Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76500.t1 | XP_003597744.1 | 97.3 | 147 | 3 | 1 | 1 | 146 | 1 | 147 | 3.60E-72 | 280.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76500.t1 | Q9SUI6 | 79.5 | 146 | 29 | 1 | 1 | 146 | 1 | 145 | 1.9e-61 | 236.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76500.t1 | B7FN63 | 97.3 | 147 | 3 | 1 | 1 | 146 | 1 | 147 | 2.6e-72 | 280.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene76500 | 0.806728 | 7.15E-50 | -1.69E-46 |
MS.gene049171 | MS.gene76500 | 0.940807 | 1.24E-100 | -1.69E-46 |
MS.gene049173 | MS.gene76500 | 0.895388 | 1.00E-75 | -1.69E-46 |
MS.gene049217 | MS.gene76500 | 0.896198 | 4.65E-76 | -1.69E-46 |
MS.gene049222 | MS.gene76500 | 0.922004 | 1.73E-88 | -1.69E-46 |
MS.gene049232 | MS.gene76500 | 0.885774 | 6.09E-72 | -1.69E-46 |
MS.gene049259 | MS.gene76500 | -0.813352 | 2.67E-51 | -1.69E-46 |
MS.gene049281 | MS.gene76500 | -0.822612 | 2.16E-53 | -1.69E-46 |
MS.gene049285 | MS.gene76500 | 0.95879 | 9.83E-117 | -1.69E-46 |
MS.gene049320 | MS.gene76500 | 0.966132 | 1.63E-125 | -1.69E-46 |
MS.gene04938 | MS.gene76500 | 0.827555 | 1.47E-54 | -1.69E-46 |
MS.gene04939 | MS.gene76500 | 0.890979 | 6.03E-74 | -1.69E-46 |
MS.gene049483 | MS.gene76500 | -0.813362 | 2.66E-51 | -1.69E-46 |
MS.gene049609 | MS.gene76500 | 0.891615 | 3.38E-74 | -1.69E-46 |
MS.gene049611 | MS.gene76500 | -0.845279 | 4.48E-59 | -1.69E-46 |
MS.gene049627 | MS.gene76500 | 0.86056 | 1.90E-63 | -1.69E-46 |
MS.gene049633 | MS.gene76500 | 0.897816 | 9.73E-77 | -1.69E-46 |
MS.gene049634 | MS.gene76500 | -0.819733 | 9.95E-53 | -1.69E-46 |
MS.gene049805 | MS.gene76500 | 0.859264 | 4.66E-63 | -1.69E-46 |
MS.gene049865 | MS.gene76500 | 0.815215 | 1.04E-51 | -1.69E-46 |
MS.gene05010 | MS.gene76500 | 0.916154 | 2.50E-85 | -1.69E-46 |
MS.gene050163 | MS.gene76500 | 0.94571 | 1.83E-104 | -1.69E-46 |
MS.gene050165 | MS.gene76500 | 0.947722 | 3.86E-106 | -1.69E-46 |
MS.gene050170 | MS.gene76500 | 0.87184 | 5.03E-67 | -1.69E-46 |
MS.gene050173 | MS.gene76500 | -0.817436 | 3.30E-52 | -1.69E-46 |
MS.gene050216 | MS.gene76500 | 0.842088 | 3.20E-58 | -1.69E-46 |
MS.gene050323 | MS.gene76500 | 0.898693 | 4.13E-77 | -1.69E-46 |
MS.gene050333 | MS.gene76500 | 0.927967 | 5.61E-92 | -1.69E-46 |
MS.gene050353 | MS.gene76500 | -0.80376 | 2.99E-49 | -1.69E-46 |
MS.gene050381 | MS.gene76500 | -0.838472 | 2.82E-57 | -1.69E-46 |
MS.gene050444 | MS.gene76500 | 0.889769 | 1.80E-73 | -1.69E-46 |
MS.gene050475 | MS.gene76500 | -0.802564 | 5.29E-49 | -1.69E-46 |
MS.gene050496 | MS.gene76500 | 0.895285 | 1.11E-75 | -1.69E-46 |
MS.gene050504 | MS.gene76500 | 0.956276 | 4.31E-114 | -1.69E-46 |
MS.gene050518 | MS.gene76500 | 0.924997 | 3.33E-90 | -1.69E-46 |
MS.gene050538 | MS.gene76500 | 0.82772 | 1.34E-54 | -1.69E-46 |
MS.gene050577 | MS.gene76500 | 0.909309 | 6.57E-82 | -1.69E-46 |
MS.gene050593 | MS.gene76500 | 0.824408 | 8.20E-54 | -1.69E-46 |
MS.gene050612 | MS.gene76500 | 0.964757 | 9.92E-124 | -1.69E-46 |
MS.gene050647 | MS.gene76500 | -0.806556 | 7.77E-50 | -1.69E-46 |
MS.gene050662 | MS.gene76500 | 0.819485 | 1.13E-52 | -1.69E-46 |
MS.gene050675 | MS.gene76500 | 0.934639 | 2.96E-96 | -1.69E-46 |
MS.gene050690 | MS.gene76500 | 0.803544 | 3.31E-49 | -1.69E-46 |
MS.gene050699 | MS.gene76500 | 0.950845 | 7.08E-109 | -1.69E-46 |
MS.gene050747 | MS.gene76500 | 0.86815 | 8.09E-66 | -1.69E-46 |
MS.gene050772 | MS.gene76500 | 0.91976 | 3.01E-87 | -1.69E-46 |
MS.gene05079 | MS.gene76500 | -0.832999 | 6.86E-56 | -1.69E-46 |
MS.gene05080 | MS.gene76500 | 0.87868 | 2.31E-69 | -1.69E-46 |
MS.gene05081 | MS.gene76500 | 0.815503 | 8.94E-52 | -1.69E-46 |
MS.gene050832 | MS.gene76500 | -0.824144 | 9.47E-54 | -1.69E-46 |
