Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066782.t1 | GAU36126.1 | 78.1 | 617 | 126 | 5 | 1 | 616 | 444 | 1052 | 3.20E-263 | 917.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066782.t1 | A0A2Z6MW28 | 78.1 | 617 | 126 | 5 | 1 | 616 | 444 | 1052 | 2.3e-263 | 917.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene066782 | 0.84353 | 1.32E-58 | -1.69E-46 |
MS.gene049159 | MS.gene066782 | 0.815748 | 7.89E-52 | -1.69E-46 |
MS.gene049254 | MS.gene066782 | 0.848829 | 4.78E-60 | -1.69E-46 |
MS.gene049271 | MS.gene066782 | 0.801224 | 9.96E-49 | -1.69E-46 |
MS.gene049272 | MS.gene066782 | 0.819506 | 1.12E-52 | -1.69E-46 |
MS.gene049343 | MS.gene066782 | 0.846609 | 1.95E-59 | -1.69E-46 |
MS.gene049350 | MS.gene066782 | 0.810076 | 1.38E-50 | -1.69E-46 |
MS.gene049404 | MS.gene066782 | 0.837771 | 4.27E-57 | -1.69E-46 |
MS.gene049435 | MS.gene066782 | 0.830252 | 3.26E-55 | -1.69E-46 |
MS.gene049501 | MS.gene066782 | 0.825564 | 4.38E-54 | -1.69E-46 |
MS.gene049672 | MS.gene066782 | 0.812325 | 4.49E-51 | -1.69E-46 |
MS.gene049711 | MS.gene066782 | 0.862798 | 3.93E-64 | -1.69E-46 |
MS.gene049824 | MS.gene066782 | 0.806753 | 7.06E-50 | -1.69E-46 |
MS.gene049825 | MS.gene066782 | 0.82788 | 1.23E-54 | -1.69E-46 |
MS.gene049850 | MS.gene066782 | 0.859537 | 3.86E-63 | -1.69E-46 |
MS.gene049873 | MS.gene066782 | 0.810228 | 1.28E-50 | -1.69E-46 |
MS.gene050026 | MS.gene066782 | 0.808792 | 2.60E-50 | -1.69E-46 |
MS.gene050137 | MS.gene066782 | 0.807993 | 3.85E-50 | -1.69E-46 |
MS.gene050156 | MS.gene066782 | 0.852648 | 4.02E-61 | -1.69E-46 |
MS.gene050251 | MS.gene066782 | 0.806562 | 7.74E-50 | -1.69E-46 |
MS.gene050355 | MS.gene066782 | 0.804783 | 1.83E-49 | -1.69E-46 |
MS.gene050442 | MS.gene066782 | 0.814462 | 1.52E-51 | -1.69E-46 |
MS.gene05045 | MS.gene066782 | 0.839163 | 1.87E-57 | -1.69E-46 |
MS.gene050559 | MS.gene066782 | 0.826517 | 2.60E-54 | -1.69E-46 |
MS.gene050561 | MS.gene066782 | 0.830313 | 3.15E-55 | -1.69E-46 |
MS.gene050562 | MS.gene066782 | 0.817885 | 2.61E-52 | -1.69E-46 |
MS.gene050719 | MS.gene066782 | 0.805292 | 1.43E-49 | -1.69E-46 |
MS.gene050721 | MS.gene066782 | 0.804867 | 1.76E-49 | -1.69E-46 |
MS.gene050759 | MS.gene066782 | 0.802396 | 5.72E-49 | -1.69E-46 |
MS.gene050780 | MS.gene066782 | 0.811808 | 5.82E-51 | -1.69E-46 |
MS.gene050828 | MS.gene066782 | 0.80096 | 1.13E-48 | -1.69E-46 |
MS.gene050844 | MS.gene066782 | 0.831597 | 1.53E-55 | -1.69E-46 |
MS.gene051018 | MS.gene066782 | 0.818408 | 1.99E-52 | -1.69E-46 |
MS.gene051198 | MS.gene066782 | 0.819932 | 8.96E-53 | -1.69E-46 |
MS.gene051247 | MS.gene066782 | 0.856164 | 3.87E-62 | -1.69E-46 |
MS.gene051279 | MS.gene066782 | 0.847597 | 1.05E-59 | -1.69E-46 |
MS.gene051388 | MS.gene066782 | 0.839547 | 1.48E-57 | -1.69E-46 |
MS.gene05157 | MS.gene066782 | 0.807896 | 4.04E-50 | -1.69E-46 |
MS.gene051594 | MS.gene066782 | 0.826874 | 2.13E-54 | -1.69E-46 |
MS.gene051700 | MS.gene066782 | 0.831188 | 1.92E-55 | -1.69E-46 |
MS.gene051719 | MS.gene066782 | 0.854467 | 1.21E-61 | -1.69E-46 |
MS.gene051720 | MS.gene066782 | 0.85828 | 9.18E-63 | -1.69E-46 |
MS.gene051744 | MS.gene066782 | 0.884207 | 2.34E-71 | -1.69E-46 |
MS.gene051957 | MS.gene066782 | 0.836788 | 7.62E-57 | -1.69E-46 |
MS.gene052012 | MS.gene066782 | 0.813225 | 2.85E-51 | -1.69E-46 |
MS.gene052020 | MS.gene066782 | 0.82876 | 7.51E-55 | -1.69E-46 |
MS.gene052037 | MS.gene066782 | 0.80341 | 3.53E-49 | -1.69E-46 |
MS.gene052323 | MS.gene066782 | 0.808947 | 2.41E-50 | -1.69E-46 |
MS.gene052384 | MS.gene066782 | 0.805514 | 1.29E-49 | -1.69E-46 |
MS.gene052488 | MS.gene066782 | 0.812082 | 5.07E-51 | -1.69E-46 |
MS.gene052516 | MS.gene066782 | 0.83921 | 1.82E-57 | -1.69E-46 |
MS.gene052519 | MS.gene066782 | 0.854667 | 1.06E-61 | -1.69E-46 |
MS.gene052582 | MS.gene066782 | 0.858566 | 7.54E-63 | -1.69E-46 |
MS.gene052584 | MS.gene066782 | 0.866031 | 3.84E-65 | -1.69E-46 |
MS.gene052611 | MS.gene066782 | 0.861028 | 1.37E-63 | -1.69E-46 |
MS.gene052612 | MS.gene066782 | 0.802814 | 4.69E-49 | -1.69E-46 |
MS.gene052773 | MS.gene066782 | 0.855729 | 5.19E-62 | -1.69E-46 |
MS.gene052863 | MS.gene066782 | 0.820045 | 8.44E-53 | -1.69E-46 |
MS.gene052896 | MS.gene066782 | 0.816162 | 6.37E-52 | -1.69E-46 |
MS.gene053008 | MS.gene066782 | 0.808234 | 3.42E-50 | -1.69E-46 |
MS.gene053054 | MS.gene066782 | -0.813696 | 2.25E-51 | -1.69E-46 |
MS.gene053079 | MS.gene066782 | 0.805807 | 1.12E-49 | -1.69E-46 |
MS.gene053122 | MS.gene066782 | 0.807773 | 4.29E-50 | -1.69E-46 |
MS.gene053144 | MS.gene066782 | 0.828156 | 1.05E-54 | -1.69E-46 |
MS.gene053166 | MS.gene066782 | 0.806041 | 9.97E-50 | -1.69E-46 |
MS.gene053221 | MS.gene066782 | 0.817349 | 3.45E-52 | -1.69E-46 |
MS.gene053226 | MS.gene066782 | 0.900402 | 7.59E-78 | -1.69E-46 |
MS.gene053592 | MS.gene066782 | 0.807431 | 5.07E-50 | -1.69E-46 |
MS.gene053599 | MS.gene066782 | 0.812184 | 4.82E-51 | -1.69E-46 |
MS.gene053966 | MS.gene066782 | 0.812104 | 5.02E-51 | -1.69E-46 |
MS.gene053998 | MS.gene066782 | 0.811825 | 5.77E-51 | -1.69E-46 |
MS.gene05415 | MS.gene066782 | 0.801473 | 8.85E-49 | -1.69E-46 |
MS.gene054236 | MS.gene066782 | 0.801697 | 7.97E-49 | -1.69E-46 |
MS.gene05423 | MS.gene066782 | 0.820161 | 7.94E-53 | -1.69E-46 |
MS.gene054467 | MS.gene066782 | 0.821624 | 3.66E-53 | -1.69E-46 |
MS.gene054468 | MS.gene066782 | 0.816155 | 6.40E-52 | -1.69E-46 |
MS.gene054576 | MS.gene066782 | 0.819833 | 9.43E-53 | -1.69E-46 |
MS.gene054584 | MS.gene066782 | 0.830918 | 2.24E-55 | -1.69E-46 |
MS.gene05458 | MS.gene066782 | 0.835087 | 2.06E-56 | -1.69E-46 |
MS.gene054651 | MS.gene066782 | 0.857819 | 1.26E-62 | -1.69E-46 |
MS.gene05468 | MS.gene066782 | 0.810926 | 9.04E-51 | -1.69E-46 |
