Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23137.t1 | XP_013450440.1 | 96 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 7.20E-129 | 469.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23137.t1 | O23403 | 71.4 | 217 | 57 | 3 | 35 | 247 | 72 | 287 | 1.6e-81 | 303.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23137.t1 | A0A072U5R2 | 96.0 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 5.2e-129 | 469.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049173 | MS.gene23137 | 0.806404 | 8.36E-50 | -1.69E-46 |
MS.gene049217 | MS.gene23137 | 0.822522 | 2.27E-53 | -1.69E-46 |
MS.gene049285 | MS.gene23137 | 0.830446 | 2.92E-55 | -1.69E-46 |
MS.gene049320 | MS.gene23137 | 0.822497 | 2.30E-53 | -1.69E-46 |
MS.gene049351 | MS.gene23137 | 0.817915 | 2.57E-52 | -1.69E-46 |
MS.gene049369 | MS.gene23137 | 0.805011 | 1.64E-49 | -1.69E-46 |
MS.gene049427 | MS.gene23137 | 0.860473 | 2.02E-63 | -1.69E-46 |
MS.gene049491 | MS.gene23137 | 0.831109 | 2.01E-55 | -1.69E-46 |
MS.gene049614 | MS.gene23137 | 0.886256 | 4.01E-72 | -1.69E-46 |
MS.gene049661 | MS.gene23137 | 0.832131 | 1.13E-55 | -1.69E-46 |
MS.gene049662 | MS.gene23137 | 0.825569 | 4.36E-54 | -1.69E-46 |
MS.gene049760 | MS.gene23137 | 0.816634 | 5.00E-52 | -1.69E-46 |
MS.gene049805 | MS.gene23137 | 0.82788 | 1.23E-54 | -1.69E-46 |
MS.gene049828 | MS.gene23137 | 0.82381 | 1.13E-53 | -1.69E-46 |
MS.gene050076 | MS.gene23137 | 0.861223 | 1.19E-63 | -1.69E-46 |
MS.gene050163 | MS.gene23137 | 0.854242 | 1.40E-61 | -1.69E-46 |
MS.gene050165 | MS.gene23137 | 0.83025 | 3.26E-55 | -1.69E-46 |
MS.gene050301 | MS.gene23137 | 0.820998 | 5.10E-53 | -1.69E-46 |
MS.gene050333 | MS.gene23137 | 0.851606 | 7.96E-61 | -1.69E-46 |
MS.gene050432 | MS.gene23137 | 0.861623 | 9.01E-64 | -1.69E-46 |
MS.gene05053 | MS.gene23137 | 0.803746 | 3.01E-49 | -1.69E-46 |
MS.gene050581 | MS.gene23137 | 0.816263 | 6.05E-52 | -1.69E-46 |
MS.gene050767 | MS.gene23137 | 0.999705 | 0.00E+00 | -1.69E-46 |
MS.gene050770 | MS.gene23137 | 0.998113 | 1.80E-256 | -1.69E-46 |
MS.gene050772 | MS.gene23137 | 0.834594 | 2.74E-56 | -1.69E-46 |
MS.gene050783 | MS.gene23137 | 0.827057 | 1.93E-54 | -1.69E-46 |
MS.gene05100 | MS.gene23137 | 0.844555 | 7.03E-59 | -1.69E-46 |
MS.gene05101 | MS.gene23137 | 0.881329 | 2.63E-70 | -1.69E-46 |
MS.gene05105 | MS.gene23137 | 0.814966 | 1.18E-51 | -1.69E-46 |
