Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44017.t1 | XP_003591013.1 | 90.1 | 141 | 14 | 0 | 1 | 141 | 1 | 141 | 9.60E-65 | 256.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44017.t1 | G7I6X0 | 90.1 | 141 | 14 | 0 | 1 | 141 | 1 | 141 | 6.9e-65 | 256.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene44017 | 0.822615 | 2.15E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene44017 | 0.847882 | 8.73E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene44017 | 0.875489 | 2.96E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene44017 | 0.877865 | 4.46E-69 | -1.69E-46 |
| MS.gene049232 | MS.gene44017 | 0.875698 | 2.51E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene44017 | 0.890986 | 6.00E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene44017 | 0.893917 | 4.02E-75 | -1.69E-46 |
| MS.gene049369 | MS.gene44017 | 0.802831 | 4.65E-49 | -1.69E-46 |
| MS.gene04938 | MS.gene44017 | 0.804045 | 2.61E-49 | -1.69E-46 |
| MS.gene049396 | MS.gene44017 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene44017 | 0.838754 | 2.38E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene44017 | 0.867368 | 1.44E-65 | -1.69E-46 |
| MS.gene049611 | MS.gene44017 | -0.81819 | 2.23E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene44017 | 0.825059 | 5.76E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene44017 | 0.83124 | 1.87E-55 | -1.69E-46 |
| MS.gene049656 | MS.gene44017 | 0.819339 | 1.22E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene44017 | 0.851929 | 6.44E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene44017 | 0.903761 | 2.48E-79 | -1.69E-46 |
| MS.gene050163 | MS.gene44017 | 0.866421 | 2.89E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene44017 | 0.859503 | 3.96E-63 | -1.69E-46 |
| MS.gene050170 | MS.gene44017 | 0.855923 | 4.55E-62 | -1.69E-46 |
| MS.gene050216 | MS.gene44017 | 0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene44017 | 0.868487 | 6.30E-66 | -1.69E-46 |
| MS.gene050333 | MS.gene44017 | 0.857032 | 2.15E-62 | -1.69E-46 |
| MS.gene050381 | MS.gene44017 | -0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene44017 | 0.85561 | 5.62E-62 | -1.69E-46 |
| MS.gene050499 | MS.gene44017 | 0.802414 | 5.68E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene44017 | 0.899569 | 1.74E-77 | -1.69E-46 |
| MS.gene050518 | MS.gene44017 | 0.880073 | 7.41E-70 | -1.69E-46 |
| MS.gene050520 | MS.gene44017 | 0.830112 | 3.53E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene44017 | 0.807889 | 4.05E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene44017 | 0.856353 | 3.41E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene44017 | 0.815513 | 8.90E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene44017 | 0.884857 | 1.34E-71 | -1.69E-46 |
| MS.gene050647 | MS.gene44017 | -0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene050662 | MS.gene44017 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene44017 | 0.883369 | 4.76E-71 | -1.69E-46 |
| MS.gene050686 | MS.gene44017 | 0.809493 | 1.84E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene44017 | 0.880554 | 4.99E-70 | -1.69E-46 |
| MS.gene050747 | MS.gene44017 | 0.859222 | 4.80E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene44017 | 0.878411 | 2.87E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene44017 | 0.844979 | 5.41E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene44017 | 0.874978 | 4.43E-68 | -1.69E-46 |
| MS.gene050871 | MS.gene44017 | 0.875624 | 2.66E-68 | -1.69E-46 |
| MS.gene050876 | MS.gene44017 | 0.842855 | 2.00E-58 | -1.69E-46 |
