Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25011.t1 | XP_013444509.1 | 95 | 279 | 3 | 1 | 1 | 279 | 1 | 268 | 1.60E-153 | 552 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25011.t1 | P10708 | 82.2 | 281 | 37 | 3 | 1 | 279 | 1 | 270 | 3.8e-135 | 482.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25011.t1 | G7ZZ39 | 95.0 | 279 | 3 | 1 | 1 | 279 | 1 | 268 | 1.2e-153 | 552.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene25011 | 0.886593 | 2.99E-72 | -1.69E-46 |
| MS.gene049173 | MS.gene25011 | 0.854358 | 1.30E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene25011 | 0.870364 | 1.54E-66 | -1.69E-46 |
| MS.gene049222 | MS.gene25011 | 0.875889 | 2.16E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene25011 | 0.867709 | 1.12E-65 | -1.69E-46 |
| MS.gene049281 | MS.gene25011 | -0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene25011 | 0.935286 | 1.08E-96 | -1.69E-46 |
| MS.gene049320 | MS.gene25011 | 0.93565 | 6.07E-97 | -1.69E-46 |
| MS.gene04938 | MS.gene25011 | 0.822234 | 2.64E-53 | -1.69E-46 |
| MS.gene04939 | MS.gene25011 | 0.873737 | 1.17E-67 | -1.69E-46 |
| MS.gene049483 | MS.gene25011 | -0.810578 | 1.08E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene25011 | 0.828699 | 7.78E-55 | -1.69E-46 |
| MS.gene049611 | MS.gene25011 | -0.818314 | 2.09E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene25011 | 0.833291 | 5.80E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene25011 | 0.857843 | 1.24E-62 | -1.69E-46 |
| MS.gene049634 | MS.gene25011 | -0.814029 | 1.90E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene25011 | 0.803728 | 3.03E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene25011 | 0.896943 | 2.27E-76 | -1.69E-46 |
| MS.gene050163 | MS.gene25011 | 0.921678 | 2.63E-88 | -1.69E-46 |
| MS.gene050165 | MS.gene25011 | 0.923621 | 2.08E-89 | -1.69E-46 |
| MS.gene050170 | MS.gene25011 | 0.839543 | 1.49E-57 | -1.69E-46 |
| MS.gene050173 | MS.gene25011 | -0.843116 | 1.71E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene25011 | 0.830163 | 3.43E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene25011 | 0.872008 | 4.42E-67 | -1.69E-46 |
| MS.gene050333 | MS.gene25011 | 0.897711 | 1.08E-76 | -1.69E-46 |
| MS.gene050381 | MS.gene25011 | -0.817124 | 3.88E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene25011 | 0.866392 | 2.95E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene25011 | 0.886611 | 2.94E-72 | -1.69E-46 |
| MS.gene050504 | MS.gene25011 | 0.940504 | 2.09E-100 | -1.69E-46 |
| MS.gene050518 | MS.gene25011 | 0.905997 | 2.37E-80 | -1.69E-46 |
| MS.gene050577 | MS.gene25011 | 0.869538 | 2.87E-66 | -1.69E-46 |
| MS.gene050612 | MS.gene25011 | 0.942209 | 1.08E-101 | -1.69E-46 |
| MS.gene050675 | MS.gene25011 | 0.918334 | 1.77E-86 | -1.69E-46 |
| MS.gene050699 | MS.gene25011 | 0.91816 | 2.19E-86 | -1.69E-46 |
| MS.gene050747 | MS.gene25011 | 0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene25011 | 0.869123 | 3.92E-66 | -1.69E-46 |
| MS.gene05079 | MS.gene25011 | -0.838126 | 3.46E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene25011 | 0.841863 | 3.67E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene25011 | 0.873392 | 1.52E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene25011 | 0.873241 | 1.71E-67 | -1.69E-46 |
| MS.gene050876 | MS.gene25011 | 0.885625 | 6.92E-72 | -1.69E-46 |
| MS.gene050883 | MS.gene25011 | -0.810595 | 1.07E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene25011 | 0.834811 | 2.42E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene25011 | 0.808233 | 3.43E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene25011 | 0.953626 | 1.81E-111 | -1.69E-46 |
| MS.gene05100 | MS.gene25011 | 0.872654 | 2.69E-67 | -1.69E-46 |
| MS.gene051044 | MS.gene25011 | -0.808989 | 2.36E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene25011 | -0.842422 | 2.61E-58 | -1.69E-46 |
| MS.gene051138 | MS.gene25011 | -0.829876 | 4.03E-55 | -1.69E-46 |
| MS.gene051228 | MS.gene25011 | 0.840348 | 9.18E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene25011 | 0.843967 | 1.01E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene25011 | 0.87962 | 1.07E-69 | -1.69E-46 |
| MS.gene051364 | MS.gene25011 | -0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene25011 | -0.811985 | 5.32E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene25011 | 0.894032 | 3.61E-75 | -1.69E-46 |
| MS.gene051564 | MS.gene25011 | 0.814672 | 1.37E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene25011 | -0.819807 | 9.57E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene25011 | 0.928014 | 5.25E-92 | -1.69E-46 |
| MS.gene051858 | MS.gene25011 | 0.820786 | 5.71E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene25011 | 0.871354 | 7.29E-67 | -1.69E-46 |
| MS.gene052129 | MS.gene25011 | -0.812931 | 3.31E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene25011 | 0.850563 | 1.57E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene25011 | 0.866322 | 3.10E-65 | -1.69E-46 |
| MS.gene052379 | MS.gene25011 | 0.835719 | 1.42E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene25011 | 0.842634 | 2.29E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene25011 | 0.850928 | 1.24E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene25011 | 0.83459 | 2.75E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene25011 | 0.860644 | 1.79E-63 | -1.69E-46 |