MS.gene054775 | MS.gene066782 | 0.865617 | 5.19E-65 | -1.69E-46 |
MS.gene054801 | MS.gene066782 | 0.811153 | 8.07E-51 | -1.69E-46 |
MS.gene054991 | MS.gene066782 | 0.820028 | 8.52E-53 | -1.69E-46 |
MS.gene055166 | MS.gene066782 | 0.807389 | 5.18E-50 | -1.69E-46 |
MS.gene055227 | MS.gene066782 | 0.812192 | 4.80E-51 | -1.69E-46 |
MS.gene055357 | MS.gene066782 | 0.817117 | 3.90E-52 | -1.69E-46 |
MS.gene055465 | MS.gene066782 | 0.826882 | 2.13E-54 | -1.69E-46 |
MS.gene055466 | MS.gene066782 | 0.84762 | 1.03E-59 | -1.69E-46 |
MS.gene055468 | MS.gene066782 | 0.829688 | 4.47E-55 | -1.69E-46 |
MS.gene055512 | MS.gene066782 | 0.82388 | 1.09E-53 | -1.69E-46 |
MS.gene055513 | MS.gene066782 | 0.807876 | 4.08E-50 | -1.69E-46 |
MS.gene055537 | MS.gene066782 | 0.813701 | 2.24E-51 | -1.69E-46 |
MS.gene055580 | MS.gene066782 | -0.82022 | 7.69E-53 | -1.69E-46 |
MS.gene055586 | MS.gene066782 | 0.822137 | 2.78E-53 | -1.69E-46 |
MS.gene055589 | MS.gene066782 | 0.815847 | 7.50E-52 | -1.69E-46 |
MS.gene055694 | MS.gene066782 | 0.803598 | 3.23E-49 | -1.69E-46 |
MS.gene055778 | MS.gene066782 | 0.826059 | 3.34E-54 | -1.69E-46 |
MS.gene055818 | MS.gene066782 | 0.845635 | 3.59E-59 | -1.69E-46 |
MS.gene055926 | MS.gene066782 | 0.821749 | 3.42E-53 | -1.69E-46 |
MS.gene05604 | MS.gene066782 | 0.815846 | 7.50E-52 | -1.69E-46 |
MS.gene056050 | MS.gene066782 | 0.863389 | 2.58E-64 | -1.69E-46 |
MS.gene056162 | MS.gene066782 | 0.814851 | 1.25E-51 | -1.69E-46 |
MS.gene056174 | MS.gene066782 | 0.834113 | 3.62E-56 | -1.69E-46 |
MS.gene056308 | MS.gene066782 | 0.847271 | 1.29E-59 | -1.69E-46 |
MS.gene056366 | MS.gene066782 | 0.845568 | 3.74E-59 | -1.69E-46 |
MS.gene056373 | MS.gene066782 | 0.803188 | 3.93E-49 | -1.69E-46 |
MS.gene056553 | MS.gene066782 | 0.811308 | 7.47E-51 | -1.69E-46 |
MS.gene056595 | MS.gene066782 | 0.839872 | 1.22E-57 | -1.69E-46 |
MS.gene05686 | MS.gene066782 | 0.833933 | 4.01E-56 | -1.69E-46 |
MS.gene057026 | MS.gene066782 | 0.819191 | 1.32E-52 | -1.69E-46 |
MS.gene057314 | MS.gene066782 | 0.826791 | 2.24E-54 | -1.69E-46 |
MS.gene057444 | MS.gene066782 | 0.839228 | 1.80E-57 | -1.69E-46 |
MS.gene057693 | MS.gene066782 | 0.835888 | 1.29E-56 | -1.69E-46 |
MS.gene057915 | MS.gene066782 | 0.862534 | 4.73E-64 | -1.69E-46 |
MS.gene058010 | MS.gene066782 | 0.808965 | 2.39E-50 | -1.69E-46 |
MS.gene058037 | MS.gene066782 | 0.817718 | 2.85E-52 | -1.69E-46 |
MS.gene058339 | MS.gene066782 | 0.805145 | 1.54E-49 | -1.69E-46 |
MS.gene05847 | MS.gene066782 | 0.830577 | 2.72E-55 | -1.69E-46 |
MS.gene058625 | MS.gene066782 | 0.869401 | 3.18E-66 | -1.69E-46 |
MS.gene058636 | MS.gene066782 | 0.834792 | 2.44E-56 | -1.69E-46 |
MS.gene058668 | MS.gene066782 | 0.810042 | 1.40E-50 | -1.69E-46 |
MS.gene058829 | MS.gene066782 | 0.819841 | 9.40E-53 | -1.69E-46 |
MS.gene058979 | MS.gene066782 | 0.832247 | 1.05E-55 | -1.69E-46 |
MS.gene05897 | MS.gene066782 | 0.805195 | 1.50E-49 | -1.69E-46 |
MS.gene059015 | MS.gene066782 | 0.829337 | 5.45E-55 | -1.69E-46 |
MS.gene059084 | MS.gene066782 | 0.808246 | 3.40E-50 | -1.69E-46 |
MS.gene059272 | MS.gene066782 | 0.841095 | 5.85E-58 | -1.69E-46 |
MS.gene05950 | MS.gene066782 | 0.801776 | 7.68E-49 | -1.69E-46 |
MS.gene05954 | MS.gene066782 | 0.806344 | 8.61E-50 | -1.69E-46 |
MS.gene059570 | MS.gene066782 | 0.841136 | 5.71E-58 | -1.69E-46 |
MS.gene059601 | MS.gene066782 | 0.818152 | 2.27E-52 | -1.69E-46 |
MS.gene059602 | MS.gene066782 | 0.83343 | 5.36E-56 | -1.69E-46 |
MS.gene059625 | MS.gene066782 | 0.861221 | 1.19E-63 | -1.69E-46 |
MS.gene059725 | MS.gene066782 | 0.83227 | 1.04E-55 | -1.69E-46 |
MS.gene059842 | MS.gene066782 | 0.843585 | 1.28E-58 | -1.69E-46 |
MS.gene060312 | MS.gene066782 | 0.810618 | 1.05E-50 | -1.69E-46 |
MS.gene060322 | MS.gene066782 | 0.830024 | 3.71E-55 | -1.69E-46 |
MS.gene060352 | MS.gene066782 | 0.810422 | 1.16E-50 | -1.69E-46 |
MS.gene060429 | MS.gene066782 | 0.814969 | 1.18E-51 | -1.69E-46 |
MS.gene060519 | MS.gene066782 | 0.808563 | 2.91E-50 | -1.69E-46 |
MS.gene060521 | MS.gene066782 | 0.809608 | 1.74E-50 | -1.69E-46 |
MS.gene060587 | MS.gene066782 | 0.820749 | 5.82E-53 | -1.69E-46 |
MS.gene060803 | MS.gene066782 | 0.813894 | 2.03E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 132 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTTATATTGTAGTTATTT+TGG | 0.133678 | 5.2:+34530363 | None:intergenic |
CGTACAGATCCTTTCCTTTC+AGG | 0.145611 | 5.2:+34526915 | None:intergenic |
CTGATTGTGATTGGCCATTT+TGG | 0.150250 | 5.2:+34530201 | None:intergenic |
CTGATTGTGATTCATGATTT+TGG | 0.191362 | 5.2:+34530716 | None:intergenic |
GAAGATCTAATGTTGAAAAT+AGG | 0.200930 | 5.2:-34526851 | MS.gene066782:CDS |
CTCATTCTACTAACAGAATT+AGG | 0.227549 | 5.2:+34528477 | None:intergenic |
AGACTCAAGATTCTACAAAT+TGG | 0.229852 | 5.2:-34526968 | MS.gene066782:CDS |
CATTTATATTGTGGTTGTTT+TGG | 0.273564 | 5.2:+34529530 | None:intergenic |
GCTGAATATCCTATTTCTTT+TGG | 0.275592 | 5.2:-34530667 | MS.gene066782:CDS |
GAAGGATCAACTCTTCTATC+AGG | 0.283230 | 5.2:+34527860 | None:intergenic |
ATGAGTAAAAGATTACTTAA+AGG | 0.290210 | 5.2:-34530128 | MS.gene066782:intron |
CCTTAGAGCTATCAATTAAT+TGG | 0.301412 | 5.2:+34530393 | None:intergenic |
TTTGTTTGCTCGGTCAATTC+AGG | 0.306771 | 5.2:+34527992 | None:intergenic |
CCTATTCTACCAAAAGAAAT+AGG | 0.316688 | 5.2:+34530658 | None:intergenic |
AGATACAAGAGAGAATTTAA+TGG | 0.329508 | 5.2:-34530755 | MS.gene066782:CDS |
CGCATAAAGTTTAAAGCTGT+TGG | 0.334017 | 5.2:-34530957 | MS.gene066782:CDS |
ATTTCATACCTCCAACAAAT+TGG | 0.337165 | 5.2:+34529497 | None:intergenic |
TGTTTATACGATGGTCGTTT+TGG | 0.343578 | 5.2:+34530877 | None:intergenic |
GATACTTTAGGTAATCCTAT+AGG | 0.357677 | 5.2:-34528267 | MS.gene066782:CDS |