| MS.gene050883 | MS.gene44017 | -0.803745 | 3.01E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene44017 | 0.82867 | 7.90E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene44017 | 0.850479 | 1.65E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene44017 | 0.899765 | 1.43E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene44017 | 0.829813 | 4.17E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene44017 | -0.810986 | 8.77E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene44017 | -0.821945 | 3.08E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene44017 | 0.835757 | 1.39E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene44017 | 0.832684 | 8.22E-56 | -1.69E-46 |
| MS.gene051336 | MS.gene44017 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene44017 | -0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene44017 | -0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene44017 | 0.816472 | 5.43E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene44017 | 0.830911 | 2.25E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene44017 | 0.849266 | 3.61E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene44017 | 0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene44017 | 0.843089 | 1.74E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene44017 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene44017 | 0.824189 | 9.24E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene44017 | 0.818666 | 1.74E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene44017 | 0.821168 | 4.66E-53 | -1.69E-46 |
| MS.gene051946 | MS.gene44017 | -0.802664 | 5.04E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene44017 | 0.865187 | 7.08E-65 | -1.69E-46 |
| MS.gene052271 | MS.gene44017 | 0.824737 | 6.86E-54 | -1.69E-46 |
| MS.gene052318 | MS.gene44017 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene44017 | 0.804549 | 2.05E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene44017 | 0.812146 | 4.91E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene44017 | 0.846052 | 2.77E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene44017 | 0.861351 | 1.09E-63 | -1.69E-46 |
| MS.gene052501 | MS.gene44017 | 0.809778 | 1.60E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene44017 | 0.870241 | 1.69E-66 | -1.69E-46 |
| MS.gene052504 | MS.gene44017 | 0.821875 | 3.20E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene44017 | 0.842752 | 2.13E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene44017 | 0.886977 | 2.14E-72 | -1.69E-46 |
| MS.gene052822 | MS.gene44017 | 0.850405 | 1.73E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene44017 | 0.863391 | 2.57E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene44017 | 0.859465 | 4.06E-63 | -1.69E-46 |
| MS.gene052916 | MS.gene44017 | 0.834985 | 2.18E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene44017 | 0.87523 | 3.63E-68 | -1.69E-46 |
| MS.gene053018 | MS.gene44017 | 0.830961 | 2.19E-55 | -1.69E-46 |
| MS.gene053117 | MS.gene44017 | 0.841362 | 4.98E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene44017 | 0.84522 | 4.65E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene44017 | 0.846443 | 2.17E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene44017 | 0.893751 | 4.70E-75 | -1.69E-46 |
| MS.gene053286 | MS.gene44017 | 0.891377 | 4.20E-74 | -1.69E-46 |
| MS.gene053420 | MS.gene44017 | -0.82855 | 8.45E-55 | -1.69E-46 |
| MS.gene053421 | MS.gene44017 | -0.801267 | 9.76E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene44017 | 0.871186 | 8.28E-67 | -1.69E-46 |
| MS.gene053479 | MS.gene44017 | 0.821024 | 5.03E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene44017 | 0.849325 | 3.48E-60 | -1.69E-46 |