MS.gene050833 | MS.gene76500 | -0.827753 | 1.31E-54 | -1.69E-46 |
MS.gene050868 | MS.gene76500 | 0.892209 | 1.96E-74 | -1.69E-46 |
MS.gene050871 | MS.gene76500 | 0.890039 | 1.41E-73 | -1.69E-46 |
MS.gene050876 | MS.gene76500 | 0.889044 | 3.44E-73 | -1.69E-46 |
MS.gene05087 | MS.gene76500 | 0.811095 | 8.31E-51 | -1.69E-46 |
MS.gene050883 | MS.gene76500 | -0.836337 | 9.93E-57 | -1.69E-46 |
MS.gene050904 | MS.gene76500 | 0.870457 | 1.44E-66 | -1.69E-46 |
MS.gene050950 | MS.gene76500 | 0.866135 | 3.56E-65 | -1.69E-46 |
MS.gene050986 | MS.gene76500 | 0.966242 | 1.17E-125 | -1.69E-46 |
MS.gene05100 | MS.gene76500 | 0.90342 | 3.53E-79 | -1.69E-46 |
MS.gene051044 | MS.gene76500 | -0.831365 | 1.74E-55 | -1.69E-46 |
MS.gene05104 | MS.gene76500 | -0.827719 | 1.34E-54 | -1.69E-46 |
MS.gene051127 | MS.gene76500 | -0.859808 | 3.20E-63 | -1.69E-46 |
MS.gene051138 | MS.gene76500 | -0.854402 | 1.26E-61 | -1.69E-46 |
MS.gene051228 | MS.gene76500 | 0.871253 | 7.86E-67 | -1.69E-46 |
MS.gene051268 | MS.gene76500 | 0.859954 | 2.89E-63 | -1.69E-46 |
MS.gene051317 | MS.gene76500 | 0.904274 | 1.46E-79 | -1.69E-46 |
MS.gene051336 | MS.gene76500 | 0.808041 | 3.76E-50 | -1.69E-46 |
MS.gene051364 | MS.gene76500 | -0.848107 | 7.57E-60 | -1.69E-46 |
MS.gene051366 | MS.gene76500 | -0.850323 | 1.83E-60 | -1.69E-46 |
MS.gene051367 | MS.gene76500 | -0.817606 | 3.02E-52 | -1.69E-46 |
MS.gene05141 | MS.gene76500 | -0.801315 | 9.54E-49 | -1.69E-46 |
MS.gene051509 | MS.gene76500 | 0.81344 | 2.56E-51 | -1.69E-46 |
MS.gene051551 | MS.gene76500 | 0.919277 | 5.50E-87 | -1.69E-46 |
MS.gene051564 | MS.gene76500 | 0.827089 | 1.90E-54 | -1.69E-46 |
MS.gene051566 | MS.gene76500 | 0.808945 | 2.41E-50 | -1.69E-46 |
MS.gene051617 | MS.gene76500 | 0.817033 | 4.07E-52 | -1.69E-46 |
MS.gene051651 | MS.gene76500 | -0.839407 | 1.61E-57 | -1.69E-46 |
MS.gene051666 | MS.gene76500 | 0.819405 | 1.18E-52 | -1.69E-46 |
MS.gene051694 | MS.gene76500 | 0.83585 | 1.32E-56 | -1.69E-46 |
MS.gene051810 | MS.gene76500 | 0.944829 | 9.47E-104 | -1.69E-46 |
MS.gene051838 | MS.gene76500 | 0.827661 | 1.38E-54 | -1.69E-46 |
MS.gene051858 | MS.gene76500 | 0.858344 | 8.79E-63 | -1.69E-46 |
MS.gene051874 | MS.gene76500 | 0.810315 | 1.23E-50 | -1.69E-46 |
MS.gene051946 | MS.gene76500 | -0.809061 | 2.28E-50 | -1.69E-46 |
MS.gene051949 | MS.gene76500 | 0.890196 | 1.23E-73 | -1.69E-46 |
MS.gene052129 | MS.gene76500 | -0.833312 | 5.73E-56 | -1.69E-46 |
MS.gene052164 | MS.gene76500 | 0.891694 | 3.14E-74 | -1.69E-46 |
MS.gene052271 | MS.gene76500 | 0.88536 | 8.70E-72 | -1.69E-46 |
MS.gene052379 | MS.gene76500 | 0.852 | 6.15E-61 | -1.69E-46 |
MS.gene052482 | MS.gene76500 | 0.873371 | 1.55E-67 | -1.69E-46 |
MS.gene052486 | MS.gene76500 | 0.884336 | 2.09E-71 | -1.69E-46 |
MS.gene052503 | MS.gene76500 | 0.879554 | 1.13E-69 | -1.69E-46 |
MS.gene052504 | MS.gene76500 | 0.809622 | 1.73E-50 | -1.69E-46 |
MS.gene052506 | MS.gene76500 | 0.841612 | 4.27E-58 | -1.69E-46 |
MS.gene052615 | MS.gene76500 | 0.889101 | 3.27E-73 | -1.69E-46 |
MS.gene052670 | MS.gene76500 | 0.828378 | 9.29E-55 | -1.69E-46 |
MS.gene052822 | MS.gene76500 | 0.860864 | 1.53E-63 | -1.69E-46 |
MS.gene052823 | MS.gene76500 | 0.877847 | 4.52E-69 | -1.69E-46 |
MS.gene052825 | MS.gene76500 | 0.871487 | 6.58E-67 | -1.69E-46 |
MS.gene052870 | MS.gene76500 | 0.831823 | 1.34E-55 | -1.69E-46 |
MS.gene052872 | MS.gene76500 | 0.852886 | 3.44E-61 | -1.69E-46 |
MS.gene052916 | MS.gene76500 | 0.878387 | 2.93E-69 | -1.69E-46 |
MS.gene052966 | MS.gene76500 | 0.903051 | 5.17E-79 | -1.69E-46 |
MS.gene053009 | MS.gene76500 | 0.818124 | 2.31E-52 | -1.69E-46 |
MS.gene053104 | MS.gene76500 | 0.82499 | 5.98E-54 | -1.69E-46 |