| MS.gene052822 | MS.gene25011 | 0.805409 | 1.35E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene25011 | 0.83132 | 1.78E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene25011 | 0.823434 | 1.39E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene25011 | 0.824008 | 1.02E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene25011 | 0.841975 | 3.43E-58 | -1.69E-46 |
| MS.gene052916 | MS.gene25011 | 0.835802 | 1.36E-56 | -1.69E-46 |
| MS.gene052937 | MS.gene25011 | -0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene25011 | 0.862839 | 3.81E-64 | -1.69E-46 |
| MS.gene053203 | MS.gene25011 | 0.844588 | 6.89E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene25011 | 0.83034 | 3.10E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene25011 | 0.883281 | 5.12E-71 | -1.69E-46 |
| MS.gene053284 | MS.gene25011 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene25011 | 0.890718 | 7.65E-74 | -1.69E-46 |
| MS.gene053420 | MS.gene25011 | -0.841431 | 4.77E-58 | -1.69E-46 |
| MS.gene053436 | MS.gene25011 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene25011 | 0.83064 | 2.62E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene25011 | 0.84795 | 8.36E-60 | -1.69E-46 |
| MS.gene053488 | MS.gene25011 | -0.81357 | 2.39E-51 | -1.69E-46 |
| MS.gene053549 | MS.gene25011 | -0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene25011 | -0.844581 | 6.92E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene25011 | 0.835265 | 1.86E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene25011 | 0.874916 | 4.65E-68 | -1.69E-46 |
| MS.gene053824 | MS.gene25011 | 0.84849 | 5.93E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene25011 | 0.831416 | 1.69E-55 | -1.69E-46 |
| MS.gene054056 | MS.gene25011 | -0.807325 | 5.34E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene25011 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene25011 | 0.863253 | 2.84E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene25011 | 0.884081 | 2.60E-71 | -1.69E-46 |
| MS.gene054616 | MS.gene25011 | -0.829714 | 4.41E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene25011 | 0.905227 | 5.37E-80 | -1.69E-46 |
| MS.gene05470 | MS.gene25011 | 0.875877 | 2.18E-68 | -1.69E-46 |
| MS.gene054954 | MS.gene25011 | 0.942265 | 9.75E-102 | -1.69E-46 |
| MS.gene054959 | MS.gene25011 | -0.822982 | 1.77E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene25011 | -0.842022 | 3.33E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene25011 | 0.813264 | 2.80E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene25011 | 0.824058 | 9.91E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene25011 | 0.927255 | 1.52E-91 | -1.69E-46 |
| MS.gene055499 | MS.gene25011 | 0.80329 | 3.74E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene25011 | 0.911786 | 4.10E-83 | -1.69E-46 |
| MS.gene055577 | MS.gene25011 | 0.876074 | 1.86E-68 | -1.69E-46 |
| MS.gene055634 | MS.gene25011 | 0.831399 | 1.71E-55 | -1.69E-46 |
| MS.gene055636 | MS.gene25011 | 0.828287 | 9.78E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene25011 | 0.846116 | 2.66E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene25011 | 0.807376 | 5.21E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene25011 | 0.840318 | 9.34E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene25011 | 0.882017 | 1.48E-70 | -1.69E-46 |
| MS.gene055750 | MS.gene25011 | 0.874787 | 5.14E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene25011 | 0.898823 | 3.64E-77 | -1.69E-46 |
| MS.gene055776 | MS.gene25011 | 0.917675 | 3.97E-86 | -1.69E-46 |
| MS.gene055849 | MS.gene25011 | 0.801641 | 8.18E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene25011 | 0.886082 | 4.66E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene25011 | 0.860597 | 1.85E-63 | -1.69E-46 |
| MS.gene055942 | MS.gene25011 | -0.839449 | 1.57E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene25011 | -0.81763 | 2.98E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene25011 | 0.807913 | 4.01E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene25011 | 0.814983 | 1.17E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene25011 | 0.868659 | 5.54E-66 | -1.69E-46 |
| MS.gene056387 | MS.gene25011 | 0.808694 | 2.73E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene25011 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene25011 | 0.830099 | 3.55E-55 | -1.69E-46 |
| MS.gene056487 | MS.gene25011 | 0.80165 | 8.15E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene25011 | 0.922645 | 7.51E-89 | -1.69E-46 |
| MS.gene056510 | MS.gene25011 | 0.919147 | 6.47E-87 | -1.69E-46 |
| MS.gene056549 | MS.gene25011 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene25011 | -0.816431 | 5.55E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene25011 | 0.935307 | 1.04E-96 | -1.69E-46 |
| MS.gene056692 | MS.gene25011 | 0.856698 | 2.70E-62 | -1.69E-46 |
| MS.gene056761 | MS.gene25011 | -0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene25011 | -0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene056857 | MS.gene25011 | -0.800662 | 1.30E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene25011 | 0.819864 | 9.29E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene25011 | -0.826501 | 2.62E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene25011 | 0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene25011 | 0.816339 | 5.82E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene25011 | 0.801008 | 1.10E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene25011 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene25011 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene25011 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene25011 | 0.852348 | 4.90E-61 | -1.69E-46 |
