Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072568.t1 | XP_013450440.1 | 96 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 7.20E-129 | 469.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072568.t1 | O23403 | 71.4 | 217 | 57 | 3 | 35 | 247 | 72 | 287 | 1.6e-81 | 303.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072568.t1 | A0A072U5R2 | 96.0 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 5.2e-129 | 469.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene072568 | 0.801072 | 1.07E-48 | -1.69E-46 |
MS.gene049285 | MS.gene072568 | 0.803056 | 4.18E-49 | -1.69E-46 |
MS.gene049351 | MS.gene072568 | 0.817603 | 3.03E-52 | -1.69E-46 |
MS.gene049427 | MS.gene072568 | 0.867251 | 1.57E-65 | -1.69E-46 |
MS.gene049491 | MS.gene072568 | 0.849768 | 2.61E-60 | -1.69E-46 |
MS.gene049614 | MS.gene072568 | 0.858855 | 6.18E-63 | -1.69E-46 |
MS.gene049661 | MS.gene072568 | 0.84013 | 1.05E-57 | -1.69E-46 |
MS.gene049662 | MS.gene072568 | 0.83356 | 4.97E-56 | -1.69E-46 |
MS.gene049760 | MS.gene072568 | 0.819801 | 9.60E-53 | -1.69E-46 |
MS.gene049805 | MS.gene072568 | 0.811451 | 6.95E-51 | -1.69E-46 |
MS.gene049828 | MS.gene072568 | 0.800118 | 1.67E-48 | -1.69E-46 |
MS.gene050076 | MS.gene072568 | 0.874148 | 8.47E-68 | -1.69E-46 |
MS.gene050099 | MS.gene072568 | 0.808981 | 2.37E-50 | -1.69E-46 |
MS.gene050163 | MS.gene072568 | 0.832878 | 7.35E-56 | -1.69E-46 |
MS.gene050165 | MS.gene072568 | 0.805207 | 1.49E-49 | -1.69E-46 |
MS.gene050301 | MS.gene072568 | 0.839716 | 1.34E-57 | -1.69E-46 |
MS.gene050333 | MS.gene072568 | 0.815583 | 8.58E-52 | -1.69E-46 |
MS.gene050432 | MS.gene072568 | 0.867078 | 1.78E-65 | -1.69E-46 |
MS.gene05053 | MS.gene072568 | 0.80966 | 1.70E-50 | -1.69E-46 |
MS.gene050581 | MS.gene072568 | 0.810045 | 1.40E-50 | -1.69E-46 |
MS.gene050593 | MS.gene072568 | 0.802641 | 5.09E-49 | -1.69E-46 |
MS.gene050767 | MS.gene072568 | 0.973332 | 3.00E-136 | -1.69E-46 |
MS.gene050770 | MS.gene072568 | 0.972569 | 5.57E-135 | -1.69E-46 |
MS.gene050772 | MS.gene072568 | 0.817283 | 3.57E-52 | -1.69E-46 |
MS.gene050783 | MS.gene072568 | 0.846494 | 2.10E-59 | -1.69E-46 |
MS.gene05100 | MS.gene072568 | 0.817592 | 3.05E-52 | -1.69E-46 |
MS.gene05101 | MS.gene072568 | 0.903088 | 4.98E-79 | -1.69E-46 |
MS.gene05105 | MS.gene072568 | 0.815345 | 9.70E-52 | -1.69E-46 |
MS.gene051228 | MS.gene072568 | 0.855395 | 6.49E-62 | -1.69E-46 |
MS.gene051387 | MS.gene072568 | 0.800006 | 1.76E-48 | -1.69E-46 |
MS.gene051471 | MS.gene072568 | 0.851615 | 7.91E-61 | -1.69E-46 |
MS.gene051692 | MS.gene072568 | 0.800211 | 1.60E-48 | -1.69E-46 |
MS.gene051810 | MS.gene072568 | 0.817195 | 3.74E-52 | -1.69E-46 |
MS.gene051877 | MS.gene072568 | 0.823182 | 1.59E-53 | -1.69E-46 |
MS.gene052078 | MS.gene072568 | 0.858091 | 1.05E-62 | -1.69E-46 |