MS.gene051228 | MS.gene23137 | 0.881813 | 1.76E-70 | -1.69E-46 |
MS.gene051434 | MS.gene23137 | 0.805912 | 1.06E-49 | -1.69E-46 |
MS.gene051471 | MS.gene23137 | 0.849041 | 4.17E-60 | -1.69E-46 |
MS.gene051666 | MS.gene23137 | 0.808514 | 2.98E-50 | -1.69E-46 |
MS.gene051692 | MS.gene23137 | 0.808915 | 2.45E-50 | -1.69E-46 |
MS.gene051810 | MS.gene23137 | 0.836093 | 1.15E-56 | -1.69E-46 |
MS.gene051877 | MS.gene23137 | 0.830175 | 3.40E-55 | -1.69E-46 |
MS.gene052078 | MS.gene23137 | 0.844814 | 5.99E-59 | -1.69E-46 |
MS.gene052271 | MS.gene23137 | 0.897701 | 1.09E-76 | -1.69E-46 |
MS.gene052290 | MS.gene23137 | 0.885001 | 1.18E-71 | -1.69E-46 |
MS.gene052293 | MS.gene23137 | 0.816178 | 6.32E-52 | -1.69E-46 |
MS.gene052310 | MS.gene23137 | 0.85141 | 9.04E-61 | -1.69E-46 |
MS.gene052322 | MS.gene23137 | 0.807369 | 5.23E-50 | -1.69E-46 |
MS.gene052326 | MS.gene23137 | 0.877709 | 5.05E-69 | -1.69E-46 |
MS.gene052379 | MS.gene23137 | 0.862756 | 4.04E-64 | -1.69E-46 |
MS.gene052421 | MS.gene23137 | 0.820447 | 6.83E-53 | -1.69E-46 |
MS.gene052916 | MS.gene23137 | 0.812026 | 5.22E-51 | -1.69E-46 |
MS.gene053009 | MS.gene23137 | 0.864986 | 8.19E-65 | -1.69E-46 |
MS.gene053103 | MS.gene23137 | 0.825928 | 3.59E-54 | -1.69E-46 |
MS.gene053104 | MS.gene23137 | 0.833114 | 6.42E-56 | -1.69E-46 |
MS.gene053207 | MS.gene23137 | 0.806235 | 9.08E-50 | -1.69E-46 |
MS.gene053209 | MS.gene23137 | 0.811377 | 7.22E-51 | -1.69E-46 |
MS.gene053213 | MS.gene23137 | 0.839728 | 1.33E-57 | -1.69E-46 |
MS.gene053286 | MS.gene23137 | 0.829719 | 4.40E-55 | -1.69E-46 |
MS.gene053322 | MS.gene23137 | 0.905368 | 4.62E-80 | -1.69E-46 |
MS.gene053384 | MS.gene23137 | 0.825553 | 4.40E-54 | -1.69E-46 |
MS.gene053632 | MS.gene23137 | 0.812769 | 3.59E-51 | -1.69E-46 |
MS.gene053813 | MS.gene23137 | 0.832571 | 8.76E-56 | -1.69E-46 |
MS.gene053916 | MS.gene23137 | 0.800999 | 1.11E-48 | -1.69E-46 |
MS.gene054123 | MS.gene23137 | 0.819251 | 1.28E-52 | -1.69E-46 |
MS.gene054376 | MS.gene23137 | 0.974409 | 4.18E-138 | -1.69E-46 |
MS.gene05455 | MS.gene23137 | 0.812482 | 4.15E-51 | -1.69E-46 |
MS.gene054642 | MS.gene23137 | 0.85449 | 1.19E-61 | -1.69E-46 |
MS.gene054802 | MS.gene23137 | 0.910763 | 1.30E-82 | -1.69E-46 |
MS.gene054803 | MS.gene23137 | 0.913062 | 9.51E-84 | -1.69E-46 |
MS.gene054804 | MS.gene23137 | 0.915366 | 6.42E-85 | -1.69E-46 |
MS.gene05505 | MS.gene23137 | 0.837038 | 6.58E-57 | -1.69E-46 |
