Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40212.t1 | XP_003603691.1 | 98.5 | 531 | 8 | 0 | 1 | 531 | 1 | 531 | 8.90E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40212.t1 | P93111 | 78.8 | 552 | 96 | 3 | 1 | 531 | 1 | 552 | 5.0e-237 | 821.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40212.t1 | G7J442 | 98.5 | 531 | 8 | 0 | 1 | 531 | 1 | 531 | 6.4e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene40212 | 0.817777 | 2.77E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene40212 | 0.823077 | 1.68E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene40212 | 0.811974 | 5.35E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene40212 | 0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene40212 | 0.832868 | 7.39E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene40212 | 0.852063 | 5.90E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene40212 | 0.854099 | 1.54E-61 | -1.69E-46 |
| MS.gene049427 | MS.gene40212 | 0.895241 | 1.16E-75 | -1.69E-46 |
| MS.gene049491 | MS.gene40212 | 0.860469 | 2.02E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene40212 | 0.817552 | 3.11E-52 | -1.69E-46 |
| MS.gene049614 | MS.gene40212 | 0.836259 | 1.04E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene40212 | 0.823445 | 1.38E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene40212 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene40212 | 0.823049 | 1.71E-53 | -1.69E-46 |
| MS.gene049760 | MS.gene40212 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene40212 | 0.875479 | 2.98E-68 | -1.69E-46 |
| MS.gene049907 | MS.gene40212 | 0.828132 | 1.07E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene40212 | 0.848856 | 4.69E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene40212 | 0.859186 | 4.92E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene40212 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene40212 | 0.901555 | 2.38E-78 | -1.69E-46 |
| MS.gene050520 | MS.gene40212 | 0.814092 | 1.84E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene40212 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene40212 | 0.848637 | 5.40E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene40212 | 0.84762 | 1.03E-59 | -1.69E-46 |
| MS.gene050686 | MS.gene40212 | 0.822362 | 2.47E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene40212 | 0.834391 | 3.08E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene40212 | 0.853735 | 1.96E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene40212 | 0.858456 | 8.14E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene40212 | 0.837899 | 3.96E-57 | -1.69E-46 |
| MS.gene050812 | MS.gene40212 | 0.840528 | 8.24E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene40212 | 0.832034 | 1.19E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene40212 | 0.853602 | 2.14E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene40212 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene051228 | MS.gene40212 | 0.843665 | 1.22E-58 | -1.69E-46 |
| MS.gene051255 | MS.gene40212 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene40212 | 0.840817 | 6.92E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene40212 | 0.881411 | 2.45E-70 | -1.69E-46 |
| MS.gene051471 | MS.gene40212 | 0.824112 | 9.63E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene40212 | 0.833288 | 5.81E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene40212 | 0.878321 | 3.09E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene40212 | 0.87829 | 3.17E-69 | -1.69E-46 |
| MS.gene051694 | MS.gene40212 | 0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene40212 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene40212 | 0.809939 | 1.48E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene40212 | 0.825975 | 3.50E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene40212 | 0.858431 | 8.28E-63 | -1.69E-46 |
| MS.gene052253 | MS.gene40212 | 0.825227 | 5.26E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene40212 | 0.840973 | 6.30E-58 | -1.69E-46 |
| MS.gene052290 | MS.gene40212 | 0.848422 | 6.19E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene40212 | 0.875675 | 2.56E-68 | -1.69E-46 |
| MS.gene052322 | MS.gene40212 | 0.852258 | 5.19E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene40212 | 0.861419 | 1.04E-63 | -1.69E-46 |
| MS.gene052340 | MS.gene40212 | 0.847708 | 9.75E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene40212 | 0.865524 | 5.55E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene40212 | 0.857238 | 1.87E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene40212 | 0.857589 | 1.47E-62 | -1.69E-46 |
| MS.gene052484 | MS.gene40212 | 0.87164 | 5.86E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene40212 | 0.886354 | 3.68E-72 | -1.69E-46 |
| MS.gene052508 | MS.gene40212 | 0.811947 | 5.42E-51 | -1.69E-46 |
| MS.gene052510 | MS.gene40212 | 0.809945 | 1.47E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene40212 | 0.826178 | 3.13E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene40212 | 0.83946 | 1.56E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene40212 | 0.823201 | 1.57E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene40212 | 0.819995 | 8.67E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene40212 | 0.900359 | 7.93E-78 | -1.69E-46 |
| MS.gene053104 | MS.gene40212 | 0.891045 | 5.68E-74 | -1.69E-46 |
