AlfalfaGEDB | MS.gene06408

M. sativa cultivar XinJiangDaYe / MS.gene06408

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005886 GO:0008150 GO:0008152 GO:0016020 GO:0016491 GO:0016651 GO:0016655 GO:0055114 GO:0110165
PFAM: PF11910.11

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06408.t1	ACJ85995.1	90.9	165	9	1	1	165	9	167	7.50E-66	260

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06408.t1	Q9S829	87.6	89	11	0	77	165	70	158	8.4e-42	171.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06408.t1	B7FML2	90.9	165	9	1	1	165	9	167	5.4e-66	260.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene06408	0.841657	4.16E-58	-1.69E-46
MS.gene049171	MS.gene06408	0.948002	2.23E-106	-1.69E-46
MS.gene049173	MS.gene06408	0.890149	1.28E-73	-1.69E-46
MS.gene049217	MS.gene06408	0.918584	1.30E-86	-1.69E-46
MS.gene049222	MS.gene06408	0.936771	1.02E-97	-1.69E-46
MS.gene049232	MS.gene06408	0.906582	1.27E-80	-1.69E-46
MS.gene049281	MS.gene06408	-0.820026	8.53E-53	-1.69E-46
MS.gene049285	MS.gene06408	0.995871	8.38E-221	-1.69E-46
MS.gene049320	MS.gene06408	0.963816	1.50E-122	-1.69E-46
MS.gene04938	MS.gene06408	0.803017	4.26E-49	-1.69E-46
MS.gene04939	MS.gene06408	0.869956	2.10E-66	-1.69E-46
MS.gene049427	MS.gene06408	0.827137	1.85E-54	-1.69E-46
MS.gene049609	MS.gene06408	0.908088	2.50E-81	-1.69E-46
MS.gene049611	MS.gene06408	-0.823498	1.34E-53	-1.69E-46
MS.gene049615	MS.gene06408	0.822025	2.95E-53	-1.69E-46
MS.gene049627	MS.gene06408	0.888822	4.20E-73	-1.69E-46
MS.gene049633	MS.gene06408	0.90221	1.22E-78	-1.69E-46
MS.gene049805	MS.gene06408	0.887264	1.66E-72	-1.69E-46
MS.gene049865	MS.gene06408	0.824713	6.95E-54	-1.69E-46
MS.gene05010	MS.gene06408	0.929174	1.01E-92	-1.69E-46
MS.gene050163	MS.gene06408	0.956517	2.45E-114	-1.69E-46
MS.gene050165	MS.gene06408	0.951449	2.00E-109	-1.69E-46
MS.gene050170	MS.gene06408	0.882054	1.44E-70	-1.69E-46
MS.gene050216	MS.gene06408	0.854686	1.04E-61	-1.69E-46
MS.gene050323	MS.gene06408	0.908154	2.33E-81	-1.69E-46
MS.gene050333	MS.gene06408	0.9368	9.72E-98	-1.69E-46
MS.gene050353	MS.gene06408	-0.808377	3.19E-50	-1.69E-46
MS.gene050381	MS.gene06408	-0.834924	2.26E-56	-1.69E-46
MS.gene050444	MS.gene06408	0.878194	3.42E-69	-1.69E-46
MS.gene050496	MS.gene06408	0.895013	1.43E-75	-1.69E-46
MS.gene050504	MS.gene06408	0.96163	6.32E-120	-1.69E-46
MS.gene050518	MS.gene06408	0.951275	2.88E-109	-1.69E-46
MS.gene050520	MS.gene06408	0.809654	1.70E-50	-1.69E-46
MS.gene050538	MS.gene06408	0.850694	1.44E-60	-1.69E-46
MS.gene050577	MS.gene06408	0.92121	4.79E-88	-1.69E-46
MS.gene050593	MS.gene06408	0.863741	2.01E-64	-1.69E-46
MS.gene050612	MS.gene06408	0.958985	6.04E-117	-1.69E-46
MS.gene050647	MS.gene06408	-0.811666	6.25E-51	-1.69E-46
MS.gene050662	MS.gene06408	0.842297	2.82E-58	-1.69E-46
MS.gene050675	MS.gene06408	0.932744	5.37E-95	-1.69E-46
MS.gene050686	MS.gene06408	0.812636	3.84E-51	-1.69E-46
MS.gene050690	MS.gene06408	0.811243	7.72E-51	-1.69E-46
MS.gene050699	MS.gene06408	0.950542	1.33E-108	-1.69E-46
MS.gene050747	MS.gene06408	0.898931	3.27E-77	-1.69E-46
MS.gene050767	MS.gene06408	0.82232	2.52E-53	-1.69E-46
MS.gene050770	MS.gene06408	0.823388	1.42E-53	-1.69E-46
MS.gene050772	MS.gene06408	0.939181	1.96E-99	-1.69E-46
MS.gene050781	MS.gene06408	0.812227	4.71E-51	-1.69E-46
MS.gene05079	MS.gene06408	-0.80379	2.95E-49	-1.69E-46
MS.gene05080	MS.gene06408	0.896635	3.05E-76	-1.69E-46
MS.gene05081	MS.gene06408	0.822643	2.12E-53	-1.69E-46
MS.gene050832	MS.gene06408	-0.800483	1.41E-48	-1.69E-46
MS.gene050833	MS.gene06408	-0.807517	4.86E-50	-1.69E-46
MS.gene050868	MS.gene06408	0.904954	7.15E-80	-1.69E-46
