Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09873.t1 | KCW52694.1 | 100 | 103 | 0 | 0 | 1 | 103 | 4 | 106 | 7.50E-48 | 199.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09873.t1 | P62785 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 1.8e-50 | 199.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09873.t1 | M5VRN0 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 5.4e-48 | 199.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene09873 | 0.831204 | 1.91E-55 | -1.69E-46 |
MS.gene049159 | MS.gene09873 | 0.823963 | 1.04E-53 | -1.69E-46 |
MS.gene049255 | MS.gene09873 | 0.833229 | 6.01E-56 | -1.69E-46 |
MS.gene049341 | MS.gene09873 | 0.829314 | 5.52E-55 | -1.69E-46 |
MS.gene049350 | MS.gene09873 | 0.82145 | 4.01E-53 | -1.69E-46 |
MS.gene049368 | MS.gene09873 | 0.802257 | 6.11E-49 | -1.69E-46 |
MS.gene049672 | MS.gene09873 | 0.803998 | 2.67E-49 | -1.69E-46 |
MS.gene049807 | MS.gene09873 | 0.802186 | 6.32E-49 | -1.69E-46 |
MS.gene049821 | MS.gene09873 | 0.874033 | 9.26E-68 | -1.69E-46 |
MS.gene049850 | MS.gene09873 | 0.82577 | 3.91E-54 | -1.69E-46 |
MS.gene049873 | MS.gene09873 | 0.810978 | 8.81E-51 | -1.69E-46 |
MS.gene050020 | MS.gene09873 | 0.831711 | 1.43E-55 | -1.69E-46 |
MS.gene05045 | MS.gene09873 | 0.84054 | 8.18E-58 | -1.69E-46 |
MS.gene050689 | MS.gene09873 | 0.848789 | 4.90E-60 | -1.69E-46 |
MS.gene050807 | MS.gene09873 | 0.824397 | 8.25E-54 | -1.69E-46 |
MS.gene050838 | MS.gene09873 | 0.812133 | 4.94E-51 | -1.69E-46 |
MS.gene050901 | MS.gene09873 | 0.86971 | 2.53E-66 | -1.69E-46 |
MS.gene051003 | MS.gene09873 | 0.800033 | 1.74E-48 | -1.69E-46 |
MS.gene051018 | MS.gene09873 | 0.806918 | 6.51E-50 | -1.69E-46 |
MS.gene051234 | MS.gene09873 | 0.807095 | 5.98E-50 | -1.69E-46 |
MS.gene051247 | MS.gene09873 | 0.834994 | 2.17E-56 | -1.69E-46 |
MS.gene051328 | MS.gene09873 | 0.866814 | 2.17E-65 | -1.69E-46 |
MS.gene05134 | MS.gene09873 | 0.812711 | 3.69E-51 | -1.69E-46 |
MS.gene05157 | MS.gene09873 | 0.821494 | 3.92E-53 | -1.69E-46 |
MS.gene051664 | MS.gene09873 | 0.836797 | 7.58E-57 | -1.69E-46 |
MS.gene051700 | MS.gene09873 | 0.815876 | 7.38E-52 | -1.69E-46 |
MS.gene051719 | MS.gene09873 | 0.881382 | 2.51E-70 | -1.69E-46 |
MS.gene051720 | MS.gene09873 | 0.862256 | 5.76E-64 | -1.69E-46 |
MS.gene051744 | MS.gene09873 | 0.820715 | 5.93E-53 | -1.69E-46 |
MS.gene05188 | MS.gene09873 | 0.800091 | 1.70E-48 | -1.69E-46 |
MS.gene051975 | MS.gene09873 | 0.814066 | 1.86E-51 | -1.69E-46 |
MS.gene052133 | MS.gene09873 | 0.848016 | 8.02E-60 | -1.69E-46 |
MS.gene052335 | MS.gene09873 | 0.800859 | 1.18E-48 | -1.69E-46 |
MS.gene052516 | MS.gene09873 | 0.855687 | 5.34E-62 | -1.69E-46 |
MS.gene052519 | MS.gene09873 | 0.834624 | 2.69E-56 | -1.69E-46 |
MS.gene052611 | MS.gene09873 | 0.802411 | 5.68E-49 | -1.69E-46 |
MS.gene052773 | MS.gene09873 | 0.810279 | 1.25E-50 | -1.69E-46 |