MS.gene052271 | MS.gene072568 | 0.882003 | 1.50E-70 | -1.69E-46 |
MS.gene052290 | MS.gene072568 | 0.868947 | 4.47E-66 | -1.69E-46 |
MS.gene052293 | MS.gene072568 | 0.813444 | 2.55E-51 | -1.69E-46 |
MS.gene052310 | MS.gene072568 | 0.861945 | 7.18E-64 | -1.69E-46 |
MS.gene052322 | MS.gene072568 | 0.813769 | 2.16E-51 | -1.69E-46 |
MS.gene052326 | MS.gene072568 | 0.881981 | 1.53E-70 | -1.69E-46 |
MS.gene052379 | MS.gene072568 | 0.845409 | 4.14E-59 | -1.69E-46 |
MS.gene052421 | MS.gene072568 | 0.807159 | 5.79E-50 | -1.69E-46 |
MS.gene052484 | MS.gene072568 | 0.801699 | 7.96E-49 | -1.69E-46 |
MS.gene052510 | MS.gene072568 | 0.800838 | 1.19E-48 | -1.69E-46 |
MS.gene053009 | MS.gene072568 | 0.849992 | 2.26E-60 | -1.69E-46 |
MS.gene053103 | MS.gene072568 | 0.812189 | 4.81E-51 | -1.69E-46 |
MS.gene053104 | MS.gene072568 | 0.819786 | 9.67E-53 | -1.69E-46 |
MS.gene053107 | MS.gene072568 | 0.803659 | 3.14E-49 | -1.69E-46 |
MS.gene053209 | MS.gene072568 | 0.818452 | 1.95E-52 | -1.69E-46 |
MS.gene053213 | MS.gene072568 | 0.827359 | 1.63E-54 | -1.69E-46 |
MS.gene053286 | MS.gene072568 | 0.817933 | 2.55E-52 | -1.69E-46 |
MS.gene053322 | MS.gene072568 | 0.888258 | 6.92E-73 | -1.69E-46 |
MS.gene053384 | MS.gene072568 | 0.809851 | 1.54E-50 | -1.69E-46 |
MS.gene053813 | MS.gene072568 | 0.824222 | 9.07E-54 | -1.69E-46 |
MS.gene054123 | MS.gene072568 | 0.816729 | 4.76E-52 | -1.69E-46 |
MS.gene054376 | MS.gene072568 | 0.999754 | 0.00E+00 | -1.69E-46 |
MS.gene05455 | MS.gene072568 | 0.826725 | 2.32E-54 | -1.69E-46 |
MS.gene054642 | MS.gene072568 | 0.834771 | 2.47E-56 | -1.69E-46 |
MS.gene054802 | MS.gene072568 | 0.907839 | 3.28E-81 | -1.69E-46 |
MS.gene054803 | MS.gene072568 | 0.910257 | 2.29E-82 | -1.69E-46 |
MS.gene054804 | MS.gene072568 | 0.912285 | 2.32E-83 | -1.69E-46 |
MS.gene05505 | MS.gene072568 | 0.814946 | 1.19E-51 | -1.69E-46 |
MS.gene055116 | MS.gene072568 | 0.813452 | 2.54E-51 | -1.69E-46 |
MS.gene055254 | MS.gene072568 | 0.895357 | 1.03E-75 | -1.69E-46 |
MS.gene055277 | MS.gene072568 | 0.88054 | 5.05E-70 | -1.69E-46 |
MS.gene055390 | MS.gene072568 | 0.836202 | 1.07E-56 | -1.69E-46 |
MS.gene055397 | MS.gene072568 | 0.910087 | 2.77E-82 | -1.69E-46 |
MS.gene055412 | MS.gene072568 | 0.816605 | 5.07E-52 | -1.69E-46 |
MS.gene055422 | MS.gene072568 | 0.833844 | 4.22E-56 | -1.69E-46 |
MS.gene055428 | MS.gene072568 | 0.831614 | 1.51E-55 | -1.69E-46 |
MS.gene055497 | MS.gene072568 | -0.813986 | 1.94E-51 | -1.69E-46 |
MS.gene055499 | MS.gene072568 | 0.912533 | 1.75E-83 | -1.69E-46 |
MS.gene055636 | MS.gene072568 | 0.821851 | 3.24E-53 | -1.69E-46 |
MS.gene055638 | MS.gene072568 | 0.800991 | 1.11E-48 | -1.69E-46 |
MS.gene055647 | MS.gene072568 | 0.877743 | 4.92E-69 | -1.69E-46 |