AAGATCTAATGTTGAAAATA+GGG | 0.362744 | 5.2:-34526850 | MS.gene066782:CDS |
TTAGGAGTACTTGGAGCATT+AGG | 0.369290 | 5.2:+34526642 | None:intergenic |
TAGTATTTGCTTTGTTTGCT+CGG | 0.376113 | 5.2:+34527982 | None:intergenic |
GCAAGTCTTAACCACCAAAA+TGG | 0.381151 | 5.2:-34530215 | MS.gene066782:CDS |
CACAAATTAGAAAATTTGCT+TGG | 0.382028 | 5.2:-34526825 | MS.gene066782:CDS |
TTTGTTGCTCTGATTGTGAT+TGG | 0.384046 | 5.2:+34528526 | None:intergenic |
CAACTACAAGTGACAGTGAT+TGG | 0.384275 | 5.2:-34526596 | MS.gene066782:CDS |
TTTCCAGCTTAGAATATTGA+TGG | 0.384605 | 5.2:+34528182 | None:intergenic |
GAGATGTACCTTTCCCTCCT+TGG | 0.385864 | 5.2:+34527805 | None:intergenic |
GATTGGTCACTTTGGAGATT+AGG | 0.387777 | 5.2:+34528543 | None:intergenic |
CCAATTAATTGATAGCTCTA+AGG | 0.389326 | 5.2:-34530393 | MS.gene066782:CDS |
GTGGAATCTCCTACTTCATT+TGG | 0.390695 | 5.2:-34530155 | MS.gene066782:CDS |
TTAGGTCAGAAGAGGGTAAG+AGG | 0.399034 | 5.2:-34528351 | MS.gene066782:intron |
GACTCAAGATTCTACAAATT+GGG | 0.408913 | 5.2:-34526967 | MS.gene066782:CDS |
CTGATTGTGATTGGTCACTT+TGG | 0.411868 | 5.2:+34528535 | None:intergenic |
CACACTCTTCATTTATATTG+TGG | 0.411989 | 5.2:+34529521 | None:intergenic |
GTACTTGTTCTGATTGTGAT+TGG | 0.412588 | 5.2:+34530192 | None:intergenic |
AGTGAAAAGTGTGCACAATC+TGG | 0.412679 | 5.2:-34530344 | MS.gene066782:CDS |
GTACAGATCCTTTCCTTTCA+GGG | 0.412708 | 5.2:+34526916 | None:intergenic |
TGTGTTGAAGTGGATACTTT+AGG | 0.418571 | 5.2:-34528279 | MS.gene066782:CDS |
GATTCCACACATCCGACATT+CGG | 0.422314 | 5.2:+34528322 | None:intergenic |
ACAAATTAGAAAATTTGCTT+GGG | 0.426732 | 5.2:-34526824 | MS.gene066782:CDS |
ATTCCACACATCCGACATTC+GGG | 0.431245 | 5.2:+34528323 | None:intergenic |
TCCTAATGATTTCTCTAGTA+AGG | 0.438496 | 5.2:-34526625 | MS.gene066782:CDS |
ATCGTGCTTTAGTACATCAT+TGG | 0.444149 | 5.2:-34527832 | MS.gene066782:CDS |
GAAGAGTGTGACCAATTTGT+TGG | 0.461216 | 5.2:-34529508 | MS.gene066782:CDS |
TGTTAGACAACTGAGGCTAA+TGG | 0.463813 | 5.2:-34527243 | MS.gene066782:intron |
ATACTTTAGGTAATCCTATA+GGG | 0.464522 | 5.2:-34528266 | MS.gene066782:CDS |
CAATCACTGTCACTTGTAGT+TGG | 0.466481 | 5.2:+34526597 | None:intergenic |
AAACAAGACCGAGGAAGAAA+TGG | 0.468253 | 5.2:-34527894 | MS.gene066782:CDS |
GGTTAAGACTTGCTACCATT+AGG | 0.476060 | 5.2:+34530225 | None:intergenic |
AGATTAGGACTTGCTACCAC+TGG | 0.479706 | 5.2:+34528558 | None:intergenic |
TAATATGTTTGAGTGGATAC+AGG | 0.480571 | 5.2:-34528136 | MS.gene066782:intron |
TTTAAATGCACTGGGCTGCT+TGG | 0.481978 | 5.2:-34528226 | MS.gene066782:CDS |
AATGAACCTTGGAAGACTCT+TGG | 0.485945 | 5.2:+34527652 | None:intergenic |
ATGCACTGGGCTGCTTGGTA+AGG | 0.487077 | 5.2:-34528221 | MS.gene066782:CDS |
CTCCCATCAATATTCTAAGC+TGG | 0.489833 | 5.2:-34528185 | MS.gene066782:CDS |
GCATAAAGTTTAAAGCTGTT+GGG | 0.491168 | 5.2:-34530956 | MS.gene066782:CDS |
GTAGGCAGCCATTTCTTCCT+CGG | 0.492642 | 5.2:+34527886 | None:intergenic |
GAGAAATCATTAGGAGTACT+TGG | 0.493266 | 5.2:+34526633 | None:intergenic |
TCCTTACTAGAGAAATCATT+AGG | 0.497003 | 5.2:+34526624 | None:intergenic |
TTTAAAGCTGTTGGGAAAGG+TGG | 0.498924 | 5.2:-34530948 | MS.gene066782:CDS |
AAAGGATCTGTACGTTGTCT+TGG | 0.502221 | 5.2:-34526906 | MS.gene066782:CDS |
AAACATGACTTGAAAGCAAA+GGG | 0.504754 | 5.2:-34527926 | MS.gene066782:CDS |
ATGAGTAAAAGTTTAACTAA+AGG | 0.511496 | 5.2:-34528459 | MS.gene066782:intron |
AACTACAAGTGACAGTGATT+GGG | 0.519314 | 5.2:-34526595 | MS.gene066782:CDS |
AACTCTTCTATCAGGGATGT+AGG | 0.523874 | 5.2:+34527868 | None:intergenic |
AGTACATCATTGGTGTTCCA+AGG | 0.525050 | 5.2:-34527822 | MS.gene066782:CDS |
ACACATATGAATTCTCCATC+TGG | 0.526107 | 5.2:+34528297 | None:intergenic |
ATATTAGTTATGTTCAACTC+TGG | 0.530902 | 5.2:+34528153 | None:intergenic |
GACGTATACTCAAGAGTAAG+AGG | 0.531396 | 5.2:-34526939 | MS.gene066782:CDS |
TCTTTATAGTATCTACAAGA+AGG | 0.533092 | 5.2:-34530250 | MS.gene066782:intron |
ATCTGTACGTTGTCTTGGCA+AGG | 0.533551 | 5.2:-34526901 | MS.gene066782:CDS |
CTCATTCTACCAAATGAAGT+AGG | 0.533963 | 5.2:+34530146 | None:intergenic |
ATCTACAAGAAGGAGCCTAA+TGG | 0.534443 | 5.2:-34530240 | MS.gene066782:CDS |
AAACTTTATGCGCCTCCCTA+CGG | 0.538836 | 5.2:+34530968 | None:intergenic |
AAATAAGTAACATCAACAAA+AGG | 0.542008 | 5.2:-34527712 | MS.gene066782:CDS |
AAGTTTAAAGCTGTTGGGAA+AGG | 0.542861 | 5.2:-34530951 | MS.gene066782:CDS |
ATACCAATGAGAGGAACAAA+AGG | 0.544428 | 5.2:-34529624 | MS.gene066782:CDS |
GAGACTCGTACTCGTAAAGA+TGG | 0.546024 | 5.2:-34527189 | MS.gene066782:CDS |
TTTGCAAGCTATAGCTCAAG+AGG | 0.547144 | 5.2:-34526745 | MS.gene066782:intron |
TTCCAGCTTAGAATATTGAT+GGG | 0.551263 | 5.2:+34528183 | None:intergenic |
TTGATTATGAATAGATACCA+TGG | 0.557943 | 5.2:-34530471 | MS.gene066782:intron |
TGATTATGAATAGATACCAT+GGG | 0.566356 | 5.2:-34530470 | MS.gene066782:intron |
TTGGTGTTCCAAGGAGGGAA+AGG | 0.567672 | 5.2:-34527813 | MS.gene066782:intron |
ACCACCTCGTGAATGAACCT+TGG | 0.574663 | 5.2:+34527641 | None:intergenic |
CATCATTGGTGTTCCAAGGA+GGG | 0.577846 | 5.2:-34527818 | MS.gene066782:CDS |
AAGTGTGCGCAACTTGGAGG+AGG | 0.578313 | 5.2:-34530852 | MS.gene066782:intron |
CAAGAGTAAGAGGCCCTGAA+AGG | 0.578582 | 5.2:-34526929 | MS.gene066782:CDS |
ACAATCAGAACAAGTACAAG+TGG | 0.580247 | 5.2:-34530186 | MS.gene066782:CDS |
AAGATAACTTGAGTGCTAAG+TGG | 0.581349 | 5.2:-34527958 | MS.gene066782:CDS |
CAAACATGACTTGAAAGCAA+AGG | 0.581593 | 5.2:-34527927 | MS.gene066782:CDS |
AGAATTCATATGTGTTGAAG+TGG | 0.585760 | 5.2:-34528289 | MS.gene066782:CDS |
AAGGATCAACTCTTCTATCA+GGG | 0.589458 | 5.2:+34527861 | None:intergenic |
CTTTAGGTAATCCTATAGGG+TGG | 0.596785 | 5.2:-34528263 | MS.gene066782:CDS |
TATCTATAATAGATACCGTA+GGG | 0.599957 | 5.2:-34530983 | None:intergenic |
ATCAGAACAGCAAATACAAG+TGG | 0.601681 | 5.2:-34530698 | MS.gene066782:CDS |