MS.gene053117 | MS.gene76500 | 0.813652 | 2.30E-51 | -1.69E-46 |
MS.gene053203 | MS.gene76500 | 0.899509 | 1.85E-77 | -1.69E-46 |
MS.gene053207 | MS.gene76500 | 0.880265 | 6.33E-70 | -1.69E-46 |
MS.gene053213 | MS.gene76500 | 0.925045 | 3.12E-90 | -1.69E-46 |
MS.gene053284 | MS.gene76500 | 0.827075 | 1.91E-54 | -1.69E-46 |
MS.gene053285 | MS.gene76500 | 0.81308 | 3.07E-51 | -1.69E-46 |
MS.gene053286 | MS.gene76500 | 0.92725 | 1.53E-91 | -1.69E-46 |
MS.gene053322 | MS.gene76500 | 0.827776 | 1.30E-54 | -1.69E-46 |
MS.gene053420 | MS.gene76500 | -0.858232 | 9.49E-63 | -1.69E-46 |
MS.gene053436 | MS.gene76500 | 0.854087 | 1.55E-61 | -1.69E-46 |
MS.gene053479 | MS.gene76500 | 0.854295 | 1.35E-61 | -1.69E-46 |
MS.gene053480 | MS.gene76500 | 0.869699 | 2.55E-66 | -1.69E-46 |
MS.gene053488 | MS.gene76500 | -0.823839 | 1.12E-53 | -1.69E-46 |
MS.gene053549 | MS.gene76500 | -0.819529 | 1.11E-52 | -1.69E-46 |
MS.gene053561 | MS.gene76500 | -0.851674 | 7.61E-61 | -1.69E-46 |
MS.gene053574 | MS.gene76500 | 0.885208 | 9.91E-72 | -1.69E-46 |
MS.gene053626 | MS.gene76500 | 0.823516 | 1.33E-53 | -1.69E-46 |
MS.gene053632 | MS.gene76500 | 0.905285 | 5.04E-80 | -1.69E-46 |
MS.gene053633 | MS.gene76500 | 0.806127 | 9.57E-50 | -1.69E-46 |
MS.gene053824 | MS.gene76500 | 0.881425 | 2.43E-70 | -1.69E-46 |
MS.gene053916 | MS.gene76500 | 0.866861 | 2.09E-65 | -1.69E-46 |
MS.gene054003 | MS.gene76500 | 0.80758 | 4.72E-50 | -1.69E-46 |
MS.gene054056 | MS.gene76500 | -0.811863 | 5.66E-51 | -1.69E-46 |
MS.gene054408 | MS.gene76500 | 0.854958 | 8.70E-62 | -1.69E-46 |
MS.gene054421 | MS.gene76500 | -0.801008 | 1.10E-48 | -1.69E-46 |
MS.gene054595 | MS.gene76500 | 0.883725 | 3.52E-71 | -1.69E-46 |
MS.gene054600 | MS.gene76500 | 0.929205 | 9.71E-93 | -1.69E-46 |
MS.gene054616 | MS.gene76500 | -0.839034 | 2.02E-57 | -1.69E-46 |
MS.gene054642 | MS.gene76500 | 0.939438 | 1.27E-99 | -1.69E-46 |
MS.gene054706 | MS.gene76500 | -0.839207 | 1.82E-57 | -1.69E-46 |
MS.gene054707 | MS.gene76500 | -0.811604 | 6.44E-51 | -1.69E-46 |
MS.gene054708 | MS.gene76500 | -0.819046 | 1.43E-52 | -1.69E-46 |
MS.gene05470 | MS.gene76500 | 0.912037 | 3.08E-83 | -1.69E-46 |
MS.gene054927 | MS.gene76500 | 0.83091 | 2.25E-55 | -1.69E-46 |
MS.gene05494 | MS.gene76500 | 0.803113 | 4.07E-49 | -1.69E-46 |
MS.gene054954 | MS.gene76500 | 0.958314 | 3.20E-116 | -1.69E-46 |
MS.gene054959 | MS.gene76500 | -0.833285 | 5.82E-56 | -1.69E-46 |
MS.gene05505 | MS.gene76500 | 0.821212 | 4.55E-53 | -1.69E-46 |
MS.gene055154 | MS.gene76500 | -0.86867 | 5.49E-66 | -1.69E-46 |
MS.gene055206 | MS.gene76500 | 0.867033 | 1.84E-65 | -1.69E-46 |
MS.gene055212 | MS.gene76500 | 0.865309 | 6.49E-65 | -1.69E-46 |
MS.gene055224 | MS.gene76500 | 0.826068 | 3.32E-54 | -1.69E-46 |
MS.gene055289 | MS.gene76500 | 0.836133 | 1.12E-56 | -1.69E-46 |
MS.gene055362 | MS.gene76500 | 0.975108 | 2.37E-139 | -1.69E-46 |
MS.gene055397 | MS.gene76500 | 0.812216 | 4.74E-51 | -1.69E-46 |
MS.gene055499 | MS.gene76500 | 0.838017 | 3.69E-57 | -1.69E-46 |
MS.gene055502 | MS.gene76500 | 0.941476 | 3.89E-101 | -1.69E-46 |
MS.gene055577 | MS.gene76500 | 0.915823 | 3.72E-85 | -1.69E-46 |
MS.gene055634 | MS.gene76500 | 0.839078 | 1.96E-57 | -1.69E-46 |
MS.gene055636 | MS.gene76500 | 0.846727 | 1.81E-59 | -1.69E-46 |
MS.gene055638 | MS.gene76500 | 0.8607 | 1.72E-63 | -1.69E-46 |
MS.gene055647 | MS.gene76500 | 0.841196 | 5.50E-58 | -1.69E-46 |
MS.gene055722 | MS.gene76500 | 0.89007 | 1.37E-73 | -1.69E-46 |
MS.gene055748 | MS.gene76500 | 0.910113 | 2.69E-82 | -1.69E-46 |
MS.gene055750 | MS.gene76500 | 0.897772 | 1.02E-76 | -1.69E-46 |
MS.gene055751 | MS.gene76500 | 0.917566 | 4.54E-86 | -1.69E-46 |