MS.gene055212 | MS.gene23137 | 0.810457 | 1.14E-50 | -1.69E-46 |
MS.gene055254 | MS.gene23137 | 0.903184 | 4.51E-79 | -1.69E-46 |
MS.gene055277 | MS.gene23137 | 0.86678 | 2.22E-65 | -1.69E-46 |
MS.gene055362 | MS.gene23137 | 0.812128 | 4.95E-51 | -1.69E-46 |
MS.gene055390 | MS.gene23137 | 0.831217 | 1.89E-55 | -1.69E-46 |
MS.gene055397 | MS.gene23137 | 0.921789 | 2.28E-88 | -1.69E-46 |
MS.gene055412 | MS.gene23137 | 0.83666 | 8.22E-57 | -1.69E-46 |
MS.gene055422 | MS.gene23137 | 0.817805 | 2.72E-52 | -1.69E-46 |
MS.gene055428 | MS.gene23137 | 0.805013 | 1.64E-49 | -1.69E-46 |
MS.gene055497 | MS.gene23137 | -0.821772 | 3.38E-53 | -1.69E-46 |
MS.gene055499 | MS.gene23137 | 0.918911 | 8.68E-87 | -1.69E-46 |
MS.gene055636 | MS.gene23137 | 0.844815 | 5.99E-59 | -1.69E-46 |
MS.gene055638 | MS.gene23137 | 0.83999 | 1.14E-57 | -1.69E-46 |
MS.gene055647 | MS.gene23137 | 0.871953 | 4.61E-67 | -1.69E-46 |
MS.gene055722 | MS.gene23137 | 0.838461 | 2.84E-57 | -1.69E-46 |
MS.gene055896 | MS.gene23137 | 0.835076 | 2.07E-56 | -1.69E-46 |
MS.gene05592 | MS.gene23137 | 0.877627 | 5.40E-69 | -1.69E-46 |
MS.gene055930 | MS.gene23137 | 0.813726 | 2.21E-51 | -1.69E-46 |
MS.gene056083 | MS.gene23137 | 0.82774 | 1.32E-54 | -1.69E-46 |
MS.gene056191 | MS.gene23137 | 0.80509 | 1.58E-49 | -1.69E-46 |
MS.gene056374 | MS.gene23137 | 0.845524 | 3.85E-59 | -1.69E-46 |
MS.gene056407 | MS.gene23137 | 0.800493 | 1.40E-48 | -1.69E-46 |
MS.gene056410 | MS.gene23137 | 0.836789 | 7.62E-57 | -1.69E-46 |
MS.gene056609 | MS.gene23137 | 0.845689 | 3.47E-59 | -1.69E-46 |
MS.gene056657 | MS.gene23137 | 0.830101 | 3.55E-55 | -1.69E-46 |
MS.gene056897 | MS.gene23137 | 0.824836 | 6.51E-54 | -1.69E-46 |
MS.gene057011 | MS.gene23137 | 0.856023 | 4.26E-62 | -1.69E-46 |
MS.gene057123 | MS.gene23137 | 0.82911 | 6.18E-55 | -1.69E-46 |
MS.gene057129 | MS.gene23137 | 0.922364 | 1.08E-88 | -1.69E-46 |
MS.gene057146 | MS.gene23137 | 0.830053 | 3.65E-55 | -1.69E-46 |
MS.gene057246 | MS.gene23137 | 0.813003 | 3.19E-51 | -1.69E-46 |
MS.gene057295 | MS.gene23137 | 0.863044 | 3.30E-64 | -1.69E-46 |
MS.gene057331 | MS.gene23137 | 0.834761 | 2.49E-56 | -1.69E-46 |
MS.gene05735 | MS.gene23137 | 0.806035 | 1.00E-49 | -1.69E-46 |
MS.gene057416 | MS.gene23137 | 0.860301 | 2.27E-63 | -1.69E-46 |
MS.gene057926 | MS.gene23137 | 0.800853 | 1.19E-48 | -1.69E-46 |
MS.gene058019 | MS.gene23137 | 0.84475 | 6.23E-59 | -1.69E-46 |