MS.gene050871	MS.gene06408	0.903506	3.23E-79	-1.69E-46
MS.gene050876	MS.gene06408	0.892727	1.22E-74	-1.69E-46
MS.gene05087	MS.gene06408	0.832422	9.54E-56	-1.69E-46
MS.gene050883	MS.gene06408	-0.822939	1.81E-53	-1.69E-46
MS.gene050904	MS.gene06408	0.874714	5.44E-68	-1.69E-46
MS.gene050950	MS.gene06408	0.897446	1.40E-76	-1.69E-46
MS.gene050986	MS.gene06408	0.9543	4.04E-112	-1.69E-46
MS.gene05100	MS.gene06408	0.921762	2.36E-88	-1.69E-46
MS.gene05104	MS.gene06408	-0.828278	9.82E-55	-1.69E-46
MS.gene051127	MS.gene06408	-0.832329	1.01E-55	-1.69E-46
MS.gene051138	MS.gene06408	-0.820455	6.80E-53	-1.69E-46
MS.gene051167	MS.gene06408	-0.81726	3.62E-52	-1.69E-46
MS.gene051228	MS.gene06408	0.866505	2.71E-65	-1.69E-46
MS.gene051268	MS.gene06408	0.854397	1.26E-61	-1.69E-46
MS.gene051317	MS.gene06408	0.907558	4.45E-81	-1.69E-46
MS.gene051336	MS.gene06408	0.805868	1.08E-49	-1.69E-46
MS.gene051364	MS.gene06408	-0.831675	1.46E-55	-1.69E-46
MS.gene051366	MS.gene06408	-0.829385	5.30E-55	-1.69E-46
MS.gene051387	MS.gene06408	0.825562	4.38E-54	-1.69E-46
MS.gene051434	MS.gene06408	0.808197	3.49E-50	-1.69E-46
MS.gene051509	MS.gene06408	0.810085	1.37E-50	-1.69E-46
MS.gene051551	MS.gene06408	0.926797	2.86E-91	-1.69E-46
MS.gene051564	MS.gene06408	0.821309	4.32E-53	-1.69E-46
MS.gene051566	MS.gene06408	0.801036	1.09E-48	-1.69E-46
MS.gene051617	MS.gene06408	0.806148	9.47E-50	-1.69E-46
MS.gene051651	MS.gene06408	-0.824456	7.99E-54	-1.69E-46
MS.gene051666	MS.gene06408	0.86119	1.22E-63	-1.69E-46
MS.gene051694	MS.gene06408	0.873965	9.77E-68	-1.69E-46
MS.gene051734	MS.gene06408	0.812732	3.66E-51	-1.69E-46
MS.gene051810	MS.gene06408	0.932278	1.08E-94	-1.69E-46
MS.gene051838	MS.gene06408	0.835804	1.36E-56	-1.69E-46
MS.gene051858	MS.gene06408	0.880754	4.23E-70	-1.69E-46
MS.gene051874	MS.gene06408	0.835735	1.41E-56	-1.69E-46
MS.gene051941	MS.gene06408	0.800466	1.42E-48	-1.69E-46
MS.gene051946	MS.gene06408	-0.808822	2.56E-50	-1.69E-46
MS.gene051949	MS.gene06408	0.892136	2.10E-74	-1.69E-46
MS.gene052129	MS.gene06408	-0.821095	4.85E-53	-1.69E-46
MS.gene052164	MS.gene06408	0.897027	2.09E-76	-1.69E-46
MS.gene052271	MS.gene06408	0.904488	1.16E-79	-1.69E-46
MS.gene052379	MS.gene06408	0.882393	1.08E-70	-1.69E-46
MS.gene052421	MS.gene06408	0.82646	2.68E-54	-1.69E-46
MS.gene052482	MS.gene06408	0.902469	9.39E-79	-1.69E-46
MS.gene052484	MS.gene06408	0.800839	1.19E-48	-1.69E-46
MS.gene052486	MS.gene06408	0.907144	6.96E-81	-1.69E-46
MS.gene052501	MS.gene06408	0.81655	5.22E-52	-1.69E-46
MS.gene052503	MS.gene06408	0.889987	1.48E-73	-1.69E-46
MS.gene052504	MS.gene06408	0.835329	1.79E-56	-1.69E-46
MS.gene052505	MS.gene06408	0.801423	9.07E-49	-1.69E-46
MS.gene052506	MS.gene06408	0.875728	2.45E-68	-1.69E-46
MS.gene052605	MS.gene06408	0.828055	1.11E-54	-1.69E-46
MS.gene052615	MS.gene06408	0.910655	1.47E-82	-1.69E-46
MS.gene052670	MS.gene06408	0.836814	7.51E-57	-1.69E-46
MS.gene052820	MS.gene06408	0.802051	6.74E-49	-1.69E-46
MS.gene052822	MS.gene06408	0.888953	3.73E-73	-1.69E-46
MS.gene052823	MS.gene06408	0.883869	3.11E-71	-1.69E-46
MS.gene052825	MS.gene06408	0.877354	6.72E-69	-1.69E-46
MS.gene052870	MS.gene06408	0.871375	7.17E-67	-1.69E-46
MS.gene052872	MS.gene06408	0.886832	2.43E-72	-1.69E-46
MS.gene052916	MS.gene06408	0.892066	2.24E-74	-1.69E-46
MS.gene052966	MS.gene06408	0.897551	1.26E-76	-1.69E-46
MS.gene052987	MS.gene06408	0.800105	1.68E-48	-1.69E-46
MS.gene053009	MS.gene06408	0.844248	8.50E-59	-1.69E-46
MS.gene053018	MS.gene06408	0.803927	2.76E-49	-1.69E-46
MS.gene053104	MS.gene06408	0.841854	3.69E-58	-1.69E-46
MS.gene053107	MS.gene06408	0.800084	1.70E-48	-1.69E-46