MS.gene052863 | MS.gene09873 | 0.804667 | 1.94E-49 | -1.69E-46 |
MS.gene052879 | MS.gene09873 | 0.812413 | 4.29E-51 | -1.69E-46 |
MS.gene052947 | MS.gene09873 | 0.82627 | 2.98E-54 | -1.69E-46 |
MS.gene053008 | MS.gene09873 | 0.825452 | 4.65E-54 | -1.69E-46 |
MS.gene053122 | MS.gene09873 | 0.824919 | 6.22E-54 | -1.69E-46 |
MS.gene053144 | MS.gene09873 | 0.820281 | 7.45E-53 | -1.69E-46 |
MS.gene053226 | MS.gene09873 | 0.85736 | 1.72E-62 | -1.69E-46 |
MS.gene053563 | MS.gene09873 | 0.811138 | 8.13E-51 | -1.69E-46 |
MS.gene053581 | MS.gene09873 | 0.845198 | 4.72E-59 | -1.69E-46 |
MS.gene053599 | MS.gene09873 | 0.823413 | 1.40E-53 | -1.69E-46 |
MS.gene05364 | MS.gene09873 | 0.850996 | 1.18E-60 | -1.69E-46 |
MS.gene054142 | MS.gene09873 | 0.825254 | 5.18E-54 | -1.69E-46 |
MS.gene054584 | MS.gene09873 | 0.807969 | 3.90E-50 | -1.69E-46 |
MS.gene054651 | MS.gene09873 | 0.816353 | 5.78E-52 | -1.69E-46 |
MS.gene055144 | MS.gene09873 | 0.802362 | 5.82E-49 | -1.69E-46 |
MS.gene055162 | MS.gene09873 | 0.800903 | 1.16E-48 | -1.69E-46 |
MS.gene055465 | MS.gene09873 | 0.833496 | 5.16E-56 | -1.69E-46 |
MS.gene055466 | MS.gene09873 | 0.852372 | 4.82E-61 | -1.69E-46 |
MS.gene055468 | MS.gene09873 | 0.843201 | 1.62E-58 | -1.69E-46 |
MS.gene055512 | MS.gene09873 | 0.816698 | 4.84E-52 | -1.69E-46 |
MS.gene055513 | MS.gene09873 | 0.826881 | 2.13E-54 | -1.69E-46 |
MS.gene055537 | MS.gene09873 | 0.807507 | 4.89E-50 | -1.69E-46 |
MS.gene055580 | MS.gene09873 | -0.828415 | 9.11E-55 | -1.69E-46 |
MS.gene055778 | MS.gene09873 | 0.806682 | 7.31E-50 | -1.69E-46 |
MS.gene055808 | MS.gene09873 | 0.806214 | 9.17E-50 | -1.69E-46 |
MS.gene055818 | MS.gene09873 | 0.815157 | 1.07E-51 | -1.69E-46 |
MS.gene055891 | MS.gene09873 | 0.80708 | 6.02E-50 | -1.69E-46 |
MS.gene055912 | MS.gene09873 | 0.821351 | 4.23E-53 | -1.69E-46 |
MS.gene056005 | MS.gene09873 | 0.82841 | 9.13E-55 | -1.69E-46 |
MS.gene056043 | MS.gene09873 | -0.813385 | 2.63E-51 | -1.69E-46 |
MS.gene05608 | MS.gene09873 | 0.815747 | 7.89E-52 | -1.69E-46 |
MS.gene056174 | MS.gene09873 | 0.801694 | 7.98E-49 | -1.69E-46 |
MS.gene056215 | MS.gene09873 | 0.897703 | 1.09E-76 | -1.69E-46 |
MS.gene056308 | MS.gene09873 | 0.828948 | 6.77E-55 | -1.69E-46 |
MS.gene056366 | MS.gene09873 | 0.81471 | 1.34E-51 | -1.69E-46 |
MS.gene056595 | MS.gene09873 | 0.841674 | 4.12E-58 | -1.69E-46 |
MS.gene056631 | MS.gene09873 | 0.803364 | 3.61E-49 | -1.69E-46 |
MS.gene057034 | MS.gene09873 | 0.809933 | 1.48E-50 | -1.69E-46 |
MS.gene057208 | MS.gene09873 | 0.801381 | 9.25E-49 | -1.69E-46 |
MS.gene057444 | MS.gene09873 | 0.803828 | 2.89E-49 | -1.69E-46 |
MS.gene057693 | MS.gene09873 | 0.824172 | 9.32E-54 | -1.69E-46 |
MS.gene057694 | MS.gene09873 | 0.8343 | 3.25E-56 | -1.69E-46 |
MS.gene057705 | MS.gene09873 | 0.844904 | 5.66E-59 | -1.69E-46 |
MS.gene057915 | MS.gene09873 | 0.800035 | 1.74E-48 | -1.69E-46 |