MS.gene058082 | MS.gene23137 | 0.804726 | 1.88E-49 | -1.69E-46 |
MS.gene058293 | MS.gene23137 | 0.887056 | 2.00E-72 | -1.69E-46 |
MS.gene058323 | MS.gene23137 | 0.858035 | 1.09E-62 | -1.69E-46 |
MS.gene058419 | MS.gene23137 | 0.820394 | 7.02E-53 | -1.69E-46 |
MS.gene058660 | MS.gene23137 | 0.875234 | 3.62E-68 | -1.69E-46 |
MS.gene058723 | MS.gene23137 | 0.817633 | 2.98E-52 | -1.69E-46 |
MS.gene058773 | MS.gene23137 | 0.80124 | 9.89E-49 | -1.69E-46 |
MS.gene058787 | MS.gene23137 | 0.813768 | 2.17E-51 | -1.69E-46 |
MS.gene058903 | MS.gene23137 | 0.829125 | 6.13E-55 | -1.69E-46 |
MS.gene058993 | MS.gene23137 | 0.801083 | 1.06E-48 | -1.69E-46 |
MS.gene059029 | MS.gene23137 | 0.839376 | 1.64E-57 | -1.69E-46 |
MS.gene059326 | MS.gene23137 | 0.854885 | 9.13E-62 | -1.69E-46 |
MS.gene059536 | MS.gene23137 | 0.865795 | 4.56E-65 | -1.69E-46 |
MS.gene059597 | MS.gene23137 | 0.806399 | 8.38E-50 | -1.69E-46 |
MS.gene05959 | MS.gene23137 | 0.807739 | 4.36E-50 | -1.69E-46 |
MS.gene059676 | MS.gene23137 | 0.837348 | 5.48E-57 | -1.69E-46 |
MS.gene059677 | MS.gene23137 | 0.817852 | 2.66E-52 | -1.69E-46 |
MS.gene059688 | MS.gene23137 | 0.832623 | 8.51E-56 | -1.69E-46 |
MS.gene059692 | MS.gene23137 | 0.843912 | 1.05E-58 | -1.69E-46 |
MS.gene059695 | MS.gene23137 | 0.847647 | 1.01E-59 | -1.69E-46 |
MS.gene059708 | MS.gene23137 | 0.801866 | 7.36E-49 | -1.69E-46 |
MS.gene059711 | MS.gene23137 | 0.822916 | 1.83E-53 | -1.69E-46 |
MS.gene059718 | MS.gene23137 | 0.810919 | 9.07E-51 | -1.69E-46 |
MS.gene059858 | MS.gene23137 | 0.846525 | 2.06E-59 | -1.69E-46 |
MS.gene059960 | MS.gene23137 | 0.919087 | 6.97E-87 | -1.69E-46 |
MS.gene059974 | MS.gene23137 | 0.825404 | 4.77E-54 | -1.69E-46 |
MS.gene060005 | MS.gene23137 | 0.832894 | 7.29E-56 | -1.69E-46 |
MS.gene060193 | MS.gene23137 | 0.824148 | 9.44E-54 | -1.69E-46 |
MS.gene060356 | MS.gene23137 | 0.827693 | 1.36E-54 | -1.69E-46 |
MS.gene06037 | MS.gene23137 | 0.823486 | 1.35E-53 | -1.69E-46 |
MS.gene060804 | MS.gene23137 | 0.854676 | 1.05E-61 | -1.69E-46 |
MS.gene060818 | MS.gene23137 | 0.843241 | 1.58E-58 | -1.69E-46 |
MS.gene061041 | MS.gene23137 | 0.834347 | 3.16E-56 | -1.69E-46 |
MS.gene061051 | MS.gene23137 | -0.810221 | 1.28E-50 | -1.69E-46 |
MS.gene061134 | MS.gene23137 | 0.804076 | 2.57E-49 | -1.69E-46 |
MS.gene061150 | MS.gene23137 | 0.836872 | 7.25E-57 | -1.69E-46 |
MS.gene061171 | MS.gene23137 | 0.8067 | 7.24E-50 | -1.69E-46 |