| MS.gene053107 | MS.gene40212 | 0.844462 | 7.45E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene40212 | 0.853271 | 2.67E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene40212 | 0.858067 | 1.06E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene40212 | 0.83301 | 6.82E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene40212 | 0.826648 | 2.42E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene40212 | 0.900293 | 8.47E-78 | -1.69E-46 |
| MS.gene053384 | MS.gene40212 | 0.825282 | 5.10E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene40212 | 0.839293 | 1.73E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene40212 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene40212 | 0.825671 | 4.13E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene40212 | 0.856945 | 2.28E-62 | -1.69E-46 |
| MS.gene053836 | MS.gene40212 | 0.816074 | 6.67E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene40212 | 0.806047 | 9.94E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene40212 | 0.870263 | 1.66E-66 | -1.69E-46 |
| MS.gene054376 | MS.gene40212 | 0.835837 | 1.33E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene40212 | 0.822448 | 2.36E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene40212 | 0.833852 | 4.20E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene40212 | 0.816184 | 6.30E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene40212 | 0.834429 | 3.01E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene40212 | 0.835675 | 1.46E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene40212 | 0.838356 | 3.02E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene40212 | 0.838573 | 2.65E-57 | -1.69E-46 |
| MS.gene054955 | MS.gene40212 | 0.822002 | 2.99E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene40212 | 0.868917 | 4.57E-66 | -1.69E-46 |
| MS.gene055116 | MS.gene40212 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene40212 | 0.850508 | 1.62E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene40212 | 0.808347 | 3.24E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene40212 | 0.810214 | 1.29E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene40212 | 0.860868 | 1.53E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene40212 | 0.812788 | 3.56E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene40212 | 0.843561 | 1.30E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene40212 | 0.853312 | 2.60E-61 | -1.69E-46 |
| MS.gene055412 | MS.gene40212 | 0.900716 | 5.55E-78 | -1.69E-46 |
| MS.gene055422 | MS.gene40212 | 0.831036 | 2.10E-55 | -1.69E-46 |
| MS.gene055428 | MS.gene40212 | 0.829326 | 5.48E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene40212 | 0.831595 | 1.53E-55 | -1.69E-46 |
| MS.gene055633 | MS.gene40212 | 0.855128 | 7.76E-62 | -1.69E-46 |
| MS.gene055636 | MS.gene40212 | 0.825839 | 3.77E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene40212 | 0.865635 | 5.12E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene40212 | 0.859039 | 5.45E-63 | -1.69E-46 |
| MS.gene055896 | MS.gene40212 | 0.825706 | 4.05E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene40212 | 0.885623 | 6.93E-72 | -1.69E-46 |
| MS.gene055930 | MS.gene40212 | 0.802601 | 5.19E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene40212 | 0.833889 | 4.12E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene40212 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene40212 | 0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene40212 | 0.85958 | 3.75E-63 | -1.69E-46 |
| MS.gene056407 | MS.gene40212 | 0.854006 | 1.64E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene40212 | 0.840945 | 6.40E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene40212 | 0.82644 | 2.71E-54 | -1.69E-46 |
| MS.gene056448 | MS.gene40212 | 0.808065 | 3.72E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene40212 | 0.8623 | 5.59E-64 | -1.69E-46 |
| MS.gene056549 | MS.gene40212 | 0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene40212 | 0.857414 | 1.66E-62 | -1.69E-46 |
| MS.gene056657 | MS.gene40212 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene40212 | 0.827076 | 1.91E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene40212 | 0.885023 | 1.16E-71 | -1.69E-46 |
| MS.gene057011 | MS.gene40212 | 0.920129 | 1.89E-87 | -1.69E-46 |
| MS.gene057123 | MS.gene40212 | 0.85066 | 1.47E-60 | -1.69E-46 |
| MS.gene057124 | MS.gene40212 | 0.830224 | 3.31E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene40212 | 0.883586 | 3.96E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene40212 | 0.871684 | 5.66E-67 | -1.69E-46 |
| MS.gene057285 | MS.gene40212 | 0.842512 | 2.47E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene40212 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene057331 | MS.gene40212 | 0.847576 | 1.06E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene40212 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene40212 | 0.857646 | 1.42E-62 | -1.69E-46 |
| MS.gene057416 | MS.gene40212 | 0.874637 | 5.78E-68 | -1.69E-46 |
| MS.gene057448 | MS.gene40212 | 0.83272 | 8.04E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene40212 | 0.835557 | 1.57E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene40212 | 0.841986 | 3.41E-58 | -1.69E-46 |