MS.gene055776 | MS.gene76500 | 0.92741 | 1.22E-91 | -1.69E-46 |
MS.gene055849 | MS.gene76500 | 0.841369 | 4.96E-58 | -1.69E-46 |
MS.gene05589 | MS.gene76500 | 0.911143 | 8.49E-83 | -1.69E-46 |
MS.gene05592 | MS.gene76500 | 0.834792 | 2.44E-56 | -1.69E-46 |
MS.gene055941 | MS.gene76500 | 0.878957 | 1.84E-69 | -1.69E-46 |
MS.gene055942 | MS.gene76500 | -0.843196 | 1.63E-58 | -1.69E-46 |
MS.gene055956 | MS.gene76500 | -0.852539 | 4.32E-61 | -1.69E-46 |
MS.gene056046 | MS.gene76500 | 0.839787 | 1.29E-57 | -1.69E-46 |
MS.gene056083 | MS.gene76500 | 0.858591 | 7.42E-63 | -1.69E-46 |
MS.gene056224 | MS.gene76500 | -0.821268 | 4.42E-53 | -1.69E-46 |
MS.gene056359 | MS.gene76500 | -0.810405 | 1.17E-50 | -1.69E-46 |
MS.gene056374 | MS.gene76500 | 0.904502 | 1.15E-79 | -1.69E-46 |
MS.gene056387 | MS.gene76500 | 0.826622 | 2.45E-54 | -1.69E-46 |
MS.gene056409 | MS.gene76500 | 0.830328 | 3.12E-55 | -1.69E-46 |
MS.gene056446 | MS.gene76500 | 0.815487 | 9.01E-52 | -1.69E-46 |
MS.gene056449 | MS.gene76500 | 0.839448 | 1.57E-57 | -1.69E-46 |
MS.gene056450 | MS.gene76500 | 0.824811 | 6.59E-54 | -1.69E-46 |
MS.gene056487 | MS.gene76500 | 0.820567 | 6.41E-53 | -1.69E-46 |
MS.gene056504 | MS.gene76500 | 0.944076 | 3.78E-103 | -1.69E-46 |
MS.gene056510 | MS.gene76500 | 0.936847 | 9.01E-98 | -1.69E-46 |
MS.gene056549 | MS.gene76500 | 0.842307 | 2.80E-58 | -1.69E-46 |
MS.gene056550 | MS.gene76500 | -0.851593 | 8.02E-61 | -1.69E-46 |
MS.gene056610 | MS.gene76500 | 0.830393 | 3.01E-55 | -1.69E-46 |
MS.gene056657 | MS.gene76500 | 0.958633 | 1.45E-116 | -1.69E-46 |
MS.gene056692 | MS.gene76500 | 0.904236 | 1.52E-79 | -1.69E-46 |
MS.gene056761 | MS.gene76500 | -0.82343 | 1.39E-53 | -1.69E-46 |
MS.gene056856 | MS.gene76500 | -0.826657 | 2.41E-54 | -1.69E-46 |
MS.gene056857 | MS.gene76500 | -0.814991 | 1.16E-51 | -1.69E-46 |
MS.gene056878 | MS.gene76500 | 0.813111 | 3.02E-51 | -1.69E-46 |
MS.gene056898 | MS.gene76500 | 0.851172 | 1.05E-60 | -1.69E-46 |
MS.gene056946 | MS.gene76500 | 0.833909 | 4.07E-56 | -1.69E-46 |
MS.gene057014 | MS.gene76500 | -0.838374 | 2.99E-57 | -1.69E-46 |
MS.gene057048 | MS.gene76500 | 0.801414 | 9.11E-49 | -1.69E-46 |
MS.gene057076 | MS.gene76500 | 0.852683 | 3.93E-61 | -1.69E-46 |
MS.gene057086 | MS.gene76500 | 0.815751 | 7.87E-52 | -1.69E-46 |
MS.gene057129 | MS.gene76500 | 0.855542 | 5.88E-62 | -1.69E-46 |
MS.gene057246 | MS.gene76500 | 0.828121 | 1.07E-54 | -1.69E-46 |
MS.gene057331 | MS.gene76500 | 0.865036 | 7.90E-65 | -1.69E-46 |
MS.gene057416 | MS.gene76500 | 0.883029 | 6.34E-71 | -1.69E-46 |
MS.gene05753 | MS.gene76500 | 0.828193 | 1.03E-54 | -1.69E-46 |
MS.gene057658 | MS.gene76500 | 0.87181 | 5.15E-67 | -1.69E-46 |
MS.gene057805 | MS.gene76500 | 0.821421 | 4.07E-53 | -1.69E-46 |
MS.gene057831 | MS.gene76500 | 0.89125 | 4.72E-74 | -1.69E-46 |
MS.gene057856 | MS.gene76500 | 0.802762 | 4.81E-49 | -1.69E-46 |
MS.gene057857 | MS.gene76500 | 0.835082 | 2.06E-56 | -1.69E-46 |
MS.gene05787 | MS.gene76500 | 0.819901 | 9.10E-53 | -1.69E-46 |
MS.gene057926 | MS.gene76500 | 0.829417 | 5.21E-55 | -1.69E-46 |
MS.gene057986 | MS.gene76500 | 0.823621 | 1.26E-53 | -1.69E-46 |
MS.gene058019 | MS.gene76500 | 0.833467 | 5.25E-56 | -1.69E-46 |
MS.gene058068 | MS.gene76500 | -0.820298 | 7.38E-53 | -1.69E-46 |
MS.gene058111 | MS.gene76500 | -0.809367 | 1.96E-50 | -1.69E-46 |
MS.gene058117 | MS.gene76500 | -0.82261 | 2.16E-53 | -1.69E-46 |
MS.gene058130 | MS.gene76500 | 0.816974 | 4.19E-52 | -1.69E-46 |
MS.gene058157 | MS.gene76500 | 0.822442 | 2.36E-53 | -1.69E-46 |
MS.gene058171 | MS.gene76500 | -0.812096 | 5.03E-51 | -1.69E-46 |
MS.gene058175 | MS.gene76500 | -0.814266 | 1.68E-51 | -1.69E-46 |
MS.gene058268 | MS.gene76500 | -0.823104 | 1.66E-53 | -1.69E-46 |