MS.gene061200 | MS.gene23137 | 0.931033 | 6.86E-94 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23137.t1 | MTR_7g111880 | 96.000 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 3.30e-172 | 474 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23137.t1 | AT4G15510 | 64.659 | 249 | 76 | 5 | 10 | 247 | 40 | 287 | 4.09e-105 | 306 |
MS.gene23137.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23137.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23137.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23137.t1 | AT4G15510 | 69.595 | 148 | 40 | 3 | 35 | 178 | 72 | 218 | 1.67e-62 | 196 |
Find 0 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCTTGATGAAAATATAT+CGG | + | 51770:10447-10466 | MS.gene23137:CDS | 15.0% |
!!! | ATATTTTCATCAAGAATATA+AGG | - | 51770:10445-10464 | None:intergenic | 15.0% |
!! | AAATAAAATAATTGTGACAG+AGG | - | 51770:10173-10192 | None:intergenic | 20.0% |
!! | TACATTTATCAGAAAAATTG+TGG | + | 51770:10674-10693 | MS.gene23137:intron | 20.0% |
! | GAATATGTTGATACATTTGA+TGG | + | 51770:10349-10368 | MS.gene23137:CDS | 25.0% |
AAAACTTACGGTAATTTGAG+GGG | + | 51770:10722-10741 | MS.gene23137:intron | 30.0% | |
AGAAAATGTGTTTCAAGAAG+AGG | + | 51770:10991-11010 | MS.gene23137:CDS | 30.0% | |
CAAAACTTACGGTAATTTGA+GGG | + | 51770:10721-10740 | MS.gene23137:intron | 30.0% | |
CATTCAACTATCCATCAAAT+TGG | + | 51770:10377-10396 | MS.gene23137:CDS | 30.0% | |
CTTACTTGAATCCAATTTGA+TGG | - | 51770:10391-10410 | None:intergenic | 30.0% | |
TCAAATTGGATTCAAGTAAG+AGG | + | 51770:10391-10410 | MS.gene23137:CDS | 30.0% | |
! | CAAATTGTACTATCAAGTTG+AGG | + | 51770:10645-10664 | MS.gene23137:CDS | 30.0% |
! | TCTTCTTGAAACACATTTTC+TGG | - | 51770:10992-11011 | None:intergenic | 30.0% |
!! | AATGACATTGCTTTTCTTCT+AGG | - | 51770:10262-10281 | None:intergenic | 30.0% |
ATGGATGGAATTTACCGAAT+TGG | - | 51770:10136-10155 | None:intergenic | 35.0% | |
ATTCAAGACTGTTCAAGACT+TGG | + | 51770:10498-10517 | MS.gene23137:CDS | 35.0% | |
CTCTGTTCTTGCAAAACTTA+CGG | + | 51770:10710-10729 | MS.gene23137:intron | 35.0% | |
GCAAAACTTACGGTAATTTG+AGG | + | 51770:10720-10739 | MS.gene23137:intron | 35.0% | |
GTAATCTCAACTCATACAGT+TGG | - | 51770:10964-10983 | None:intergenic | 35.0% | |
GTCTTGAATTTCGAAGAAGA+AGG | - | 51770:10487-10506 | None:intergenic | 35.0% | |
TGGATGGAATTTACCGAATT+GGG | - | 51770:10135-10154 | None:intergenic | 35.0% | |
