Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33855.t1 | XP_003592305.1 | 91.4 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 1.30E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33855.t1 | Q9FJ82 | 78.2 | 257 | 55 | 1 | 15 | 270 | 32 | 288 | 2.1e-106 | 386.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33855.t1 | G7IAQ3 | 91.4 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 9.5e-137 | 495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene33855 | 0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene049284 | MS.gene33855 | 0.829889 | 4.00E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene33855 | 0.850234 | 1.94E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene33855 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene049389 | MS.gene33855 | 0.831682 | 1.45E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene33855 | 0.878573 | 2.52E-69 | -1.69E-46 |
| MS.gene049491 | MS.gene33855 | 0.870362 | 1.55E-66 | -1.69E-46 |
| MS.gene049614 | MS.gene33855 | 0.846616 | 1.94E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene33855 | 0.863733 | 2.02E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene33855 | 0.857827 | 1.25E-62 | -1.69E-46 |
| MS.gene049758 | MS.gene33855 | 0.858469 | 8.07E-63 | -1.69E-46 |
| MS.gene049760 | MS.gene33855 | 0.828044 | 1.12E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene33855 | 0.857223 | 1.89E-62 | -1.69E-46 |
| MS.gene050076 | MS.gene33855 | 0.880244 | 6.44E-70 | -1.69E-46 |
| MS.gene050099 | MS.gene33855 | 0.826158 | 3.16E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene33855 | 0.82328 | 1.51E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene33855 | 0.901239 | 3.28E-78 | -1.69E-46 |
| MS.gene050397 | MS.gene33855 | 0.852405 | 4.72E-61 | -1.69E-46 |
| MS.gene050404 | MS.gene33855 | 0.825773 | 3.90E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene33855 | 0.830525 | 2.80E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene33855 | 0.876807 | 1.04E-68 | -1.69E-46 |
| MS.gene050464 | MS.gene33855 | 0.847274 | 1.28E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene33855 | 0.864744 | 9.76E-65 | -1.69E-46 |
| MS.gene05053 | MS.gene33855 | 0.801617 | 8.27E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene33855 | 0.810919 | 9.07E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene33855 | 0.849103 | 4.01E-60 | -1.69E-46 |
| MS.gene050767 | MS.gene33855 | 0.874842 | 4.92E-68 | -1.69E-46 |
| MS.gene050770 | MS.gene33855 | 0.877965 | 4.11E-69 | -1.69E-46 |
| MS.gene050783 | MS.gene33855 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene33855 | 0.841145 | 5.67E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene33855 | 0.906427 | 1.50E-80 | -1.69E-46 |
| MS.gene05105 | MS.gene33855 | 0.845293 | 4.44E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene33855 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene33855 | 0.824378 | 8.34E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene33855 | 0.898529 | 4.85E-77 | -1.69E-46 |
| MS.gene051582 | MS.gene33855 | 0.851457 | 8.76E-61 | -1.69E-46 |
| MS.gene051663 | MS.gene33855 | 0.80449 | 2.11E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene33855 | 0.846756 | 1.78E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene33855 | 0.819806 | 9.57E-53 | -1.69E-46 |
| MS.gene051877 | MS.gene33855 | 0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene33855 | 0.907987 | 2.80E-81 | -1.69E-46 |
| MS.gene052178 | MS.gene33855 | 0.853892 | 1.77E-61 | -1.69E-46 |
| MS.gene052188 | MS.gene33855 | 0.876933 | 9.42E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene33855 | 0.845894 | 3.05E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene33855 | 0.816346 | 5.80E-52 | -1.69E-46 |
| MS.gene052290 | MS.gene33855 | 0.86614 | 3.54E-65 | -1.69E-46 |
| MS.gene052293 | MS.gene33855 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene33855 | 0.913813 | 3.98E-84 | -1.69E-46 |
| MS.gene052322 | MS.gene33855 | 0.872742 | 2.52E-67 | -1.69E-46 |
| MS.gene052326 | MS.gene33855 | 0.888705 | 4.66E-73 | -1.69E-46 |
| MS.gene052340 | MS.gene33855 | 0.88079 | 4.11E-70 | -1.69E-46 |
| MS.gene052379 | MS.gene33855 | 0.831863 | 1.31E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene33855 | 0.852235 | 5.27E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene33855 | 0.837151 | 6.16E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene33855 | 0.842058 | 3.26E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene33855 | 0.843931 | 1.03E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene33855 | 0.830458 | 2.90E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene33855 | 0.868838 | 4.85E-66 | -1.69E-46 |
| MS.gene053104 | MS.gene33855 | 0.830136 | 3.48E-55 | -1.69E-46 |