| MS.gene057734 | MS.gene40212 | 0.805983 | 1.03E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene40212 | 0.802833 | 4.65E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene40212 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene40212 | 0.809355 | 1.97E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene40212 | 0.845289 | 4.46E-59 | -1.69E-46 |
| MS.gene057927 | MS.gene40212 | 0.814716 | 1.34E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene40212 | 0.827573 | 1.45E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene40212 | 0.845146 | 4.87E-59 | -1.69E-46 |
| MS.gene058007 | MS.gene40212 | 0.818759 | 1.66E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene40212 | 0.840873 | 6.69E-58 | -1.69E-46 |
| MS.gene058082 | MS.gene40212 | 0.820187 | 7.83E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene40212 | 0.83122 | 1.89E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene40212 | 0.810352 | 1.20E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene40212 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene40212 | 0.890269 | 1.15E-73 | -1.69E-46 |
| MS.gene058323 | MS.gene40212 | 0.858096 | 1.04E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene40212 | 0.846909 | 1.62E-59 | -1.69E-46 |
| MS.gene058376 | MS.gene40212 | 0.802358 | 5.83E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene40212 | 0.805046 | 1.61E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene40212 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene40212 | 0.888941 | 3.78E-73 | -1.69E-46 |
| MS.gene058700 | MS.gene40212 | 0.808505 | 3.00E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene40212 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene058790 | MS.gene40212 | 0.805731 | 1.16E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene40212 | 0.8338 | 4.33E-56 | -1.69E-46 |
| MS.gene058948 | MS.gene40212 | 0.801419 | 9.09E-49 | -1.69E-46 |
| MS.gene058993 | MS.gene40212 | 0.809126 | 2.21E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene40212 | 0.816982 | 4.18E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene40212 | 0.855674 | 5.38E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene40212 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene40212 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene40212 | 0.846058 | 2.76E-59 | -1.69E-46 |
| MS.gene059366 | MS.gene40212 | 0.82579 | 3.87E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene40212 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene40212 | 0.875349 | 3.30E-68 | -1.69E-46 |
| MS.gene059597 | MS.gene40212 | 0.882509 | 9.81E-71 | -1.69E-46 |
| MS.gene05959 | MS.gene40212 | 0.848145 | 7.39E-60 | -1.69E-46 |
| MS.gene059674 | MS.gene40212 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene40212 | 0.895447 | 9.50E-76 | -1.69E-46 |
| MS.gene059688 | MS.gene40212 | 0.902914 | 5.95E-79 | -1.69E-46 |
| MS.gene059692 | MS.gene40212 | 0.893093 | 8.66E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene40212 | 0.892561 | 1.42E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene40212 | 0.855665 | 5.42E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene40212 | 0.881699 | 1.93E-70 | -1.69E-46 |
| MS.gene059718 | MS.gene40212 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene40212 | 0.821482 | 3.94E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene40212 | 0.814479 | 1.51E-51 | -1.69E-46 |
| MS.gene05986 | MS.gene40212 | 0.819526 | 1.11E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene40212 | 0.829589 | 4.73E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene40212 | 0.811957 | 5.40E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene40212 | 0.890092 | 1.35E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene40212 | 0.85611 | 4.02E-62 | -1.69E-46 |
| MS.gene060356 | MS.gene40212 | 0.812879 | 3.40E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene40212 | 0.857795 | 1.28E-62 | -1.69E-46 |
| MS.gene060482 | MS.gene40212 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene060569 | MS.gene40212 | 0.82449 | 7.85E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene40212 | 0.907601 | 4.25E-81 | -1.69E-46 |
| MS.gene060818 | MS.gene40212 | 0.892383 | 1.67E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene40212 | 0.806683 | 7.30E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene40212 | 0.898107 | 7.33E-77 | -1.69E-46 |
| MS.gene06092 | MS.gene40212 | 0.845273 | 4.50E-59 | -1.69E-46 |
| MS.gene060986 | MS.gene40212 | 0.828988 | 6.62E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene40212 | 0.856517 | 3.05E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene40212 | 0.815893 | 7.32E-52 | -1.69E-46 |
| MS.gene061051 | MS.gene40212 | -0.880865 | 3.86E-70 | -1.69E-46 |
| MS.gene061134 | MS.gene40212 | 0.81488 | 1.23E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene40212 | 0.824744 | 6.84E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene40212 | 0.892915 | 1.02E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40212.t1 | MTR_3g111190 | 98.493 | 531 | 8 | 0 | 1 | 531 | 1 | 531 | 0.0 | 1072 |
| MS.gene40212.t1 | MTR_3g111190 | 99.540 | 435 | 2 | 0 | 97 | 531 | 1 | 435 | 0.0 | 890 |
| MS.gene40212.t1 | MTR_5g067410 | 80.519 | 539 | 94 | 4 | 1 | 528 | 1 | 539 | 0.0 | 883 |
| MS.gene40212.t1 | MTR_4g092820 | 67.052 | 519 | 165 | 4 | 17 | 531 | 13 | 529 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40212.t1 | AT1G58290 | 76.330 | 545 | 113 | 5 | 1 | 531 | 1 | 543 | 0.0 | 828 |