MS.gene053117	MS.gene06408	0.824032	1.01E-53	-1.69E-46
MS.gene053203	MS.gene06408	0.916111	2.64E-85	-1.69E-46
MS.gene053207	MS.gene06408	0.887342	1.55E-72	-1.69E-46
MS.gene053213	MS.gene06408	0.948125	1.75E-106	-1.69E-46
MS.gene053284	MS.gene06408	0.830339	3.11E-55	-1.69E-46
MS.gene053285	MS.gene06408	0.819918	9.02E-53	-1.69E-46
MS.gene053286	MS.gene06408	0.950269	2.34E-108	-1.69E-46
MS.gene053322	MS.gene06408	0.864108	1.54E-64	-1.69E-46
MS.gene053420	MS.gene06408	-0.844533	7.13E-59	-1.69E-46
MS.gene053436	MS.gene06408	0.876492	1.34E-68	-1.69E-46
MS.gene053479	MS.gene06408	0.86641	2.91E-65	-1.69E-46
MS.gene053480	MS.gene06408	0.873819	1.09E-67	-1.69E-46
MS.gene053549	MS.gene06408	-0.814843	1.25E-51	-1.69E-46
MS.gene053561	MS.gene06408	-0.831665	1.47E-55	-1.69E-46
MS.gene053574	MS.gene06408	0.914943	1.06E-84	-1.69E-46
MS.gene053579	MS.gene06408	0.805127	1.55E-49	-1.69E-46
MS.gene053626	MS.gene06408	0.863843	1.86E-64	-1.69E-46
MS.gene053632	MS.gene06408	0.91214	2.74E-83	-1.69E-46
MS.gene053633	MS.gene06408	0.835594	1.53E-56	-1.69E-46
MS.gene053824	MS.gene06408	0.905326	4.83E-80	-1.69E-46
MS.gene053915	MS.gene06408	0.807607	4.65E-50	-1.69E-46
MS.gene053916	MS.gene06408	0.881915	1.61E-70	-1.69E-46
MS.gene054003	MS.gene06408	0.848189	7.18E-60	-1.69E-46
MS.gene054374	MS.gene06408	0.828336	9.51E-55	-1.69E-46
MS.gene054408	MS.gene06408	0.883024	6.37E-71	-1.69E-46
MS.gene054595	MS.gene06408	0.906117	2.09E-80	-1.69E-46
MS.gene054600	MS.gene06408	0.923777	1.70E-89	-1.69E-46
MS.gene054616	MS.gene06408	-0.821849	3.24E-53	-1.69E-46
MS.gene054642	MS.gene06408	0.967049	9.58E-127	-1.69E-46
MS.gene054706	MS.gene06408	-0.846887	1.64E-59	-1.69E-46
MS.gene054708	MS.gene06408	-0.809791	1.59E-50	-1.69E-46
MS.gene05470	MS.gene06408	0.912596	1.63E-83	-1.69E-46
MS.gene054927	MS.gene06408	0.844103	9.30E-59	-1.69E-46
MS.gene05494	MS.gene06408	0.808584	2.88E-50	-1.69E-46
MS.gene054954	MS.gene06408	0.987536	1.30E-170	-1.69E-46
MS.gene054959	MS.gene06408	-0.828619	8.13E-55	-1.69E-46
MS.gene05505	MS.gene06408	0.867324	1.49E-65	-1.69E-46
MS.gene055154	MS.gene06408	-0.855171	7.54E-62	-1.69E-46
MS.gene055206	MS.gene06408	0.875338	3.33E-68	-1.69E-46
MS.gene055212	MS.gene06408	0.86282	3.87E-64	-1.69E-46
MS.gene055224	MS.gene06408	0.862703	4.20E-64	-1.69E-46
MS.gene055289	MS.gene06408	0.840883	6.65E-58	-1.69E-46
MS.gene055362	MS.gene06408	0.963463	4.08E-122	-1.69E-46
MS.gene055397	MS.gene06408	0.847043	1.48E-59	-1.69E-46
MS.gene055499	MS.gene06408	0.850004	2.25E-60	-1.69E-46
MS.gene055502	MS.gene06408	0.952621	1.63E-110	-1.69E-46
MS.gene055577	MS.gene06408	0.923536	2.33E-89	-1.69E-46
MS.gene055629	MS.gene06408	0.801825	7.50E-49	-1.69E-46
MS.gene055634	MS.gene06408	0.854036	1.61E-61	-1.69E-46
MS.gene055636	MS.gene06408	0.860787	1.62E-63	-1.69E-46
MS.gene055638	MS.gene06408	0.874842	4.92E-68	-1.69E-46
MS.gene055647	MS.gene06408	0.876345	1.50E-68	-1.69E-46
MS.gene055722	MS.gene06408	0.901467	2.60E-78	-1.69E-46
MS.gene055748	MS.gene06408	0.916719	1.27E-85	-1.69E-46
MS.gene055750	MS.gene06408	0.90497	7.03E-80	-1.69E-46
MS.gene055751	MS.gene06408	0.920264	1.59E-87	-1.69E-46
MS.gene055776	MS.gene06408	0.899697	1.53E-77	-1.69E-46
MS.gene055849	MS.gene06408	0.850847	1.30E-60	-1.69E-46
MS.gene05589	MS.gene06408	0.899583	1.72E-77	-1.69E-46
MS.gene05592	MS.gene06408	0.868193	7.83E-66	-1.69E-46
MS.gene055941	MS.gene06408	0.903421	3.53E-79	-1.69E-46
MS.gene055942	MS.gene06408	-0.817239	3.66E-52	-1.69E-46
MS.gene055956	MS.gene06408	-0.84496	5.47E-59	-1.69E-46
MS.gene056040	MS.gene06408	0.820947	5.24E-53	-1.69E-46
MS.gene056046	MS.gene06408	0.858249	9.38E-63	-1.69E-46