| MS.gene057857 | MS.gene25011 | 0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene25011 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene25011 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene057986 | MS.gene25011 | 0.811099 | 8.29E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene25011 | 0.800946 | 1.13E-48 | -1.69E-46 |
| MS.gene058171 | MS.gene25011 | -0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene058175 | MS.gene25011 | -0.801225 | 9.96E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene25011 | -0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene25011 | -0.806551 | 7.79E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene25011 | -0.822668 | 2.09E-53 | -1.69E-46 |
| MS.gene058335 | MS.gene25011 | 0.820978 | 5.15E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene25011 | 0.826784 | 2.24E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene25011 | 0.836968 | 6.86E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene25011 | 0.915099 | 8.79E-85 | -1.69E-46 |
| MS.gene058544 | MS.gene25011 | 0.860834 | 1.57E-63 | -1.69E-46 |
| MS.gene058603 | MS.gene25011 | -0.80838 | 3.19E-50 | -1.69E-46 |
| MS.gene058719 | MS.gene25011 | 0.84787 | 8.79E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene25011 | 0.863951 | 1.72E-64 | -1.69E-46 |
| MS.gene058773 | MS.gene25011 | 0.90044 | 7.31E-78 | -1.69E-46 |
| MS.gene058838 | MS.gene25011 | 0.830837 | 2.34E-55 | -1.69E-46 |
| MS.gene058978 | MS.gene25011 | -0.809521 | 1.82E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene25011 | 0.947631 | 4.62E-106 | -1.69E-46 |
| MS.gene059023 | MS.gene25011 | 0.876611 | 1.22E-68 | -1.69E-46 |
| MS.gene059029 | MS.gene25011 | 0.845121 | 4.95E-59 | -1.69E-46 |
| MS.gene05912 | MS.gene25011 | 0.829462 | 5.08E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene25011 | 0.857619 | 1.44E-62 | -1.69E-46 |
| MS.gene05914 | MS.gene25011 | 0.807121 | 5.90E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene25011 | 0.827827 | 1.26E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene25011 | 0.939176 | 1.97E-99 | -1.69E-46 |
| MS.gene059718 | MS.gene25011 | 0.899538 | 1.79E-77 | -1.69E-46 |
| MS.gene059756 | MS.gene25011 | 0.862489 | 4.89E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene25011 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene25011 | 0.818003 | 2.46E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene25011 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene25011 | 0.921325 | 4.13E-88 | -1.69E-46 |
| MS.gene059902 | MS.gene25011 | 0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene25011 | -0.803401 | 3.55E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene25011 | 0.842233 | 2.93E-58 | -1.69E-46 |
| MS.gene060337 | MS.gene25011 | -0.841936 | 3.51E-58 | -1.69E-46 |
| MS.gene060341 | MS.gene25011 | 0.83619 | 1.08E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene25011 | 0.808961 | 2.39E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene25011 | -0.801581 | 8.42E-49 | -1.69E-46 |
| MS.gene060602 | MS.gene25011 | -0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene25011 | 0.919718 | 3.17E-87 | -1.69E-46 |
| MS.gene060728 | MS.gene25011 | 0.830073 | 3.61E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene25011 | 0.894052 | 3.54E-75 | -1.69E-46 |
| MS.gene060778 | MS.gene25011 | 0.889451 | 2.39E-73 | -1.69E-46 |
| MS.gene06077 | MS.gene25011 | 0.909529 | 5.15E-82 | -1.69E-46 |
| MS.gene06092 | MS.gene25011 | 0.809547 | 1.79E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene25011 | 0.88794 | 9.17E-73 | -1.69E-46 |
| MS.gene061134 | MS.gene25011 | 0.812572 | 3.96E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene25011 | 0.871554 | 6.25E-67 | -1.69E-46 |
| MS.gene061200 | MS.gene25011 | 0.800035 | 1.74E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48506 | MS.gene25011 | PPI |
| MS.gene25011 | MS.gene38715 | PPI |
| MS.gene25011 | MS.gene054642 | PPI |
| MS.gene25011 | MS.gene012982 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25011.t1 | MTR_8g023790 | 94.982 | 279 | 3 | 1 | 1 | 279 | 1 | 268 | 0.0 | 536 |
| MS.gene25011.t1 | MTR_2g042720 | 67.742 | 217 | 70 | 0 | 61 | 277 | 49 | 265 | 7.56e-107 | 311 |
| MS.gene25011.t1 | MTR_3g435460 | 50.000 | 244 | 112 | 5 | 36 | 277 | 15 | 250 | 3.11e-75 | 230 |
| MS.gene25011.t1 | MTR_3g435460 | 56.383 | 188 | 76 | 2 | 90 | 277 | 8 | 189 | 1.46e-69 | 213 |
| MS.gene25011.t1 | MTR_3g101670 | 50.237 | 211 | 100 | 4 | 66 | 273 | 51 | 259 | 1.03e-65 | 206 |
| MS.gene25011.t1 | MTR_5g098780 | 43.515 | 239 | 110 | 7 | 61 | 276 | 36 | 272 | 1.30e-52 | 173 |
| MS.gene25011.t1 | MTR_5g098785 | 42.500 | 240 | 112 | 7 | 61 | 276 | 37 | 274 | 5.95e-52 | 171 |
| MS.gene25011.t1 | MTR_6g033320 | 40.284 | 211 | 98 | 7 | 77 | 278 | 49 | 240 | 2.99e-40 | 140 |
| MS.gene25011.t1 | MTR_6g011880 | 35.581 | 267 | 120 | 12 | 43 | 274 | 13 | 262 | 1.48e-36 | 131 |
| MS.gene25011.t1 | MTR_4g094605 | 39.070 | 215 | 95 | 9 | 72 | 267 | 53 | 250 | 1.49e-36 | 131 |
| MS.gene25011.t1 | MTR_6g011870 | 39.035 | 228 | 97 | 10 | 72 | 274 | 52 | 262 | 1.51e-36 | 131 |
| MS.gene25011.t1 | MTR_6g011890 | 39.035 | 228 | 97 | 10 | 72 | 274 | 52 | 262 | 2.29e-36 | 130 |
| MS.gene25011.t1 | MTR_5g097280 | 37.931 | 232 | 105 | 10 | 59 | 267 | 34 | 249 | 3.32e-36 | 130 |