MS.gene058009 | MS.gene09873 | 0.80146 | 8.91E-49 | -1.69E-46 |
MS.gene058010 | MS.gene09873 | 0.806534 | 7.85E-50 | -1.69E-46 |
MS.gene058339 | MS.gene09873 | 0.806596 | 7.62E-50 | -1.69E-46 |
MS.gene058625 | MS.gene09873 | 0.815233 | 1.03E-51 | -1.69E-46 |
MS.gene058783 | MS.gene09873 | 0.824867 | 6.40E-54 | -1.69E-46 |
MS.gene058852 | MS.gene09873 | 0.810971 | 8.84E-51 | -1.69E-46 |
MS.gene05894 | MS.gene09873 | 0.800694 | 1.28E-48 | -1.69E-46 |
MS.gene058976 | MS.gene09873 | 0.809984 | 1.44E-50 | -1.69E-46 |
MS.gene059151 | MS.gene09873 | 0.825011 | 5.91E-54 | -1.69E-46 |
MS.gene059625 | MS.gene09873 | 0.814177 | 1.76E-51 | -1.69E-46 |
MS.gene05978 | MS.gene09873 | 0.83203 | 1.19E-55 | -1.69E-46 |
MS.gene059842 | MS.gene09873 | 0.811227 | 7.78E-51 | -1.69E-46 |
MS.gene059937 | MS.gene09873 | 0.808521 | 2.97E-50 | -1.69E-46 |
MS.gene060194 | MS.gene09873 | 0.813127 | 3.00E-51 | -1.69E-46 |
MS.gene060429 | MS.gene09873 | 0.860307 | 2.26E-63 | -1.69E-46 |
MS.gene060519 | MS.gene09873 | 0.811839 | 5.73E-51 | -1.69E-46 |
MS.gene060587 | MS.gene09873 | 0.85805 | 1.07E-62 | -1.69E-46 |
MS.gene060917 | MS.gene09873 | 0.826302 | 2.92E-54 | -1.69E-46 |
MS.gene061100 | MS.gene09873 | 0.809682 | 1.68E-50 | -1.69E-46 |
MS.gene061176 | MS.gene09873 | 0.831588 | 1.53E-55 | -1.69E-46 |
MS.gene061177 | MS.gene09873 | 0.831998 | 1.21E-55 | -1.69E-46 |
MS.gene061178 | MS.gene09873 | 0.83155 | 1.57E-55 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09873.t1 | MTR_7g029510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_7g099610 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_5g063620 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_4g061827 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_4g061920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g462400 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g054380 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g462730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g462510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g070920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g061440 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_3g462410 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_2g096100 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_8g038460 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene09873.t1 | MTR_4g128150 | 100.000 | 102 | 0 | 0 | 1 | 102 | 1 | 102 | 1.67e-66 | 204 |
MS.gene09873.t1 | MTR_7g029520 | 84.000 | 50 | 8 | 0 | 27 | 76 | 1 | 50 | 2.15e-21 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09873.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT5G59690 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT3G46320 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT3G45930 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT3G53730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT2G28740 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT1G07660 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene09873.t1 | AT1G07660 | 83.495 | 103 | 0 | 1 | 1 | 103 | 1 | 86 | 4.34e-51 | 155 |