MS.gene056083	MS.gene06408	0.890767	7.32E-74	-1.69E-46
MS.gene056166	MS.gene06408	0.816394	5.66E-52	-1.69E-46
MS.gene056311	MS.gene06408	-0.803012	4.27E-49	-1.69E-46
MS.gene056359	MS.gene06408	-0.810248	1.27E-50	-1.69E-46
MS.gene056374	MS.gene06408	0.920158	1.82E-87	-1.69E-46
MS.gene056387	MS.gene06408	0.817657	2.94E-52	-1.69E-46
MS.gene056409	MS.gene06408	0.851709	7.44E-61	-1.69E-46
MS.gene056446	MS.gene06408	0.832514	9.05E-56	-1.69E-46
MS.gene056448	MS.gene06408	0.810863	9.33E-51	-1.69E-46
MS.gene056449	MS.gene06408	0.851126	1.09E-60	-1.69E-46
MS.gene056450	MS.gene06408	0.835264	1.86E-56	-1.69E-46
MS.gene056487	MS.gene06408	0.827089	1.90E-54	-1.69E-46
MS.gene056504	MS.gene06408	0.939811	6.77E-100	-1.69E-46
MS.gene056510	MS.gene06408	0.951165	3.62E-109	-1.69E-46
MS.gene056549	MS.gene06408	0.863766	1.97E-64	-1.69E-46
MS.gene056550	MS.gene06408	-0.847161	1.38E-59	-1.69E-46
MS.gene056610	MS.gene06408	0.862342	5.42E-64	-1.69E-46
MS.gene056657	MS.gene06408	0.972313	1.46E-134	-1.69E-46
MS.gene056692	MS.gene06408	0.91945	4.44E-87	-1.69E-46
MS.gene056856	MS.gene06408	-0.815822	7.59E-52	-1.69E-46
MS.gene056878	MS.gene06408	0.82244	2.37E-53	-1.69E-46
MS.gene056897	MS.gene06408	0.812808	3.52E-51	-1.69E-46
MS.gene056898	MS.gene06408	0.885097	1.09E-71	-1.69E-46
MS.gene056946	MS.gene06408	0.836585	8.59E-57	-1.69E-46
MS.gene057011	MS.gene06408	0.827287	1.70E-54	-1.69E-46
MS.gene057014	MS.gene06408	-0.825909	3.63E-54	-1.69E-46
MS.gene057076	MS.gene06408	0.87814	3.57E-69	-1.69E-46
MS.gene057086	MS.gene06408	0.820644	6.15E-53	-1.69E-46
MS.gene057129	MS.gene06408	0.881089	3.21E-70	-1.69E-46
MS.gene057146	MS.gene06408	0.813138	2.98E-51	-1.69E-46
MS.gene057246	MS.gene06408	0.80282	4.68E-49	-1.69E-46
MS.gene057331	MS.gene06408	0.88266	8.65E-71	-1.69E-46
MS.gene057332	MS.gene06408	0.801935	7.12E-49	-1.69E-46
MS.gene057416	MS.gene06408	0.923115	4.06E-89	-1.69E-46
MS.gene05753	MS.gene06408	0.8142	1.74E-51	-1.69E-46
MS.gene057658	MS.gene06408	0.88253	9.65E-71	-1.69E-46
MS.gene057734	MS.gene06408	0.811532	6.68E-51	-1.69E-46
MS.gene057831	MS.gene06408	0.915151	8.27E-85	-1.69E-46
MS.gene057856	MS.gene06408	0.815294	9.95E-52	-1.69E-46
MS.gene057857	MS.gene06408	0.834326	3.20E-56	-1.69E-46
MS.gene05787	MS.gene06408	0.857421	1.65E-62	-1.69E-46
MS.gene057926	MS.gene06408	0.84747	1.13E-59	-1.69E-46
MS.gene057986	MS.gene06408	0.821319	4.30E-53	-1.69E-46
MS.gene058019	MS.gene06408	0.866529	2.67E-65	-1.69E-46
MS.gene058117	MS.gene06408	-0.816952	4.24E-52	-1.69E-46
MS.gene058130	MS.gene06408	0.852093	5.79E-61	-1.69E-46
MS.gene058157	MS.gene06408	0.827809	1.27E-54	-1.69E-46
MS.gene058175	MS.gene06408	-0.801538	8.59E-49	-1.69E-46
MS.gene058268	MS.gene06408	-0.816696	4.84E-52	-1.69E-46
MS.gene058269	MS.gene06408	-0.815855	7.46E-52	-1.69E-46
MS.gene058323	MS.gene06408	0.851874	6.68E-61	-1.69E-46
MS.gene058334	MS.gene06408	-0.858107	1.03E-62	-1.69E-46
MS.gene058335	MS.gene06408	0.845437	4.06E-59	-1.69E-46
MS.gene058338	MS.gene06408	0.873083	1.94E-67	-1.69E-46
MS.gene05837	MS.gene06408	0.895826	6.62E-76	-1.69E-46
MS.gene058419	MS.gene06408	0.967893	6.58E-128	-1.69E-46
MS.gene058544	MS.gene06408	0.928763	1.82E-92	-1.69E-46
MS.gene058719	MS.gene06408	0.857415	1.66E-62	-1.69E-46
MS.gene058723	MS.gene06408	0.890881	6.59E-74	-1.69E-46
MS.gene058773	MS.gene06408	0.942482	6.64E-102	-1.69E-46
MS.gene058838	MS.gene06408	0.892655	1.30E-74	-1.69E-46
MS.gene05883	MS.gene06408	0.858726	6.76E-63	-1.69E-46
MS.gene058978	MS.gene06408	-0.819997	8.65E-53	-1.69E-46
MS.gene059022	MS.gene06408	0.966078	1.92E-125	-1.69E-46
MS.gene059023	MS.gene06408	0.935625	6.32E-97	-1.69E-46