| MS.gene40212.t1 | AT1G09940 | 73.840 | 539 | 120 | 9 | 1 | 528 | 1 | 529 | 0.0 | 788 |
| MS.gene40212.t1 | AT2G31250 | 62.626 | 495 | 169 | 7 | 35 | 525 | 38 | 520 | 0.0 | 612 |
Find 126 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTCATCTTTCATGAATAA+TGG | 0.203444 | 3.2:-88949271 | None:intergenic |
| TGGCAGCCACAACCTCTTTA+AGG | 0.223188 | 3.2:-88949420 | None:intergenic |
| ATGCAATAACTGTCGGAAAA+AGG | 0.258377 | 3.2:+88948924 | MS.gene40212:CDS |
| CACTTTCTCCGGTCCCAAAT+TGG | 0.259254 | 3.2:+88947539 | MS.gene40212:CDS |
| TGTTGGATCCATCTCACTTC+TGG | 0.271267 | 3.2:-88949840 | None:intergenic |
| AGAGACTGAAATATCTGTTT+TGG | 0.298449 | 3.2:+88949786 | MS.gene40212:CDS |
| CGTCATCTTTCATGAATAAT+GGG | 0.303979 | 3.2:-88949270 | None:intergenic |
| GAGGAATAGAGACTCCAATT+TGG | 0.305860 | 3.2:-88947553 | None:intergenic |
| ATGGTCCAATGCAACATTTA+AGG | 0.316246 | 3.2:+88949689 | MS.gene40212:CDS |
| TGTTCTCAAGGGTCTCAGTT+AGG | 0.318272 | 3.2:-88949735 | None:intergenic |
| CTCTTTGACACCACGGTGTT+GGG | 0.321524 | 3.2:-88948598 | None:intergenic |
| AGAACCACTTTCACTCAAAA+AGG | 0.332496 | 3.2:+88947630 | MS.gene40212:CDS |
| CCTCCAACATCTTGACTTGC+TGG | 0.341053 | 3.2:-88949307 | None:intergenic |
| GGTCTTGAGTCTCTTGTATT+GGG | 0.347849 | 3.2:+88948809 | MS.gene40212:CDS |
| ATATATCTCCATTCGGTTGC+AGG | 0.348244 | 3.2:-88948562 | None:intergenic |
| TGGTCTTGAGTCTCTTGTAT+TGG | 0.351928 | 3.2:+88948808 | MS.gene40212:CDS |
| AGGAATAGAGACTCCAATTT+GGG | 0.358382 | 3.2:-88947552 | None:intergenic |
| GCATTATCATGCGAGGCTTC+AGG | 0.359923 | 3.2:-88949025 | None:intergenic |
| AAAGCTGGTCATCAAACATT+TGG | 0.383472 | 3.2:+88949081 | MS.gene40212:CDS |
| GCTCTAGGCCATTCTGCTTC+CGG | 0.389081 | 3.2:-88948486 | None:intergenic |
| AGGAGCAGCATTGTCGTCAT+TGG | 0.397753 | 3.2:+88948414 | MS.gene40212:CDS |
| AGTTGAAACAATTTGAAGCT+TGG | 0.400753 | 3.2:+88949497 | MS.gene40212:CDS |
| CAAGAGAGCATTTCTGAAAG+AGG | 0.405927 | 3.2:-88949202 | None:intergenic |
| GAGCCTATGCTGAAAGGATC+AGG | 0.406263 | 3.2:+88949560 | MS.gene40212:CDS |
| GGACAAGGAGTTAACGGCTT+TGG | 0.406926 | 3.2:+88948875 | MS.gene40212:CDS |
| TGCTCGCAAAGCTCTGAAAC+AGG | 0.413070 | 3.2:-88948731 | None:intergenic |
| GTTCTCAAGGGTCTCAGTTA+GGG | 0.416753 | 3.2:-88949734 | None:intergenic |
| GCCGTTTCAACCACTTTCTC+CGG | 0.422111 | 3.2:+88947528 | MS.gene40212:CDS |
| CAGAATTCTGATCAAACTAA+TGG | 0.426228 | 3.2:+88947672 | MS.gene40212:CDS |
| AACTGATAAATGGGTGGGAA+TGG | 0.427322 | 3.2:-88947595 | None:intergenic |
| TCTAAGCCGATCCTCTTTGT+TGG | 0.438084 | 3.2:-88949440 | None:intergenic |
| GAGGAGCTCAAGAGCAGAGC+GGG | 0.452379 | 3.2:-88947706 | None:intergenic |
| GAACAGAAATGTCGATGAAA+AGG | 0.454173 | 3.2:-88949336 | None:intergenic |
| GCAGAGACTAATATTGCTGC+TGG | 0.454882 | 3.2:+88948953 | MS.gene40212:CDS |
| ATGGAAGCGCAGGCGATCAT+TGG | 0.455997 | 3.2:+88949469 | MS.gene40212:CDS |
| CAAGGGTCTCAGTTAGGGTT+CGG | 0.456916 | 3.2:-88949729 | None:intergenic |
| AGCTGTGGATGATCTTAGTC+GGG | 0.458876 | 3.2:+88949645 | MS.gene40212:CDS |
| GTTAAGCAAGTTGTCAAAGT+TGG | 0.466075 | 3.2:+88948854 | MS.gene40212:CDS |
| AAAGTTGGACAAGGAGTTAA+CGG | 0.467613 | 3.2:+88948869 | MS.gene40212:CDS |
| TGCTGAGCTTGAGAAATGCT+TGG | 0.471267 | 3.2:+88949585 | MS.gene40212:CDS |
| TATTCCTCAAATCTTCTTCG+AGG | 0.472515 | 3.2:+88947568 | MS.gene40212:CDS |
| TGAGAAATGCTTGGGTAAGA+TGG | 0.483561 | 3.2:+88949594 | MS.gene40212:CDS |
| TTAGTCGGGGTATTGTGAAT+AGG | 0.483898 | 3.2:+88949659 | MS.gene40212:CDS |
| TGAAGCTTGGAGAGACTCGC+TGG | 0.485909 | 3.2:+88949510 | MS.gene40212:CDS |
| GAGTTCAGCTGCCGTGGAGT+TGG | 0.487465 | 3.2:+88948988 | MS.gene40212:CDS |
| ATCAAACATTTGGTTTCGAA+AGG | 0.487528 | 3.2:+88949091 | MS.gene40212:CDS |
| GGAGCAGCATTGTCGTCATT+GGG | 0.488441 | 3.2:+88948415 | MS.gene40212:CDS |
| GGCTTTGGAAGAAACATTAG+TGG | 0.489386 | 3.2:+88948890 | MS.gene40212:CDS |
| TTCTGTGAGTTCAGCTGCCG+TGG | 0.490671 | 3.2:+88948982 | MS.gene40212:CDS |
| CAATGTTGATGACCTTAAAG+AGG | 0.492073 | 3.2:+88949408 | MS.gene40212:CDS |
| TTTCAGAGCTTTGCGAGCAC+CGG | 0.496728 | 3.2:+88948735 | MS.gene40212:CDS |
| AGGATGCTGATTATCGGTGC+TGG | 0.497285 | 3.2:+88949049 | MS.gene40212:CDS |
| TGCTGGGAAGATGGGAAAGC+TGG | 0.498604 | 3.2:+88949066 | MS.gene40212:CDS |
| GATTATCGGTGCTGGGAAGA+TGG | 0.501802 | 3.2:+88949057 | MS.gene40212:CDS |
| TCAAAGCATGCATGTTCTCA+AGG | 0.503890 | 3.2:-88949747 | None:intergenic |
| CCTCTTTGACACCACGGTGT+TGG | 0.505749 | 3.2:-88948599 | None:intergenic |
| ATTGTGAATAGGATGCTTCA+TGG | 0.507796 | 3.2:+88949670 | MS.gene40212:CDS |
| TCACACCTTAAATGTTGCAT+TGG | 0.511482 | 3.2:-88949694 | None:intergenic |
| ATTTCTGTTCCTCGAAATGT+TGG | 0.512769 | 3.2:+88949349 | MS.gene40212:CDS |
| CTCAAGAGCAGAGCGGGTGG+TGG | 0.514014 | 3.2:-88947700 | None:intergenic |
| ATTATCGGTGCTGGGAAGAT+GGG | 0.517250 | 3.2:+88949058 | MS.gene40212:CDS |
| GAGTCTCTTGTATTGGGAGA+AGG | 0.518033 | 3.2:+88948815 | MS.gene40212:CDS |
| TTCGAAAGGTTGCACAAGGA+TGG | 0.522727 | 3.2:+88949105 | MS.gene40212:CDS |
| GCTGAGCTTGAGAAATGCTT+GGG | 0.524284 | 3.2:+88949586 | MS.gene40212:CDS |
| ATGCAACATTTAAGGTGTGA+TGG | 0.525826 | 3.2:+88949697 | MS.gene40212:CDS |
| CAGAGACTAATATTGCTGCT+GGG | 0.527457 | 3.2:+88948954 | MS.gene40212:CDS |
| AATGCCAGGATGCTGATTAT+CGG | 0.528010 | 3.2:+88949043 | MS.gene40212:CDS |
| ACACATGAACCAACATTTCG+AGG | 0.528910 | 3.2:-88949358 | None:intergenic |