MS.gene058269 | MS.gene76500 | -0.826807 | 2.21E-54 | -1.69E-46 |
MS.gene058323 | MS.gene76500 | 0.819616 | 1.06E-52 | -1.69E-46 |
MS.gene058334 | MS.gene76500 | -0.863677 | 2.10E-64 | -1.69E-46 |
MS.gene058335 | MS.gene76500 | 0.83744 | 5.19E-57 | -1.69E-46 |
MS.gene058338 | MS.gene76500 | 0.861675 | 8.68E-64 | -1.69E-46 |
MS.gene05837 | MS.gene76500 | 0.878527 | 2.61E-69 | -1.69E-46 |
MS.gene058419 | MS.gene76500 | 0.954584 | 2.13E-112 | -1.69E-46 |
MS.gene058544 | MS.gene76500 | 0.913633 | 4.91E-84 | -1.69E-46 |
MS.gene058603 | MS.gene76500 | -0.828478 | 8.79E-55 | -1.69E-46 |
MS.gene058719 | MS.gene76500 | 0.853223 | 2.75E-61 | -1.69E-46 |
MS.gene058723 | MS.gene76500 | 0.903456 | 3.40E-79 | -1.69E-46 |
MS.gene058773 | MS.gene76500 | 0.939135 | 2.11E-99 | -1.69E-46 |
MS.gene058838 | MS.gene76500 | 0.896893 | 2.38E-76 | -1.69E-46 |
MS.gene05883 | MS.gene76500 | 0.816437 | 5.53E-52 | -1.69E-46 |
MS.gene058978 | MS.gene76500 | -0.822891 | 1.86E-53 | -1.69E-46 |
MS.gene059022 | MS.gene76500 | 0.985075 | 1.88E-162 | -1.69E-46 |
MS.gene059023 | MS.gene76500 | 0.911703 | 4.50E-83 | -1.69E-46 |
MS.gene059029 | MS.gene76500 | 0.866583 | 2.56E-65 | -1.69E-46 |
MS.gene059079 | MS.gene76500 | 0.824759 | 6.78E-54 | -1.69E-46 |
MS.gene05912 | MS.gene76500 | 0.847482 | 1.12E-59 | -1.69E-46 |
MS.gene05913 | MS.gene76500 | 0.879809 | 9.20E-70 | -1.69E-46 |
MS.gene05914 | MS.gene76500 | 0.835493 | 1.62E-56 | -1.69E-46 |
MS.gene059305 | MS.gene76500 | 0.804288 | 2.32E-49 | -1.69E-46 |
MS.gene05934 | MS.gene76500 | 0.830973 | 2.17E-55 | -1.69E-46 |
MS.gene059367 | MS.gene76500 | 0.844888 | 5.72E-59 | -1.69E-46 |
MS.gene059536 | MS.gene76500 | 0.806233 | 9.08E-50 | -1.69E-46 |
MS.gene059667 | MS.gene76500 | 0.843087 | 1.74E-58 | -1.69E-46 |
MS.gene059677 | MS.gene76500 | 0.971001 | 1.76E-132 | -1.69E-46 |
MS.gene059699 | MS.gene76500 | -0.800376 | 1.48E-48 | -1.69E-46 |
MS.gene059703 | MS.gene76500 | -0.808269 | 3.36E-50 | -1.69E-46 |
MS.gene059718 | MS.gene76500 | 0.938585 | 5.27E-99 | -1.69E-46 |
MS.gene059756 | MS.gene76500 | 0.898542 | 4.79E-77 | -1.69E-46 |
MS.gene059801 | MS.gene76500 | 0.859409 | 4.22E-63 | -1.69E-46 |
MS.gene059837 | MS.gene76500 | 0.846962 | 1.56E-59 | -1.69E-46 |
MS.gene059858 | MS.gene76500 | 0.812226 | 4.72E-51 | -1.69E-46 |
MS.gene059865 | MS.gene76500 | 0.944468 | 1.85E-103 | -1.69E-46 |
MS.gene059902 | MS.gene76500 | 0.853667 | 2.05E-61 | -1.69E-46 |
MS.gene059916 | MS.gene76500 | -0.816164 | 6.37E-52 | -1.69E-46 |
MS.gene059955 | MS.gene76500 | -0.801345 | 9.41E-49 | -1.69E-46 |
MS.gene059960 | MS.gene76500 | 0.814162 | 1.77E-51 | -1.69E-46 |
MS.gene06000 | MS.gene76500 | 0.867561 | 1.25E-65 | -1.69E-46 |
MS.gene060337 | MS.gene76500 | -0.842718 | 2.18E-58 | -1.69E-46 |
MS.gene060341 | MS.gene76500 | 0.868778 | 5.07E-66 | -1.69E-46 |
MS.gene060482 | MS.gene76500 | 0.849582 | 2.95E-60 | -1.69E-46 |
MS.gene060526 | MS.gene76500 | 0.806285 | 8.86E-50 | -1.69E-46 |
MS.gene060595 | MS.gene76500 | -0.826385 | 2.79E-54 | -1.69E-46 |
MS.gene060602 | MS.gene76500 | -0.804119 | 2.52E-49 | -1.69E-46 |
MS.gene060703 | MS.gene76500 | 0.926463 | 4.53E-91 | -1.69E-46 |
MS.gene060727 | MS.gene76500 | 0.827736 | 1.33E-54 | -1.69E-46 |
MS.gene060728 | MS.gene76500 | 0.86071 | 1.71E-63 | -1.69E-46 |
MS.gene060762 | MS.gene76500 | 0.935588 | 6.70E-97 | -1.69E-46 |
MS.gene060778 | MS.gene76500 | 0.889979 | 1.49E-73 | -1.69E-46 |
MS.gene06077 | MS.gene76500 | 0.939644 | 8.98E-100 | -1.69E-46 |
MS.gene060804 | MS.gene76500 | 0.805293 | 1.43E-49 | -1.69E-46 |
MS.gene060823 | MS.gene76500 | -0.840967 | 6.32E-58 | -1.69E-46 |
MS.gene060835 | MS.gene76500 | 0.838888 | 2.20E-57 | -1.69E-46 |