| MS.gene25011.t1 | MTR_1g026550 | 32.075 | 265 | 152 | 6 | 35 | 277 | 70 | 328 | 1.03e-35 | 130 |
| MS.gene25011.t1 | MTR_6g012110 | 38.605 | 215 | 96 | 9 | 72 | 267 | 52 | 249 | 2.14e-35 | 128 |
| MS.gene25011.t1 | MTR_6g012080 | 38.140 | 215 | 97 | 9 | 72 | 267 | 52 | 249 | 3.04e-35 | 127 |
| MS.gene25011.t1 | MTR_4g015570 | 33.591 | 259 | 94 | 5 | 73 | 277 | 53 | 287 | 8.01e-35 | 127 |
| MS.gene25011.t1 | MTR_2g008610 | 35.200 | 250 | 125 | 8 | 22 | 248 | 13 | 248 | 8.60e-34 | 124 |
| MS.gene25011.t1 | MTR_2g081090 | 34.274 | 248 | 124 | 10 | 43 | 267 | 17 | 248 | 9.41e-33 | 121 |
| MS.gene25011.t1 | MTR_2g081090 | 36.574 | 216 | 101 | 9 | 72 | 267 | 22 | 221 | 9.42e-33 | 120 |
| MS.gene25011.t1 | MTR_6g060175 | 38.140 | 215 | 96 | 7 | 72 | 267 | 74 | 270 | 7.22e-31 | 117 |
| MS.gene25011.t1 | MTR_6g043600 | 37.634 | 186 | 92 | 6 | 84 | 267 | 50 | 213 | 3.78e-27 | 105 |
| MS.gene25011.t1 | MTR_6g060175 | 35.814 | 215 | 91 | 8 | 72 | 267 | 74 | 260 | 1.05e-25 | 103 |
| MS.gene25011.t1 | MTR_3g070340 | 31.535 | 241 | 87 | 7 | 71 | 257 | 54 | 270 | 9.87e-25 | 100 |
| MS.gene25011.t1 | MTR_5g098770 | 47.945 | 73 | 37 | 1 | 205 | 277 | 21 | 92 | 9.66e-17 | 73.9 |
| MS.gene25011.t1 | MTR_2g436960 | 46.667 | 90 | 42 | 2 | 188 | 277 | 16 | 99 | 2.56e-16 | 73.2 |
| MS.gene25011.t1 | MTR_1g026550 | 34.058 | 138 | 73 | 4 | 35 | 159 | 70 | 202 | 7.34e-16 | 75.5 |
| MS.gene25011.t1 | MTR_0003s0060 | 41.667 | 96 | 50 | 2 | 182 | 277 | 3 | 92 | 2.36e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25011.t1 | AT3G61470 | 90.179 | 224 | 21 | 1 | 57 | 279 | 34 | 257 | 7.51e-150 | 419 |
| MS.gene25011.t1 | AT1G19150 | 62.212 | 217 | 82 | 0 | 61 | 277 | 52 | 268 | 5.18e-102 | 299 |
| MS.gene25011.t1 | AT3G47470 | 49.356 | 233 | 112 | 2 | 45 | 277 | 25 | 251 | 2.54e-75 | 230 |
| MS.gene25011.t1 | AT5G28450 | 91.262 | 103 | 9 | 0 | 177 | 279 | 71 | 173 | 1.04e-65 | 203 |
| MS.gene25011.t1 | AT1G45474 | 47.598 | 229 | 108 | 4 | 55 | 272 | 20 | 247 | 1.38e-63 | 200 |
| MS.gene25011.t1 | AT1G45474 | 47.598 | 229 | 108 | 4 | 55 | 272 | 20 | 247 | 1.38e-63 | 200 |
| MS.gene25011.t1 | AT1G61520 | 43.265 | 245 | 114 | 8 | 46 | 267 | 19 | 261 | 6.38e-54 | 176 |
| MS.gene25011.t1 | AT1G61520 | 43.265 | 245 | 114 | 8 | 46 | 267 | 19 | 261 | 6.38e-54 | 176 |
| MS.gene25011.t1 | AT1G61520 | 43.627 | 204 | 96 | 7 | 90 | 276 | 14 | 215 | 6.33e-44 | 149 |
| MS.gene25011.t1 | AT3G54890 | 42.439 | 205 | 90 | 7 | 77 | 272 | 48 | 233 | 2.02e-41 | 143 |
| MS.gene25011.t1 | AT1G29930 | 36.255 | 251 | 130 | 9 | 39 | 267 | 9 | 251 | 5.01e-38 | 135 |
| MS.gene25011.t1 | AT2G34420 | 35.484 | 248 | 134 | 8 | 39 | 267 | 9 | 249 | 6.09e-38 | 135 |
| MS.gene25011.t1 | AT2G05100 | 38.785 | 214 | 97 | 8 | 72 | 267 | 52 | 249 | 1.40e-37 | 134 |
| MS.gene25011.t1 | AT2G05070 | 38.785 | 214 | 97 | 8 | 72 | 267 | 52 | 249 | 1.73e-37 | 134 |
| MS.gene25011.t1 | AT1G15820 | 38.389 | 211 | 101 | 5 | 61 | 248 | 41 | 245 | 2.66e-37 | 133 |
| MS.gene25011.t1 | AT1G29920 | 35.857 | 251 | 131 | 9 | 39 | 267 | 9 | 251 | 2.83e-37 | 133 |
| MS.gene25011.t1 | AT1G29910 | 35.857 | 251 | 131 | 9 | 39 | 267 | 9 | 251 | 2.83e-37 | 133 |
| MS.gene25011.t1 | AT3G27690 | 39.512 | 205 | 108 | 6 | 72 | 267 | 53 | 250 | 1.70e-36 | 131 |
| MS.gene25011.t1 | AT2G34430 | 39.896 | 193 | 101 | 6 | 83 | 267 | 65 | 250 | 1.81e-36 | 131 |
| MS.gene25011.t1 | AT3G27690 | 37.850 | 214 | 99 | 8 | 72 | 267 | 85 | 282 | 2.70e-36 | 131 |
| MS.gene25011.t1 | AT5G01530 | 32.432 | 259 | 97 | 5 | 73 | 277 | 54 | 288 | 8.79e-34 | 124 |
| MS.gene25011.t1 | AT5G54270 | 38.308 | 201 | 92 | 7 | 84 | 267 | 64 | 249 | 1.66e-33 | 123 |
| MS.gene25011.t1 | AT3G08940 | 32.432 | 259 | 97 | 5 | 73 | 277 | 51 | 285 | 7.41e-33 | 122 |
| MS.gene25011.t1 | AT1G76570 | 35.185 | 216 | 124 | 5 | 73 | 274 | 110 | 323 | 2.03e-32 | 122 |
| MS.gene25011.t1 | AT4G10340 | 39.706 | 204 | 108 | 7 | 72 | 267 | 65 | 261 | 1.18e-30 | 116 |
| MS.gene25011.t1 | AT3G54890 | 37.073 | 205 | 67 | 6 | 77 | 272 | 48 | 199 | 3.00e-29 | 110 |
| MS.gene25011.t1 | AT3G54890 | 39.286 | 168 | 75 | 6 | 77 | 236 | 48 | 196 | 1.04e-28 | 109 |
| MS.gene25011.t1 | AT2G05100 | 33.478 | 230 | 112 | 10 | 72 | 279 | 52 | 262 | 6.82e-28 | 109 |
| MS.gene25011.t1 | AT2G40100 | 31.818 | 242 | 86 | 6 | 73 | 260 | 55 | 271 | 1.40e-25 | 102 |
| MS.gene25011.t1 | AT3G54890 | 58.333 | 60 | 25 | 0 | 77 | 136 | 48 | 107 | 7.85e-18 | 79.3 |
| MS.gene25011.t1 | AT3G08940 | 31.707 | 123 | 35 | 2 | 73 | 152 | 51 | 167 | 1.90e-11 | 62.8 |
Find 90 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATCTTTGTTAGGAATTC+TGG | 0.076031 | 8.1:-77034474 | None:intergenic |
| CTGCTTGAACATTCCATTTC+AGG | 0.144194 | 8.1:-77034401 | None:intergenic |
| GGCAGTCTCCCAGGAGATTT+TGG | 0.155478 | 8.1:+77033798 | MS.gene25011:CDS |
| CATGGAGGAGGGGTGCTTCC+TGG | 0.289446 | 8.1:-77033768 | None:intergenic |
| TTGGTTTGATCCACTTGGTT+GGG | 0.309908 | 8.1:+77034704 | MS.gene25011:CDS |
| TCAAGATACCAATCTTTGTT+AGG | 0.334265 | 8.1:-77034482 | None:intergenic |
| TTTGCTCACCTTGCTGATCC+TGG | 0.353914 | 8.1:+77034858 | MS.gene25011:CDS |
| CAATCTTTGTTAGGAATTCT+GGG | 0.354126 | 8.1:-77034473 | None:intergenic |
| GATCCACTTGGTTGGGGAAG+TGG | 0.368672 | 8.1:+77034711 | MS.gene25011:CDS |
| ACATTCCATTTCAGGCTCTC+TGG | 0.378172 | 8.1:-77034393 | None:intergenic |
| GGGAACCACAAAGGTCTATC+AGG | 0.385925 | 8.1:-77033747 | None:intergenic |
| GTATCTTGAACACACCTTCA+TGG | 0.393520 | 8.1:+77034496 | MS.gene25011:CDS |
| ATGGAGGAGGGGTGCTTCCT+GGG | 0.394126 | 8.1:-77033767 | None:intergenic |