| AGAAGGTCAAATTCTTGCAC+AGG | 0.531198 | 3.2:+88948832 | MS.gene40212:CDS |
| ACCGGAGAAAGTGGTTGAAA+CGG | 0.531801 | 3.2:-88947529 | None:intergenic |
| AAGCTGTGGATGATCTTAGT+CGG | 0.534663 | 3.2:+88949644 | MS.gene40212:CDS |
| GGAGCAGAAAGTTCGAGCTA+AGG | 0.538367 | 3.2:+88949807 | MS.gene40212:CDS |
| GCTCAGTGTGCACACTGCTC+CGG | 0.539155 | 3.2:+88948437 | MS.gene40212:CDS |
| TAGAAAAGCAATGGAAGCGC+AGG | 0.539856 | 3.2:+88949459 | MS.gene40212:CDS |
| TGCAACATTTAAGGTGTGAT+GGG | 0.541340 | 3.2:+88949698 | MS.gene40212:CDS |
| CAATTTGGGACCGGAGAAAG+TGG | 0.542238 | 3.2:-88947538 | None:intergenic |
| CCGTGGTGTCAAAGAGGTCA+TGG | 0.542278 | 3.2:+88948605 | MS.gene40212:CDS |
| TTGTGTTTCTGAAGCAGATG+TGG | 0.542350 | 3.2:+88949222 | MS.gene40212:CDS |
| AAGCCTCGCATGATAATGCC+AGG | 0.544469 | 3.2:+88949029 | MS.gene40212:CDS |
| TTCAAGCATGCAATAACTGT+CGG | 0.546104 | 3.2:+88948917 | MS.gene40212:CDS |
| GGCTTCAGGTAGCTTCATAT+AGG | 0.552546 | 3.2:-88949011 | None:intergenic |
| AAACAGATATTTCAGTCTCT+AGG | 0.555709 | 3.2:-88949783 | None:intergenic |
| CATCTTGACTTGCTGGAGGA+AGG | 0.557482 | 3.2:-88949300 | None:intergenic |
| TAGAGACTCCAATTTGGGAC+CGG | 0.563889 | 3.2:-88947547 | None:intergenic |
| AGCACCGATAATCAGCATCC+TGG | 0.566229 | 3.2:-88949047 | None:intergenic |
| GGATGCTGATTATCGGTGCT+GGG | 0.570581 | 3.2:+88949050 | MS.gene40212:CDS |
| AATTGAGAGCCTATGCTGAA+AGG | 0.571766 | 3.2:+88949554 | MS.gene40212:CDS |
| CAAAGCATGCATGTTCTCAA+GGG | 0.572276 | 3.2:-88949746 | None:intergenic |
| TGATGACCTTAAAGAGGTTG+TGG | 0.573814 | 3.2:+88949414 | MS.gene40212:CDS |
| ATAGCCTCGAAGAAGATTTG+AGG | 0.575042 | 3.2:-88947572 | None:intergenic |
| AGGCCATTCTGCTTCCGGAA+TGG | 0.575247 | 3.2:-88948481 | None:intergenic |
| AAAGAAGACGCGGAAAGCTG+TGG | 0.575501 | 3.2:+88949630 | MS.gene40212:CDS |
| CGACGACATATATCTCCATT+CGG | 0.575634 | 3.2:-88948569 | None:intergenic |
| GAGCTCAAGAGCAGAGCGGG+TGG | 0.576022 | 3.2:-88947703 | None:intergenic |
| TTGCCATTCCGGAAGCAGAA+TGG | 0.576827 | 3.2:+88948478 | MS.gene40212:CDS |
| GCAGAAAGTTCGAGCTAAGG+TGG | 0.577492 | 3.2:+88949810 | MS.gene40212:CDS |
| CCAGCAAGTCAAGATGTTGG+AGG | 0.577979 | 3.2:+88949307 | MS.gene40212:CDS |
| CACAACTCTGCAATAGCTCT+AGG | 0.584214 | 3.2:-88948501 | None:intergenic |
| GGATCGGCTTAGAAAAGCAA+TGG | 0.585302 | 3.2:+88949450 | MS.gene40212:CDS |
| GAGAAATGCTTGGGTAAGAT+GGG | 0.585895 | 3.2:+88949595 | MS.gene40212:CDS |
| TGCAATACGCGAAGAACTGA+AGG | 0.590760 | 3.2:+88949159 | MS.gene40212:CDS |
| TCTGAGCACCTGCAACCGAA+TGG | 0.593474 | 3.2:+88948554 | MS.gene40212:CDS |
| AACCCTGATCCTTTCAGCAT+AGG | 0.597458 | 3.2:-88949563 | None:intergenic |
| AGAGACTAATATTGCTGCTG+GGG | 0.599145 | 3.2:+88948955 | MS.gene40212:CDS |
| TATTGCAGCAACTCTCTCCT+CGG | 0.599628 | 3.2:-88949143 | None:intergenic |
| CAAGTTGTCAAAGTTGGACA+AGG | 0.600402 | 3.2:+88948860 | MS.gene40212:CDS |
| CCTCCAGCAAGTCAAGATGT+TGG | 0.604438 | 3.2:+88949304 | MS.gene40212:CDS |
| TGGTTTCGAAAGGTTGCACA+AGG | 0.613006 | 3.2:+88949101 | MS.gene40212:CDS |
| AAATGTCGATGAAAAGGCGA+AGG | 0.620011 | 3.2:-88949330 | None:intergenic |
| TGGCTGCCAACAAAGAGGAT+CGG | 0.623928 | 3.2:+88949434 | MS.gene40212:CDS |
| CCAACACCGTGGTGTCAAAG+AGG | 0.625380 | 3.2:+88948599 | MS.gene40212:CDS |
| AGCCTATGCTGAAAGGATCA+GGG | 0.627363 | 3.2:+88949561 | MS.gene40212:CDS |
| GCAAAGCTCTGAAACAGGAA+CGG | 0.637910 | 3.2:-88948726 | None:intergenic |
| TAACAGGGTACACAAAGGAA+AGG | 0.638046 | 3.2:+88948394 | MS.gene40212:intron |
| GTGTCAAAGAGGTCATGGAA+TGG | 0.647540 | 3.2:+88948610 | MS.gene40212:CDS |
| CATCCTGGCATTATCATGCG+AGG | 0.650328 | 3.2:-88949032 | None:intergenic |
| CCATGACCTCTTTGACACCA+CGG | 0.651376 | 3.2:-88948605 | None:intergenic |
| GGTTGTGGCTGCCAACAAAG+AGG | 0.659117 | 3.2:+88949429 | MS.gene40212:CDS |
| CCAACATCTTGACTTGCTGG+AGG | 0.669581 | 3.2:-88949304 | None:intergenic |
| AACTTTAACAGGGTACACAA+AGG | 0.670584 | 3.2:+88948389 | MS.gene40212:intron |
| CTTCATATAGGCCAACTCCA+CGG | 0.687445 | 3.2:-88948999 | None:intergenic |
| ATGATATCTCAAAGAAGACG+CGG | 0.701193 | 3.2:+88949620 | MS.gene40212:CDS |
| TGAGGAGCTCAAGAGCAGAG+CGG | 0.706671 | 3.2:-88947707 | None:intergenic |
| GCTGTGGATGATCTTAGTCG+GGG | 0.710260 | 3.2:+88949646 | MS.gene40212:CDS |
| GGTTGTTGTCAATAGAACCG+AGG | 0.729846 | 3.2:+88949126 | MS.gene40212:CDS |
| GTCGCTCTATCCCAACACCG+TGG | 0.769259 | 3.2:+88948588 | MS.gene40212:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATGTTTAATCAAACAA+AGG | - | chr3.2:88947807-88947826 | None:intergenic | 15.0% |
| !! | TTATACAATTAACTTTAACA+GGG | + | chr3.2:88948379-88948398 | MS.gene40212:intron | 15.0% |
| !! | TTTATACAATTAACTTTAAC+AGG | + | chr3.2:88948378-88948397 | MS.gene40212:intron | 15.0% |
| !! | TTTCATAGTATTCACTATAA+AGG | + | chr3.2:88948055-88948074 | MS.gene40212:intron | 20.0% |
| !!! | TCTGAAAGTATATAATCTTT+TGG | + | chr3.2:88947940-88947959 | MS.gene40212:intron | 20.0% |
| ! | AACCATATAACAAACAGAAA+AGG | - | chr3.2:88948160-88948179 | None:intergenic | 25.0% |
| ! | CTTGAATACAATTAATCATC+TGG | - | chr3.2:88947983-88948002 | None:intergenic | 25.0% |
| ! | TCTCTAAACATATGGATTTA+AGG | + | chr3.2:88947854-88947873 | MS.gene40212:intron | 25.0% |
| ! | TGAAAAAAAAACATGTTTCC+TGG | - | chr3.2:88948040-88948059 | None:intergenic | 25.0% |
| ! | TGTTGTTATCTCTAAACATA+TGG | + | chr3.2:88947846-88947865 | MS.gene40212:intron | 25.0% |