TACATGATTTAGGTCAGAAG+AGG | 0.603402 | 5.2:-34528359 | MS.gene066782:intron |
ATATAAATTTCAGCTCGTGA+AGG | 0.611763 | 5.2:+34527213 | None:intergenic |
AGTACAAGTGGGAAGTCATG+TGG | 0.612341 | 5.2:-34530174 | MS.gene066782:CDS |
AAGTGTGCACAATCTGGAGG+AGG | 0.613409 | 5.2:-34530338 | MS.gene066782:intron |
GTAAGAGGCCCTGAAAGGAA+AGG | 0.614183 | 5.2:-34526924 | MS.gene066782:CDS |
GGTAATCCTATAGGGTGGGA+AGG | 0.614249 | 5.2:-34528258 | MS.gene066782:CDS |
TTTAGGTAATCCTATAGGGT+GGG | 0.615133 | 5.2:-34528262 | MS.gene066782:CDS |
AAGGTTCCACGTCATTCAAG+TGG | 0.618564 | 5.2:-34526882 | MS.gene066782:CDS |
TTTCAAATGTTAGACAACTG+AGG | 0.623692 | 5.2:-34527250 | MS.gene066782:intron |
ACATAACTAATATGTTTGAG+TGG | 0.624672 | 5.2:-34528143 | MS.gene066782:CDS |
TGGCAGTATTGTGAATGAGA+AGG | 0.624743 | 5.2:-34527169 | MS.gene066782:CDS |
GAGTGTGACCAATTTGTTGG+AGG | 0.625460 | 5.2:-34529505 | MS.gene066782:intron |
TTATCTATAATAGATACCGT+AGG | 0.628158 | 5.2:-34530984 | None:intergenic |
ATAACTTGAGTGCTAAGTGG+AGG | 0.640182 | 5.2:-34527955 | MS.gene066782:CDS |
ATCAGAGCAACAAATACCAG+TGG | 0.644406 | 5.2:-34528517 | MS.gene066782:CDS |
GATGTGTGGAATCTACCAGA+TGG | 0.645034 | 5.2:-34528312 | MS.gene066782:CDS |
AAGAGGTTATACCCGAATGT+CGG | 0.647233 | 5.2:-34528334 | MS.gene066782:CDS |
ACATGATTTAGGTCAGAAGA+GGG | 0.648523 | 5.2:-34528358 | MS.gene066782:intron |
GAAAAGTGTGCACAATCTGG+AGG | 0.649034 | 5.2:-34530341 | MS.gene066782:CDS |
TGGGAACCAAGAGTCTTCCA+AGG | 0.650729 | 5.2:-34527658 | MS.gene066782:CDS |
ACTAAAGCACGATATTGAGA+AGG | 0.651661 | 5.2:+34527842 | None:intergenic |
GATGAACCACTTGAATGACG+TGG | 0.651820 | 5.2:+34526876 | None:intergenic |
CAATCAGAACAAGTACAAGT+GGG | 0.652631 | 5.2:-34530185 | MS.gene066782:CDS |
ATAGGTCAAAGTCTACCGAA+AGG | 0.655813 | 5.2:-34530640 | MS.gene066782:intron |
ATACCCGAATGTCGGATGTG+TGG | 0.657010 | 5.2:-34528326 | MS.gene066782:CDS |
TTCTTCATAGTAGATACAAG+AGG | 0.657110 | 5.2:-34528585 | MS.gene066782:intron |
ACATCATTGGTGTTCCAAGG+AGG | 0.660581 | 5.2:-34527819 | MS.gene066782:CDS |
TCTTCCAAGGTTCATTCACG+AGG | 0.670430 | 5.2:-34527645 | MS.gene066782:intron |
TCAGAACAGCAAATACAAGT+GGG | 0.674258 | 5.2:-34530697 | MS.gene066782:CDS |
AGATACAAGAGGAAATCCAG+TGG | 0.688047 | 5.2:-34528574 | MS.gene066782:CDS |
AAGGAATCGCTCAAAATACG+AGG | 0.691214 | 5.2:-34527693 | MS.gene066782:CDS |
CTATAATAGATACCGTAGGG+AGG | 0.692467 | 5.2:-34530980 | None:intergenic |
ATATGATAGATACCAATGAG+AGG | 0.701065 | 5.2:-34529633 | MS.gene066782:intron |
ATATGATGAAAACAAGACCG+AGG | 0.701687 | 5.2:-34527903 | MS.gene066782:CDS |
TATGAATAGATACCATGGGG+AGG | 0.703826 | 5.2:-34530466 | MS.gene066782:intron |
GATTATGAATAGATACCATG+GGG | 0.717244 | 5.2:-34530469 | MS.gene066782:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAGATAAAAAAATCA+AGG | + | chr5.2:34527041-34527060 | None:intergenic | 10.0% |
!!! | AATTATTTCTTAATATGAAT+GGG | - | chr5.2:34530271-34530290 | MS.gene066782:intron | 10.0% |
!!! | TAAAATTATGTAAGTAATTT+TGG | - | chr5.2:34527776-34527795 | MS.gene066782:intron | 10.0% |
!!! | TAATTATTTCTTAATATGAA+TGG | - | chr5.2:34530270-34530289 | MS.gene066782:intron | 10.0% |
!! | GTAGACATTAAAAAATAAAT+TGG | - | chr5.2:34527894-34527913 | MS.gene066782:CDS | 15.0% |
!! | TAATTGTACAAATTGTTAAA+GGG | - | chr5.2:34528357-34528376 | MS.gene066782:intron | 15.0% |
!! | TTAATTGTACAAATTGTTAA+AGG | - | chr5.2:34528356-34528375 | MS.gene066782:intron | 15.0% |
!!! | ATTTTTAAAAACGATTTTAG+AGG | + | chr5.2:34527683-34527702 | None:intergenic | 15.0% |
!!! | TTACTTTCTAAAAGAAAATT+TGG | + | chr5.2:34528532-34528551 | None:intergenic | 15.0% |
!! | AAAAGAAACTGTTATGATAT+AGG | + | chr5.2:34528914-34528933 | None:intergenic | 20.0% |
!! | AAAAGATTACTTAAAGGTAA+GGG | - | chr5.2:34527436-34527455 | MS.gene066782:intron | 20.0% |
!! | AAAGAGAAAATTTGAGAAAA+AGG | - | chr5.2:34528822-34528841 | MS.gene066782:intron | 20.0% |
!! | AAATAAGTAACATCAACAAA+AGG | - | chr5.2:34529846-34529865 | MS.gene066782:intron | 20.0% |
!! | AAGATCTAATGTTGAAAATA+GGG | - | chr5.2:34530708-34530727 | MS.gene066782:CDS | 20.0% |
!! | AATAAACCAATTGATAAACA+AGG | + | chr5.2:34527652-34527671 | None:intergenic | 20.0% |
!! | ATAACTTCTATATATAGTGA+AGG | + | chr5.2:34529791-34529810 | None:intergenic | 20.0% |
!! | ATGAGTAAAAGATTACTTAA+AGG | - | chr5.2:34527430-34527449 | MS.gene066782:intron | 20.0% |
!! | ATGAGTAAAAGTTTAACTAA+AGG | - | chr5.2:34529099-34529118 | MS.gene066782:intron | 20.0% |
!! | GTAAAAAATATTTATACACG+AGG | + | chr5.2:34527610-34527629 | None:intergenic | 20.0% |
!! | TAAAAGATTACTTAAAGGTA+AGG | - | chr5.2:34527435-34527454 | MS.gene066782:intron | 20.0% |
!! | TCTTCAAAAAGTTGAATTAT+AGG | + | chr5.2:34530847-34530866 | None:intergenic | 20.0% |
!! | TTAGAAAAAACAATACTCTT+GGG | + | chr5.2:34527759-34527778 | None:intergenic | 20.0% |
!! | TTATTACATGTGTATCATTT+AGG | - | chr5.2:34527801-34527820 | MS.gene066782:intron | 20.0% |
!! | TTGTTTATTACTGAAAAAGT+GGG | - | chr5.2:34530139-34530158 | MS.gene066782:CDS | 20.0% |
!! | TTTAAAAACACTATTCAAAC+AGG | + | chr5.2:34527462-34527481 | None:intergenic | 20.0% |
!! | TTTAGAAAAAACAATACTCT+TGG | + | chr5.2:34527760-34527779 | None:intergenic | 20.0% |
!! | TTTGTTAAAAATAAATGTGC+AGG | - | chr5.2:34526952-34526971 | MS.gene066782:CDS | 20.0% |
!! | TTTGTTTATTACTGAAAAAG+TGG | - | chr5.2:34530138-34530157 | MS.gene066782:CDS | 20.0% |
!!! | AAAAAACTTTTAAATGCACT+GGG | - | chr5.2:34529324-34529343 | MS.gene066782:intron | 20.0% |
!!! | ACAAATTAGAAAATTTGCTT+GGG | - | chr5.2:34530734-34530753 | MS.gene066782:CDS | 20.0% |
!!! | AGTGTAAATTGATTTATGTT+TGG | - | chr5.2:34528209-34528228 | MS.gene066782:CDS | 20.0% |