MS.gene06092 | MS.gene76500 | 0.86766 | 1.16E-65 | -1.69E-46 |
MS.gene060982 | MS.gene76500 | 0.913461 | 5.99E-84 | -1.69E-46 |
MS.gene061041 | MS.gene76500 | 0.807789 | 4.26E-50 | -1.69E-46 |
MS.gene061044 | MS.gene76500 | -0.822894 | 1.86E-53 | -1.69E-46 |
MS.gene061134 | MS.gene76500 | 0.83454 | 2.82E-56 | -1.69E-46 |
MS.gene061150 | MS.gene76500 | 0.915433 | 5.92E-85 | -1.69E-46 |
MS.gene061171 | MS.gene76500 | 0.822242 | 2.63E-53 | -1.69E-46 |
MS.gene061200 | MS.gene76500 | 0.834043 | 3.77E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76500.t1 | MTR_2g101820 | 97.279 | 147 | 3 | 1 | 1 | 146 | 1 | 147 | 5.34e-99 | 281 |
MS.gene76500.t1 | MTR_2g101820 | 95.455 | 88 | 3 | 1 | 1 | 87 | 1 | 88 | 3.48e-55 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76500.t1 | AT1G52230 | 79.452 | 146 | 29 | 1 | 1 | 146 | 1 | 145 | 2.10e-81 | 236 |
MS.gene76500.t1 | AT3G16140 | 78.082 | 146 | 31 | 1 | 1 | 146 | 1 | 145 | 7.76e-80 | 232 |
Find 45 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTCAAATCCAAGAATTTA+AGG | 0.134528 | 2.3:-2343118 | MS.gene76500:intron |
GTGAAAGTACCTTAAATTCT+TGG | 0.244082 | 2.3:+2343109 | None:intergenic |
CTTGCTGGCAGTTCCATTAC+TGG | 0.265222 | 2.3:-2343173 | MS.gene76500:CDS |
TACTTCAGTGCCACAGCTTC+AGG | 0.317013 | 2.3:-2341846 | MS.gene76500:CDS |
TACTTTGATTTGGAGGATAT+TGG | 0.323961 | 2.3:-2342785 | MS.gene76500:CDS |
CAAGAGTGTGTACTTTGATT+TGG | 0.336220 | 2.3:-2342795 | MS.gene76500:CDS |
TTGCCACGGGGACCGAGCTT+TGG | 0.360365 | 2.3:+2341786 | None:intergenic |
CTCAATGTTAAGGGTCTTGC+TGG | 0.365303 | 2.3:-2343188 | MS.gene76500:CDS |
CTCACCATACAACCCTCTTC+AGG | 0.381984 | 2.3:-2342720 | MS.gene76500:intron |
ACCAGCTGGTCTCAATGTTA+AGG | 0.384673 | 2.3:-2343198 | MS.gene76500:CDS |
CCACGGGGACCGAGCTTTGG+TGG | 0.404075 | 2.3:+2341789 | None:intergenic |
GGCTCTGTGGTAGCAAAGTA+TGG | 0.420308 | 2.3:-2342821 | MS.gene76500:CDS |
AGCTGTGGACCTTTCTTGAT+TGG | 0.426964 | 2.3:+2341813 | None:intergenic |
CCAGCTGGTCTCAATGTTAA+GGG | 0.447321 | 2.3:-2343197 | MS.gene76500:CDS |
GAGTGTGTACTTTGATTTGG+AGG | 0.467087 | 2.3:-2342792 | MS.gene76500:CDS |
GAGGATATTGGCAACACTAC+AGG | 0.483887 | 2.3:-2342773 | MS.gene76500:CDS |
AATTCTTGGATTTGAAACTC+TGG | 0.485960 | 2.3:+2343123 | None:intergenic |
CAAACCTGAAGAGGGTTGTA+TGG | 0.501808 | 2.3:+2342716 | None:intergenic |
CAAGAGTTGAACCACCTCCT+AGG | 0.515089 | 2.3:+2341871 | None:intergenic |
AATAATCCTCTCTTTGTGAA+TGG | 0.515909 | 2.3:+2341909 | None:intergenic |
CCCTTAACATTGAGACCAGC+TGG | 0.523582 | 2.3:+2343197 | None:intergenic |
CCGAGCTTTGGTGGAAGCTG+TGG | 0.524654 | 2.3:+2341798 | None:intergenic |
GACATTCTACCAATCAAGAA+AGG | 0.540823 | 2.3:-2341822 | MS.gene76500:CDS |
AGATAGCTTAGTTCCAGTAA+TGG | 0.548416 | 2.3:+2343160 | None:intergenic |
AGCTGGTTGTACACAAGCTA+AGG | 0.551993 | 2.3:+2343214 | None:intergenic |
GCAGCTCCATTCACAAAGAG+AGG | 0.555627 | 2.3:-2341915 | MS.gene76500:CDS |
TCCAGTAGACAAACCTGAAG+AGG | 0.558714 | 2.3:+2342707 | None:intergenic |
ACAGGTCAGTGGGATTTGTA+CGG | 0.573529 | 2.3:-2342755 | MS.gene76500:CDS |
TTAGCTTGTGTACAACCAGC+TGG | 0.579471 | 2.3:-2343212 | MS.gene76500:CDS |
GTACACAAGCTAAGGTAGCA+AGG | 0.579499 | 2.3:+2343222 | None:intergenic |
GATTTGAAACTCTGGCGAGA+GGG | 0.583566 | 2.3:+2343131 | None:intergenic |
CCACAGCTTCCACCAAAGCT+CGG | 0.583979 | 2.3:-2341798 | MS.gene76500:CDS |
AACTAAATTAGATCTTGCCA+CGG | 0.594009 | 2.3:+2341772 | None:intergenic |
TGGCAACACTACAGGTCAGT+GGG | 0.596869 | 2.3:-2342765 | MS.gene76500:CDS |
ACTAAATTAGATCTTGCCAC+GGG | 0.597169 | 2.3:+2341773 | None:intergenic |
GGATTTGAAACTCTGGCGAG+AGG | 0.599558 | 2.3:+2343130 | None:intergenic |
CCAGTAGACAAACCTGAAGA+GGG | 0.614925 | 2.3:+2342708 | None:intergenic |
