.0% |
| ! | GTAGGGTGCCCCATGGAACA+GGG | - | chr6.4:6135707-6135726 | None:intergenic | 60.0% |
| ATGGGCCGACCGCATGAACG+TGG | + | chr6.4:6134858-6134877 | MS.gene65534:intron | 65.0% | |
| ! | GGTAGGGTGCCCCATGGAAC+AGG | - | chr6.4:6135708-6135727 | None:intergenic | 65.0% |
| !! | ATGGTGGGTAGGGTGCCCCA+TGG | - | chr6.4:6135714-6135733 | None:intergenic | 65.0% |
| GTCTCCGCAGTTGCGTGCGG+AGG | + | chr6.4:6136419-6136438 | MS.gene65534:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 6134193 | 6136773 | 6134193 | ID=MS.gene65534 |
| chr6.4 | mRNA | 6134193 | 6136773 | 6134193 | ID=MS.gene65534.t1;Parent=MS.gene65534 |
| chr6.4 | exon | 6134193 | 6134377 | 6134193 | ID=MS.gene65534.t1.exon1;Parent=MS.gene65534.t1 |
| chr6.4 | CDS | 6134193 | 6134377 | 6134193 | ID=cds.MS.gene65534.t1;Parent=MS.gene65534.t1 |
| chr6.4 | exon | 6135035 | 6135137 | 6135035 | ID=MS.gene65534.t1.exon2;Parent=MS.gene65534.t1 |
| chr6.4 | CDS | 6135035 | 6135137 | 6135035 | ID=cds.MS.gene65534.t1;Parent=MS.gene65534.t1 |
| chr6.4 | exon | 6135606 | 6135894 | 6135606 | ID=MS.gene65534.t1.exon3;Parent=MS.gene65534.t1 |
| chr6.4 | CDS | 6135606 | 6135894 | 6135606 | ID=cds.MS.gene65534.t1;Parent=MS.gene65534.t1 |
| chr6.4 | exon | 6136631 | 6136773 | 6136631 | ID=MS.gene65534.t1.exon4;Parent=MS.gene65534.t1 |
| chr6.4 | CDS | 6136631 | 6136773 | 6136631 | ID=cds.MS.gene65534.t1;Parent=MS.gene65534.t1 |
| Gene Sequence |
| Protein sequence |