| ! | TTTAATGTATCTGTTCTCTT+TGG | + | chr3.2:88948693-88948712 | MS.gene40212:intron | 25.0% |
| ! | TTTACCAAAAGAAAGAAAGA+CGG | + | chr3.2:88948292-88948311 | MS.gene40212:intron | 25.0% |
| ! | TTTCCCAAAAACTGATAAAT+GGG | - | chr3.2:88947607-88947626 | None:intergenic | 25.0% |
| !! | CTTTGTTGTAAAGTAAAAAC+CGG | - | chr3.2:88948757-88948776 | None:intergenic | 25.0% |
| !! | GAGTTTGTTTAATTCACTTA+AGG | + | chr3.2:88948130-88948149 | MS.gene40212:intron | 25.0% |
| !!! | ATCCTTTTCTGTTTGTTATA+TGG | + | chr3.2:88948155-88948174 | MS.gene40212:intron | 25.0% |
| !!! | GCTCTCAATTTTTTTATAGT+AGG | - | chr3.2:88949544-88949563 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTGTTATATGGTT+CGG | + | chr3.2:88948160-88948179 | MS.gene40212:intron | 25.0% |
| AAACAGATATTTCAGTCTCT+AGG | - | chr3.2:88949786-88949805 | None:intergenic | 30.0% | |
| AAACATGTTTCCTGGTAAAT+AGG | - | chr3.2:88948032-88948051 | None:intergenic | 30.0% | |
| AACAACAAATTAAGACAGAG+AGG | - | chr3.2:88947833-88947852 | None:intergenic | 30.0% | |
| AACATGTTTCCTGGTAAATA+GGG | - | chr3.2:88948031-88948050 | None:intergenic | 30.0% | |
| ACAACAAATTAAGACAGAGA+GGG | - | chr3.2:88947832-88947851 | None:intergenic | 30.0% | |
| ACGTCATCTTTCATGAATAA+TGG | - | chr3.2:88949274-88949293 | None:intergenic | 30.0% | |
| ATGAAAGACGAATTCAATTC+AGG | - | chr3.2:88947771-88947790 | None:intergenic | 30.0% | |
| ATGCACGACAAATATGATTT+AGG | - | chr3.2:88948664-88948683 | None:intergenic | 30.0% | |
| CAGAATTCTGATCAAACTAA+TGG | + | chr3.2:88947672-88947691 | MS.gene40212:CDS | 30.0% | |
| CGTCATCTTTCATGAATAAT+GGG | - | chr3.2:88949273-88949292 | None:intergenic | 30.0% | |
| GTTTCCCAAAAACTGATAAA+TGG | - | chr3.2:88947608-88947627 | None:intergenic | 30.0% | |
| TACTTGAAAAAGATGTTGTG+TGG | - | chr3.2:88948783-88948802 | None:intergenic | 30.0% | |
| TGAAAGACGAATTCAATTCA+GGG | - | chr3.2:88947770-88947789 | None:intergenic | 30.0% | |
| TTACCAAAAGAAAGAAAGAC+GGG | + | chr3.2:88948293-88948312 | MS.gene40212:intron | 30.0% | |
| ! | AGAGACTGAAATATCTGTTT+TGG | + | chr3.2:88949786-88949805 | MS.gene40212:CDS | 30.0% |
| ! | AGTTGAAACAATTTGAAGCT+TGG | + | chr3.2:88949497-88949516 | MS.gene40212:CDS | 30.0% |
| ! | ATCAAACATTTGGTTTCGAA+AGG | + | chr3.2:88949091-88949110 | MS.gene40212:CDS | 30.0% |
| !! | TCCAAAGATTTGAAGCTTTT+GGG | + | chr3.2:88948224-88948243 | MS.gene40212:intron | 30.0% |
| !! | TTCCAAAGATTTGAAGCTTT+TGG | + | chr3.2:88948223-88948242 | MS.gene40212:intron | 30.0% |
| !!! | AATTCCTTTTTGAGTGAAAG+TGG | - | chr3.2:88947637-88947656 | None:intergenic | 30.0% |
| AAAGCTGGTCATCAAACATT+TGG | + | chr3.2:88949081-88949100 | MS.gene40212:CDS | 35.0% | |
| AAAGTTGGACAAGGAGTTAA+CGG | + | chr3.2:88948869-88948888 | MS.gene40212:CDS | 35.0% | |
| AACTTTAACAGGGTACACAA+AGG | + | chr3.2:88948389-88948408 | MS.gene40212:intron | 35.0% | |
| AGAACCACTTTCACTCAAAA+AGG | + | chr3.2:88947630-88947649 | MS.gene40212:CDS | 35.0% | |
| AGGAATAGAGACTCCAATTT+GGG | - | chr3.2:88947555-88947574 | None:intergenic | 35.0% | |
| ATGATATCTCAAAGAAGACG+CGG | + | chr3.2:88949620-88949639 | MS.gene40212:CDS | 35.0% | |
| ATGCAATAACTGTCGGAAAA+AGG | + | chr3.2:88948924-88948943 | MS.gene40212:CDS | 35.0% | |
| ATGGTCCAATGCAACATTTA+AGG | + | chr3.2:88949689-88949708 | MS.gene40212:CDS | 35.0% | |
| ATTGTGAATAGGATGCTTCA+TGG | + | chr3.2:88949670-88949689 | MS.gene40212:CDS | 35.0% | |
| ATTTCTGTTCCTCGAAATGT+TGG | + | chr3.2:88949349-88949368 | MS.gene40212:CDS | 35.0% | |
| CCAAAAACTGATAAATGGGT+GGG | - | chr3.2:88947603-88947622 | None:intergenic | 35.0% | |
| GAACAGAAATGTCGATGAAA+AGG | - | chr3.2:88949339-88949358 | None:intergenic | 35.0% | |
| GTTAAGCAAGTTGTCAAAGT+TGG | + | chr3.2:88948854-88948873 | MS.gene40212:CDS | 35.0% | |
| TATTCCTCAAATCTTCTTCG+AGG | + | chr3.2:88947568-88947587 | MS.gene40212:CDS | 35.0% | |
| TCACACCTTAAATGTTGCAT+TGG | - | chr3.2:88949697-88949716 | None:intergenic | 35.0% | |
| TCCCAAAAGCTTCAAATCTT+TGG | - | chr3.2:88948228-88948247 | None:intergenic | 35.0% | |
| TGCAATAACTGTCGGAAAAA+GGG | + | chr3.2:88948925-88948944 | MS.gene40212:CDS | 35.0% | |
| TTCAAGCATGCAATAACTGT+CGG | + | chr3.2:88948917-88948936 | MS.gene40212:CDS | 35.0% | |
| ! | AATCCCGTCTTTCTTTCTTT+TGG | - | chr3.2:88948299-88948318 | None:intergenic | 35.0% |
| ! | AGTTTTTCACGCATTTCTAC+CGG | - | chr3.2:88948459-88948478 | None:intergenic | 35.0% |
| ! | ATGCAACATTTAAGGTGTGA+TGG | + | chr3.2:88949697-88949716 | MS.gene40212:CDS | 35.0% |
| ! | CCACCCATTTATCAGTTTTT+GGG | + | chr3.2:88947601-88947620 | MS.gene40212:CDS | 35.0% |
| ! | CTTTTGGTAAATAACCCTCT+AGG | - | chr3.2:88948283-88948302 | None:intergenic | 35.0% |
| ! | TGCAACATTTAAGGTGTGAT+GGG | + | chr3.2:88949698-88949717 | MS.gene40212:CDS | 35.0% |
| !! | CAATGTTGATGACCTTAAAG+AGG | + | chr3.2:88949408-88949427 | MS.gene40212:CDS | 35.0% |
| !! | TTTTGAGTGAAAGTGGTTCT+GGG | - | chr3.2:88947630-88947649 | None:intergenic | 35.0% |
| !!! | CATCTTTTTCAAGTATCAGC+TGG | + | chr3.2:88948788-88948807 | MS.gene40212:CDS | 35.0% |
| !!! | TTTTTGAGTGAAAGTGGTTC+TGG | - | chr3.2:88947631-88947650 | None:intergenic | 35.0% |
| AAATGTCGATGAAAAGGCGA+AGG | - | chr3.2:88949333-88949352 | None:intergenic | 40.0% | |
| AACTGATAAATGGGTGGGAA+TGG | - | chr3.2:88947598-88947617 | None:intergenic | 40.0% | |
| AAGCTGTGGATGATCTTAGT+CGG | + | chr3.2:88949644-88949663 | MS.gene40212:CDS | 40.0% | |
| AATTGAGAGCCTATGCTGAA+AGG | + | chr3.2:88949554-88949573 | MS.gene40212:CDS | 40.0% | |