MS.gene059029	MS.gene06408	0.890671	7.98E-74	-1.69E-46
MS.gene059079	MS.gene06408	0.840716	7.35E-58	-1.69E-46
MS.gene05912	MS.gene06408	0.848766	4.97E-60	-1.69E-46
MS.gene05913	MS.gene06408	0.879586	1.10E-69	-1.69E-46
MS.gene05914	MS.gene06408	0.846093	2.70E-59	-1.69E-46
MS.gene059181	MS.gene06408	0.818111	2.32E-52	-1.69E-46
MS.gene059305	MS.gene06408	0.826471	2.66E-54	-1.69E-46
MS.gene05934	MS.gene06408	0.876893	9.72E-69	-1.69E-46
MS.gene059367	MS.gene06408	0.853538	2.24E-61	-1.69E-46
MS.gene059479	MS.gene06408	-0.811688	6.18E-51	-1.69E-46
MS.gene059526	MS.gene06408	-0.815673	8.20E-52	-1.69E-46
MS.gene059536	MS.gene06408	0.846498	2.09E-59	-1.69E-46
MS.gene059667	MS.gene06408	0.836304	1.01E-56	-1.69E-46
MS.gene059677	MS.gene06408	0.975015	3.48E-139	-1.69E-46
MS.gene059699	MS.gene06408	-0.814075	1.85E-51	-1.69E-46
MS.gene059703	MS.gene06408	-0.821614	3.68E-53	-1.69E-46
MS.gene059718	MS.gene06408	0.953045	6.49E-111	-1.69E-46
MS.gene059756	MS.gene06408	0.915437	5.89E-85	-1.69E-46
MS.gene059801	MS.gene06408	0.882776	7.84E-71	-1.69E-46
MS.gene059837	MS.gene06408	0.856809	2.50E-62	-1.69E-46
MS.gene059858	MS.gene06408	0.80154	8.58E-49	-1.69E-46
MS.gene059865	MS.gene06408	0.93894	2.93E-99	-1.69E-46
MS.gene059902	MS.gene06408	0.876168	1.73E-68	-1.69E-46
MS.gene059960	MS.gene06408	0.859669	3.52E-63	-1.69E-46
MS.gene06000	MS.gene06408	0.873396	1.52E-67	-1.69E-46
MS.gene060193	MS.gene06408	0.829733	4.36E-55	-1.69E-46
MS.gene060337	MS.gene06408	-0.84197	3.44E-58	-1.69E-46
MS.gene060341	MS.gene06408	0.837685	4.49E-57	-1.69E-46
MS.gene060482	MS.gene06408	0.874318	7.42E-68	-1.69E-46
MS.gene060526	MS.gene06408	0.818639	1.77E-52	-1.69E-46
MS.gene060595	MS.gene06408	-0.828407	9.15E-55	-1.69E-46
MS.gene060602	MS.gene06408	-0.810491	1.12E-50	-1.69E-46
MS.gene060703	MS.gene06408	0.929788	4.20E-93	-1.69E-46
MS.gene060727	MS.gene06408	0.810312	1.23E-50	-1.69E-46
MS.gene060728	MS.gene06408	0.852691	3.91E-61	-1.69E-46
MS.gene060762	MS.gene06408	0.93556	7.00E-97	-1.69E-46
MS.gene060778	MS.gene06408	0.888838	4.14E-73	-1.69E-46
MS.gene06077	MS.gene06408	0.945769	1.64E-104	-1.69E-46
MS.gene060804	MS.gene06408	0.848748	5.03E-60	-1.69E-46
MS.gene060818	MS.gene06408	0.826489	2.64E-54	-1.69E-46
MS.gene060823	MS.gene06408	-0.819958	8.84E-53	-1.69E-46
MS.gene060835	MS.gene06408	0.851865	6.72E-61	-1.69E-46
MS.gene060837	MS.gene06408	0.804139	2.49E-49	-1.69E-46
MS.gene06092	MS.gene06408	0.90112	3.69E-78	-1.69E-46
MS.gene06097	MS.gene06408	0.810722	1.00E-50	-1.69E-46
MS.gene060982	MS.gene06408	0.924334	8.09E-90	-1.69E-46
MS.gene061041	MS.gene06408	0.823349	1.45E-53	-1.69E-46
MS.gene061044	MS.gene06408	-0.805549	1.27E-49	-1.69E-46
MS.gene061134	MS.gene06408	0.866935	1.98E-65	-1.69E-46
MS.gene061150	MS.gene06408	0.944375	2.19E-103	-1.69E-46
MS.gene061171	MS.gene06408	0.861022	1.37E-63	-1.69E-46
MS.gene061200	MS.gene06408	0.879336	1.35E-69	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06408.t1	MTR_3g096290	89.091	165	12	1	1	165	1	159	5.27e-100	285
MS.gene06408.t1	MTR_3g096290	85.366	123	12	1	1	123	9	125	2.74e-65	196

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene06408.t1	AT1G74880	58.788	165	61	1	1	165	1	158	1.60e-62	190

Find 45 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTTCTTAGGAAGAGTCTT+AGG	0.205905	3.2:+80399601	None:intergenic
GTAGTCTAATCCTTTGTAAT+AGG	0.224129	3.2:+80399297	None:intergenic
CTGGAATAAACAGGTTTCTT+AGG	0.242562	3.2:+80399589	None:intergenic
CTTGACTCACTGGAATAAAC+AGG	0.396415	3.2:+80399580	None:intergenic
GATATGCGTATATTTGAAAC+AGG	0.408664	3.2:-80399157	MS.gene06408:CDS