!!! | AGTTTTTAAAATGATGAAAC+AGG | + | chr5.2:34527567-34527586 | None:intergenic | 20.0% |
!!! | CACTTATATTGTAGTTATTT+TGG | + | chr5.2:34527198-34527217 | None:intergenic | 20.0% |
!!! | GAAAAAATTAAAGTCCATTT+TGG | + | chr5.2:34528316-34528335 | None:intergenic | 20.0% |
!!! | GTTACTTATTTTCTTTAACA+TGG | + | chr5.2:34529837-34529856 | None:intergenic | 20.0% |
!!! | GTTTGAATTAAAATTGCTTT+TGG | - | chr5.2:34528279-34528298 | MS.gene066782:CDS | 20.0% |
!!! | TAAAAAACTTTTAAATGCAC+TGG | - | chr5.2:34529323-34529342 | MS.gene066782:intron | 20.0% |
!!! | TATTTTTTAATGTCTACAAG+TGG | + | chr5.2:34527891-34527910 | None:intergenic | 20.0% |
!!! | TTATTTCCTTGTTTATCAAT+TGG | - | chr5.2:34527643-34527662 | MS.gene066782:intron | 20.0% |
!!! | TTGTAAGAATTTGAATTTTC+AGG | - | chr5.2:34530424-34530443 | MS.gene066782:CDS | 20.0% |
!!! | TTTGTCTTATATTTTGTGTA+GGG | - | chr5.2:34530517-34530536 | MS.gene066782:intron | 20.0% |
!!! | TTTTGTCTTATATTTTGTGT+AGG | - | chr5.2:34530516-34530535 | MS.gene066782:intron | 20.0% |
! | AAACATAAAATGTGTACAAC+AGG | + | chr5.2:34530120-34530139 | None:intergenic | 25.0% |
! | AACATAAAATGTGTACAACA+GGG | + | chr5.2:34530119-34530138 | None:intergenic | 25.0% |
! | AACTGTTATGATATAGGATA+AGG | + | chr5.2:34528908-34528927 | None:intergenic | 25.0% |
! | AAGAAGAAAATCTGATGAAA+TGG | - | chr5.2:34527514-34527533 | MS.gene066782:intron | 25.0% |
! | ACATAACTAATATGTTTGAG+TGG | - | chr5.2:34529415-34529434 | MS.gene066782:intron | 25.0% |
! | AGATACAAGAGAGAATTTAA+TGG | - | chr5.2:34526803-34526822 | MS.gene066782:CDS | 25.0% |
! | ATACTTTAGGTAATCCTATA+GGG | - | chr5.2:34529292-34529311 | MS.gene066782:intron | 25.0% |
! | ATATTAGTTATGTTCAACTC+TGG | + | chr5.2:34529408-34529427 | None:intergenic | 25.0% |
! | GAAGATCTAATGTTGAAAAT+AGG | - | chr5.2:34530707-34530726 | MS.gene066782:CDS | 25.0% |
! | GAATTCAAAATCAAAAAGCA+TGG | + | chr5.2:34527290-34527309 | None:intergenic | 25.0% |
! | GATTATGATGATTTACACTT+AGG | - | chr5.2:34530891-34530910 | MS.gene066782:CDS | 25.0% |
! | TAGAAAAAACAATACTCTTG+GGG | + | chr5.2:34527758-34527777 | None:intergenic | 25.0% |
! | TCTTATCAATTCATGTTGTT+TGG | - | chr5.2:34528253-34528272 | MS.gene066782:CDS | 25.0% |
! | TCTTTATAGTATCTACAAGA+AGG | - | chr5.2:34527308-34527327 | MS.gene066782:intron | 25.0% |
! | TGATTATGAATAGATACCAT+GGG | - | chr5.2:34527088-34527107 | MS.gene066782:intron | 25.0% |
! | TGTTTACCTATGTATCATTT+AGG | - | chr5.2:34526987-34527006 | MS.gene066782:CDS | 25.0% |
! | TTGATTATGAATAGATACCA+TGG | - | chr5.2:34527087-34527106 | MS.gene066782:intron | 25.0% |
! | TTGGTGTAAATATATATGCT+TGG | + | chr5.2:34528513-34528532 | None:intergenic | 25.0% |
!! | AGGAAATAAAAAAACTTGCT+TGG | + | chr5.2:34527632-34527651 | None:intergenic | 25.0% |
!! | CAAGCAAATTTTCTAATTTG+TGG | + | chr5.2:34530735-34530754 | None:intergenic | 25.0% |
!! | CACAAATTAGAAAATTTGCT+TGG | - | chr5.2:34530733-34530752 | MS.gene066782:CDS | 25.0% |
!! | CATTTATATTGTGGTTGTTT+TGG | + | chr5.2:34528031-34528050 | None:intergenic | 25.0% |
!! | TGAATTAAAAAAGCATATGG+TGG | - | chr5.2:34530540-34530559 | MS.gene066782:intron | 25.0% |
!! | TGATTTTTGATAGAACACTA+TGG | + | chr5.2:34530031-34530050 | None:intergenic | 25.0% |
!! | TTTTGTTAGGAAATAGGATA+AGG | - | chr5.2:34528099-34528118 | MS.gene066782:intron | 25.0% |
AAACATGACTTGAAAGCAAA+GGG | - | chr5.2:34529632-34529651 | MS.gene066782:intron | 30.0% | |
AAACCATACATCATATGCAA+AGG | + | chr5.2:34529164-34529183 | None:intergenic | 30.0% | |
ACCAAACCTAAATGATACAT+AGG | + | chr5.2:34526996-34527015 | None:intergenic | 30.0% | |
AGAATTCATATGTGTTGAAG+TGG | - | chr5.2:34529269-34529288 | MS.gene066782:intron | 30.0% | |
AGACTCAAGATTCTACAAAT+TGG | - | chr5.2:34530590-34530609 | MS.gene066782:intron | 30.0% | |
ATAAGGATTAAGTGTGTGTT+TGG | - | chr5.2:34528116-34528135 | MS.gene066782:intron | 30.0% | |
ATACCTTTGCATATGATGTA+TGG | - | chr5.2:34529158-34529177 | MS.gene066782:intron | 30.0% | |
ATATAAATTTCAGCTCGTGA+AGG | + | chr5.2:34530348-34530367 | None:intergenic | 30.0% | |
ATATGATAGATACCAATGAG+AGG | - | chr5.2:34527925-34527944 | MS.gene066782:CDS | 30.0% | |
ATTCTCGTGATTTAATCAAC+AGG | + | chr5.2:34528667-34528686 | None:intergenic | 30.0% | |
ATTTCATACCTCCAACAAAT+TGG | + | chr5.2:34528064-34528083 | None:intergenic | 30.0% | |
CAATCAATAGCTTCAATCAT+CGG | + | chr5.2:34530464-34530483 | None:intergenic | 30.0% | |
CACACTCTTCATTTATATTG+TGG | + | chr5.2:34528040-34528059 | None:intergenic | 30.0% | |
CCTATTCTACCAAAAGAAAT+AGG | + | chr5.2:34526903-34526922 | None:intergenic | 30.0% | |
CCTTAGAGCTATCAATTAAT+TGG | + | chr5.2:34527168-34527187 | None:intergenic | 30.0% | |
CTCATTCTACTAACAGAATT+AGG | + | chr5.2:34529084-34529103 | None:intergenic | 30.0% | |
GACTCAAGATTCTACAAATT+GGG | - | chr5.2:34530591-34530610 | MS.gene066782:intron | 30.0% | |
GATACTTTAGGTAATCCTAT+AGG | - | chr5.2:34529291-34529310 | MS.gene066782:intron | 30.0% | |
GATTATGAATAGATACCATG+GGG | - | chr5.2:34527089-34527108 | MS.gene066782:intron | 30.0% | |
GGTTAAGAAAGTGAAAATGT+TGG | - | chr5.2:34528843-34528862 | MS.gene066782:intron | 30.0% | |
TAATATGTTTGAGTGGATAC+AGG | - | chr5.2:34529422-34529441 | MS.gene066782:intron | 30.0% | |
TCCTAATGATTTCTCTAGTA+AGG | - | chr5.2:34530933-34530952 | MS.gene066782:CDS | 30.0% | |
TCCTTACTAGAGAAATCATT+AGG | + | chr5.2:34530937-34530956 | None:intergenic | 30.0% | |
TCGTAAGACATACAGTAAAA+AGG | + | chr5.2:34529493-34529512 | None:intergenic | 30.0% | |
TGGATGTGAAATTACCAAAA+TGG | - | chr5.2:34528299-34528318 | MS.gene066782:CDS | 30.0% | |
TTCCAGCTTAGAATATTGAT+GGG | + | chr5.2:34529378-34529397 | None:intergenic | 30.0% | |
TTCTCGTGATTTAATCAACA+GGG | + | chr5.2:34528666-34528685 | None:intergenic | 30.0% | |