| MS.gene053505 | MS.gene44017 | 0.801811 | 7.55E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene44017 | 0.873703 | 1.20E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene44017 | 0.859857 | 3.09E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene44017 | 0.866604 | 2.52E-65 | -1.69E-46 |
| MS.gene053633 | MS.gene44017 | 0.802046 | 6.76E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene44017 | 0.858843 | 6.24E-63 | -1.69E-46 |
| MS.gene053915 | MS.gene44017 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene44017 | 0.855972 | 4.41E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene44017 | 0.822548 | 2.23E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene44017 | 0.847982 | 8.19E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene44017 | 0.88413 | 2.49E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene44017 | 0.870676 | 1.22E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene44017 | 0.875429 | 3.10E-68 | -1.69E-46 |
| MS.gene054706 | MS.gene44017 | -0.82766 | 1.38E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene44017 | -0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene44017 | 0.835168 | 1.96E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene44017 | 0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene44017 | 0.806054 | 9.91E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene44017 | 0.895211 | 1.19E-75 | -1.69E-46 |
| MS.gene05505 | MS.gene44017 | 0.839481 | 1.54E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene44017 | -0.82801 | 1.14E-54 | -1.69E-46 |
| MS.gene055202 | MS.gene44017 | -0.804152 | 2.48E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene44017 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene44017 | 0.836203 | 1.07E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene44017 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene44017 | 0.893049 | 9.03E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene44017 | 0.881622 | 2.06E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene44017 | 0.874809 | 5.05E-68 | -1.69E-46 |
| MS.gene055634 | MS.gene44017 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene055638 | MS.gene44017 | 0.822741 | 2.01E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene44017 | 0.823829 | 1.12E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene44017 | 0.836096 | 1.14E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene44017 | 0.845983 | 2.89E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene44017 | 0.835454 | 1.66E-56 | -1.69E-46 |
| MS.gene055776 | MS.gene44017 | 0.827071 | 1.92E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene44017 | 0.860268 | 2.33E-63 | -1.69E-46 |
| MS.gene055909 | MS.gene44017 | 0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene44017 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene44017 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene44017 | 0.876456 | 1.38E-68 | -1.69E-46 |
| MS.gene056040 | MS.gene44017 | 0.819512 | 1.12E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene44017 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene056166 | MS.gene44017 | 0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene44017 | 0.845185 | 4.76E-59 | -1.69E-46 |
| MS.gene056387 | MS.gene44017 | 0.814614 | 1.41E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene44017 | 0.827762 | 1.31E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene44017 | 0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene44017 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene44017 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene44017 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene44017 | 0.824068 | 9.86E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene44017 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene44017 | 0.896043 | 5.39E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene44017 | 0.873253 | 1.70E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene44017 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene44017 | 0.820036 | 8.48E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene44017 | 0.898682 | 4.18E-77 | -1.69E-46 |