| GGAAATTAAGAATGGGAGAT+TGG | 0.401117 | 8.1:+77034767 | MS.gene25011:CDS |
| ACCCCTCCTCCATGGCTAGA+TGG | 0.401270 | 8.1:+77033777 | MS.gene25011:CDS |
| AGCTTGTTGTTGGGAAAGAT+AGG | 0.401853 | 8.1:-77034648 | None:intergenic |
| ATTGGCTATGTTGGCTGTGA+TGG | 0.416001 | 8.1:+77034785 | MS.gene25011:CDS |
| GGAACCTCAAAAGCTTATCT+TGG | 0.416671 | 8.1:+77033645 | MS.gene25011:CDS |
| CTGAGCCTGATAGACCTTTG+TGG | 0.428063 | 8.1:+77033742 | MS.gene25011:CDS |
| GAGGTAGATCTCACTCTAAC+TGG | 0.428606 | 8.1:-77033702 | None:intergenic |
| TGTTGGCTGTGATGGGAGCT+TGG | 0.430184 | 8.1:+77034793 | MS.gene25011:CDS |
| CACTGCAGATGGGCAATGTT+GGG | 0.431773 | 8.1:+77034432 | MS.gene25011:CDS |
| CCAGAATTCCTAACAAAGAT+TGG | 0.434001 | 8.1:+77034474 | MS.gene25011:CDS |
| AGTTCCTGTGAGCTTGTTGT+TGG | 0.442103 | 8.1:-77034658 | None:intergenic |
| TAGGGTACCCTGGTGGACTT+TGG | 0.445153 | 8.1:+77034685 | MS.gene25011:CDS |
| TTTGGTTTGATCCACTTGGT+TGG | 0.450965 | 8.1:+77034703 | MS.gene25011:CDS |
| CTGATCCAGAGAGCCTGAAA+TGG | 0.461068 | 8.1:+77034388 | MS.gene25011:CDS |
| AGAACAAAGGAAATTAAGAA+TGG | 0.462272 | 8.1:+77034759 | MS.gene25011:CDS |
| TGGTTCTCCTCAGAAGCTTA+AGG | 0.470286 | 8.1:+77034731 | MS.gene25011:CDS |
| TGGTTTGATCCACTTGGTTG+GGG | 0.471868 | 8.1:+77034705 | MS.gene25011:CDS |
| TGGGCAATGTTGGGAGCAGC+AGG | 0.473188 | 8.1:+77034441 | MS.gene25011:CDS |
| GTCGGCCCATCTTCTACCCT+CGG | 0.479356 | 8.1:-77034595 | None:intergenic |
| CAGAGCTTGTGCACTGCAGA+TGG | 0.481288 | 8.1:+77034421 | MS.gene25011:CDS |
| GATAGACCTTTGTGGTTCCC+AGG | 0.481293 | 8.1:+77033750 | MS.gene25011:CDS |
| AGAGACTTGCCTTGGAGAGA+TGG | 0.488494 | 8.1:-77033244 | None:intergenic |
| GCATGCAGTTCTCAGAAGAA+TGG | 0.493993 | 8.1:+77033612 | MS.gene25011:intron |
| AAGCTCACAGGAACTGATGT+AGG | 0.494000 | 8.1:+77034666 | MS.gene25011:CDS |
| TGAGCAAAGAGGTTATCAAT+AGG | 0.495483 | 8.1:-77034843 | None:intergenic |
| GAATGGGAGATTGGCTATGT+TGG | 0.500964 | 8.1:+77034776 | MS.gene25011:CDS |
| GGATCAAATCCAAAATCTCC+TGG | 0.502658 | 8.1:-77033807 | None:intergenic |
| GGACTTTGGTTTGATCCACT+TGG | 0.512408 | 8.1:+77034699 | MS.gene25011:CDS |
| GAACAAAGGAAATTAAGAAT+GGG | 0.513870 | 8.1:+77034760 | MS.gene25011:CDS |
| GTGTTTAGAGAGACTTGCCT+TGG | 0.515872 | 8.1:-77033252 | None:intergenic |
| ACACCTTCATGGTACACTGC+TGG | 0.517592 | 8.1:+77034507 | MS.gene25011:CDS |
| GGGTCAGTGTTGACACAACC+TGG | 0.522086 | 8.1:-77034627 | None:intergenic |
| GTTCCTGTGAGCTTGTTGTT+GGG | 0.523440 | 8.1:-77034657 | None:intergenic |
| GTTGGGCCGAGGGTAGAAGA+TGG | 0.524347 | 8.1:+77034589 | MS.gene25011:CDS |
| GGATCAAACCAAAGTCCACC+AGG | 0.526848 | 8.1:-77034693 | None:intergenic |
| TTGGCTATGTTGGCTGTGAT+GGG | 0.528445 | 8.1:+77034786 | MS.gene25011:CDS |
| CTCAACTCCTTAAGCTTCTG+AGG | 0.529219 | 8.1:-77034738 | None:intergenic |
| TGGCTAGATGGCAGTCTCCC+AGG | 0.536159 | 8.1:+77033789 | MS.gene25011:CDS |
| TTGGGCCGAGGGTAGAAGAT+GGG | 0.541330 | 8.1:+77034590 | MS.gene25011:CDS |
| CAGCACATTTACACTGGCAC+TGG | 0.541333 | 8.1:+77034819 | MS.gene25011:CDS |
| TGGGCCGACATCCTCAATCC+AGG | 0.542725 | 8.1:+77034609 | MS.gene25011:CDS |
| CCTCAAAAGCTTATCTTGGA+AGG | 0.543042 | 8.1:+77033649 | MS.gene25011:CDS |
| GCCATCTAGCCATGGAGGAG+GGG | 0.546298 | 8.1:-77033778 | None:intergenic |
| TGCCATCTAGCCATGGAGGA+GGG | 0.550191 | 8.1:-77033779 | None:intergenic |
| CAGTGCCAGTGTAAATGTGC+TGG | 0.552448 | 8.1:-77034818 | None:intergenic |
| AGAGATGGCAACAGCTGCAA+TGG | 0.552836 | 8.1:-77033229 | None:intergenic |
| GCACTGCAGATGGGCAATGT+TGG | 0.556685 | 8.1:+77034431 | MS.gene25011:CDS |
| CTGCCATCTAGCCATGGAGG+AGG | 0.559386 | 8.1:-77033780 | None:intergenic |
| CAGGAAGCACCCCTCCTCCA+TGG | 0.569573 | 8.1:+77033769 | MS.gene25011:CDS |
| TCAGAAGAATGGATCACCCA+TGG | 0.581832 | 8.1:+77033623 | MS.gene25011:CDS |
| CAGCTGTTGCCATCTCTCCA+AGG | 0.589238 | 8.1:+77033235 | MS.gene25011:CDS |
| TTTCCCAACAACAAGCTCAC+AGG | 0.594755 | 8.1:+77034654 | MS.gene25011:CDS |
| AGAGCTTGTGCACTGCAGAT+GGG | 0.595843 | 8.1:+77034422 | MS.gene25011:CDS |
| TGGTTCCAGCACATTTACAC+TGG | 0.596820 | 8.1:+77034813 | MS.gene25011:CDS |
| AGCTGCTGCACACACTGTTG+AGG | 0.599426 | 8.1:-77033721 | None:intergenic |
| GGGAGACTGCCATCTAGCCA+TGG | 0.602036 | 8.1:-77033786 | None:intergenic |
| GCTTGTTGTTGGGAAAGATA+GGG | 0.609375 | 8.1:-77034647 | None:intergenic |
| GGAACTGATGTAGGGTACCC+TGG | 0.613660 | 8.1:+77034675 | MS.gene25011:CDS |
| GCTTAAGGAGTTGAGAACAA+AGG | 0.614983 | 8.1:+77034746 | MS.gene25011:CDS |
| GTGCTTCCTGGGAACCACAA+AGG | 0.617314 | 8.1:-77033756 | None:intergenic |
| GATCAAATCCAAAATCTCCT+GGG | 0.619038 | 8.1:-77033806 | None:intergenic |
| TTATCTTGGAAGGAAACTGA+AGG | 0.628619 | 8.1:+77033659 | MS.gene25011:CDS |
| AGCTCACAGGAACTGATGTA+GGG | 0.630925 | 8.1:+77034667 | MS.gene25011:CDS |
| TCTCCAGCAGTGTACCATGA+AGG | 0.631666 | 8.1:-77034510 | None:intergenic |
| TGTTGACACAACCTGGATTG+AGG | 0.633547 | 8.1:-77034620 | None:intergenic |
| CAGAAGAATGGATCACCCAT+GGG | 0.634694 | 8.1:+77033624 | MS.gene25011:CDS |
| GATCAGCAAGGTGAGCAAAG+AGG | 0.646872 | 8.1:-77034854 | None:intergenic |
| ACAACCTGGATTGAGGATGT+CGG | 0.654160 | 8.1:-77034613 | None:intergenic |
| GCGAAAATAGTAGCATGACC+AGG | 0.658859 | 8.1:-77034876 | None:intergenic |
| GAACCACTTCCCCAACCAAG+TGG | 0.665438 | 8.1:-77034714 | None:intergenic |
| TTAAGCTTACAAAGTCCAAG+AGG | 0.666846 | 8.1:-77033828 | None:intergenic |
| TAGCATGACCAGGATCAGCA+AGG | 0.674432 | 8.1:-77034866 | None:intergenic |
| AGACTGCCATCTAGCCATGG+AGG | 0.705683 | 8.1:-77033783 | None:intergenic |
| CTCAACTATGAAGAGTGTGG+TGG | 0.729773 | 8.1:-77034553 | None:intergenic |