TCTTGAACTGCACGAATCAA+TGG	0.413571	3.2:+80399715	None:intergenic
GTTTCTTAGGAAGAGTCTTA+GGG	0.440236	3.2:+80399602	None:intergenic
TGCTTAATTCTCAGGTTGCA+TGG	0.442545	3.2:-80398944	MS.gene06408:intron
GCAGTTCAAGACGGTGAACC+AGG	0.447486	3.2:-80399703	MS.gene06408:CDS
TAGTCTAATCCTTTGTAATA+GGG	0.459657	3.2:+80399298	None:intergenic
GCATCAGAGCTCTTAGTTTG+TGG	0.477417	3.2:+80399667	None:intergenic
TTTGAGAAATGGGAAAGAGA+AGG	0.496635	3.2:+80399772	None:intergenic
CTTGAACTGCACGAATCAAT+GGG	0.503362	3.2:+80399716	None:intergenic
GGAAGCCAAGCTGGAGCAGT+GGG	0.508111	3.2:+80398912	None:intergenic
AGGAAGAGTCTTAGGGGCAG+TGG	0.518025	3.2:+80399609	None:intergenic
ATGGGAAAGAGAAGGAAAGG+AGG	0.524817	3.2:+80399780	None:intergenic
GAAATGGGAAAGAGAAGGAA+AGG	0.530112	3.2:+80399777	None:intergenic
GCTTAATTCTCAGGTTGCAT+GGG	0.543172	3.2:-80398943	MS.gene06408:intron
TCCTACATACATGCTTATCA+AGG	0.544432	3.2:-80398892	MS.gene06408:intron
AGGAAGCCAAGCTGGAGCAG+TGG	0.544685	3.2:+80398911	None:intergenic
GAGTCCCCACTGCTCCAGCT+TGG	0.545534	3.2:-80398917	MS.gene06408:CDS
AATTTGTGGACAGTGAAGAA+AGG	0.549691	3.2:-80399480	MS.gene06408:intron
AATTCTCAGGTTGCATGGGT+AGG	0.550094	3.2:-80398939	MS.gene06408:intron
TCTAATCCTTTGTAATAGGG+TGG	0.556199	3.2:+80399301	None:intergenic
TGAAGAAAGGTCAGATTGTG+AGG	0.558487	3.2:-80399467	MS.gene06408:CDS
ATGTATGTAGGAAGCCAAGC+TGG	0.563654	3.2:+80398903	None:intergenic
GGGCACCCACCCTATTACAA+AGG	0.572065	3.2:-80399307	MS.gene06408:CDS
TCAGATTGTGAGGGTGGACA+AGG	0.576125	3.2:-80399457	MS.gene06408:CDS
GAAAGGTCAGATTGTGAGGG+TGG	0.585375	3.2:-80399463	MS.gene06408:CDS
CTAATCCTTTGTAATAGGGT+GGG	0.595783	3.2:+80399302	None:intergenic
CAGTTCAAGACGGTGAACCA+GGG	0.597426	3.2:-80399702	MS.gene06408:CDS
AGCACTACTAGAGGAGGCTG+AGG	0.602396	3.2:+80399642	None:intergenic
TTGATTCGTGCAGTTCAAGA+CGG	0.616062	3.2:-80399712	MS.gene06408:CDS
TTTGTTTGTTTACCTCACCA+CGG	0.617430	3.2:+80399263	None:intergenic
AGTTCAAGACGGTGAACCAG+GGG	0.628235	3.2:-80399701	MS.gene06408:CDS
ACCTTGATAAGCATGTATGT+AGG	0.632174	3.2:+80398891	None:intergenic
GAATCAATGGGAAAGAAGAA+CGG	0.633893	3.2:+80399728	None:intergenic
TTTCTTAGGAAGAGTCTTAG+GGG	0.641863	3.2:+80399603	None:intergenic
GAAGAAAGGTCAGATTGTGA+GGG	0.659835	3.2:-80399466	MS.gene06408:CDS
AGACTGAGCACTACTAGAGG+AGG	0.683341	3.2:+80399636	None:intergenic
GACTACATTTACGAAGACCG+TGG	0.695548	3.2:-80399280	MS.gene06408:CDS
TGAAGACTGAGCACTACTAG+AGG	0.698555	3.2:+80399633	None:intergenic
CATTTACGAAGACCGTGGTG+AGG	0.713150	3.2:-80399275	MS.gene06408:intron
GTTCAAGACGGTGAACCAGG+GGG	0.724086	3.2:-80399700	MS.gene06408:CDS
GAAGCCAAGCTGGAGCAGTG+GGG	0.758823	3.2:+80398913	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTTTGTGTAAAAAAATTAT+TGG	+	chr3.2:80399472-80399491	None:intergenic	15.0%
!!!	ATTTTGTTTTCATAATCTTT+TGG	+	chr3.2:80399294-80399313	None:intergenic	15.0%
!!!	TATTCATTTTTGTTAATTTG+TGG	-	chr3.2:80399035-80399054	MS.gene06408:intron	15.0%
!	AAATGTCAAACTGTATTTGT+AGG	-	chr3.2:80399344-80399363	MS.gene06408:intron	25.0%
!	AGATACTGAAAAATTAACCT+TGG	+	chr3.2:80399195-80399214	None:intergenic	25.0%
!	ATTTCTCAAAAACTTTGACA+AGG	-	chr3.2:80398770-80398789	MS.gene06408:intron	25.0%
!	TAGTCTAATCCTTTGTAATA+GGG	+	chr3.2:80399234-80399253	None:intergenic	25.0%
!!	GTTTTCTATGATTCCAATTA+TGG	-	chr3.2:80399504-80399523	MS.gene06408:intron	25.0%
!!!	ATTTTTCAGTATCTTTCTGT+TGG	-	chr3.2:80399201-80399220	MS.gene06408:intron	25.0%
!!!	TGTCAAAGTTTTTGAGAAAT+GGG	+	chr3.2:80398770-80398789	None:intergenic	25.0%
!!!	TTGTCAAAGTTTTTGAGAAA+TGG	+	chr3.2:80398771-80398790	None:intergenic	25.0%
!!!	TTTTTCAGTATCTTTCTGTT+GGG	-	chr3.2:80399202-80399221	MS.gene06408:intron	25.0%