TTCTTCATAGTAGATACAAG+AGG | - | chr5.2:34528973-34528992 | MS.gene066782:intron | 30.0% | |
TTGAATGCTGTTAGAAAAAG+TGG | - | chr5.2:34527124-34527143 | MS.gene066782:intron | 30.0% | |
TTTCAAATGTTAGACAACTG+AGG | - | chr5.2:34530308-34530327 | MS.gene066782:intron | 30.0% | |
TTTCCAGCTTAGAATATTGA+TGG | + | chr5.2:34529379-34529398 | None:intergenic | 30.0% | |
! | AAAAAGCATGGAACTTCAAA+AGG | + | chr5.2:34527278-34527297 | None:intergenic | 30.0% |
! | AAGCATTTAACGTGATTTTG+GGG | + | chr5.2:34528485-34528504 | None:intergenic | 30.0% |
! | ACCTATGTATCATTTAGGTT+TGG | - | chr5.2:34526992-34527011 | MS.gene066782:CDS | 30.0% |
! | AGAGAACTAGTTTATGGATT+TGG | - | chr5.2:34528756-34528775 | MS.gene066782:intron | 30.0% |
! | ATTAAAAAAGCATATGGTGG+AGG | - | chr5.2:34530543-34530562 | MS.gene066782:intron | 30.0% |
! | CAAGCATTTAACGTGATTTT+GGG | + | chr5.2:34528486-34528505 | None:intergenic | 30.0% |
! | CCAATTAATTGATAGCTCTA+AGG | - | chr5.2:34527165-34527184 | MS.gene066782:CDS | 30.0% |
! | CTCAGTTTTTGTTAGGAAAT+AGG | - | chr5.2:34528093-34528112 | MS.gene066782:intron | 30.0% |
! | CTGATTGTGATTCATGATTT+TGG | + | chr5.2:34526845-34526864 | None:intergenic | 30.0% |
! | GAATTGATTCCAAGCATTTA+TGG | + | chr5.2:34528411-34528430 | None:intergenic | 30.0% |
! | GCATAAAGTTTAAAGCTGTT+GGG | - | chr5.2:34526602-34526621 | MS.gene066782:CDS | 30.0% |
! | GGGTGAATTAAAAAAGCATA+TGG | - | chr5.2:34530537-34530556 | MS.gene066782:intron | 30.0% |
! | TCAAGCATTTAACGTGATTT+TGG | + | chr5.2:34528487-34528506 | None:intergenic | 30.0% |
! | TTGTTTGCTCAGTTTTTGTT+AGG | - | chr5.2:34528086-34528105 | MS.gene066782:intron | 30.0% |
!! | CACACTTTTTGTTTATACGA+TGG | + | chr5.2:34526693-34526712 | None:intergenic | 30.0% |
!! | CCTATTTCTTTTGGTAGAAT+AGG | - | chr5.2:34526900-34526919 | MS.gene066782:CDS | 30.0% |
!! | GCTGAATATCCTATTTCTTT+TGG | - | chr5.2:34526891-34526910 | MS.gene066782:CDS | 30.0% |
!! | TAGTATTTGCTTTGTTTGCT+CGG | + | chr5.2:34529579-34529598 | None:intergenic | 30.0% |
!! | TCACACTCATTTTTCTTTGT+TGG | + | chr5.2:34528789-34528808 | None:intergenic | 30.0% |
!! | TTTGATTGTGTTTTGGACTT+TGG | + | chr5.2:34527731-34527750 | None:intergenic | 30.0% |
AACTACAAGTGACAGTGATT+GGG | - | chr5.2:34530963-34530982 | MS.gene066782:CDS | 35.0% | |
AAGATAACTTGAGTGCTAAG+TGG | - | chr5.2:34529600-34529619 | MS.gene066782:CDS | 35.0% | |
AAGGATCAACTCTTCTATCA+GGG | + | chr5.2:34529700-34529719 | None:intergenic | 35.0% | |
AAGGTAGTGATTGACTAGAT+AGG | + | chr5.2:34528626-34528645 | None:intergenic | 35.0% | |
ACAATCAGAACAAGTACAAG+TGG | - | chr5.2:34527372-34527391 | MS.gene066782:intron | 35.0% | |
ACACATATGAATTCTCCATC+TGG | + | chr5.2:34529264-34529283 | None:intergenic | 35.0% | |
ACATGATTTAGGTCAGAAGA+GGG | - | chr5.2:34529200-34529219 | MS.gene066782:intron | 35.0% | |
ACTAAAGCACGATATTGAGA+AGG | + | chr5.2:34529719-34529738 | None:intergenic | 35.0% | |
AGAAAGTGAAAATGTTGGAG+AGG | - | chr5.2:34528848-34528867 | MS.gene066782:intron | 35.0% | |
ATACCAATGAGAGGAACAAA+AGG | - | chr5.2:34527934-34527953 | MS.gene066782:CDS | 35.0% | |
ATATGATGAAAACAAGACCG+AGG | - | chr5.2:34529655-34529674 | MS.gene066782:intron | 35.0% | |
ATCAACAGGGTTCTGTATAT+AGG | + | chr5.2:34528653-34528672 | None:intergenic | 35.0% | |
ATCAGAACAGCAAATACAAG+TGG | - | chr5.2:34526860-34526879 | MS.gene066782:CDS | 35.0% | |
ATCGTGCTTTAGTACATCAT+TGG | - | chr5.2:34529726-34529745 | MS.gene066782:intron | 35.0% | |
CAAACACTACACTTACCTTT+CGG | + | chr5.2:34526936-34526955 | None:intergenic | 35.0% | |
CAAACATGACTTGAAAGCAA+AGG | - | chr5.2:34529631-34529650 | MS.gene066782:intron | 35.0% | |
CAAAGAAAAATGAGTGTGAG+AGG | - | chr5.2:34528790-34528809 | MS.gene066782:intron | 35.0% | |
CAATCAGAACAAGTACAAGT+GGG | - | chr5.2:34527373-34527392 | MS.gene066782:intron | 35.0% | |
CGAATGTTGTTCGAAAAAGT+GGG | - | chr5.2:34527958-34527977 | MS.gene066782:CDS | 35.0% | |
CTCATTCTACCAAATGAAGT+AGG | + | chr5.2:34527415-34527434 | None:intergenic | 35.0% | |
CTTCTGACCTAAATCATGTA+TGG | + | chr5.2:34529199-34529218 | None:intergenic | 35.0% | |
GAAAGTGAAAATGTTGGAGA+GGG | - | chr5.2:34528849-34528868 | MS.gene066782:intron | 35.0% | |
GGTTCTGTATATAGGGATAA+AGG | + | chr5.2:34528645-34528664 | None:intergenic | 35.0% | |
GTACTTGTTCTGATTGTGAT+TGG | + | chr5.2:34527369-34527388 | None:intergenic | 35.0% | |
GTGACATCCATACATGATTT+AGG | - | chr5.2:34529189-34529208 | MS.gene066782:intron | 35.0% | |
TACATGATTTAGGTCAGAAG+AGG | - | chr5.2:34529199-34529218 | MS.gene066782:intron | 35.0% | |
TCAACAGGGTTCTGTATATA+GGG | + | chr5.2:34528652-34528671 | None:intergenic | 35.0% | |
TCAGAACAGCAAATACAAGT+GGG | - | chr5.2:34526861-34526880 | MS.gene066782:CDS | 35.0% | |
TGTGTTGAAGTGGATACTTT+AGG | - | chr5.2:34529279-34529298 | MS.gene066782:intron | 35.0% | |
TTTAGGTAATCCTATAGGGT+GGG | - | chr5.2:34529296-34529315 | MS.gene066782:intron | 35.0% | |
TTTGTTGCTCTGATTGTGAT+TGG | + | chr5.2:34529035-34529054 | None:intergenic | 35.0% | |
! | AAGTTTAAAGCTGTTGGGAA+AGG | - | chr5.2:34526607-34526626 | MS.gene066782:CDS | 35.0% |
! | AGCATTTAACGTGATTTTGG+GGG | + | chr5.2:34528484-34528503 | None:intergenic | 35.0% |
! | ATACGAGGATTTTCATTGCA+TGG | - | chr5.2:34529880-34529899 | MS.gene066782:intron | 35.0% |
! | CGCATAAAGTTTAAAGCTGT+TGG | - | chr5.2:34526601-34526620 | MS.gene066782:CDS | 35.0% |
! | GTTTCAACATGATTTTCCAC+TGG | + | chr5.2:34529060-34529079 | None:intergenic | 35.0% |
! | TACGAGGATTTTCATTGCAT+GGG | - | chr5.2:34529881-34529900 | MS.gene066782:intron | 35.0% |
! | TGTTTATACGATGGTCGTTT+TGG | + | chr5.2:34526684-34526703 | None:intergenic | 35.0% |
!! | ACTTTTGATTGCACTCTTCA+TGG | + | chr5.2:34530218-34530237 | None:intergenic | 35.0% |