TTACTGAGTTTATGTCCACT+AGG | + | 51770:10563-10582 | MS.gene23137:CDS | 35.0% | |
TTCAAGACTGTTCAAGACTT+GGG | + | 51770:10499-10518 | MS.gene23137:CDS | 35.0% | |
! | GGGTGTCTTTTATATGGTAA+TGG | + | 51770:10742-10761 | MS.gene23137:intron | 35.0% |
!!! | TGGTGCTGATATTTTCTTCA+GGG | + | 51770:10417-10436 | MS.gene23137:CDS | 35.0% |
!!! | TTTGAGGGGTGTCTTTTATA+TGG | + | 51770:10736-10755 | MS.gene23137:intron | 35.0% |
ACATATTCACGAAACACACG+AGG | - | 51770:10337-10356 | None:intergenic | 40.0% | |
ACCCGTTGTTGTGATTGTAT+TGG | - | 51770:10049-10068 | None:intergenic | 40.0% | |
ACTTACATTCTCTCCGACAT+TGG | + | 51770:10292-10311 | MS.gene23137:CDS | 40.0% | |
AGAGGAGAAAGCTCATGAAA+TGG | - | 51770:10155-10174 | None:intergenic | 40.0% | |
ATGGAAGTGAAATGGTGACA+TGG | - | 51770:10085-10104 | None:intergenic | 40.0% | |
GAATTTACCGAATTGGGTGT+GGG | - | 51770:10129-10148 | None:intergenic | 40.0% | |
GAGAAAGCTCATGAAATGGA+TGG | - | 51770:10151-10170 | None:intergenic | 40.0% | |
GCCAATACAATCACAACAAC+GGG | + | 51770:10045-10064 | MS.gene23137:CDS | 40.0% | |
GGCCAATACAATCACAACAA+CGG | + | 51770:10044-10063 | MS.gene23137:CDS | 40.0% | |
TAGCGCTAGACTACAATGTA+TGG | - | 51770:10770-10789 | None:intergenic | 40.0% | |
TGCTAATGCTGTACCAATGT+CGG | - | 51770:10308-10327 | None:intergenic | 40.0% | |
TGCTGTTATGCCACAAGATA+GGG | + | 51770:10883-10902 | MS.gene23137:CDS | 40.0% | |
TGGAAGTGAAATGGTGACAT+GGG | - | 51770:10084-10103 | None:intergenic | 40.0% | |
TTTCAACTCCTAGAACAGAC+AGG | - | 51770:10937-10956 | None:intergenic | 40.0% | |
! | TTGCTGTTATGCCACAAGAT+AGG | + | 51770:10882-10901 | MS.gene23137:CDS | 40.0% |
!! | TGTGTGTTGTTTGTGTTGCT+AGG | + | 51770:10826-10845 | MS.gene23137:intron | 40.0% |
!!! | CTGGTGCTGATATTTTCTTC+AGG | + | 51770:10416-10435 | MS.gene23137:CDS | 40.0% |
ACGTTTAACACCAAGCCTAG+TGG | - | 51770:10581-10600 | None:intergenic | 45.0% | |
AGTGAAATGGTGACATGGGT+CGG | - | 51770:10080-10099 | None:intergenic | 45.0% | |
ATCATCAGCAACTCTCTCAG+AGG | - | 51770:10623-10642 | None:intergenic | 45.0% | |
CATTTCTCCCACACCCAATT+CGG | + | 51770:10119-10138 | MS.gene23137:CDS | 45.0% | |
GAGTGAACTTCGTCAAGTCA+TGG | + | 51770:11015-11034 | MS.gene23137:CDS | 45.0% | |
GAGTTTATGTCCACTAGGCT+TGG | + | 51770:10568-10587 | MS.gene23137:CDS | 45.0% | |
GGAATTTACCGAATTGGGTG+TGG | - | 51770:10130-10149 | None:intergenic | 45.0% | |
GGCTTCGTTTCGAGCAAATA+AGG | + | 51770:11036-11055 | MS.gene23137:CDS | 45.0% | |