MS.gene055722 | MS.gene072568 | 0.821731 | 3.45E-53 | -1.69E-46 |
MS.gene055896 | MS.gene072568 | 0.850715 | 1.42E-60 | -1.69E-46 |
MS.gene05592 | MS.gene072568 | 0.864989 | 8.17E-65 | -1.69E-46 |
MS.gene055930 | MS.gene072568 | 0.816112 | 6.54E-52 | -1.69E-46 |
MS.gene056083 | MS.gene072568 | 0.827661 | 1.38E-54 | -1.69E-46 |
MS.gene056191 | MS.gene072568 | 0.823269 | 1.52E-53 | -1.69E-46 |
MS.gene056374 | MS.gene072568 | 0.830101 | 3.55E-55 | -1.69E-46 |
MS.gene056407 | MS.gene072568 | 0.814735 | 1.32E-51 | -1.69E-46 |
MS.gene056410 | MS.gene072568 | 0.83729 | 5.67E-57 | -1.69E-46 |
MS.gene056452 | MS.gene072568 | 0.803241 | 3.83E-49 | -1.69E-46 |
MS.gene056609 | MS.gene072568 | 0.850404 | 1.74E-60 | -1.69E-46 |
MS.gene056612 | MS.gene072568 | 0.81103 | 8.58E-51 | -1.69E-46 |
MS.gene056657 | MS.gene072568 | 0.807383 | 5.19E-50 | -1.69E-46 |
MS.gene056897 | MS.gene072568 | 0.804741 | 1.87E-49 | -1.69E-46 |
MS.gene057011 | MS.gene072568 | 0.847945 | 8.39E-60 | -1.69E-46 |
MS.gene05702 | MS.gene072568 | 0.831842 | 1.33E-55 | -1.69E-46 |
MS.gene057123 | MS.gene072568 | 0.833269 | 5.88E-56 | -1.69E-46 |
MS.gene057129 | MS.gene072568 | 0.903245 | 4.23E-79 | -1.69E-46 |
MS.gene057146 | MS.gene072568 | 0.831571 | 1.55E-55 | -1.69E-46 |
MS.gene057246 | MS.gene072568 | 0.801226 | 9.95E-49 | -1.69E-46 |
MS.gene057295 | MS.gene072568 | 0.86953 | 2.89E-66 | -1.69E-46 |
MS.gene057331 | MS.gene072568 | 0.840907 | 6.55E-58 | -1.69E-46 |
MS.gene05733 | MS.gene072568 | 0.801598 | 8.35E-49 | -1.69E-46 |
MS.gene057416 | MS.gene072568 | 0.854823 | 9.52E-62 | -1.69E-46 |
MS.gene058019 | MS.gene072568 | 0.852565 | 4.25E-61 | -1.69E-46 |
MS.gene058082 | MS.gene072568 | 0.805323 | 1.41E-49 | -1.69E-46 |
MS.gene058233 | MS.gene072568 | 0.812918 | 3.33E-51 | -1.69E-46 |
MS.gene058293 | MS.gene072568 | 0.871535 | 6.35E-67 | -1.69E-46 |
MS.gene058323 | MS.gene072568 | 0.834264 | 3.31E-56 | -1.69E-46 |
MS.gene058660 | MS.gene072568 | 0.887295 | 1.62E-72 | -1.69E-46 |
MS.gene058787 | MS.gene072568 | 0.823923 | 1.07E-53 | -1.69E-46 |
MS.gene058903 | MS.gene072568 | 0.83586 | 1.31E-56 | -1.69E-46 |
MS.gene058993 | MS.gene072568 | 0.809605 | 1.74E-50 | -1.69E-46 |
MS.gene059029 | MS.gene072568 | 0.819753 | 9.84E-53 | -1.69E-46 |
MS.gene05907 | MS.gene072568 | 0.804623 | 1.98E-49 | -1.69E-46 |
MS.gene059228 | MS.gene072568 | 0.80582 | 1.11E-49 | -1.69E-46 |
MS.gene059326 | MS.gene072568 | 0.856239 | 3.68E-62 | -1.69E-46 |
MS.gene059518 | MS.gene072568 | 0.80248 | 5.50E-49 | -1.69E-46 |
MS.gene059536 | MS.gene072568 | 0.863311 | 2.73E-64 | -1.69E-46 |
MS.gene059597 | MS.gene072568 | 0.821417 | 4.08E-53 | -1.69E-46 |
MS.gene05959 | MS.gene072568 | 0.811115 | 8.23E-51 | -1.69E-46 |
MS.gene059676 | MS.gene072568 | 0.848296 | 6.71E-60 | -1.69E-46 |
