AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69006


Find 241 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr6.2 gene 86951372 86957661 86951372 ID=MS.gene69006
chr6.2 mRNA 86951372 86957661 86951372 ID=MS.gene69006.t1;Parent=MS.gene69006
chr6.2 exon 86951372 86951765 86951372 ID=MS.gene69006.t1.exon1;Parent=MS.gene69006.t1
chr6.2 CDS 86951372 86951765 86951372 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86952417 86952539 86952417 ID=MS.gene69006.t1.exon2;Parent=MS.gene69006.t1
chr6.2 CDS 86952417 86952539 86952417 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86952999 86953476 86952999 ID=MS.gene69006.t1.exon3;Parent=MS.gene69006.t1
chr6.2 CDS 86952999 86953476 86952999 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86953504 86954456 86953504 ID=MS.gene69006.t1.exon4;Parent=MS.gene69006.t1
chr6.2 CDS 86953504 86954456 86953504 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86954642 86954716 86954642 ID=MS.gene69006.t1.exon5;Parent=MS.gene69006.t1
chr6.2 CDS 86954642 86954716 86954642 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86954879 86955040 86954879 ID=MS.gene69006.t1.exon6;Parent=MS.gene69006.t1
chr6.2 CDS 86954879 86955040 86954879 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86955350 86956061 86955350 ID=MS.gene69006.t1.exon7;Parent=MS.gene69006.t1
chr6.2 CDS 86955350 86956061 86955350 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
chr6.2 exon 86957028 86957661 86957028 ID=MS.gene69006.t1.exon8;Parent=MS.gene69006.t1
chr6.2 CDS 86957028 86957661 86957028 ID=cds.MS.gene69006.t1;Parent=MS.gene69006.t1
Gene Sequence

>MS.gene69006

ATGTCACAACATCTTCCCAATTTGAGAAAATTGGATCTAAGTGACTTAAGAAGTCTAGAAAAGATAATAGATTTTGGAGAGTTCCCGAATCTTGAGTGGTTAAATTTGGAAAGATGTATAAACCTGGTGGAGTTGGATCCGTCTATTGGACTTCTAAGAAAGCTTGTTTACTTGAACTTAGAATATTGCAAAAATCTTGTGAGCATACCCAACAACATATTCGATCTTAGCTCTCTTGAATATCTAAATATGCAACACTGTTCCAAAGCGTTTAAGAATGGATCAACGTCCTCTGTCTTCAAATATTTGTTGCCATCCTTGCATAGCTTAGATTGTTTGCGTGATGTTGACATTAGCTTTTGCAATCTAAGCCAAGTTCCTGATTCAATTGAATGTTTACGCTCGCTAGAAAGATTAAATTTAGGGGGAAACTATTTTGTGACACTACCTAGCCTAAGGAAGCTTTCCAAACTTGTATATTTAAATTTGGAACATTGAAAGTTGTTGGAATCTTTGCCTCAACTTCCTCCTCCTACCACTCTTGGGCGGGATCATCGTGAGTACGGCTATCCCTCGGATACAGGATTGTTAATTTTCAACTGTCCAAAATTGGGTGATAGGGAAGGTTGCAGGAGCATGACACTTTCATGGATGACACAATTTATTAAGGCAAACCCACAATCCTCGTTAGAGAATGTAACTCCAGGATGTGAAATACCAAGTTGGATCAACAATCAAAGTGTGGGCGATTCAATACAAATAGACAAATCTCCTATTATGCATGACAATAACAATAATATCATTGGCTTTCTATGTTGTGCAGTATTTTCCGTTGTACCTCATCATGAGTTGTTGAACAATTTACATCTGGTTTTAGGGTCATGTATGGATTTCAATAAGACATATATGAGAGTTCCAGTAAATCTCGATTATCATCTTATTACGACCAAATCAAGTCACCTATGGATAAAATACATCACCGATGATGATTATATTCAGATGAACAGTTGGGATAAAATCCACTTTTCTGGGATTAATCGTTTAGGTATGAAGGTGAAGAGTTTGGGCATGGAGGTGAAGAGTTACGGGTATCGTTGGGTATGTAAACAAGACCTACAAGAGTTCAACGTAACAATGATGAATCACCAAAAATCCTTATCTCAAAAGTGTAAGATTTTGGCAATTGAAGATGAGACACAACCAGAACCGCAACCAGAACAAGAATCATTCATCTCACAAGGCATACCTACTTCAACCGCAAAAACAATCTCTGTTGTCAACCGCAAGCAGAGGTATGTTATCATGTTATGTTATGTTGTAATTTTATCTTGTTTTGAGATTAGCATGTTATCATGTTATGTTACGTAGACATATTAGTATTTTGTAAATCACATTGACGACATGATGGAGATAATTAAATTTTTCTAAGATATTGTAATCCAAAAACTTAAAACGTATTTTGGATTTTGTTTTAAGTTTTGAACAATTTTAACACAGCATATGAATAAGTGATAAGAAGAAGTAACCAATTTTGTAAATTACCATAAATTATGTACTTTTTTTCAAATTATTACTGAAATCTGCATTCATGTCATCCACCGAAATAAATCTCAAACCTCCATATCAGCCACAGAAACGGAAGTATCCGTGGAGGTAAAAGATTCACCTGTTGCCGATGAAGTTTCTAGTGAATCTTCTTCAAATGAAGTTGGAACAAGTGAAGACTCATCTCCTAAGTCTGATGCCAACACTGGTTCTACGAAAGCCAAACGTTCAAGACCTGCAAGGAAAAGCGAGATGCCTCCTGTAAAGAATGAGGATTTGGTTCCCGGGGCAGCTTTTACGGGGAAAGTAAAATCTATCCAACCATTTGGTGCGTTTGTTGATTTTGGAGCTTTCACGGATGGACTTGTTCATATTTCAATGTTGAGTGATAGCTTTGTAAAGGATGTCTCAAGTGTTGTGTCTCTTGGACAAGAAGTTACGGTGAAGGTGATTGAAGTGAATGCTGAAACTAAGCGTATATCTCTATCTATGCGTGAAAACACTGATACTGGTAAACGTAATGATGCACCGAACAATGCAGAGAAATCCGGCTCTGGGAGGTAGGATTCTCCGAAATCGGGTCCAAGGAAAGATAAGAAAAACACAAAATTTGTTGTAGGTCAGGAGTTGCAGGGTACGGTGAAGAATATGACGAGGAGTGGTACTTTTATATCACTTCCTGAAGGAGAGGAAGGATTTCTACCATTAGCTGAGGAAGATGACGATGGATTTGGGAAGATAATGGGAAAATCTTCTTTGGAGATTGGTCGAGAAGTTAGTGTACGAGTTTTGCGTATCACAAGAGGACAAGCGACATTGACCATGAAGAAGGAAGGAGCTGTTGCAGAATTGGACAAGGCACTTGCACAAGTGGGTGATGACATCGCAACAAACCCTTTTGTATTGGCTTTTCGTAGAAACAAGGATATTGCTAAATTTTTGGATCAGAGGGAGAAACTTCAGAGTGAAGTTAAATCATCAACTACAGAAATTGTGGAAGATTCACTGGTCGATTCCTCGACAACTGTTGTGGACGCTGAAAGCAACCAAGAAGGAAGTATTATAAACGGTGCCGCTGAGAAGGAAACAGAGGCGGTTGCTGAAAGTTTGGCTTCAGAAGAAGATTTAGATGCTGTAAATTCAATTATCGAGGAAGCTATTCAGACAGATATTGCAACAAGCAACGTCGAAACTGATTCACCGGTTGAAGTGGCTGATGAAAGTTTAATAGAAACTGACTCACTGGTTGAAGTGGCTGATCAAATTGTTGCAGAAGATGAAAAACTATCAGAAACTGACAATGGAAAGGAAGAATTTGTAGCTGCAACCGAGGTGGCTGATGAAAGTTTAATAGAAACTGACTCACTGGTTGAAGTGGCGGATCAAATTGTTGCGGAAGATGAAAAACTATCAGAAACCGACAATGGAAAGGAAGAACTTGTAGCTGCAACCGAGGCAGATAGTGATGCAGTTGAGCCTGGCCCTGTTGTTACAGAATCAGAGATTACGTCAAGGGCACCAGCTCCTCAAGAAACACCAGGTTCTTGTTTTCTATCTGTCTCTCTTTCTGCCCTTCTATCTCATTCGTATTTACATATGGAAATATTGGTCGTATGTCATTATCCAAAATTACAACTAAAATCAAACATATTTTGTGCAGTAAGATGCATGTTTAAGAGTTTCTTATTAACTTAACTAATAATATTTCCTTTGCATTTCAAATAGATGACAATGTTGCAGCTGTTTCAGAGAACAATGCGATTGATGCTAGTTTGTCCCCTGAGGAAAGCTTGAATAAAGGTTATGAATGAAATTGATAGAAAGTTTTTTGAGCTTGTTTGAACTTTATATTTAAATCATATATTACACCCCATTTCCTATATGATCCCAATCAACTTTATGCAACCGGAGCAATTTTCTTTTCCTATAGTATCCTATTAACTTTGAATCCTCTTTCGGCAGATGTAGCTGAAGAAAACAATCAAGTTCCCTCTCCTGAAAGTCCTGCCACTGAAGAGGTGCAAGAACAAACACCTGTATCAGCACAAGTTGAAGATGAAGCGGTTGCAATTGCATCTGAAACAAACAGCAACTTATCTGCTTCAGATGAAGGCTCGACTAAAGGTTTCCATTTCATCTTATTTGCTTCATATTTCAACTCTCGTTTTTCTATATCAAACAGAAATAAATATATTAGACAGATTTGAATTTTTACATGTAAAAGAGAAGAAAAAATGAATATACTTCCATCTTTAATGTATTTTGTCTTTTGTTATCAAAATAGCTTATATATTGAGTGCTTATCTTATAAGCTTTAATTAGGTTGTTTATCCAAACAAGGGCATAGTTTTCTAGCCTGTTCACCTATCTTTGAATTCTTAGATAAGAGTTTCTAATTGTTAAATGTTTGTTCCGCCGCCCTTTGGATTGCAGCAACTATATCACCTGCACTTGTGAAGCAACTTCGGGACGAAACAGGAGCTGGAATGATGGACTGCAAAAATGCTCTTTCTGAAAGTGAAGGTGACATTATCAAAGCACAAGAGCTCCTTAGAAAAAAAGGCTTAGCGAGTGCAGACAAGAAAGCAACCAGAGCAACCGCCGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATCGGTGTTTTAGTAGAAGTAAATTGCGAGACAGATTTTGTCTCCCGAGGTGAAATTTTCAAAGAGCTTGTCGATGATATAGCCATGCAAGTGGCTGCGTGCCCCCAAGTAGAGTATGTTGTTACTGAAGACGTTCCTGAGGAGTTCGTGAAGAAAGAAACGGAGATAGAAATGCAAAAAGAAGATCTTGCGTCAAAACCGGAGCAAATTAGATCAAGGATTGTTGAAGGACGGATAAGGAAAAGACTTGAGGATTTAGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAAGTGACAGTAAAGGATATGGTTAAGCAGACAATTGCAACCATTGGAGAAAATATGAAAGTTACAAGGTTTGTGCGTTTCAACCTCGGAGAAGGTTTGGAAAAGAAAAGCCAGGATTTTGCTGCTGAAGTCGCCGCACAAACTTCAGCAAAACCAGTAACTACTCCAGTGACAGAGGAGCCTGCTGCCGCAGAAGCCAAGGAGACTGAACCAAAGTAAGTGTAGTTCAATGAATTTCAACTTGTTATTGAGTTATTTAATTATGAAATTTTGGTAGACATTTAAAAACAAGATAAAGGCTGGCTTTTAAATTAAGTTAAAGGACCCCTTGTGTAGTTTTTCCCATTATGAAATTTCCATAATTATGCCAAAGTAGATATTTCTTGGCTCATCTGTGTTCTAAATCGTTCAGGCAATGGCTTGGATTTCTCATTTTCCTACTCTTTTTTATTCACTTCAAATTTTATATTACTCTTTACAAATGATGTGAAGAATTGACTCACTTTTGAAATCTACAAACTATATGAGGGTGCTACGTTTTCTTGAATATTTTAACCCTAACCTTCCCTGCAATATTTGTATTTATGTTAAATATTAGTACCTATGAGTTATTCTTGCTATAGACAAAACTTAACCTAACTGTGACTGTATGATTTGTGAGCGTCAGTCTACGAAAGCACTGACACGAATACGGACTTTTGACACAACACTAACACTGACATGCTAGTTGTACACACAAAATTTGAGAAAAAAATGGATGTGTTTGACACAAATATTTAATTGTTCAATGTTGTGTTGAAGAACTGACTCACTTTTGGAATCTCTTAAAGGAACTGACTCACTTATGAAATCTACAAACTATAAGAGGGTGCTATGTTTTCTTTGAATATTTTAACCCTAACCTTCCCTGCATATTTGTTTTTTTATTAAATATTACCTATGACAAAACTTAACCTATGCTGTAACTGTATGATTTGTGAGAGTCAGTCTATGAAAACACAAACACAAATACGGACATTTGACACGAAACTAACACTGACATGCCGACACCAGTAGTAATTTTAGAAAATGCAACAGCTGAATGTAACAACATGTGTACGTGTTAGTTGTAAACACAAAATTTGAGAAAAAAAATGGATCTGTTTGACGAAAATATTAAATTGTTCAATGTTGTGTTGCAGGAAATCAACAGTAGTGGTCTCAGCGTCTTTGGTCAAGCAACTACGAGAAGAAACCGGTGCAGGGATGATGGACTGTAAGAAAGCTCTTGCTGAAACGGAAGGGGATCTTGAAAAGGCGCAAGCATATCTTAGGAAAAAGGGTCTCTCATCCGCTGATAAGAAATCCGGAAGACTAGCAGCTGAAGGAAGAATCGGCACATACATTCACGATGCACGCATCGGTGTTCTAATCGAAGTGAACTGTGAAACCGACTTTGTTGGCAGAAGTGAGAAATTCAAGGAGTTGGTTGATGAGCTTGCAATGCAAGTTGCTGCTTGTCCACAGGTTCAGTTTGTATCTATTGAAGATATTCCCGAAACTATTGTAACGAAGGAAAAAGAACTTGAGATGCAAAGAGAAGACCTTGCTTCAAAACCCGAGAACATTAGAGAGAAAATTGTCGAGGGAAGAATCTCAAAGAGGTTAGGAGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTGTAGTGAAAGACTTGGTGAGACAAAGTATAGCTGCTATTGGAGAGAACATTAAAGTGCGGCGTTTTGTTCGGTTCACTCTTGGAGAAACAGTTCAAAAAGAAACAGCCATACCAGCGTAG

Protein sequence

>MS.gene69006.t1

MSQHLPNLRKLDLSDLRSLEKIIDFGEFPNLEWLNLERCINLVELDPSIGLLRKLVYLNLEYCKNLVSIPNNIFDLSSLEYLNMQHCSKAFKNGSTSSVFKYLLPSLHSLDCLRDVDISFCNLSQVPDSIECMKVKSLGMEVKSYGYRWVCKQDLQEFNVTMMNHQKSLSQKSTETEVSVEVKDSPVADEVSSESSSNEVGTSEDSSPKSDANTGSTKAKRSRPARKSEMPPVKNEDLVPGAAFTGKVKSIQPFGAFVDFGAFTDGLVHISMLSDSFVKDVSSVVSLGQEVTVKVIEVNAETKRISLSMRENTDTGKRNDAPNNAEKSGSGRKDKKNTKFVVGQELQGTVKNMTRSGTFISLPEGEEGFLPLAEEDDDGFGKIMGKSSLEIGREVSVRVLRITRGQATLTMKKEGAVAELDKALAQVGDDIATNPFVLAFRRNKDIAKFLDQREKLQSEVKSSTTEIVEDSLVDSSTTVVDAESNQEGSIINGAAEKETEAVAESLASEEDLDAVNSIIEEAIQTDIATSNVETDSPVEVADESLIETDSLVEVADQIVAEDEKLSETDNGKEEFVAATEVADESLIETDSLVEVADQIVAEDEKLSETDNGKEELVAATEADSDAVEPGPVVTESEITSRAPAPQETPDDNVAAVSENNAIDASLSPEESLNKDVAEENNQVPSPESPATEEVQEQTPVSAQVEDEAVAIASETNSNLSASDEGSTKATISPALVKQLRDETGAGMMDCKNALSESEGDIIKAQELLRKKGLASADKKATRATAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYVVTEDVPEEFVKKETEIEMQKEDLASKPEQIRSRIVEGRIRKRLEDLALLEQPYIKNDKVTVKDMVKQTIATIGENMKVTRFVRFNLGEGLEKKSQDFAAEVAAQTSAKPVTTPVTEEPAAAEAKETEPKKSTVVVSASLVKQLREETGAGMMDCKKALAETEGDLEKAQAYLRKKGLSSADKKSGRLAAEGRIGTYIHDARIGVLIEVNCETDFVGRSEKFKELVDELAMQVAACPQVQFVSIEDIPETIVTKEKELEMQREDLASKPENIREKIVEGRISKRLGELALLEQPFIKDDSVVVKDLVRQSIAAIGENIKVRRFVRFTLGETVQKETAIPA