TCTGAGAGAGTTGCTGATGA+TGG | + | 51770:10622-10641 | MS.gene23137:CDS | 45.0% | |
TGTTATGCCACAAGATAGGG+TGG | + | 51770:10886-10905 | MS.gene23137:CDS | 45.0% | |
! | TGGATTCAAGTAAGAGGTGC+TGG | + | 51770:10397-10416 | MS.gene23137:CDS | 45.0% |
!! | ACTTTCTTCCCAGCTTGTTG+AGG | - | 51770:10529-10548 | None:intergenic | 45.0% |
AAACGCACCACCCTATCTTG+TGG | - | 51770:10896-10915 | None:intergenic | 50.0% | |
ACAAGATAGGGTGGTGCGTT+TGG | + | 51770:10895-10914 | MS.gene23137:CDS | 50.0% | |
ATAGGGTGGTGCGTTTGGAA+TGG | + | 51770:10900-10919 | MS.gene23137:CDS | 50.0% | |
ATCAGCAACTCTCTCAGAGG+TGG | - | 51770:10620-10639 | None:intergenic | 50.0% | |
CGAATTGGGTGTGGGAGAAA+TGG | - | 51770:10121-10140 | None:intergenic | 50.0% | |
CGAGGGGAATGGAAGTGAAA+TGG | - | 51770:10093-10112 | None:intergenic | 50.0% | |
GTGAAATGGTGACATGGGTC+GGG | - | 51770:10079-10098 | None:intergenic | 50.0% | |
! | TAGGGTGGTGCGTTTGGAAT+GGG | + | 51770:10901-10920 | MS.gene23137:CDS | 50.0% |
! | TGCGTTTGGAATGGGATAGG+AGG | + | 51770:10909-10928 | MS.gene23137:CDS | 50.0% |
! | TGGTGCGTTTGGAATGGGAT+AGG | + | 51770:10906-10925 | MS.gene23137:CDS | 50.0% |
!! | AGGAGGTACCTGTCTGTTCT+AGG | + | 51770:10926-10945 | MS.gene23137:CDS | 50.0% |
AAATGGAGCAGCGAGGGGAA+TGG | - | 51770:10104-10123 | None:intergenic | 55.0% | |
TGGGAGAAATGGAGCAGCGA+GGG | - | 51770:10110-10129 | None:intergenic | 55.0% | |
TGGGTTCGCCTCAACAAGCT+GGG | + | 51770:10518-10537 | MS.gene23137:CDS | 55.0% | |
TTGGGTTCGCCTCAACAAGC+TGG | + | 51770:10517-10536 | MS.gene23137:CDS | 55.0% | |
GGGAGAAATGGAGCAGCGAG+GGG | - | 51770:10109-10128 | None:intergenic | 60.0% | |
GTGGGAGAAATGGAGCAGCG+AGG | - | 51770:10111-10130 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51770 | gene | 10042 | 11069 | 10042 | ID=MS.gene23137 |
51770 | mRNA | 10042 | 11069 | 10042 | ID=MS.gene23137.t1;Parent=MS.gene23137 |
51770 | exon | 10042 | 10140 | 10042 | ID=MS.gene23137.t1.exon1;Parent=MS.gene23137.t1 |
51770 | CDS | 10042 | 10140 | 10042 | ID=cds.MS.gene23137.t1;Parent=MS.gene23137.t1 |
51770 | exon | 10238 | 10666 | 10238 | ID=MS.gene23137.t1.exon2;Parent=MS.gene23137.t1 |
51770 | CDS | 10238 | 10666 | 10238 | ID=cds.MS.gene23137.t1;Parent=MS.gene23137.t1 |
51770 | exon | 10848 | 11069 | 10848 | ID=MS.gene23137.t1.exon3;Parent=MS.gene23137.t1 |
51770 | CDS | 10848 | 11069 | 10848 | ID=cds.MS.gene23137.t1;Parent=MS.gene23137.t1 |
Gene Sequence |
Protein sequence |