MS.gene059688 | MS.gene072568 | 0.835889 | 1.29E-56 | -1.69E-46 |
MS.gene059692 | MS.gene072568 | 0.848371 | 6.40E-60 | -1.69E-46 |
MS.gene059695 | MS.gene072568 | 0.854321 | 1.33E-61 | -1.69E-46 |
MS.gene059711 | MS.gene072568 | 0.807651 | 4.56E-50 | -1.69E-46 |
MS.gene059858 | MS.gene072568 | 0.835605 | 1.52E-56 | -1.69E-46 |
MS.gene059894 | MS.gene072568 | 0.811731 | 6.05E-51 | -1.69E-46 |
MS.gene059960 | MS.gene072568 | 0.909693 | 4.29E-82 | -1.69E-46 |
MS.gene059974 | MS.gene072568 | 0.827499 | 1.51E-54 | -1.69E-46 |
MS.gene060005 | MS.gene072568 | 0.847946 | 8.38E-60 | -1.69E-46 |
MS.gene060193 | MS.gene072568 | 0.816046 | 6.77E-52 | -1.69E-46 |
MS.gene060356 | MS.gene072568 | 0.807668 | 4.52E-50 | -1.69E-46 |
MS.gene06037 | MS.gene072568 | 0.844532 | 7.13E-59 | -1.69E-46 |
MS.gene060804 | MS.gene072568 | 0.855989 | 4.35E-62 | -1.69E-46 |
MS.gene060818 | MS.gene072568 | 0.833495 | 5.16E-56 | -1.69E-46 |
MS.gene061041 | MS.gene072568 | 0.818269 | 2.14E-52 | -1.69E-46 |
MS.gene061049 | MS.gene072568 | 0.812626 | 3.86E-51 | -1.69E-46 |
MS.gene061051 | MS.gene072568 | -0.821711 | 3.49E-53 | -1.69E-46 |
MS.gene061150 | MS.gene072568 | 0.819648 | 1.04E-52 | -1.69E-46 |
MS.gene061200 | MS.gene072568 | 0.911115 | 8.76E-83 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072568.t1 | MTR_7g111880 | 96.000 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 3.30e-172 | 474 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072568.t1 | AT4G15510 | 64.659 | 249 | 76 | 5 | 10 | 247 | 40 | 287 | 4.09e-105 | 306 |
MS.gene072568.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072568.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072568.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072568.t1 | AT4G15510 | 69.595 | 148 | 40 | 3 | 35 | 178 | 72 | 218 | 1.67e-62 | 196 |
Find 0 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCTTGATGAAAATATAT+CGG | + | 51768:31159-31178 | MS.gene072568:CDS | 15.0% |
!!! | ATATTTTCATCAAGAATATA+AGG | - | 51768:31157-31176 | None:intergenic | 15.0% |
!! | AAATAAAATAATTGTGACAG+AGG | - | 51768:30885-30904 | None:intergenic | 20.0% |
!! | TACATTTATCAGAAAAATTG+TGG | + | 51768:31386-31405 | MS.gene072568:intron | 20.0% |
! | GAATATGTTGATACATTTGA+TGG | + | 51768:31061-31080 | MS.gene072568:CDS | 25.0% |
AAAACTTACGGTAATTTGAG+GGG | + | 51768:31434-31453 | MS.gene072568:intron | 30.0% | |
AGAAAATGTGTTTCAAGAAG+AGG | + | 51768:31703-31722 | MS.gene072568:CDS | 30.0% | |
CAAAACTTACGGTAATTTGA+GGG | + | 51768:31433-31452 | MS.gene072568:intron | 30.0% | |
CATTCAACTATCCATCAAAT+TGG | + | 51768:31089-31108 | MS.gene072568:CDS | 30.0% | |
CTTACTTGAATCCAATTTGA+TGG | - | 51768:31103-31122 | None:intergenic | 30.0% | |
TCAAATTGGATTCAAGTAAG+AGG | + | 51768:31103-31122 | MS.gene072568:CDS | 30.0% | |