Find 33 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTGTTCTCAAGATCTTCT+TGG | 0.300875 | 7.3:+12910474 | MS.gene09873:CDS |
GGAAGGACCCTTTACGGTTT+CGG | 0.307868 | 7.3:+12910589 | MS.gene09873:CDS |
TGGAAAAGGTGGAAAAGGTT+TGG | 0.419608 | 7.3:+12910318 | MS.gene09873:CDS |
GGAAAAGGTGGAAAAGGTTT+GGG | 0.432725 | 7.3:+12910319 | MS.gene09873:CDS |
AGGCAGGGAAGGACCCTTTA+CGG | 0.435749 | 7.3:+12910583 | MS.gene09873:CDS |
TCGCAGGCTTTGTTATGCCT+TGG | 0.436279 | 7.3:-12910387 | None:intergenic |
GGTGGAAAAGGTTTGGGAAA+GGG | 0.442921 | 7.3:+12910325 | MS.gene09873:CDS |
TCAACCACCGAAACCGTAAA+GGG | 0.488164 | 7.3:-12910596 | None:intergenic |
CTGCGATTCGTCGTCTTGCA+AGG | 0.502831 | 7.3:+12910404 | MS.gene09873:CDS |
TCAGTGCAAGCGAAAATGTC+AGG | 0.509801 | 7.3:+12910292 | None:intergenic |
TGTCTATGCTCTCAAGAGGC+AGG | 0.510611 | 7.3:+12910567 | MS.gene09873:CDS |
AAAATGTCAGGTCGTGGAAA+AGG | 0.512942 | 7.3:+12910304 | None:intergenic |
GGAAAAGGTTTGGGAAAGGG+AGG | 0.514769 | 7.3:+12910328 | MS.gene09873:CDS |
ATCAACCACCGAAACCGTAA+AGG | 0.525393 | 7.3:-12910597 | None:intergenic |
GGTCGTGGAAAAGGTGGAAA+AGG | 0.536368 | 7.3:+12910313 | MS.gene09873:CDS |
TTACTTACACTGAGCACGCT+AGG | 0.551062 | 7.3:+12910518 | MS.gene09873:CDS |
CAAGCGAAAATGTCAGGTCG+TGG | 0.551935 | 7.3:+12910298 | None:intergenic |
CTTGCAAGACGACGAATCGC+AGG | 0.552192 | 7.3:-12910403 | None:intergenic |
ATGCTCTCAAGAGGCAGGGA+AGG | 0.564763 | 7.3:+12910572 | MS.gene09873:CDS |
AGGTGGAAAAGGTTTGGGAA+AGG | 0.583555 | 7.3:+12910324 | MS.gene09873:CDS |
GTCTATGCTCTCAAGAGGCA+GGG | 0.585715 | 7.3:+12910568 | MS.gene09873:CDS |
GAGAAAGACTGTTACCGCCA+TGG | 0.588179 | 7.3:+12910540 | MS.gene09873:CDS |
ATGTCAGGTCGTGGAAAAGG+TGG | 0.588325 | 7.3:+12910307 | MS.gene09873:CDS |
AGGAGCAAAGAGACACAGAA+AGG | 0.597296 | 7.3:+12910348 | MS.gene09873:CDS |
AGGACCCTTTACGGTTTCGG+TGG | 0.602372 | 7.3:+12910592 | MS.gene09873:CDS |
CGTCGTCTTGCAAGGCGTGG+TGG | 0.615268 | 7.3:+12910412 | MS.gene09873:CDS |
ATTCGTCGTCTTGCAAGGCG+TGG | 0.619919 | 7.3:+12910409 | MS.gene09873:CDS |
GTTCTTCGCGATAACATCCA+AGG | 0.633409 | 7.3:+12910370 | MS.gene09873:CDS |
GAGAGCATAGACAACATCCA+TGG | 0.645428 | 7.3:-12910557 | None:intergenic |
ATGTTGTCTATGCTCTCAAG+AGG | 0.677658 | 7.3:+12910563 | MS.gene09873:CDS |
GGTGGTGTGAAGAGAATCAG+CGG | 0.689951 | 7.3:+12910430 | MS.gene09873:CDS |
CTCATCTATGAAGAGACTCG+CGG | 0.713431 | 7.3:+12910454 | MS.gene09873:CDS |
AGCATAGACAACATCCATGG+CGG | 0.735882 | 7.3:-12910554 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATGTTGTCTATGCTCTCAAG+AGG | + | chr7.3:12910563-12910582 | MS.gene09873:CDS | 40.0% | |