| GAGCTCAACTATGAAGAGTG+TGG | 0.734291 | 8.1:-77034556 | None:intergenic |
| GATCAAACCAAAGTCCACCA+GGG | 0.744097 | 8.1:-77034692 | None:intergenic |
| ACTGATGTAGGGTACCCTGG+TGG | 0.744440 | 8.1:+77034678 | MS.gene25011:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAATATTAAACTTATTAA+CGG | - | chr8.1:77034235-77034254 | None:intergenic | 10.0% |
| !! | TTGAAAATAATCTTATAAAA+AGG | - | chr8.1:77034098-77034117 | None:intergenic | 10.0% |
| !!! | ACATATATATTTTTTATACT+TGG | - | chr8.1:77033580-77033599 | None:intergenic | 10.0% |
| !! | TAATAATAGTAATTTAGTAC+AGG | - | chr8.1:77035133-77035152 | None:intergenic | 15.0% |
| !!! | GTTTGACAAATATTTTTAAA+TGG | - | chr8.1:77033424-77033443 | None:intergenic | 15.0% |
| !! | CAACACTTTGATTAATATTA+TGG | - | chr8.1:77034350-77034369 | None:intergenic | 20.0% |
| !! | CATAATATTAATCAAAGTGT+TGG | + | chr8.1:77034348-77034367 | MS.gene25011:intron | 20.0% |
| !! | TAGAAGAAGAATAAACTATA+GGG | - | chr8.1:77035459-77035478 | None:intergenic | 20.0% |
| !! | TATCGTAATAAATACTAAGA+TGG | + | chr8.1:77034157-77034176 | MS.gene25011:intron | 20.0% |
| !! | TCAAGAAAAATTAAGAAAGT+TGG | - | chr8.1:77034259-77034278 | None:intergenic | 20.0% |
| !! | TTAGAAGAAGAATAAACTAT+AGG | - | chr8.1:77035460-77035479 | None:intergenic | 20.0% |
| !!! | CAATTTTTTTGTTACTGAAT+CGG | + | chr8.1:77033859-77033878 | MS.gene25011:intron | 20.0% |
| !!! | TCAAGAGGATTTTATATTTA+GGG | - | chr8.1:77034061-77034080 | None:intergenic | 20.0% |
| ! | AACAATATGCAATCTAAACT+AGG | - | chr8.1:77034922-77034941 | None:intergenic | 25.0% |
| ! | AATAGTAATTTAGTACAGGT+CGG | - | chr8.1:77035129-77035148 | None:intergenic | 25.0% |
| ! | ACTAAACCATTATAGTAGTT+TGG | - | chr8.1:77035017-77035036 | None:intergenic | 25.0% |
| ! | AGAACAAAGGAAATTAAGAA+TGG | + | chr8.1:77034759-77034778 | MS.gene25011:CDS | 25.0% |
| ! | ATATAGTGACCAATTTAACT+AGG | - | chr8.1:77033448-77033467 | None:intergenic | 25.0% |
| ! | ATTAAAATGCATCAAACACT+TGG | - | chr8.1:77035321-77035340 | None:intergenic | 25.0% |
| ! | GAACAAAGGAAATTAAGAAT+GGG | + | chr8.1:77034760-77034779 | MS.gene25011:CDS | 25.0% |
| ! | TATAGTGACCAATTTAACTA+GGG | - | chr8.1:77033447-77033466 | None:intergenic | 25.0% |
| !! | CTCAAGAGGATTTTATATTT+AGG | - | chr8.1:77034062-77034081 | None:intergenic | 25.0% |
| !! | TACTCTTTAGAAGAGAAAAT+TGG | - | chr8.1:77034192-77034211 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAAGGTGTCTTAA+CGG | + | chr8.1:77035250-77035269 | MS.gene25011:intron | 25.0% |
| AATATGCAATCTAAACTAGG+AGG | - | chr8.1:77034919-77034938 | None:intergenic | 30.0% | |
| AGATAATGAAAGTCTGATGA+AGG | - | chr8.1:77035396-77035415 | None:intergenic | 30.0% | |
| ATAGTGACCAATTTAACTAG+GGG | - | chr8.1:77033446-77033465 | None:intergenic | 30.0% | |
| CAATCTTTGTTAGGAATTCT+GGG | - | chr8.1:77034476-77034495 | None:intergenic | 30.0% | |
| CTTGATCAAATATCCGAATT+TGG | - | chr8.1:77034016-77034035 | None:intergenic | 30.0% | |
| GTTTAAAAACAGAACCAGTT+CGG | - | chr8.1:77035214-77035233 | None:intergenic | 30.0% | |
| TACCGTAGAAAATCCAAATT+CGG | + | chr8.1:77034000-77034019 | MS.gene25011:intron | 30.0% | |
| TCAAGATACCAATCTTTGTT+AGG | - | chr8.1:77034485-77034504 | None:intergenic | 30.0% | |
| TGCTAACCAAACTACTATAA+TGG | + | chr8.1:77035008-77035027 | MS.gene25011:intron | 30.0% | |
| TTATCTATTACTGCTACAAC+AGG | + | chr8.1:77035543-77035562 | MS.gene25011:intron | 30.0% | |
| TTTAGATTGCATATTGTTCG+TGG | + | chr8.1:77034924-77034943 | MS.gene25011:intron | 30.0% | |
| ! | ATAGTTGAGCTCATTTTCAT+CGG | + | chr8.1:77034567-77034586 | MS.gene25011:CDS | 30.0% |
| ! | ATCCGAATTTGGATTTTCTA+CGG | - | chr8.1:77034005-77034024 | None:intergenic | 30.0% |
| ! | GAGGATTTTATATTTAGGGA+CGG | - | chr8.1:77034057-77034076 | None:intergenic | 30.0% |
| ! | TATTGTTCGTGGTTTGATTT+AGG | + | chr8.1:77034935-77034954 | MS.gene25011:intron | 30.0% |
| ! | TTTTCTTGATTTCGTCAACA+TGG | + | chr8.1:77034270-77034289 | MS.gene25011:intron | 30.0% |
| !!! | GTCACAGTTTGATTTTTTCA+AGG | + | chr8.1:77035239-77035258 | MS.gene25011:intron | 30.0% |
| ATGAACCGTCTAATCAAGAT+CGG | - | chr8.1:77033948-77033967 | None:intergenic | 35.0% | |
| CAAAAAGAACCGAATTGTGA+CGG | + | chr8.1:77035161-77035180 | MS.gene25011:intron | 35.0% | |
| CCAATCTTTGTTAGGAATTC+TGG | - | chr8.1:77034477-77034496 | None:intergenic | 35.0% | |
| CCAGAATTCCTAACAAAGAT+TGG | + | chr8.1:77034474-77034493 | MS.gene25011:CDS | 35.0% | |
| GAGCAATGAAAAAACTCAAG+AGG | - | chr8.1:77034076-77034095 | None:intergenic | 35.0% | |
| GATCAAATCCAAAATCTCCT+GGG | - | chr8.1:77033809-77033828 | None:intergenic | 35.0% | |
| GGAAATTAAGAATGGGAGAT+TGG | + | chr8.1:77034767-77034786 | MS.gene25011:CDS | 35.0% | |
| GGTCATGTATTAAGAGACAA+CGG | + | chr8.1:77034291-77034310 | MS.gene25011:intron | 35.0% | |
| TGAGCAAAGAGGTTATCAAT+AGG | - | chr8.1:77034846-77034865 | None:intergenic | 35.0% | |
| TGTCAAACCCCTAGTTAAAT+TGG | + | chr8.1:77033436-77033455 | MS.gene25011:intron | 35.0% | |
| TTAAGCTTACAAAGTCCAAG+AGG | - | chr8.1:77033831-77033850 | None:intergenic | 35.0% | |
| TTATCTTGGAAGGAAACTGA+AGG | + | chr8.1:77033659-77033678 | MS.gene25011:CDS | 35.0% | |
| ! | GATTTTGGATTTGATCCTCT+TGG | + | chr8.1:77033813-77033832 | MS.gene25011:CDS | 35.0% |
| ! | GGATTTTCTACGGTAGTAAA+AGG | - | chr8.1:77033995-77034014 | None:intergenic | 35.0% |
| ! | GTTCAGTTTTACCAAACTGT+TGG | - | chr8.1:77034983-77035002 | None:intergenic | 35.0% |
| ! | GTTTTACCAAACTGTTGGAA+TGG | - | chr8.1:77034978-77034997 | None:intergenic | 35.0% |