! | CAAATTGTACTATCAAGTTG+AGG | + | 51768:31357-31376 | MS.gene072568:CDS | 30.0% |
! | TCTTCTTGAAACACATTTTC+TGG | - | 51768:31704-31723 | None:intergenic | 30.0% |
!! | AATGACATTGCTTTTCTTCT+AGG | - | 51768:30974-30993 | None:intergenic | 30.0% |
ATGGATGGAATTTACCGAAT+TGG | - | 51768:30848-30867 | None:intergenic | 35.0% | |
ATTCAAGACTGTTCAAGACT+TGG | + | 51768:31210-31229 | MS.gene072568:CDS | 35.0% | |
CTCTGTTCTTGCAAAACTTA+CGG | + | 51768:31422-31441 | MS.gene072568:intron | 35.0% | |
GCAAAACTTACGGTAATTTG+AGG | + | 51768:31432-31451 | MS.gene072568:intron | 35.0% | |
GTAATCTCAACTCATACAGT+TGG | - | 51768:31676-31695 | None:intergenic | 35.0% | |
GTCTTGAATTTCGAAGAAGA+AGG | - | 51768:31199-31218 | None:intergenic | 35.0% | |
TGGATGGAATTTACCGAATT+GGG | - | 51768:30847-30866 | None:intergenic | 35.0% | |
TTACTGAGTTTATGTCCACT+AGG | + | 51768:31275-31294 | MS.gene072568:CDS | 35.0% | |
TTCAAGACTGTTCAAGACTT+GGG | + | 51768:31211-31230 | MS.gene072568:CDS | 35.0% | |
!!! | TGGTGCTGATATTTTCTTCA+GGG | + | 51768:31129-31148 | MS.gene072568:CDS | 35.0% |
!!! | TTTGAGGGGTGTCTTTTATA+TGG | + | 51768:31448-31467 | MS.gene072568:intron | 35.0% |
ACATATTCACGAAACACACG+AGG | - | 51768:31049-31068 | None:intergenic | 40.0% | |
ACCCGTTGTTGTGATTGTAT+TGG | - | 51768:30761-30780 | None:intergenic | 40.0% | |
ACTTACATTCTCTCCGACAT+TGG | + | 51768:31004-31023 | MS.gene072568:CDS | 40.0% | |
AGAGGAGAAAGCTCATGAAA+TGG | - | 51768:30867-30886 | None:intergenic | 40.0% | |
ATGGAAGTGAAATGGTGACA+TGG | - | 51768:30797-30816 | None:intergenic | 40.0% | |
GAATTTACCGAATTGGGTGT+GGG | - | 51768:30841-30860 | None:intergenic | 40.0% | |
GAGAAAGCTCATGAAATGGA+TGG | - | 51768:30863-30882 | None:intergenic | 40.0% | |
GCCAATACAATCACAACAAC+GGG | + | 51768:30757-30776 | MS.gene072568:CDS | 40.0% | |
GGCCAATACAATCACAACAA+CGG | + | 51768:30756-30775 | MS.gene072568:CDS | 40.0% | |
TGCTAATGCTGTACCAATGT+CGG | - | 51768:31020-31039 | None:intergenic | 40.0% | |
TGCTGTTATGCCACAAGATA+GGG | + | 51768:31595-31614 | MS.gene072568:CDS | 40.0% | |
TGGAAGTGAAATGGTGACAT+GGG | - | 51768:30796-30815 | None:intergenic | 40.0% | |
TTTCAACTCCTAGAACAGAC+AGG | - | 51768:31649-31668 | None:intergenic | 40.0% | |
! | TTGCTGTTATGCCACAAGAT+AGG | + | 51768:31594-31613 | MS.gene072568:CDS | 40.0% |
!! | TGTGTGTTGTTTGTGTTGCT+AGG | + | 51768:31538-31557 | MS.gene072568:intron | 40.0% |
!!! | CTGGTGCTGATATTTTCTTC+AGG | + | 51768:31128-31147 | MS.gene072568:CDS | 40.0% |
ACGTTTAACACCAAGCCTAG+TGG | - | 51768:31293-31312 | None:intergenic | 45.0% | |
AGTGAAATGGTGACATGGGT+CGG | - | 51768:30792-30811 | None:intergenic | 45.0% | |
ATCATCAGCAACTCTCTCAG+AGG | - | 51768:31335-31354 | None:intergenic | 45.0% | |
CATTTCTCCCACACCCAATT+CGG | + | 51768:30831-30850 | MS.gene072568:CDS | 45.0% | |