TACACAAGCTAAGGTAGCAA+GGG | 0.622521 | 2.3:+2343223 | None:intergenic |
TGAAGAGGGTTGTATGGTGA+GGG | 0.652580 | 2.3:+2342722 | None:intergenic |
AACTTGCAGGAGTGGCTCTG+TGG | 0.654086 | 2.3:-2342834 | MS.gene76500:intron |
CCACCAAAGCTCGGTCCCCG+TGG | 0.657534 | 2.3:-2341789 | MS.gene76500:CDS |
TTGGCAACACTACAGGTCAG+TGG | 0.661910 | 2.3:-2342766 | MS.gene76500:CDS |
TAGAATGTCACCTGAAGCTG+TGG | 0.676047 | 2.3:+2341836 | None:intergenic |
CTGAAGAGGGTTGTATGGTG+AGG | 0.677728 | 2.3:+2342721 | None:intergenic |
CTAAATTAGATCTTGCCACG+GGG | 0.688209 | 2.3:+2341774 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAACTTATCTAATCTAAAT+AGG | + | chr2.3:2342073-2342092 | None:intergenic | 15.0% |
!! | ATCAAAGAAATCAATTAATT+TGG | + | chr2.3:2342955-2342974 | None:intergenic | 15.0% |
!! | TTATATTAAGTGTCTTTATA+AGG | - | chr2.3:2342653-2342672 | MS.gene76500:intron | 15.0% |
!! | TTTAATATGAGAATGATTTA+TGG | - | chr2.3:2342904-2342923 | MS.gene76500:intron | 15.0% |
!! | AATAAGCTGAAAATAACTTA+TGG | - | chr2.3:2342556-2342575 | MS.gene76500:intron | 20.0% |
!! | ACATTAGCGTAATAAAAAAA+CGG | + | chr2.3:2341979-2341998 | None:intergenic | 20.0% |
!! | TAGATCAACAAAATAATCTA+TGG | + | chr2.3:2342418-2342437 | None:intergenic | 20.0% |
!!! | AAATGTAATTAGTTCTTCAT+TGG | - | chr2.3:2342829-2342848 | MS.gene76500:intron | 20.0% |
!!! | CTTATTTTCATAAGTTTTTC+AGG | + | chr2.3:2342542-2342561 | None:intergenic | 20.0% |
!!! | CTTCTTGTTTTCTTATAATA+AGG | + | chr2.3:2342770-2342789 | None:intergenic | 20.0% |
! | GTTTCAAATCCAAGAATTTA+AGG | - | chr2.3:2341891-2341910 | MS.gene76500:CDS | 25.0% |
!! | TGTTTTCTTATAATAAGGAC+TGG | + | chr2.3:2342765-2342784 | None:intergenic | 25.0% |
!!! | ACATAACATAATTAACTTGC+AGG | - | chr2.3:2342162-2342181 | MS.gene76500:intron | 25.0% |
AATAATCCTCTCTTTGTGAA+TGG | + | chr2.3:2343103-2343122 | None:intergenic | 30.0% | |
AGACACTTAATATAACACAG+AGG | + | chr2.3:2342648-2342667 | None:intergenic | 30.0% | |
AGTGATGTTTATATGTGTCT+AGG | - | chr2.3:2342382-2342401 | MS.gene76500:intron | 30.0% | |
GACACTTAATATAACACAGA+GGG | + | chr2.3:2342647-2342666 | None:intergenic | 30.0% | |
! | AATTCTTGGATTTGAAACTC+TGG | + | chr2.3:2341889-2341908 | None:intergenic | 30.0% |
!! | GTGAAAGTACCTTAAATTCT+TGG | + | chr2.3:2341903-2341922 | None:intergenic | 30.0% |
!! | TACTTTGATTTGGAGGATAT+TGG | - | chr2.3:2342224-2342243 | MS.gene76500:intron | 30.0% |
AGATAGCTTAGTTCCAGTAA+TGG | + | chr2.3:2341852-2341871 | None:intergenic | 35.0% | |
GACATTCTACCAATCAAGAA+AGG | - | chr2.3:2343187-2343206 | MS.gene76500:CDS | 35.0% | |
GTTTATATGTGTCTAGGCTT+AGG | - | chr2.3:2342388-2342407 | MS.gene76500:intron | 35.0% | |
TATAGTCTATAGGACAGCAA+AGG | + | chr2.3:2342622-2342641 | None:intergenic | 35.0% | |
! | CAAGAGTGTGTACTTTGATT+TGG | - | chr2.3:2342214-2342233 | MS.gene76500:intron | 35.0% |
! | TTGCTCAAGTTTTTGATCCT+AGG | - | chr2.3:2343121-2343140 | MS.gene76500:CDS | 35.0% |
!! | ACATAATTAACTTGCAGGAG+TGG | - | chr2.3:2342167-2342186 | MS.gene76500:intron | 35.0% |
AAAAAACGGACAGACGAGTA+TGG | + | chr2.3:2341965-2341984 | None:intergenic | 40.0% | |
ATATGTGTCTAGGCTTAGGA+AGG | - | chr2.3:2342392-2342411 | MS.gene76500:intron | 40.0% | |
CACTAGCTACTACTTTAGCA+AGG | + | chr2.3:2342796-2342815 | None:intergenic | 40.0% | |
TACACAAGCTAAGGTAGCAA+GGG | + | chr2.3:2341789-2341808 | None:intergenic | 40.0% | |
! | AAGTTTTTGATCCTAGGAGG+TGG | - | chr2.3:2343127-2343146 | MS.gene76500:CDS | 40.0% |
! | ACAGAGGGAGTATAGTCTAT+AGG | + | chr2.3:2342632-2342651 | None:intergenic | 40.0% |
! | CTCAAGTTTTTGATCCTAGG+AGG | - | chr2.3:2343124-2343143 | MS.gene76500:CDS | 40.0% |
!! | GAGTGTGTACTTTGATTTGG+AGG | - | chr2.3:2342217-2342236 | MS.gene76500:intron | 40.0% |