GGAAAAGGTGGAAAAGGTTT+GGG | + | chr7.3:12910319-12910338 | MS.gene09873:CDS | 40.0% | |
TGGAAAAGGTGGAAAAGGTT+TGG | + | chr7.3:12910318-12910337 | MS.gene09873:CDS | 40.0% | |
AGCATAGACAACATCCATGG+CGG | - | chr7.3:12910557-12910576 | None:intergenic | 45.0% | |
AGGAGCAAAGAGACACAGAA+AGG | + | chr7.3:12910348-12910367 | MS.gene09873:CDS | 45.0% | |
AGGTGGAAAAGGTTTGGGAA+AGG | + | chr7.3:12910324-12910343 | MS.gene09873:CDS | 45.0% | |
CGGTGTTCTCAAGATCTTCT+TGG | + | chr7.3:12910474-12910493 | MS.gene09873:CDS | 45.0% | |
CTCATCTATGAAGAGACTCG+CGG | + | chr7.3:12910454-12910473 | MS.gene09873:CDS | 45.0% | |
GGTGGAAAAGGTTTGGGAAA+GGG | + | chr7.3:12910325-12910344 | MS.gene09873:CDS | 45.0% | |
GTTCTTCGCGATAACATCCA+AGG | + | chr7.3:12910370-12910389 | MS.gene09873:CDS | 45.0% | |
TCAACCACCGAAACCGTAAA+GGG | - | chr7.3:12910599-12910618 | None:intergenic | 45.0% | |
TTACTTACACTGAGCACGCT+AGG | + | chr7.3:12910518-12910537 | MS.gene09873:CDS | 45.0% | |
! | GAGAGCATAGACAACATCCA+TGG | - | chr7.3:12910560-12910579 | None:intergenic | 45.0% |
ATGTCAGGTCGTGGAAAAGG+TGG | + | chr7.3:12910307-12910326 | MS.gene09873:CDS | 50.0% | |
GAGAAAGACTGTTACCGCCA+TGG | + | chr7.3:12910540-12910559 | MS.gene09873:CDS | 50.0% | |
GGAAAAGGTTTGGGAAAGGG+AGG | + | chr7.3:12910328-12910347 | MS.gene09873:CDS | 50.0% | |
GGAAGGACCCTTTACGGTTT+CGG | + | chr7.3:12910589-12910608 | MS.gene09873:CDS | 50.0% | |
GGTCGTGGAAAAGGTGGAAA+AGG | + | chr7.3:12910313-12910332 | MS.gene09873:CDS | 50.0% | |
GGTGGTGTGAAGAGAATCAG+CGG | + | chr7.3:12910430-12910449 | MS.gene09873:CDS | 50.0% | |
GTCTATGCTCTCAAGAGGCA+GGG | + | chr7.3:12910568-12910587 | MS.gene09873:CDS | 50.0% | |
TGTCTATGCTCTCAAGAGGC+AGG | + | chr7.3:12910567-12910586 | MS.gene09873:CDS | 50.0% | |
!! | TCGCAGGCTTTGTTATGCCT+TGG | - | chr7.3:12910390-12910409 | None:intergenic | 50.0% |
AGGACCCTTTACGGTTTCGG+TGG | + | chr7.3:12910592-12910611 | MS.gene09873:CDS | 55.0% | |
AGGCAGGGAAGGACCCTTTA+CGG | + | chr7.3:12910583-12910602 | MS.gene09873:CDS | 55.0% | |
ATGCTCTCAAGAGGCAGGGA+AGG | + | chr7.3:12910572-12910591 | MS.gene09873:CDS | 55.0% | |
ATTCGTCGTCTTGCAAGGCG+TGG | + | chr7.3:12910409-12910428 | MS.gene09873:CDS | 55.0% | |
CTGCGATTCGTCGTCTTGCA+AGG | + | chr7.3:12910404-12910423 | MS.gene09873:CDS | 55.0% | |
CTTGCAAGACGACGAATCGC+AGG | - | chr7.3:12910406-12910425 | None:intergenic | 55.0% | |
CGTCGTCTTGCAAGGCGTGG+TGG | + | chr7.3:12910412-12910431 | MS.gene09873:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 12910307 | 12910618 | 12910307 | ID=MS.gene09873 |
chr7.3 | mRNA | 12910307 | 12910618 | 12910307 | ID=MS.gene09873.t1;Parent=MS.gene09873 |
chr7.3 | exon | 12910307 | 12910618 | 12910307 | ID=MS.gene09873.t1.exon1;Parent=MS.gene09873.t1 |
chr7.3 | CDS | 12910307 | 12910618 | 12910307 | ID=cds.MS.gene09873.t1;Parent=MS.gene09873.t1 |
Gene Sequence |
Protein sequence |