| ACACATGAACCAACATTTCG+AGG | - | chr3.2:88949361-88949380 | None:intergenic | 40.0% | |
| AGAAGGTCAAATTCTTGCAC+AGG | + | chr3.2:88948832-88948851 | MS.gene40212:CDS | 40.0% | |
| AGAGACTAATATTGCTGCTG+GGG | + | chr3.2:88948955-88948974 | MS.gene40212:CDS | 40.0% | |
| ATAGCCTCGAAGAAGATTTG+AGG | - | chr3.2:88947575-88947594 | None:intergenic | 40.0% | |
| ATATATCTCCATTCGGTTGC+AGG | - | chr3.2:88948565-88948584 | None:intergenic | 40.0% | |
| CAAAGCATGCATGTTCTCAA+GGG | - | chr3.2:88949749-88949768 | None:intergenic | 40.0% | |
| CAAGTTGTCAAAGTTGGACA+AGG | + | chr3.2:88948860-88948879 | MS.gene40212:CDS | 40.0% | |
| CAGAGACTAATATTGCTGCT+GGG | + | chr3.2:88948954-88948973 | MS.gene40212:CDS | 40.0% | |
| CCCAAAAACTGATAAATGGG+TGG | - | chr3.2:88947604-88947623 | None:intergenic | 40.0% | |
| CGACGACATATATCTCCATT+CGG | - | chr3.2:88948572-88948591 | None:intergenic | 40.0% | |
| GAGAAATGCTTGGGTAAGAT+GGG | + | chr3.2:88949595-88949614 | MS.gene40212:CDS | 40.0% | |
| GAGGAATAGAGACTCCAATT+TGG | - | chr3.2:88947556-88947575 | None:intergenic | 40.0% | |
| GGTCTTGAGTCTCTTGTATT+GGG | + | chr3.2:88948809-88948828 | MS.gene40212:CDS | 40.0% | |
| TAACAGGGTACACAAAGGAA+AGG | + | chr3.2:88948394-88948413 | MS.gene40212:intron | 40.0% | |
| TCAAAGCATGCATGTTCTCA+AGG | - | chr3.2:88949750-88949769 | None:intergenic | 40.0% | |
| TGAGAAATGCTTGGGTAAGA+TGG | + | chr3.2:88949594-88949613 | MS.gene40212:CDS | 40.0% | |
| TGATGACCTTAAAGAGGTTG+TGG | + | chr3.2:88949414-88949433 | MS.gene40212:CDS | 40.0% | |
| ! | AATGCCAGGATGCTGATTAT+CGG | + | chr3.2:88949043-88949062 | MS.gene40212:CDS | 40.0% |
| ! | CCCACCCATTTATCAGTTTT+TGG | + | chr3.2:88947600-88947619 | MS.gene40212:CDS | 40.0% |
| ! | CGGGATTGCATGTTTTTCAT+TGG | + | chr3.2:88948312-88948331 | MS.gene40212:intron | 40.0% |
| ! | TATCAGCTGCAGAAGTTTTG+AGG | - | chr3.2:88947728-88947747 | None:intergenic | 40.0% |
| ! | TGGTCTTGAGTCTCTTGTAT+TGG | + | chr3.2:88948808-88948827 | MS.gene40212:CDS | 40.0% |
| !! | CAAGAGAGCATTTCTGAAAG+AGG | - | chr3.2:88949205-88949224 | None:intergenic | 40.0% |
| !! | GGCTTTGGAAGAAACATTAG+TGG | + | chr3.2:88948890-88948909 | MS.gene40212:CDS | 40.0% |
| !! | TTAGTCGGGGTATTGTGAAT+AGG | + | chr3.2:88949659-88949678 | MS.gene40212:CDS | 40.0% |
| !! | TTGTGTTTCTGAAGCAGATG+TGG | + | chr3.2:88949222-88949241 | MS.gene40212:CDS | 40.0% |
| AACCCTGATCCTTTCAGCAT+AGG | - | chr3.2:88949566-88949585 | None:intergenic | 45.0% | |
| ACCGGAGAAAGTGGTTGAAA+CGG | - | chr3.2:88947532-88947551 | None:intergenic | 45.0% | |
| AGCCTATGCTGAAAGGATCA+GGG | + | chr3.2:88949561-88949580 | MS.gene40212:CDS | 45.0% | |
| AGCTGTGGATGATCTTAGTC+GGG | + | chr3.2:88949645-88949664 | MS.gene40212:CDS | 45.0% | |
| ATTGCAGCACCCTATTTACC+AGG | + | chr3.2:88948019-88948038 | MS.gene40212:intron | 45.0% | |
| CACAACTCTGCAATAGCTCT+AGG | - | chr3.2:88948504-88948523 | None:intergenic | 45.0% | |
| CAGAGATAAAGTGCAGTAGC+AGG | - | chr3.2:88947924-88947943 | None:intergenic | 45.0% | |
| CTTCATATAGGCCAACTCCA+CGG | - | chr3.2:88949002-88949021 | None:intergenic | 45.0% | |
| GAGTCTCTTGTATTGGGAGA+AGG | + | chr3.2:88948815-88948834 | MS.gene40212:CDS | 45.0% | |
| GCAGAGACTAATATTGCTGC+TGG | + | chr3.2:88948953-88948972 | MS.gene40212:CDS | 45.0% | |
| GCGTGAAAAACTTGCCATTC+CGG | + | chr3.2:88948467-88948486 | MS.gene40212:CDS | 45.0% | |
| GCTGAGCTTGAGAAATGCTT+GGG | + | chr3.2:88949586-88949605 | MS.gene40212:CDS | 45.0% | |
| GGCTTCAGGTAGCTTCATAT+AGG | - | chr3.2:88949014-88949033 | None:intergenic | 45.0% | |
| GGTTGTTGTCAATAGAACCG+AGG | + | chr3.2:88949126-88949145 | MS.gene40212:CDS | 45.0% | |
| GTGTCAAAGAGGTCATGGAA+TGG | + | chr3.2:88948610-88948629 | MS.gene40212:CDS | 45.0% | |
| GTTCTCAAGGGTCTCAGTTA+GGG | - | chr3.2:88949737-88949756 | None:intergenic | 45.0% | |
| TATTGCAGCAACTCTCTCCT+CGG | - | chr3.2:88949146-88949165 | None:intergenic | 45.0% | |
| TCTAAGCCGATCCTCTTTGT+TGG | - | chr3.2:88949443-88949462 | None:intergenic | 45.0% | |
| TGCAATACGCGAAGAACTGA+AGG | + | chr3.2:88949159-88949178 | MS.gene40212:CDS | 45.0% | |
| TGCTGAGCTTGAGAAATGCT+TGG | + | chr3.2:88949585-88949604 | MS.gene40212:CDS | 45.0% | |
| TGGTTTCGAAAGGTTGCACA+AGG | + | chr3.2:88949101-88949120 | MS.gene40212:CDS | 45.0% | |
| TGTTCTCAAGGGTCTCAGTT+AGG | - | chr3.2:88949738-88949757 | None:intergenic | 45.0% | |
| TTCGAAAGGTTGCACAAGGA+TGG | + | chr3.2:88949105-88949124 | MS.gene40212:CDS | 45.0% | |
| ! | GGATCGGCTTAGAAAAGCAA+TGG | + | chr3.2:88949450-88949469 | MS.gene40212:CDS | 45.0% |
| ! | GGTGATATCTAGAGCCTAGA+GGG | + | chr3.2:88948266-88948285 | MS.gene40212:intron | 45.0% |
| ! | TAGAAAAGCAATGGAAGCGC+AGG | + | chr3.2:88949459-88949478 | MS.gene40212:CDS | 45.0% |
| ! | TAGAGACTCCAATTTGGGAC+CGG | - | chr3.2:88947550-88947569 | None:intergenic | 45.0% |
| ! | TGGGTTTTCTGATGCTGTAC+TGG | - | chr3.2:88949254-88949273 | None:intergenic | 45.0% |
| ! | TGGTGATATCTAGAGCCTAG+AGG | + | chr3.2:88948265-88948284 | MS.gene40212:intron | 45.0% |
| !! | ATTATCGGTGCTGGGAAGAT+GGG | + | chr3.2:88949058-88949077 | MS.gene40212:CDS | 45.0% |
| !! | GCAAAGCTCTGAAACAGGAA+CGG | - | chr3.2:88948729-88948748 | None:intergenic | 45.0% |
| !!! | TTTGAAGCTTTTGGGACCTG+TGG | + | chr3.2:88948232-88948251 | MS.gene40212:intron | 45.0% |
| AAAGAAGACGCGGAAAGCTG+TGG | + | chr3.2:88949630-88949649 | MS.gene40212:CDS | 50.0% | |