| MS.gene056692 | MS.gene44017 | 0.845402 | 4.15E-59 | -1.69E-46 |
| MS.gene056878 | MS.gene44017 | 0.835059 | 2.09E-56 | -1.69E-46 |
| MS.gene056946 | MS.gene44017 | 0.831492 | 1.62E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene44017 | 0.854784 | 9.77E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene44017 | 0.836623 | 8.40E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene44017 | 0.814484 | 1.50E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene44017 | 0.849377 | 3.36E-60 | -1.69E-46 |
| MS.gene057658 | MS.gene44017 | 0.806844 | 6.75E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene44017 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene44017 | 0.856486 | 3.12E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene44017 | 0.80259 | 5.22E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene44017 | 0.802348 | 5.85E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene44017 | 0.843753 | 1.15E-58 | -1.69E-46 |
| MS.gene057926 | MS.gene44017 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene44017 | 0.817812 | 2.72E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene44017 | 0.835162 | 1.97E-56 | -1.69E-46 |
| MS.gene058157 | MS.gene44017 | 0.858016 | 1.10E-62 | -1.69E-46 |
| MS.gene058183 | MS.gene44017 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene44017 | -0.800362 | 1.49E-48 | -1.69E-46 |
| MS.gene058323 | MS.gene44017 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene44017 | 0.816423 | 5.57E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene44017 | 0.876227 | 1.65E-68 | -1.69E-46 |
| MS.gene058419 | MS.gene44017 | 0.880764 | 4.20E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene44017 | 0.849607 | 2.90E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene44017 | 0.88038 | 5.76E-70 | -1.69E-46 |
| MS.gene058838 | MS.gene44017 | 0.844697 | 6.44E-59 | -1.69E-46 |
| MS.gene05883 | MS.gene44017 | 0.81166 | 6.26E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene44017 | -0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene44017 | 0.892301 | 1.80E-74 | -1.69E-46 |
| MS.gene059023 | MS.gene44017 | 0.866452 | 2.82E-65 | -1.69E-46 |
| MS.gene059029 | MS.gene44017 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene44017 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene44017 | 0.807547 | 4.79E-50 | -1.69E-46 |
| MS.gene059305 | MS.gene44017 | 0.834031 | 3.79E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene44017 | 0.80868 | 2.75E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene44017 | 0.881268 | 2.76E-70 | -1.69E-46 |
| MS.gene059368 | MS.gene44017 | 0.830351 | 3.08E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene44017 | 0.800656 | 1.30E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene44017 | 0.885032 | 1.15E-71 | -1.69E-46 |
| MS.gene059680 | MS.gene44017 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene44017 | 0.888634 | 4.96E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene44017 | 0.832959 | 7.02E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene44017 | 0.863185 | 2.98E-64 | -1.69E-46 |
| MS.gene059837 | MS.gene44017 | 0.820133 | 8.06E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene44017 | 0.869948 | 2.11E-66 | -1.69E-46 |