!! | CTCATTTTTCTTTGTTGGAG+AGG | + | chr5.2:34528784-34528803 | None:intergenic | 35.0% |
!! | GAGAAATCATTAGGAGTACT+TGG | + | chr5.2:34530928-34530947 | None:intergenic | 35.0% |
!! | GATTCATGATTTTGGTGACA+TGG | + | chr5.2:34526837-34526856 | None:intergenic | 35.0% |
!!! | CCACTTTTTCGAACAACATT+CGG | + | chr5.2:34527960-34527979 | None:intergenic | 35.0% |
AAACAAGACCGAGGAAGAAA+TGG | - | chr5.2:34529664-34529683 | MS.gene066782:intron | 40.0% | |
AAAGGATCTGTACGTTGTCT+TGG | - | chr5.2:34530652-34530671 | MS.gene066782:CDS | 40.0% | |
AACTCTTCTATCAGGGATGT+AGG | + | chr5.2:34529693-34529712 | None:intergenic | 40.0% | |
AAGAGGTTATACCCGAATGT+CGG | - | chr5.2:34529224-34529243 | MS.gene066782:intron | 40.0% | |
AAGGAATCGCTCAAAATACG+AGG | - | chr5.2:34529865-34529884 | MS.gene066782:intron | 40.0% | |
AATGAACCTTGGAAGACTCT+TGG | + | chr5.2:34529909-34529928 | None:intergenic | 40.0% | |
AGATACAAGAGGAAATCCAG+TGG | - | chr5.2:34528984-34529003 | MS.gene066782:intron | 40.0% | |
AGTGTAGCACCATAAATGCT+TGG | - | chr5.2:34528399-34528418 | MS.gene066782:intron | 40.0% | |
ATAACTTGAGTGCTAAGTGG+AGG | - | chr5.2:34529603-34529622 | MS.gene066782:CDS | 40.0% | |
ATAGGTCAAAGTCTACCGAA+AGG | - | chr5.2:34526918-34526937 | MS.gene066782:CDS | 40.0% | |
ATCAGAGCAACAAATACCAG+TGG | - | chr5.2:34529041-34529060 | MS.gene066782:intron | 40.0% | |
ATCTACAAGAAGGAGCCTAA+TGG | - | chr5.2:34527318-34527337 | MS.gene066782:intron | 40.0% | |
CAACTACAAGTGACAGTGAT+TGG | - | chr5.2:34530962-34530981 | MS.gene066782:CDS | 40.0% | |
CCGAATGTTGTTCGAAAAAG+TGG | - | chr5.2:34527957-34527976 | MS.gene066782:CDS | 40.0% | |
CGAGAGAAGTTTCATTGTAG+AGG | - | chr5.2:34528874-34528893 | MS.gene066782:intron | 40.0% | |
CTCCCATCAATATTCTAAGC+TGG | - | chr5.2:34529373-34529392 | MS.gene066782:intron | 40.0% | |
CTTTAGGTAATCCTATAGGG+TGG | - | chr5.2:34529295-34529314 | MS.gene066782:intron | 40.0% | |
GAAGGATCAACTCTTCTATC+AGG | + | chr5.2:34529701-34529720 | None:intergenic | 40.0% | |
GACGTATACTCAAGAGTAAG+AGG | - | chr5.2:34530619-34530638 | MS.gene066782:intron | 40.0% | |
GCAAGTCTTAACCACCAAAA+TGG | - | chr5.2:34527343-34527362 | MS.gene066782:intron | 40.0% | |
GTACAGATCCTTTCCTTTCA+GGG | + | chr5.2:34530645-34530664 | None:intergenic | 40.0% | |
GTGGAATCTCCTACTTCATT+TGG | - | chr5.2:34527403-34527422 | MS.gene066782:intron | 40.0% | |
GTTCTACAAGCTTACCATTC+AGG | - | chr5.2:34528731-34528750 | MS.gene066782:intron | 40.0% | |
TAAGTGTGTGTTTGGTTGTG+CGG | - | chr5.2:34528124-34528143 | MS.gene066782:intron | 40.0% | |
TAGAAAAAGTGGCAAAGCAC+AGG | - | chr5.2:34527135-34527154 | MS.gene066782:intron | 40.0% | |
TATGAATAGATACCATGGGG+AGG | - | chr5.2:34527092-34527111 | MS.gene066782:intron | 40.0% | |
TGGCAGTATTGTGAATGAGA+AGG | - | chr5.2:34530389-34530408 | MS.gene066782:CDS | 40.0% | |
TGTTAGACAACTGAGGCTAA+TGG | - | chr5.2:34530315-34530334 | MS.gene066782:intron | 40.0% | |
TTTGCAAGCTATAGCTCAAG+AGG | - | chr5.2:34530813-34530832 | MS.gene066782:intron | 40.0% | |
TTTGTTTGCTCGGTCAATTC+AGG | + | chr5.2:34529569-34529588 | None:intergenic | 40.0% | |
! | AACAAAAAGTGTGCGCAACT+TGG | - | chr5.2:34526700-34526719 | MS.gene066782:intron | 40.0% |
! | AACTAGTTCTCTCTCCTGAA+TGG | + | chr5.2:34528748-34528767 | None:intergenic | 40.0% |
! | AGTACATCATTGGTGTTCCA+AGG | - | chr5.2:34529736-34529755 | MS.gene066782:intron | 40.0% |
! | AGTGAAAAGTGTGCACAATC+TGG | - | chr5.2:34527214-34527233 | MS.gene066782:CDS | 40.0% |
! | CAATCACTGTCACTTGTAGT+TGG | + | chr5.2:34530964-34530983 | None:intergenic | 40.0% |
! | CAGGAGAGAGAACTAGTTTA+TGG | - | chr5.2:34528750-34528769 | MS.gene066782:intron | 40.0% |
! | CTGATTGTGATTGGTCACTT+TGG | + | chr5.2:34529026-34529045 | None:intergenic | 40.0% |
! | GAAGAGTGTGACCAATTTGT+TGG | - | chr5.2:34528050-34528069 | MS.gene066782:intron | 40.0% |
! | GATTGGTCACTTTGGAGATT+AGG | + | chr5.2:34529018-34529037 | None:intergenic | 40.0% |
! | TTTAAAGCTGTTGGGAAAGG+TGG | - | chr5.2:34526610-34526629 | MS.gene066782:CDS | 40.0% |
! | TTTTTACCTTCCCACCCTAT+AGG | + | chr5.2:34529309-34529328 | None:intergenic | 40.0% |
!! | ATTGTGATTGGCCATTTTGG+TGG | + | chr5.2:34527357-34527376 | None:intergenic | 40.0% |
!! | CTGATTGTGATTGGCCATTT+TGG | + | chr5.2:34527360-34527379 | None:intergenic | 40.0% |
!! | GCTTCAGCTTGAATCGATTT+TGG | - | chr5.2:34528458-34528477 | MS.gene066782:intron | 40.0% |
!! | GGGCTTGTTTGATTGTGTTT+TGG | + | chr5.2:34527738-34527757 | None:intergenic | 40.0% |
!! | GGTTAAGACTTGCTACCATT+AGG | + | chr5.2:34527336-34527355 | None:intergenic | 40.0% |
!! | TTAGGAGTACTTGGAGCATT+AGG | + | chr5.2:34530919-34530938 | None:intergenic | 40.0% |
AAACTTTATGCGCCTCCCTA+CGG | + | chr5.2:34526593-34526612 | None:intergenic | 45.0% | |
AAGGTTCCACGTCATTCAAG+TGG | - | chr5.2:34530676-34530695 | MS.gene066782:CDS | 45.0% | |
AGTACAAGTGGGAAGTCATG+TGG | - | chr5.2:34527384-34527403 | MS.gene066782:intron | 45.0% | |
ATCTGTACGTTGTCTTGGCA+AGG | - | chr5.2:34530657-34530676 | MS.gene066782:CDS | 45.0% | |
ATTCCACACATCCGACATTC+GGG | + | chr5.2:34529238-34529257 | None:intergenic | 45.0% | |
CGTACAGATCCTTTCCTTTC+AGG | + | chr5.2:34530646-34530665 | None:intergenic | 45.0% | |
GAGACTCGTACTCGTAAAGA+TGG | - | chr5.2:34530369-34530388 | MS.gene066782:CDS | 45.0% | |
GATGAACCACTTGAATGACG+TGG | + | chr5.2:34530685-34530704 | None:intergenic | 45.0% | |
GATGTGTGGAATCTACCAGA+TGG | - | chr5.2:34529246-34529265 | MS.gene066782:intron | 45.0% | |
GATTCCACACATCCGACATT+CGG | + | chr5.2:34529239-34529258 | None:intergenic | 45.0% | |
TCTTCCAAGGTTCATTCACG+AGG | - | chr5.2:34529913-34529932 | MS.gene066782:intron | 45.0% | |
TTAGGTCAGAAGAGGGTAAG+AGG | - | chr5.2:34529207-34529226 | MS.gene066782:intron | 45.0% | |