| AGGAGCAGCATTGTCGTCAT+TGG | + | chr3.2:88948414-88948433 | MS.gene40212:CDS | 50.0% | |
| CAAGGGTCTCAGTTAGGGTT+CGG | - | chr3.2:88949732-88949751 | None:intergenic | 50.0% | |
| CACTTTCTCCGGTCCCAAAT+TGG | + | chr3.2:88947539-88947558 | MS.gene40212:CDS | 50.0% | |
| CATCCTGGCATTATCATGCG+AGG | - | chr3.2:88949035-88949054 | None:intergenic | 50.0% | |
| CCAGCAAGTCAAGATGTTGG+AGG | + | chr3.2:88949307-88949326 | MS.gene40212:CDS | 50.0% | |
| CCATGACCTCTTTGACACCA+CGG | - | chr3.2:88948608-88948627 | None:intergenic | 50.0% | |
| CCTCCAGCAAGTCAAGATGT+TGG | + | chr3.2:88949304-88949323 | MS.gene40212:CDS | 50.0% | |
| CTCTTTGACACCACGGTGTT+GGG | - | chr3.2:88948601-88948620 | None:intergenic | 50.0% | |
| GAGCCTATGCTGAAAGGATC+AGG | + | chr3.2:88949560-88949579 | MS.gene40212:CDS | 50.0% | |
| GCAGAAAGTTCGAGCTAAGG+TGG | + | chr3.2:88949810-88949829 | MS.gene40212:CDS | 50.0% | |
| GCATTATCATGCGAGGCTTC+AGG | - | chr3.2:88949028-88949047 | None:intergenic | 50.0% | |
| GCCGTTTCAACCACTTTCTC+CGG | + | chr3.2:88947528-88947547 | MS.gene40212:CDS | 50.0% | |
| GCTGTGGATGATCTTAGTCG+GGG | + | chr3.2:88949646-88949665 | MS.gene40212:CDS | 50.0% | |
| GGACAAGGAGTTAACGGCTT+TGG | + | chr3.2:88948875-88948894 | MS.gene40212:CDS | 50.0% | |
| GGAGCAGAAAGTTCGAGCTA+AGG | + | chr3.2:88949807-88949826 | MS.gene40212:CDS | 50.0% | |
| GGAGCAGCATTGTCGTCATT+GGG | + | chr3.2:88948415-88948434 | MS.gene40212:CDS | 50.0% | |
| TGGCAGCCACAACCTCTTTA+AGG | - | chr3.2:88949423-88949442 | None:intergenic | 50.0% | |
| TGGCTGCCAACAAAGAGGAT+CGG | + | chr3.2:88949434-88949453 | MS.gene40212:CDS | 50.0% | |
| TTGCCATTCCGGAAGCAGAA+TGG | + | chr3.2:88948478-88948497 | MS.gene40212:CDS | 50.0% | |
| TTTCAGAGCTTTGCGAGCAC+CGG | + | chr3.2:88948735-88948754 | MS.gene40212:CDS | 50.0% | |
| ! | AAGCCTCGCATGATAATGCC+AGG | + | chr3.2:88949029-88949048 | MS.gene40212:CDS | 50.0% |
| ! | AGGATGCTGATTATCGGTGC+TGG | + | chr3.2:88949049-88949068 | MS.gene40212:CDS | 50.0% |
| ! | CAATTTGGGACCGGAGAAAG+TGG | - | chr3.2:88947541-88947560 | None:intergenic | 50.0% |
| ! | GGATGCTGATTATCGGTGCT+GGG | + | chr3.2:88949050-88949069 | MS.gene40212:CDS | 50.0% |
| !! | AGCACCGATAATCAGCATCC+TGG | - | chr3.2:88949050-88949069 | None:intergenic | 50.0% |
| !! | CATCTTGACTTGCTGGAGGA+AGG | - | chr3.2:88949303-88949322 | None:intergenic | 50.0% |
| !! | CCAACATCTTGACTTGCTGG+AGG | - | chr3.2:88949307-88949326 | None:intergenic | 50.0% |
| !! | CCTCCAACATCTTGACTTGC+TGG | - | chr3.2:88949310-88949329 | None:intergenic | 50.0% |
| !! | GATTATCGGTGCTGGGAAGA+TGG | + | chr3.2:88949057-88949076 | MS.gene40212:CDS | 50.0% |
| !! | TGCTCGCAAAGCTCTGAAAC+AGG | - | chr3.2:88948734-88948753 | None:intergenic | 50.0% |
| !!! | CTTTTGGGACCTGTGGTTGA+CGG | + | chr3.2:88948239-88948258 | MS.gene40212:intron | 50.0% |
| AGGCCATTCTGCTTCCGGAA+TGG | - | chr3.2:88948484-88948503 | None:intergenic | 55.0% | |
| CCTCTTTGACACCACGGTGT+TGG | - | chr3.2:88948602-88948621 | None:intergenic | 55.0% | |
| GGTTGTGGCTGCCAACAAAG+AGG | + | chr3.2:88949429-88949448 | MS.gene40212:CDS | 55.0% | |
| TCACCACAACCGTCAACCAC+AGG | - | chr3.2:88948251-88948270 | None:intergenic | 55.0% | |
| TCTGAGCACCTGCAACCGAA+TGG | + | chr3.2:88948554-88948573 | MS.gene40212:CDS | 55.0% | |
| TGAAGCTTGGAGAGACTCGC+TGG | + | chr3.2:88949510-88949529 | MS.gene40212:CDS | 55.0% | |
| TGAGGAGCTCAAGAGCAGAG+CGG | - | chr3.2:88947710-88947729 | None:intergenic | 55.0% | |
| TGCTGGGAAGATGGGAAAGC+TGG | + | chr3.2:88949066-88949085 | MS.gene40212:CDS | 55.0% | |
| TTCTGTGAGTTCAGCTGCCG+TGG | + | chr3.2:88948982-88949001 | MS.gene40212:CDS | 55.0% | |
| ! | ATGGAAGCGCAGGCGATCAT+TGG | + | chr3.2:88949469-88949488 | MS.gene40212:CDS | 55.0% |
| ! | CCAACACCGTGGTGTCAAAG+AGG | + | chr3.2:88948599-88948618 | MS.gene40212:CDS | 55.0% |
| ! | CCGTGGTGTCAAAGAGGTCA+TGG | + | chr3.2:88948605-88948624 | MS.gene40212:CDS | 55.0% |
| ! | GCTCTAGGCCATTCTGCTTC+CGG | - | chr3.2:88948489-88948508 | None:intergenic | 55.0% |
| GAGGAGCTCAAGAGCAGAGC+GGG | - | chr3.2:88947709-88947728 | None:intergenic | 60.0% | |
| GAGTTCAGCTGCCGTGGAGT+TGG | + | chr3.2:88948988-88949007 | MS.gene40212:CDS | 60.0% | |
| GCTCAGTGTGCACACTGCTC+CGG | + | chr3.2:88948437-88948456 | MS.gene40212:CDS | 60.0% | |
| GGACCTGTGGTTGACGGTTG+TGG | + | chr3.2:88948245-88948264 | MS.gene40212:intron | 60.0% | |
| GTCGCTCTATCCCAACACCG+TGG | + | chr3.2:88948588-88948607 | MS.gene40212:CDS | 60.0% | |
| CTCAAGAGCAGAGCGGGTGG+TGG | - | chr3.2:88947703-88947722 | None:intergenic | 65.0% | |
| GAGCTCAAGAGCAGAGCGGG+TGG | - | chr3.2:88947706-88947725 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 88947525 | 88949849 | 88947525 | ID=MS.gene40212 |
| chr3.2 | mRNA | 88947525 | 88949849 | 88947525 | ID=MS.gene40212.t1;Parent=MS.gene40212 |
| chr3.2 | exon | 88947525 | 88947747 | 88947525 | ID=MS.gene40212.t1.exon1;Parent=MS.gene40212.t1 |
| chr3.2 | CDS | 88947525 | 88947747 | 88947525 | ID=cds.MS.gene40212.t1;Parent=MS.gene40212.t1 |
| chr3.2 | exon | 88948400 | 88948641 | 88948400 | ID=MS.gene40212.t1.exon2;Parent=MS.gene40212.t1 |
| chr3.2 | CDS | 88948400 | 88948641 | 88948400 | ID=cds.MS.gene40212.t1;Parent=MS.gene40212.t1 |
| chr3.2 | exon | 88948719 | 88949849 | 88948719 | ID=MS.gene40212.t1.exon3;Parent=MS.gene40212.t1 |
| chr3.2 | CDS | 88948719 | 88949849 | 88948719 | ID=cds.MS.gene40212.t1;Parent=MS.gene40212.t1 |
| Gene Sequence |
| Protein sequence |