GAGTGAACTTCGTCAAGTCA+TGG | + | 51768:31727-31746 | MS.gene072568:CDS | 45.0% | |
GAGTTTATGTCCACTAGGCT+TGG | + | 51768:31280-31299 | MS.gene072568:CDS | 45.0% | |
GGAATTTACCGAATTGGGTG+TGG | - | 51768:30842-30861 | None:intergenic | 45.0% | |
GGCTTCGTTTCGAGCAAATA+AGG | + | 51768:31748-31767 | MS.gene072568:CDS | 45.0% | |
TCTGAGAGAGTTGCTGATGA+TGG | + | 51768:31334-31353 | MS.gene072568:CDS | 45.0% | |
TGTTATGCCACAAGATAGGG+TGG | + | 51768:31598-31617 | MS.gene072568:CDS | 45.0% | |
! | TGGATTCAAGTAAGAGGTGC+TGG | + | 51768:31109-31128 | MS.gene072568:CDS | 45.0% |
!! | ACTTTCTTCCCAGCTTGTTG+AGG | - | 51768:31241-31260 | None:intergenic | 45.0% |
AAACGCACCACCCTATCTTG+TGG | - | 51768:31608-31627 | None:intergenic | 50.0% | |
ACAAGATAGGGTGGTGCGTT+TGG | + | 51768:31607-31626 | MS.gene072568:CDS | 50.0% | |
ATAGGGTGGTGCGTTTGGAA+TGG | + | 51768:31612-31631 | MS.gene072568:CDS | 50.0% | |
ATCAGCAACTCTCTCAGAGG+TGG | - | 51768:31332-31351 | None:intergenic | 50.0% | |
CGAATTGGGTGTGGGAGAAA+TGG | - | 51768:30833-30852 | None:intergenic | 50.0% | |
CGAGGGGAATGGAAGTGAAA+TGG | - | 51768:30805-30824 | None:intergenic | 50.0% | |
GTGAAATGGTGACATGGGTC+GGG | - | 51768:30791-30810 | None:intergenic | 50.0% | |
! | TAGGGTGGTGCGTTTGGAAT+GGG | + | 51768:31613-31632 | MS.gene072568:CDS | 50.0% |
! | TGCGTTTGGAATGGGATAGG+AGG | + | 51768:31621-31640 | MS.gene072568:CDS | 50.0% |
! | TGGTGCGTTTGGAATGGGAT+AGG | + | 51768:31618-31637 | MS.gene072568:CDS | 50.0% |
!! | AGGAGGTACCTGTCTGTTCT+AGG | + | 51768:31638-31657 | MS.gene072568:CDS | 50.0% |
AAATGGAGCAGCGAGGGGAA+TGG | - | 51768:30816-30835 | None:intergenic | 55.0% | |
TGGGAGAAATGGAGCAGCGA+GGG | - | 51768:30822-30841 | None:intergenic | 55.0% | |
TGGGTTCGCCTCAACAAGCT+GGG | + | 51768:31230-31249 | MS.gene072568:CDS | 55.0% | |
TTGGGTTCGCCTCAACAAGC+TGG | + | 51768:31229-31248 | MS.gene072568:CDS | 55.0% | |
GGGAGAAATGGAGCAGCGAG+GGG | - | 51768:30821-30840 | None:intergenic | 60.0% | |
GTGGGAGAAATGGAGCAGCG+AGG | - | 51768:30823-30842 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51768 | gene | 30754 | 31781 | 30754 | ID=MS.gene072568 |
51768 | mRNA | 30754 | 31781 | 30754 | ID=MS.gene072568.t1;Parent=MS.gene072568 |
51768 | exon | 30754 | 30852 | 30754 | ID=MS.gene072568.t1.exon1;Parent=MS.gene072568.t1 |
51768 | CDS | 30754 | 30852 | 30754 | ID=cds.MS.gene072568.t1;Parent=MS.gene072568.t1 |
51768 | exon | 30950 | 31378 | 30950 | ID=MS.gene072568.t1.exon2;Parent=MS.gene072568.t1 |
51768 | CDS | 30950 | 31378 | 30950 | ID=cds.MS.gene072568.t1;Parent=MS.gene072568.t1 |
51768 | exon | 31560 | 31781 | 31560 | ID=MS.gene072568.t1.exon3;Parent=MS.gene072568.t1 |
51768 | CDS | 31560 | 31781 | 31560 | ID=cds.MS.gene072568.t1;Parent=MS.gene072568.t1 |
Gene Sequence |
Protein sequence |