	CAACAAAAAAAGTAAGAGTG+AGG	+	chr3.2:80399781-80399800	None:intergenic	30.0%
	CTTCACAATGTTACCATAAT+TGG	+	chr3.2:80399520-80399539	None:intergenic	30.0%
	GTAGTCTAATCCTTTGTAAT+AGG	+	chr3.2:80399235-80399254	None:intergenic	30.0%
	TAATGCTTTACTTGTTCCAA+TGG	-	chr3.2:80399660-80399679	MS.gene06408:CDS	30.0%
!	GATATGCGTATATTTGAAAC+AGG	-	chr3.2:80399372-80399391	MS.gene06408:intron	30.0%
	AATTTGTGGACAGTGAAGAA+AGG	-	chr3.2:80399049-80399068	MS.gene06408:intron	35.0%
	ACCTTGATAAGCATGTATGT+AGG	+	chr3.2:80399641-80399660	None:intergenic	35.0%
	CAAACTGTATTTGTAGGTCT+TGG	-	chr3.2:80399350-80399369	MS.gene06408:intron	35.0%
	CTAATCCTTTGTAATAGGGT+GGG	+	chr3.2:80399230-80399249	None:intergenic	35.0%
	CTGGAATAAACAGGTTTCTT+AGG	+	chr3.2:80398943-80398962	None:intergenic	35.0%
	GAATCAATGGGAAAGAAGAA+CGG	+	chr3.2:80398804-80398823	None:intergenic	35.0%
	GTTTCTTAGGAAGAGTCTTA+GGG	+	chr3.2:80398930-80398949	None:intergenic	35.0%
	TATTAGATTGTAGCAGCCAT+TGG	+	chr3.2:80399679-80399698	None:intergenic	35.0%
	TCCTACATACATGCTTATCA+AGG	-	chr3.2:80399637-80399656	MS.gene06408:CDS	35.0%
	TCTAATCCTTTGTAATAGGG+TGG	+	chr3.2:80399231-80399250	None:intergenic	35.0%
	TGTACCATTGCTTAATTCTC+AGG	-	chr3.2:80399577-80399596	MS.gene06408:intron	35.0%
	TTTCTTAGGAAGAGTCTTAG+GGG	+	chr3.2:80398929-80398948	None:intergenic	35.0%
	TTTGAGAAATGGGAAAGAGA+AGG	+	chr3.2:80398760-80398779	None:intergenic	35.0%
	TTTGTTTGTTTACCTCACCA+CGG	+	chr3.2:80399269-80399288	None:intergenic	35.0%
	CTTGAACTGCACGAATCAAT+GGG	+	chr3.2:80398816-80398835	None:intergenic	40.0%
	CTTGACTCACTGGAATAAAC+AGG	+	chr3.2:80398952-80398971	None:intergenic	40.0%
	GAAATGGGAAAGAGAAGGAA+AGG	+	chr3.2:80398755-80398774	None:intergenic	40.0%
	GAAGAAAGGTCAGATTGTGA+GGG	-	chr3.2:80399063-80399082	MS.gene06408:intron	40.0%
	GCAACCTGAGAATTAAGCAA+TGG	+	chr3.2:80399584-80399603	None:intergenic	40.0%
	GGACTCAAATAACATGTCCA+AGG	-	chr3.2:80399175-80399194	MS.gene06408:intron	40.0%
	GGTTTCTTAGGAAGAGTCTT+AGG	+	chr3.2:80398931-80398950	None:intergenic	40.0%
	TAGTTATGTCAGCTGTGAGT+AGG	-	chr3.2:80399151-80399170	MS.gene06408:CDS	40.0%
	TATTTGGTTGCTTGACTCAC+TGG	+	chr3.2:80398962-80398981	None:intergenic	40.0%
	TCTTGAACTGCACGAATCAA+TGG	+	chr3.2:80398817-80398836	None:intergenic	40.0%
	TGAAGAAAGGTCAGATTGTG+AGG	-	chr3.2:80399062-80399081	MS.gene06408:intron	40.0%
!	GCTTAATTCTCAGGTTGCAT+GGG	-	chr3.2:80399586-80399605	MS.gene06408:intron	40.0%
!	TGCTTAATTCTCAGGTTGCA+TGG	-	chr3.2:80399585-80399604	MS.gene06408:intron	40.0%
!	TTGATTCGTGCAGTTCAAGA+CGG	-	chr3.2:80398817-80398836	MS.gene06408:intron	40.0%
	ATGGGAAAGAGAAGGAAAGG+AGG	+	chr3.2:80398752-80398771	None:intergenic	45.0%
	ATGTATGTAGGAAGCCAAGC+TGG	+	chr3.2:80399629-80399648	None:intergenic	45.0%
	GACTACATTTACGAAGACCG+TGG	-	chr3.2:80399249-80399268	MS.gene06408:intron	45.0%
	TGAAGACTGAGCACTACTAG+AGG	+	chr3.2:80398899-80398918	None:intergenic	45.0%
	TTATGTCAGCTGTGAGTAGG+AGG	-	chr3.2:80399154-80399173	MS.gene06408:CDS	45.0%
!	AATTCTCAGGTTGCATGGGT+AGG	-	chr3.2:80399590-80399609	MS.gene06408:CDS	45.0%
!	GCATCAGAGCTCTTAGTTTG+TGG	+	chr3.2:80398865-80398884	None:intergenic	45.0%
!!	AATTCAAATAAATATTTATT+TGG	+	chr3.2:80398978-80398997	None:intergenic	5.0%
	AGACTGAGCACTACTAGAGG+AGG	+	chr3.2:80398896-80398915	None:intergenic	50.0%
	AGTTCAAGACGGTGAACCAG+GGG	-	chr3.2:80398828-80398847	MS.gene06408:intron	50.0%
	CAGTTCAAGACGGTGAACCA+GGG	-	chr3.2:80398827-80398846	MS.gene06408:intron	50.0%
	CATTTACGAAGACCGTGGTG+AGG	-	chr3.2:80399254-80399273	MS.gene06408:intron	50.0%
	GAAAGGTCAGATTGTGAGGG+TGG	-	chr3.2:80399066-80399085	MS.gene06408:intron	50.0%
	GTCAGTAGTGTGTGTGCTGT+AGG	-	chr3.2:80399419-80399438	MS.gene06408:intron	50.0%