| MS.gene059902 | MS.gene44017 | 0.823767 | 1.16E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene44017 | 0.828172 | 1.04E-54 | -1.69E-46 |
| MS.gene060187 | MS.gene44017 | -0.802434 | 5.62E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene44017 | 0.862666 | 4.31E-64 | -1.69E-46 |
| MS.gene060593 | MS.gene44017 | -0.812393 | 4.34E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene44017 | -0.847032 | 1.49E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene44017 | 0.855615 | 5.60E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene44017 | 0.865143 | 7.31E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene44017 | 0.895661 | 7.75E-76 | -1.69E-46 |
| MS.gene06077 | MS.gene44017 | 0.894633 | 2.05E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene44017 | 0.849848 | 2.48E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene44017 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene44017 | 0.84611 | 2.67E-59 | -1.69E-46 |
| MS.gene06097 | MS.gene44017 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene44017 | 0.873133 | 1.86E-67 | -1.69E-46 |
| MS.gene061134 | MS.gene44017 | 0.839497 | 1.53E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene44017 | 0.843455 | 1.39E-58 | -1.69E-46 |
| MS.gene061171 | MS.gene44017 | 0.830543 | 2.77E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene44017 | 0.817423 | 3.32E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44017.t1 | MTR_1g081280 | 90.071 | 141 | 14 | 0 | 1 | 141 | 1 | 141 | 4.51e-91 | 264 |
| MS.gene44017.t1 | MTR_1g081280 | 90.071 | 141 | 14 | 0 | 1 | 141 | 1 | 141 | 4.46e-90 | 262 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44017.t1 | AT3G04890 | 50.000 | 84 | 42 | 0 | 57 | 140 | 33 | 116 | 1.38e-23 | 92.0 |
| MS.gene44017.t1 | AT3G04890 | 50.000 | 84 | 42 | 0 | 57 | 140 | 33 | 116 | 1.43e-23 | 91.7 |
| MS.gene44017.t1 | AT3G04890 | 50.000 | 84 | 42 | 0 | 57 | 140 | 37 | 120 | 1.88e-23 | 91.7 |
| MS.gene44017.t1 | AT3G04890 | 50.000 | 84 | 42 | 0 | 57 | 140 | 37 | 120 | 2.08e-23 | 91.7 |
Find 28 sgRNAs with CRISPR-Local
Find 61 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATCATCAATACTTGAAAC+TGG | 0.314009 | 1.3:+57480384 | None:intergenic |
| GATCCAACTATTAAATTTAG+TGG | 0.322543 | 1.3:-57480103 | MS.gene44017:intron |
| GCAAAAGTCTTTCTGCTACT+TGG | 0.371862 | 1.3:+57480851 | None:intergenic |
| TTACCACTAAATTTAATAGT+TGG | 0.387007 | 1.3:+57480100 | None:intergenic |
| TGATGTTCTAATCATCATAA+AGG | 0.421681 | 1.3:-57480367 | MS.gene44017:CDS |
| TGGAAGTGTAAGGCTATTGT+AGG | 0.430972 | 1.3:+57481049 | None:intergenic |
| AGATACCTTGTTTGTTGAGG+AGG | 0.500425 | 1.3:+57480737 | None:intergenic |
| CATAGATACCTTGTTTGTTG+AGG | 0.512642 | 1.3:+57480734 | None:intergenic |
| GGAAGTGTAAGGCTATTGTA+GGG | 0.518951 | 1.3:+57481050 | None:intergenic |
| GAGGAGGAGAGAAAAGCCTC+AGG | 0.522489 | 1.3:+57480753 | None:intergenic |
| GGACGCCACCCTTGCTGTTG+CGG | 0.524042 | 1.3:-57480901 | MS.gene44017:CDS |
| AGAAAATAACGAAACCCCTC+AGG | 0.529785 | 1.3:-57480810 | MS.gene44017:CDS |
| AGACATTTATTACCTGGGAG+TGG | 0.539869 | 1.3:+57481029 | None:intergenic |
| CATCATCAATACTTGAAACT+GGG | 0.541779 | 1.3:+57480385 | None:intergenic |
| GCGGAGTGACGGAGCTCCTG+AGG | 0.554237 | 1.3:-57480769 | MS.gene44017:CDS |
| GATTGCAGTGAGCGGAGTGA+CGG | 0.565614 | 1.3:-57480780 | MS.gene44017:CDS |
| AGCCTTACACTTCCACTCCC+AGG | 0.566168 | 1.3:-57481041 | MS.gene44017:intron |
| TGTTTCCGCAACAGCAAGGG+TGG | 0.575559 | 1.3:+57480896 | None:intergenic |
| CTGCAATCTTCAGAACCTGA+GGG | 0.576531 | 1.3:+57480795 | None:intergenic |
| TCTCTCCTCCTCAACAAACA+AGG | 0.582792 | 1.3:-57480742 | MS.gene44017:intron |