ACAGGTCAGTGGGATTTGTA+CGG | - | chr2.3:2342254-2342273 | MS.gene76500:intron | 45.0% | |
AGCTGGTTGTACACAAGCTA+AGG | + | chr2.3:2341798-2341817 | None:intergenic | 45.0% | |
AGCTGTGGACCTTTCTTGAT+TGG | + | chr2.3:2343199-2343218 | None:intergenic | 45.0% | |
AGTCTATAGGACAGCAAAGG+AGG | + | chr2.3:2342619-2342638 | None:intergenic | 45.0% | |
CAAACCTGAAGAGGGTTGTA+TGG | + | chr2.3:2342296-2342315 | None:intergenic | 45.0% | |
CCAGTAGACAAACCTGAAGA+GGG | + | chr2.3:2342304-2342323 | None:intergenic | 45.0% | |
CTCAATGTTAAGGGTCTTGC+TGG | - | chr2.3:2341821-2341840 | MS.gene76500:CDS | 45.0% | |
GAGGATATTGGCAACACTAC+AGG | - | chr2.3:2342236-2342255 | MS.gene76500:intron | 45.0% | |
GTACACAAGCTAAGGTAGCA+AGG | + | chr2.3:2341790-2341809 | None:intergenic | 45.0% | |
TAGAATGTCACCTGAAGCTG+TGG | + | chr2.3:2343176-2343195 | None:intergenic | 45.0% | |
TCCAGTAGACAAACCTGAAG+AGG | + | chr2.3:2342305-2342324 | None:intergenic | 45.0% | |
TGAAGAGGGTTGTATGGTGA+GGG | + | chr2.3:2342290-2342309 | None:intergenic | 45.0% | |
! | ACCAGCTGGTCTCAATGTTA+AGG | - | chr2.3:2341811-2341830 | MS.gene76500:CDS | 45.0% |
! | CCAGCTGGTCTCAATGTTAA+GGG | - | chr2.3:2341812-2341831 | MS.gene76500:CDS | 45.0% |
! | GATTTGAAACTCTGGCGAGA+GGG | + | chr2.3:2341881-2341900 | None:intergenic | 45.0% |
!! | TTAGCTTGTGTACAACCAGC+TGG | - | chr2.3:2341797-2341816 | MS.gene76500:CDS | 45.0% |
CAAGAGTTGAACCACCTCCT+AGG | + | chr2.3:2343141-2343160 | None:intergenic | 50.0% | |
CCCTTAACATTGAGACCAGC+TGG | + | chr2.3:2341815-2341834 | None:intergenic | 50.0% | |
CTCACCATACAACCCTCTTC+AGG | - | chr2.3:2342289-2342308 | MS.gene76500:intron | 50.0% | |
CTGAAGAGGGTTGTATGGTG+AGG | + | chr2.3:2342291-2342310 | None:intergenic | 50.0% | |
CTTGCTGGCAGTTCCATTAC+TGG | - | chr2.3:2341836-2341855 | MS.gene76500:CDS | 50.0% | |
GCAGCTCCATTCACAAAGAG+AGG | - | chr2.3:2343094-2343113 | MS.gene76500:intron | 50.0% | |
GGCTCTGTGGTAGCAAAGTA+TGG | - | chr2.3:2342188-2342207 | MS.gene76500:intron | 50.0% | |
TACTTCAGTGCCACAGCTTC+AGG | - | chr2.3:2343163-2343182 | MS.gene76500:CDS | 50.0% | |
TGGCAACACTACAGGTCAGT+GGG | - | chr2.3:2342244-2342263 | MS.gene76500:intron | 50.0% | |
TTGGCAACACTACAGGTCAG+TGG | - | chr2.3:2342243-2342262 | MS.gene76500:intron | 50.0% | |
! | CCCTCTTCAGGTTTGTCTAC+TGG | - | chr2.3:2342301-2342320 | MS.gene76500:intron | 50.0% |
! | GGATTTGAAACTCTGGCGAG+AGG | + | chr2.3:2341882-2341901 | None:intergenic | 50.0% |
CCACAGCTTCCACCAAAGCT+CGG | - | chr2.3:2343211-2343230 | MS.gene76500:CDS | 55.0% | |
! | AACTTGCAGGAGTGGCTCTG+TGG | - | chr2.3:2342175-2342194 | MS.gene76500:intron | 55.0% |
! | CCGAGCTTTGGTGGAAGCTG+TGG | + | chr2.3:2343214-2343233 | None:intergenic | 60.0% |
TTGCCACGGGGACCGAGCTT+TGG | + | chr2.3:2343226-2343245 | None:intergenic | 65.0% | |
CCACCAAAGCTCGGTCCCCG+TGG | - | chr2.3:2343220-2343239 | MS.gene76500:CDS | 70.0% | |
! | CCACGGGGACCGAGCTTTGG+TGG | + | chr2.3:2343223-2343242 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 2341779 | 2343252 | 2341779 | ID=MS.gene76500 |
chr2.3 | mRNA | 2341779 | 2343252 | 2341779 | ID=MS.gene76500.t1;Parent=MS.gene76500 |
chr2.3 | exon | 2343119 | 2343252 | 2343119 | ID=MS.gene76500.t1.exon1;Parent=MS.gene76500.t1 |
chr2.3 | CDS | 2343119 | 2343252 | 2343119 | ID=cds.MS.gene76500.t1;Parent=MS.gene76500.t1 |
chr2.3 | exon | 2342721 | 2342847 | 2342721 | ID=MS.gene76500.t1.exon2;Parent=MS.gene76500.t1 |
chr2.3 | CDS | 2342721 | 2342847 | 2342721 | ID=cds.MS.gene76500.t1;Parent=MS.gene76500.t1 |
chr2.3 | exon | 2341779 | 2341958 | 2341779 | ID=MS.gene76500.t1.exon3;Parent=MS.gene76500.t1 |
chr2.3 | CDS | 2341779 | 2341958 | 2341779 | ID=cds.MS.gene76500.t1;Parent=MS.gene76500.t1 |
Gene Sequence |
Protein sequence |