	GTGCTGTAGGTGTGAACCAA+AGG	-	chr3.2:80399432-80399451	MS.gene06408:intron	50.0%
	TCAGATTGTGAGGGTGGACA+AGG	-	chr3.2:80399072-80399091	MS.gene06408:intron	50.0%
	AGCACTACTAGAGGAGGCTG+AGG	+	chr3.2:80398890-80398909	None:intergenic	55.0%
	AGGAAGAGTCTTAGGGGCAG+TGG	+	chr3.2:80398923-80398942	None:intergenic	55.0%
	GCAGTTCAAGACGGTGAACC+AGG	-	chr3.2:80398826-80398845	MS.gene06408:intron	55.0%
	GGGCACCCACCCTATTACAA+AGG	-	chr3.2:80399222-80399241	MS.gene06408:intron	55.0%
	GTTCAAGACGGTGAACCAGG+GGG	-	chr3.2:80398829-80398848	MS.gene06408:intron	55.0%
	AGGAAGCCAAGCTGGAGCAG+TGG	+	chr3.2:80399621-80399640	None:intergenic	60.0%
	GAAGCCAAGCTGGAGCAGTG+GGG	+	chr3.2:80399619-80399638	None:intergenic	60.0%
	GGAAGCCAAGCTGGAGCAGT+GGG	+	chr3.2:80399620-80399639	None:intergenic	60.0%
	GGCATGCTGTCAGCTGCCTT+TGG	+	chr3.2:80399451-80399470	None:intergenic	60.0%
	GAGTCCCCACTGCTCCAGCT+TGG	-	chr3.2:80399612-80399631	MS.gene06408:CDS	65.0%
	TGTGGCTGTGTACTGCCCCC+TGG	+	chr3.2:80398847-80398866	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	80398718	80399833	80398718	ID=MS.gene06408
chr3.2	mRNA	80398718	80399833	80398718	ID=MS.gene06408.t1;Parent=MS.gene06408
chr3.2	exon	80399590	80399833	80399590	ID=MS.gene06408.t1.exon1;Parent=MS.gene06408.t1
chr3.2	CDS	80399590	80399833	80399590	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1
chr3.2	exon	80399434	80399489	80399434	ID=MS.gene06408.t1.exon2;Parent=MS.gene06408.t1
chr3.2	CDS	80399434	80399489	80399434	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1
chr3.2	exon	80399276	80399341	80399276	ID=MS.gene06408.t1.exon3;Parent=MS.gene06408.t1
chr3.2	CDS	80399276	80399341	80399276	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1
chr3.2	exon	80399144	80399185	80399144	ID=MS.gene06408.t1.exon4;Parent=MS.gene06408.t1
chr3.2	CDS	80399144	80399185	80399144	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1
chr3.2	exon	80398893	80398952	80398893	ID=MS.gene06408.t1.exon5;Parent=MS.gene06408.t1
chr3.2	CDS	80398893	80398952	80398893	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1
chr3.2	exon	80398718	80398747	80398718	ID=MS.gene06408.t1.exon6;Parent=MS.gene06408.t1
chr3.2	CDS	80398718	80398747	80398718	ID=cds.MS.gene06408.t1;Parent=MS.gene06408.t1

Gene Sequence

>MS.gene06408

ATGGCTTTCTGTGTAACTCTCTGCTACTACACCTCCTTTCCTTCTCTTTCCCATTTCTCAAAAACTTTGACAAGGAAACATGTCCGTTCTTCTTTCCCATTGATTCGTGCAGTTCAAGACGGTGAACCAGGGGGCAGTACACAGCCACAAACTAAGAGCTCTGATGCTTCCTCAGCCTCCTCTAGTAGTGCTCAGTCTTCAACCACTGCCCCTAAGACTCTTCCTAAGAAACCTGTTTATTCCAGTGAGTCAAGCAACCAAATAAATATTTATTTGAATTTTATATATATACTGAATGCTGCTGCTGTCTGTGTGAGTATTCATTTTTGTTAATTTGTGGACAGTGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATGTAAGAAGACTATTATTGATTTAGTTTCAATTATAGTTATGTCAGCTGTGAGTAGGAGGACTCAAATAACATGTCCAAGGTTAATTTTTCAGTATCTTTCTGTTGGGCACCCACCCTATTACAAAGGATTAGACTACATTTACGAAGACCGTGGTGAGGTAAACAAACAAACACCAAAAGATTATGAAAACAAAATACTTTATATGATTAGTGTTTATCTAACTAGAAATGTCAAACTGTATTTGTAGGTCTTGGATATGCGTATATTTGAAACAGGAGAGCATGCACTTGTAAGTAACTTGTCAGTAGTGTGTGTGCTGTAGGTGTGAACCAAAGGCAGCTGACAGCATGCCAATAATTTTTTTACACAAACAACATGACTATTTGTTTTCTATGATTCCAATTATGGTAACATTGTGAAGTATGTGAAGTTTAAGTTTTATTATTGTGACACAAAACTGTACCATTGCTTAATTCTCAGGTTGCATGGGTAGGAGTCCCCACTGCTCCAGCTTGGCTTCCTACATACATGCTTATCAAGGTAATGCTTTACTTGTTCCAATGGCTGCTACAATCTAATAGTAAATGAAATCTGATGTAAATTGTTTATTTTTATCTACATTTACATGACTTCTTTACATTTTAGTTGCTTTGAAAGCACCTCACTCTTACTTTTTTTGTTGCAGTCAGAGAAGCTCAATTATGAGAGACTATAA

Protein sequence

>MS.gene06408.t1

MAFCVTLCYYTSFPSLSHFSKTLTRKHVRSSFPLIRAVQDGEPGGSTQPQTKSSDASSASSSSAQSSTTAPKTLPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEHALVAWVGVPTAPAWLPTYMLIKSEKLNYERL