| TGTTGTTTCCGCAACAGCAA+GGG | 0.587584 | 1.3:+57480893 | None:intergenic |
| GTGTTGTTTCCGCAACAGCA+AGG | 0.594278 | 1.3:+57480892 | None:intergenic |
| TACCTGGGAGTGGAAGTGTA+AGG | 0.601591 | 1.3:+57481039 | None:intergenic |
| ACTGCAATCTTCAGAACCTG+AGG | 0.643213 | 1.3:+57480794 | None:intergenic |
| ATCATCAATACTTGAAACTG+GGG | 0.643651 | 1.3:+57480386 | None:intergenic |
| GTTCTGAAGATTGCAGTGAG+CGG | 0.663984 | 1.3:-57480788 | MS.gene44017:CDS |
| TGCAATCTTCAGAACCTGAG+GGG | 0.670652 | 1.3:+57480796 | None:intergenic |
| GAAGTGTAAGGCTATTGTAG+GGG | 0.673629 | 1.3:+57481051 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAAAATATTTGATAAG+AGG | + | chr1.3:57480760-57480779 | None:intergenic | 15.0% |
| !! | GTAATTTAAGAAAATAAAAG+TGG | + | chr1.3:57480442-57480461 | None:intergenic | 15.0% |
| !! | TGAAAAAATATTTGATAAGA+GGG | + | chr1.3:57480759-57480778 | None:intergenic | 15.0% |
| !! | AACACTGCATATTAATAAAT+TGG | + | chr1.3:57480599-57480618 | None:intergenic | 20.0% |
| !! | AATAAAGACATTTATTACCT+GGG | + | chr1.3:57480018-57480037 | None:intergenic | 20.0% |
| !! | TTACCACTAAATTTAATAGT+TGG | + | chr1.3:57480942-57480961 | None:intergenic | 20.0% |
| !!! | TTAAAGATTTGAAACATCTA+GGG | + | chr1.3:57481085-57481104 | None:intergenic | 20.0% |
| ! | AGACTAGCATAAGTTATTAT+AGG | + | chr1.3:57480980-57480999 | None:intergenic | 25.0% |
| ! | GAATAAAGACATTTATTACC+TGG | + | chr1.3:57480019-57480038 | None:intergenic | 25.0% |
| ! | GATCCAACTATTAAATTTAG+TGG | - | chr1.3:57480936-57480955 | MS.gene44017:intron | 25.0% |
| ! | TGATGTTCTAATCATCATAA+AGG | - | chr1.3:57480672-57480691 | MS.gene44017:intron | 25.0% |
| !! | CTTACTTTGTTTGAGATTTA+GGG | - | chr1.3:57480871-57480890 | MS.gene44017:CDS | 25.0% |
| !! | GACTTTTGCAATTTATAACA+TGG | - | chr1.3:57480202-57480221 | MS.gene44017:intron | 25.0% |
| !! | TCTTACTTTGTTTGAGATTT+AGG | - | chr1.3:57480870-57480889 | MS.gene44017:CDS | 25.0% |
| ACATCATCAATACTTGAAAC+TGG | + | chr1.3:57480658-57480677 | None:intergenic | 30.0% | |
| ATCATCAATACTTGAAACTG+GGG | + | chr1.3:57480656-57480675 | None:intergenic | 30.0% | |
| CATCATCAATACTTGAAACT+GGG | + | chr1.3:57480657-57480676 | None:intergenic | 30.0% | |
| TTTAGATTACATGCCAGAAA+AGG | + | chr1.3:57480846-57480865 | None:intergenic | 30.0% | |
| ! | TTCAACATCATTTCCTTTTC+TGG | - | chr1.3:57480830-57480849 | MS.gene44017:CDS | 30.0% |
| CAACATTGACGCTTAAACTT+TGG | + | chr1.3:57480396-57480415 | None:intergenic | 35.0% | |
| CTGAATCTCTTGTTAAGACT+AGG | - | chr1.3:57480117-57480136 | MS.gene44017:CDS | 35.0% | |
| ! | CATAGATACCTTGTTTGTTG+AGG | + | chr1.3:57480308-57480327 | None:intergenic | 35.0% |
| ! | TCAGTCTGAAGTGGAATAAA+TGG | + | chr1.3:57480331-57480350 | None:intergenic | 35.0% |
| AAGATGTCTTCAGTCTGAAG+TGG | + | chr1.3:57480340-57480359 | None:intergenic | 40.0% | |
| ACACATACCAATGTCGACAT+TGG | - | chr1.3:57480370-57480389 | MS.gene44017:CDS | 40.0% | |
| AGAAAATAACGAAACCCCTC+AGG | - | chr1.3:57480229-57480248 | MS.gene44017:intron | 40.0% | |
| AGACATTTATTACCTGGGAG+TGG | + | chr1.3:57480013-57480032 | None:intergenic | 40.0% | |
| ATTACTACCAGTGTCATGTC+TGG | - | chr1.3:57480457-57480476 | MS.gene44017:intron | 40.0% | |
| CTTCAGACTGAAGACATCTT+CGG | - | chr1.3:57480340-57480359 | MS.gene44017:CDS | 40.0% | |
| GAAGTGTAAGGCTATTGTAG+GGG | + | chr1.3:57479991-57480010 | None:intergenic | 40.0% | |
| GCAAAAGTCTTTCTGCTACT+TGG | + | chr1.3:57480191-57480210 | None:intergenic | 40.0% | |
| ! | AGATACCTTGTTTGTTGAGG+AGG | + | chr1.3:57480305-57480324 | None:intergenic | 40.0% |
| ! | GCAAAAACATGCTGCTTCAA+CGG | - | chr1.3:57479960-57479979 | MS.gene44017:intron | 40.0% |
| ! | GCATAAGTTGACGATTAGTG+AGG | + | chr1.3:57480548-57480567 | None:intergenic | 40.0% |