| ! | GTTTTCTATTGAGGTAGTTC+AGG | - | chr8.1:77035067-77035086 | None:intergenic | 35.0% |
| ! | TGGTTTGAAAAAGTGCAGTT+TGG | - | chr8.1:77035089-77035108 | None:intergenic | 35.0% |
| ! | TTTTCTTAAACAGTCCTGAC+TGG | + | chr8.1:77035293-77035312 | MS.gene25011:intron | 35.0% |
| !! | TCTAAACTAGGAGGTATTGA+TGG | - | chr8.1:77034910-77034929 | None:intergenic | 35.0% |
| !!! | GTGGTCTTATTTTCCTTGTT+GGG | + | chr8.1:77034313-77034332 | MS.gene25011:intron | 35.0% |
| !!! | TGCAGTTTGGTTTTCTATTG+AGG | - | chr8.1:77035076-77035095 | None:intergenic | 35.0% |
| ACTGAACCATTCCAACAGTT+TGG | + | chr8.1:77034969-77034988 | MS.gene25011:intron | 40.0% | |
| ACTGTTGGAATGGTTCAGTT+CGG | - | chr8.1:77034968-77034987 | None:intergenic | 40.0% | |
| ATGAACTGTCCGTCACAATT+CGG | - | chr8.1:77035173-77035192 | None:intergenic | 40.0% | |
| ATGTAAGTGCAACAACTGCA+TGG | - | chr8.1:77033913-77033932 | None:intergenic | 40.0% | |
| CATGTATTAAGAGACAACGG+TGG | + | chr8.1:77034294-77034313 | MS.gene25011:intron | 40.0% | |
| CCTCAAAAGCTTATCTTGGA+AGG | + | chr8.1:77033649-77033668 | MS.gene25011:CDS | 40.0% | |
| CGGTTCACAAAGAATCAGTT+TGG | - | chr8.1:77035109-77035128 | None:intergenic | 40.0% | |
| CTGCTTGAACATTCCATTTC+AGG | - | chr8.1:77034404-77034423 | None:intergenic | 40.0% | |
| CTTGTCCGATCTTGATTAGA+CGG | + | chr8.1:77033940-77033959 | MS.gene25011:intron | 40.0% | |
| GCTTAAGGAGTTGAGAACAA+AGG | + | chr8.1:77034746-77034765 | MS.gene25011:CDS | 40.0% | |
| GGAACCTCAAAAGCTTATCT+TGG | + | chr8.1:77033645-77033664 | MS.gene25011:CDS | 40.0% | |
| GGATCAAATCCAAAATCTCC+TGG | - | chr8.1:77033810-77033829 | None:intergenic | 40.0% | |
| GGTCATTAGTATTCCCAACA+AGG | - | chr8.1:77034329-77034348 | None:intergenic | 40.0% | |
| GTATCTTGAACACACCTTCA+TGG | + | chr8.1:77034496-77034515 | MS.gene25011:CDS | 40.0% | |
| TCGGTTCATAACCACATAAC+TGG | - | chr8.1:77035043-77035062 | None:intergenic | 40.0% | |
| TGAATCAAGCTAAACCGAAC+TGG | + | chr8.1:77035197-77035216 | MS.gene25011:intron | 40.0% | |
| ! | CCTTCCAAGATAAGCTTTTG+AGG | - | chr8.1:77033652-77033671 | None:intergenic | 40.0% |
| ! | CGTCACAATTCGGTTCTTTT+TGG | - | chr8.1:77035163-77035182 | None:intergenic | 40.0% |
| ! | CTATTGAGGTAGTTCAGGTT+CGG | - | chr8.1:77035062-77035081 | None:intergenic | 40.0% |
| ! | GGTTTAGTTCACCAGTTATG+TGG | + | chr8.1:77035029-77035048 | MS.gene25011:intron | 40.0% |
| ! | TTCAAGGTGTCTTAACGGTT+TGG | + | chr8.1:77035255-77035274 | MS.gene25011:intron | 40.0% |
| ! | TTGAGCTCATTTTCATCGGT+TGG | + | chr8.1:77034571-77034590 | MS.gene25011:CDS | 40.0% |
| ! | TTGGTTTGATCCACTTGGTT+GGG | + | chr8.1:77034704-77034723 | MS.gene25011:CDS | 40.0% |
| !! | AGCTTGTTGTTGGGAAAGAT+AGG | - | chr8.1:77034651-77034670 | None:intergenic | 40.0% |
| !! | GCTTGTTGTTGGGAAAGATA+GGG | - | chr8.1:77034650-77034669 | None:intergenic | 40.0% |
| !! | TGAGCTCATTTTCATCGGTT+GGG | + | chr8.1:77034572-77034591 | MS.gene25011:CDS | 40.0% |
| !! | TTTGGTTTGATCCACTTGGT+TGG | + | chr8.1:77034703-77034722 | MS.gene25011:CDS | 40.0% |
| !!! | ATAAGCTTTTGAGGTTCCCA+TGG | - | chr8.1:77033643-77033662 | None:intergenic | 40.0% |
| !!! | GATGAAGGACTGTTTTAGTG+TGG | - | chr8.1:77035381-77035400 | None:intergenic | 40.0% |
| !!! | GGTGGTCTTATTTTCCTTGT+TGG | + | chr8.1:77034312-77034331 | MS.gene25011:intron | 40.0% |
| !!! | TAAGCTTTTGAGGTTCCCAT+GGG | - | chr8.1:77033642-77033661 | None:intergenic | 40.0% |
| AAGCTCACAGGAACTGATGT+AGG | + | chr8.1:77034666-77034685 | MS.gene25011:CDS | 45.0% | |
| ACAACCTGGATTGAGGATGT+CGG | - | chr8.1:77034616-77034635 | None:intergenic | 45.0% | |
| ACATTCCATTTCAGGCTCTC+TGG | - | chr8.1:77034396-77034415 | None:intergenic | 45.0% | |
| AGCTCACAGGAACTGATGTA+GGG | + | chr8.1:77034667-77034686 | MS.gene25011:CDS | 45.0% | |
| CAGAAGAATGGATCACCCAT+GGG | + | chr8.1:77033624-77033643 | MS.gene25011:CDS | 45.0% | |
| CAGTGTCTGACTCTAGTGAT+AGG | + | chr8.1:77033330-77033349 | MS.gene25011:intron | 45.0% | |
| CTCAACTCCTTAAGCTTCTG+AGG | - | chr8.1:77034741-77034760 | None:intergenic | 45.0% | |
| GAGCTCAACTATGAAGAGTG+TGG | - | chr8.1:77034559-77034578 | None:intergenic | 45.0% | |
| GAGGTAGATCTCACTCTAAC+TGG | - | chr8.1:77033705-77033724 | None:intergenic | 45.0% | |
| GATCAAACCAAAGTCCACCA+GGG | - | chr8.1:77034695-77034714 | None:intergenic | 45.0% | |
| GCATGCAGTTCTCAGAAGAA+TGG | + | chr8.1:77033612-77033631 | MS.gene25011:intron | 45.0% | |
| GCGAAAATAGTAGCATGACC+AGG | - | chr8.1:77034879-77034898 | None:intergenic | 45.0% | |
| GTGTTTAGAGAGACTTGCCT+TGG | - | chr8.1:77033255-77033274 | None:intergenic | 45.0% | |
| TCAAACACTTGGTTCCAGTC+AGG | - | chr8.1:77035310-77035329 | None:intergenic | 45.0% | |
| TCAGAAGAATGGATCACCCA+TGG | + | chr8.1:77033623-77033642 | MS.gene25011:CDS | 45.0% | |
| TGGTTCCAGCACATTTACAC+TGG | + | chr8.1:77034813-77034832 | MS.gene25011:CDS | 45.0% | |
| TGGTTCTCCTCAGAAGCTTA+AGG | + | chr8.1:77034731-77034750 | MS.gene25011:CDS | 45.0% | |
| TGGTTTGATCCACTTGGTTG+GGG | + | chr8.1:77034705-77034724 | MS.gene25011:CDS | 45.0% | |
| TGTTGACACAACCTGGATTG+AGG | - | chr8.1:77034623-77034642 | None:intergenic | 45.0% | |
| TTGCGCAACTGTGTCAACTT+TGG | + | chr8.1:77033969-77033988 | MS.gene25011:intron | 45.0% | |
| TTTCCCAACAACAAGCTCAC+AGG | + | chr8.1:77034654-77034673 | MS.gene25011:CDS | 45.0% | |
| ! | ATTGGCTATGTTGGCTGTGA+TGG | + | chr8.1:77034785-77034804 | MS.gene25011:CDS | 45.0% |
| ! | CTCAACTATGAAGAGTGTGG+TGG | - | chr8.1:77034556-77034575 | None:intergenic | 45.0% |
| ! | GAATGGGAGATTGGCTATGT+TGG | + | chr8.1:77034776-77034795 | MS.gene25011:CDS | 45.0% |