TTTAAATGCACTGGGCTGCT+TGG | - | chr5.2:34529332-34529351 | MS.gene066782:intron | 45.0% | |
! | AAAAAGTGTGCGCAACTTGG+AGG | - | chr5.2:34526703-34526722 | MS.gene066782:intron | 45.0% |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.2:34529982-34530001 | MS.gene066782:intron | 45.0% |
! | AAGGCTTGGTTGTTGTTGAC+AGG | + | chr5.2:34529969-34529988 | None:intergenic | 45.0% |
! | ACATCATTGGTGTTCCAAGG+AGG | - | chr5.2:34529739-34529758 | MS.gene066782:intron | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.2:34529981-34530000 | MS.gene066782:intron | 45.0% |
! | CAATCTTTTGTACCTCCCCA+TGG | + | chr5.2:34527107-34527126 | None:intergenic | 45.0% |
! | CATCATTGGTGTTCCAAGGA+GGG | - | chr5.2:34529740-34529759 | MS.gene066782:intron | 45.0% |
! | GAAAAGTGTGCACAATCTGG+AGG | - | chr5.2:34527217-34527236 | MS.gene066782:CDS | 45.0% |
!! | AGATTAGGACTTGCTACCAC+TGG | + | chr5.2:34529003-34529022 | None:intergenic | 45.0% |
!! | GAGTGTGACCAATTTGTTGG+AGG | - | chr5.2:34528053-34528072 | MS.gene066782:intron | 45.0% |
!! | AAAGATAAAAAAAAAAATTA+TGG | + | chr5.2:34527864-34527883 | None:intergenic | 5.0% |
!!! | ATTTTTTAATTTTTTACAAT+TGG | + | chr5.2:34527064-34527083 | None:intergenic | 5.0% |
AAGTGTGCACAATCTGGAGG+AGG | - | chr5.2:34527220-34527239 | MS.gene066782:CDS | 50.0% | |
ACCACCTCGTGAATGAACCT+TGG | + | chr5.2:34529920-34529939 | None:intergenic | 50.0% | |
ATACCCGAATGTCGGATGTG+TGG | - | chr5.2:34529232-34529251 | MS.gene066782:intron | 50.0% | |
CAAGAGTAAGAGGCCCTGAA+AGG | - | chr5.2:34530629-34530648 | MS.gene066782:intron | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | + | chr5.2:34529983-34530002 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr5.2:34529986-34530005 | MS.gene066782:intron | 50.0% | |
GAGATGTACCTTTCCCTCCT+TGG | + | chr5.2:34529756-34529775 | None:intergenic | 50.0% | |
GGTAATCCTATAGGGTGGGA+AGG | - | chr5.2:34529300-34529319 | MS.gene066782:intron | 50.0% | |
GTAAGAGGCCCTGAAAGGAA+AGG | - | chr5.2:34530634-34530653 | MS.gene066782:intron | 50.0% | |
GTAGGCAGCCATTTCTTCCT+CGG | + | chr5.2:34529675-34529694 | None:intergenic | 50.0% | |
TCCAAGGTTCATTCACGAGG+TGG | - | chr5.2:34529916-34529935 | MS.gene066782:intron | 50.0% | |
TGGGAACCAAGAGTCTTCCA+AGG | - | chr5.2:34529900-34529919 | MS.gene066782:intron | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.2:34529980-34529999 | MS.gene066782:intron | 50.0% |
! | CGGCCTTTTGTTCCTCTCAT+TGG | + | chr5.2:34527940-34527959 | None:intergenic | 50.0% |
! | TTGGTGTTCCAAGGAGGGAA+AGG | - | chr5.2:34529745-34529764 | MS.gene066782:intron | 50.0% |
AAGTGTGCGCAACTTGGAGG+AGG | - | chr5.2:34526706-34526725 | MS.gene066782:intron | 55.0% | |
ATGCACTGGGCTGCTTGGTA+AGG | - | chr5.2:34529337-34529356 | MS.gene066782:intron | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr5.2:34529995-34530014 | None:intergenic | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr5.2:34529988-34530007 | None:intergenic | 55.0% | |
GTGTGTGTTTGGTTGTGCGG+TGG | - | chr5.2:34528127-34528146 | MS.gene066782:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr5.2:34529994-34530013 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 34526587 | 34530993 | 34526587 | ID=MS.gene066782 |
chr5.2 | mRNA | 34526587 | 34530993 | 34526587 | ID=MS.gene066782.t1;Parent=MS.gene066782 |
chr5.2 | exon | 34530853 | 34530993 | 34530853 | ID=MS.gene066782.t1.exon1;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34530853 | 34530993 | 34530853 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34530641 | 34530775 | 34530641 | ID=MS.gene066782.t1.exon2;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34530641 | 34530775 | 34530641 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34530339 | 34530479 | 34530339 | ID=MS.gene066782.t1.exon3;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34530339 | 34530479 | 34530339 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34530129 | 34530263 | 34530129 | ID=MS.gene066782.t1.exon4;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34530129 | 34530263 | 34530129 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34529506 | 34529646 | 34529506 | ID=MS.gene066782.t1.exon5;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34529506 | 34529646 | 34529506 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34528460 | 34528594 | 34528460 | ID=MS.gene066782.t1.exon6;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34528460 | 34528594 | 34528460 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34528137 | 34528369 | 34528137 | ID=MS.gene066782.t1.exon7;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34528137 | 34528369 | 34528137 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34527814 | 34528032 | 34527814 | ID=MS.gene066782.t1.exon8;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34527814 | 34528032 | 34527814 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34527646 | 34527735 | 34527646 | ID=MS.gene066782.t1.exon9;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34527646 | 34527735 | 34527646 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34527155 | 34527259 | 34527155 | ID=MS.gene066782.t1.exon10;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34527155 | 34527259 | 34527155 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34526746 | 34527042 | 34526746 | ID=MS.gene066782.t1.exon11;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34526746 | 34527042 | 34526746 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
chr5.2 | exon | 34526587 | 34526667 | 34526587 | ID=MS.gene066782.t1.exon12;Parent=MS.gene066782.t1 |
chr5.2 | CDS | 34526587 | 34526667 | 34526587 | ID=cds.MS.gene066782.t1;Parent=MS.gene066782.t1 |
Gene Sequence |
Protein sequence |