| ! | GGAAGTGTAAGGCTATTGTA+GGG | + | chr1.3:57479992-57480011 | None:intergenic | 40.0% |
| ! | TGGAAGTGTAAGGCTATTGT+AGG | + | chr1.3:57479993-57480012 | None:intergenic | 40.0% |
| ACTGCAATCTTCAGAACCTG+AGG | + | chr1.3:57480248-57480267 | None:intergenic | 45.0% | |
| ACTTTGGCCAATGTCGACAT+TGG | + | chr1.3:57480380-57480399 | None:intergenic | 45.0% | |
| ATGCATATTTCCCTGGCAGT+TGG | + | chr1.3:57480524-57480543 | None:intergenic | 45.0% | |
| CTGCAATCTTCAGAACCTGA+GGG | + | chr1.3:57480247-57480266 | None:intergenic | 45.0% | |
| GGTGTATGTGTAAGAGGTAG+TGG | - | chr1.3:57480483-57480502 | MS.gene44017:intron | 45.0% | |
| GTGAGGAATGCATATTTCCC+TGG | + | chr1.3:57480531-57480550 | None:intergenic | 45.0% | |
| TCTCTCCTCCTCAACAAACA+AGG | - | chr1.3:57480297-57480316 | MS.gene44017:intron | 45.0% | |
| TGCAATCTTCAGAACCTGAG+GGG | + | chr1.3:57480246-57480265 | None:intergenic | 45.0% | |
| TGGTCTGGTGTATGTGTAAG+AGG | - | chr1.3:57480477-57480496 | MS.gene44017:intron | 45.0% | |
| ! | GAGGTAGTGGTTCATGTTGT+TGG | - | chr1.3:57480496-57480515 | MS.gene44017:intron | 45.0% |
| !! | GTTCTGAAGATTGCAGTGAG+CGG | - | chr1.3:57480251-57480270 | MS.gene44017:intron | 45.0% |
| !! | TGTTGTTTCCGCAACAGCAA+GGG | + | chr1.3:57480149-57480168 | None:intergenic | 45.0% |
| !!! | GACAGCGCTTATTTTGTCAC+AGG | - | chr1.3:57480703-57480722 | MS.gene44017:intron | 45.0% |
| GTTGTTGGAACCAACTGCCA+GGG | - | chr1.3:57480511-57480530 | MS.gene44017:intron | 50.0% | |
| TACCAGTGTCATGTCTGGTC+TGG | - | chr1.3:57480462-57480481 | MS.gene44017:intron | 50.0% | |
| TGTTGTTGGAACCAACTGCC+AGG | - | chr1.3:57480510-57480529 | MS.gene44017:intron | 50.0% | |
| ! | TACCTGGGAGTGGAAGTGTA+AGG | + | chr1.3:57480003-57480022 | None:intergenic | 50.0% |
| !! | GTGTTGTTTCCGCAACAGCA+AGG | + | chr1.3:57480150-57480169 | None:intergenic | 50.0% |
| AGCCTTACACTTCCACTCCC+AGG | - | chr1.3:57479998-57480017 | MS.gene44017:intron | 55.0% | |
| CACCAGACCAGACATGACAC+TGG | + | chr1.3:57480467-57480486 | None:intergenic | 55.0% | |
| GAGGAGGAGAGAAAAGCCTC+AGG | + | chr1.3:57480289-57480308 | None:intergenic | 55.0% | |
| GATTGCAGTGAGCGGAGTGA+CGG | - | chr1.3:57480259-57480278 | MS.gene44017:intron | 55.0% | |
| TGTTTCCGCAACAGCAAGGG+TGG | + | chr1.3:57480146-57480165 | None:intergenic | 55.0% | |
| !! | GGACGCCACCCTTGCTGTTG+CGG | - | chr1.3:57480138-57480157 | MS.gene44017:CDS | 65.0% |
| ! | GCGGAGTGACGGAGCTCCTG+AGG | - | chr1.3:57480270-57480289 | MS.gene44017:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57479957 | 57481104 | 57479957 | ID=MS.gene44017 |
| chr1.3 | mRNA | 57479957 | 57481104 | 57479957 | ID=MS.gene44017.t1;Parent=MS.gene44017 |
| chr1.3 | exon | 57481042 | 57481104 | 57481042 | ID=MS.gene44017.t1.exon1;Parent=MS.gene44017.t1 |
| chr1.3 | CDS | 57481042 | 57481104 | 57481042 | ID=cds.MS.gene44017.t1;Parent=MS.gene44017.t1 |
| chr1.3 | exon | 57480743 | 57480927 | 57480743 | ID=MS.gene44017.t1.exon2;Parent=MS.gene44017.t1 |
| chr1.3 | CDS | 57480743 | 57480927 | 57480743 | ID=cds.MS.gene44017.t1;Parent=MS.gene44017.t1 |
| chr1.3 | exon | 57480337 | 57480446 | 57480337 | ID=MS.gene44017.t1.exon3;Parent=MS.gene44017.t1 |
| chr1.3 | CDS | 57480337 | 57480446 | 57480337 | ID=cds.MS.gene44017.t1;Parent=MS.gene44017.t1 |
| chr1.3 | exon | 57480104 | 57480169 | 57480104 | ID=MS.gene44017.t1.exon4;Parent=MS.gene44017.t1 |
| chr1.3 | CDS | 57480104 | 57480169 | 57480104 | ID=cds.MS.gene44017.t1;Parent=MS.gene44017.t1 |
| chr1.3 | exon | 57479957 | 57479973 | 57479957 | ID=MS.gene44017.t1.exon5;Parent=MS.gene44017.t1 |
| chr1.3 | CDS | 57479957 | 57479973 | 57479957 | ID=cds.MS.gene44017.t1;Parent=MS.gene44017.t1 |
| Gene Sequence |
| Protein sequence |