| ! | TTGGCTATGTTGGCTGTGAT+GGG | + | chr8.1:77034786-77034805 | MS.gene25011:CDS | 45.0% |
| !! | AGTTCCTGTGAGCTTGTTGT+TGG | - | chr8.1:77034661-77034680 | None:intergenic | 45.0% |
| !! | GGACTTTGGTTTGATCCACT+TGG | + | chr8.1:77034699-77034718 | MS.gene25011:CDS | 45.0% |
| !! | GTTCCTGTGAGCTTGTTGTT+GGG | - | chr8.1:77034660-77034679 | None:intergenic | 45.0% |
| ACACCTTCATGGTACACTGC+TGG | + | chr8.1:77034507-77034526 | MS.gene25011:CDS | 50.0% | |
| AGAGACTTGCCTTGGAGAGA+TGG | - | chr8.1:77033247-77033266 | None:intergenic | 50.0% | |
| AGAGATGGCAACAGCTGCAA+TGG | - | chr8.1:77033232-77033251 | None:intergenic | 50.0% | |
| AGAGCTTGTGCACTGCAGAT+GGG | + | chr8.1:77034422-77034441 | MS.gene25011:CDS | 50.0% | |
| CACTGCAGATGGGCAATGTT+GGG | + | chr8.1:77034432-77034451 | MS.gene25011:CDS | 50.0% | |
| CAGCACATTTACACTGGCAC+TGG | + | chr8.1:77034819-77034838 | MS.gene25011:CDS | 50.0% | |
| CAGTGCCAGTGTAAATGTGC+TGG | - | chr8.1:77034821-77034840 | None:intergenic | 50.0% | |
| CTGAGCCTGATAGACCTTTG+TGG | + | chr8.1:77033742-77033761 | MS.gene25011:CDS | 50.0% | |
| CTGATCCAGAGAGCCTGAAA+TGG | + | chr8.1:77034388-77034407 | MS.gene25011:CDS | 50.0% | |
| GATAGACCTTTGTGGTTCCC+AGG | + | chr8.1:77033750-77033769 | MS.gene25011:CDS | 50.0% | |
| GATCAGCAAGGTGAGCAAAG+AGG | - | chr8.1:77034857-77034876 | None:intergenic | 50.0% | |
| GGATCAAACCAAAGTCCACC+AGG | - | chr8.1:77034696-77034715 | None:intergenic | 50.0% | |
| GGGAACCACAAAGGTCTATC+AGG | - | chr8.1:77033750-77033769 | None:intergenic | 50.0% | |
| TAGCATGACCAGGATCAGCA+AGG | - | chr8.1:77034869-77034888 | None:intergenic | 50.0% | |
| TCTCCAGCAGTGTACCATGA+AGG | - | chr8.1:77034513-77034532 | None:intergenic | 50.0% | |
| TTTGCTCACCTTGCTGATCC+TGG | + | chr8.1:77034858-77034877 | MS.gene25011:CDS | 50.0% | |
| !! | ATTTTCATCGGTTGGGCCGA+GGG | + | chr8.1:77034579-77034598 | MS.gene25011:CDS | 50.0% |
| AGACTGCCATCTAGCCATGG+AGG | - | chr8.1:77033786-77033805 | None:intergenic | 55.0% | |
| AGCTGCTGCACACACTGTTG+AGG | - | chr8.1:77033724-77033743 | None:intergenic | 55.0% | |
| CAGAGCTTGTGCACTGCAGA+TGG | + | chr8.1:77034421-77034440 | MS.gene25011:CDS | 55.0% | |
| CAGCTGTTGCCATCTCTCCA+AGG | + | chr8.1:77033235-77033254 | MS.gene25011:CDS | 55.0% | |
| GAACCACTTCCCCAACCAAG+TGG | - | chr8.1:77034717-77034736 | None:intergenic | 55.0% | |
| GATCCACTTGGTTGGGGAAG+TGG | + | chr8.1:77034711-77034730 | MS.gene25011:CDS | 55.0% | |
| GCACTGCAGATGGGCAATGT+TGG | + | chr8.1:77034431-77034450 | MS.gene25011:CDS | 55.0% | |
| GTGCTTCCTGGGAACCACAA+AGG | - | chr8.1:77033759-77033778 | None:intergenic | 55.0% | |
| TGCCATCTAGCCATGGAGGA+GGG | - | chr8.1:77033782-77033801 | None:intergenic | 55.0% | |
| TTGGGCCGAGGGTAGAAGAT+GGG | + | chr8.1:77034590-77034609 | MS.gene25011:CDS | 55.0% | |
| ! | ACTGATGTAGGGTACCCTGG+TGG | + | chr8.1:77034678-77034697 | MS.gene25011:CDS | 55.0% |
| ! | GGAACTGATGTAGGGTACCC+TGG | + | chr8.1:77034675-77034694 | MS.gene25011:CDS | 55.0% |
| ! | GGCAGTCTCCCAGGAGATTT+TGG | + | chr8.1:77033798-77033817 | MS.gene25011:CDS | 55.0% |
| ! | TGTTGGCTGTGATGGGAGCT+TGG | + | chr8.1:77034793-77034812 | MS.gene25011:CDS | 55.0% |
| !! | CATTTTCATCGGTTGGGCCG+AGG | + | chr8.1:77034578-77034597 | MS.gene25011:CDS | 55.0% |
| !! | GGGTCAGTGTTGACACAACC+TGG | - | chr8.1:77034630-77034649 | None:intergenic | 55.0% |
| !! | TAGGGTACCCTGGTGGACTT+TGG | + | chr8.1:77034685-77034704 | MS.gene25011:CDS | 55.0% |
| ACCCCTCCTCCATGGCTAGA+TGG | + | chr8.1:77033777-77033796 | MS.gene25011:CDS | 60.0% | |
| CTGCCATCTAGCCATGGAGG+AGG | - | chr8.1:77033783-77033802 | None:intergenic | 60.0% | |
| GCCATCTAGCCATGGAGGAG+GGG | - | chr8.1:77033781-77033800 | None:intergenic | 60.0% | |
| GGGAGACTGCCATCTAGCCA+TGG | - | chr8.1:77033789-77033808 | None:intergenic | 60.0% | |
| GTCGGCCCATCTTCTACCCT+CGG | - | chr8.1:77034598-77034617 | None:intergenic | 60.0% | |
| GTTGGGCCGAGGGTAGAAGA+TGG | + | chr8.1:77034589-77034608 | MS.gene25011:CDS | 60.0% | |
| TGGCTAGATGGCAGTCTCCC+AGG | + | chr8.1:77033789-77033808 | MS.gene25011:CDS | 60.0% | |
| TGGGCAATGTTGGGAGCAGC+AGG | + | chr8.1:77034441-77034460 | MS.gene25011:CDS | 60.0% | |
| TGGGCCGACATCCTCAATCC+AGG | + | chr8.1:77034609-77034628 | MS.gene25011:CDS | 60.0% | |
| !! | ATGGAGGAGGGGTGCTTCCT+GGG | - | chr8.1:77033770-77033789 | None:intergenic | 60.0% |
| !! | CAGGAAGCACCCCTCCTCCA+TGG | + | chr8.1:77033769-77033788 | MS.gene25011:CDS | 65.0% |
| !! | CATGGAGGAGGGGTGCTTCC+TGG | - | chr8.1:77033771-77033790 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 77033204 | 77035582 | 77033204 | ID=MS.gene25011 |
| chr8.1 | mRNA | 77033204 | 77035582 | 77033204 | ID=MS.gene25011.t1;Parent=MS.gene25011 |
| chr8.1 | exon | 77033204 | 77033289 | 77033204 | ID=MS.gene25011.t1.exon1;Parent=MS.gene25011.t1 |
| chr8.1 | CDS | 77033204 | 77033289 | 77033204 | ID=cds.MS.gene25011.t1;Parent=MS.gene25011.t1 |
| chr8.1 | exon | 77033620 | 77033840 | 77033620 | ID=MS.gene25011.t1.exon2;Parent=MS.gene25011.t1 |
| chr8.1 | CDS | 77033620 | 77033840 | 77033620 | ID=cds.MS.gene25011.t1;Parent=MS.gene25011.t1 |
| chr8.1 | exon | 77034385 | 77034899 | 77034385 | ID=MS.gene25011.t1.exon3;Parent=MS.gene25011.t1 |
| chr8.1 | CDS | 77034385 | 77034899 | 77034385 | ID=cds.MS.gene25011.t1;Parent=MS.gene25011.t1 |
| chr8.1 | exon | 77035565 | 77035582 | 77035565 | ID=MS.gene25011.t1.exon4;Parent=MS.gene25011.t1 |
| chr8.1 | CDS | 77035565 | 77035582 | 77035565 | ID=cds.MS.gene25011.t1;Parent=MS.gene25011.t1 |
| Gene Sequence |
| Protein sequence |