| MS.gene053107 | MS.gene33855 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene33855 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene053181 | MS.gene33855 | 0.804018 | 2.64E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene33855 | 0.872922 | 2.19E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene33855 | 0.885644 | 6.80E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene33855 | 0.801331 | 9.47E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene33855 | 0.858896 | 6.01E-63 | -1.69E-46 |
| MS.gene053813 | MS.gene33855 | 0.812802 | 3.53E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene33855 | 0.86158 | 9.29E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene33855 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene33855 | 0.886467 | 3.33E-72 | -1.69E-46 |
| MS.gene054376 | MS.gene33855 | 0.885319 | 9.00E-72 | -1.69E-46 |
| MS.gene05455 | MS.gene33855 | 0.848103 | 7.59E-60 | -1.69E-46 |
| MS.gene054802 | MS.gene33855 | 0.866523 | 2.68E-65 | -1.69E-46 |
| MS.gene054803 | MS.gene33855 | 0.867954 | 9.35E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene33855 | 0.871149 | 8.51E-67 | -1.69E-46 |
| MS.gene054955 | MS.gene33855 | 0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene33855 | 0.829244 | 5.74E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene33855 | 0.861949 | 7.16E-64 | -1.69E-46 |
| MS.gene055254 | MS.gene33855 | 0.845441 | 4.05E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene33855 | 0.902931 | 5.85E-79 | -1.69E-46 |
| MS.gene055390 | MS.gene33855 | 0.862664 | 4.32E-64 | -1.69E-46 |
| MS.gene055397 | MS.gene33855 | 0.86704 | 1.83E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene33855 | 0.871605 | 6.02E-67 | -1.69E-46 |
| MS.gene055422 | MS.gene33855 | 0.898953 | 3.20E-77 | -1.69E-46 |
| MS.gene055428 | MS.gene33855 | 0.887185 | 1.78E-72 | -1.69E-46 |
| MS.gene055499 | MS.gene33855 | 0.845234 | 4.61E-59 | -1.69E-46 |
| MS.gene055533 | MS.gene33855 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene05553 | MS.gene33855 | 0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene33855 | 0.822158 | 2.75E-53 | -1.69E-46 |
| MS.gene055712 | MS.gene33855 | 0.808492 | 3.02E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene33855 | 0.855791 | 4.98E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene33855 | 0.838191 | 3.33E-57 | -1.69E-46 |
| MS.gene055930 | MS.gene33855 | 0.804083 | 2.56E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene33855 | 0.84431 | 8.18E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene33855 | 0.855291 | 6.96E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene33855 | 0.836323 | 1.00E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene33855 | 0.812515 | 4.08E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene33855 | 0.883656 | 3.73E-71 | -1.69E-46 |
| MS.gene056612 | MS.gene33855 | 0.861906 | 7.38E-64 | -1.69E-46 |
| MS.gene056659 | MS.gene33855 | 0.809591 | 1.75E-50 | -1.69E-46 |
| MS.gene056719 | MS.gene33855 | 0.825285 | 5.09E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene33855 | 0.843664 | 1.22E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene33855 | 0.841255 | 5.31E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene33855 | 0.866366 | 3.01E-65 | -1.69E-46 |
| MS.gene05702 | MS.gene33855 | 0.874818 | 5.02E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene33855 | 0.815315 | 9.85E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene33855 | 0.868862 | 4.76E-66 | -1.69E-46 |
| MS.gene057124 | MS.gene33855 | 0.844188 | 8.83E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene33855 | 0.871013 | 9.44E-67 | -1.69E-46 |
| MS.gene057146 | MS.gene33855 | 0.845342 | 4.31E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene33855 | 0.819438 | 1.16E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene33855 | 0.880544 | 5.03E-70 | -1.69E-46 |
| MS.gene05733 | MS.gene33855 | 0.865718 | 4.82E-65 | -1.69E-46 |
| MS.gene05735 | MS.gene33855 | 0.817472 | 3.24E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene33855 | 0.830908 | 2.25E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene33855 | 0.823943 | 1.05E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene33855 | 0.821568 | 3.77E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene33855 | 0.823519 | 1.33E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene33855 | 0.833511 | 5.11E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene33855 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene33855 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene33855 | 0.878201 | 3.40E-69 | -1.69E-46 |
| MS.gene058019 | MS.gene33855 | 0.829165 | 6.00E-55 | -1.69E-46 |
| MS.gene058082 | MS.gene33855 | 0.84447 | 7.41E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene33855 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene33855 | 0.815035 | 1.14E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene33855 | 0.874407 | 6.92E-68 | -1.69E-46 |
| MS.gene058276 | MS.gene33855 | 0.842795 | 2.08E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene33855 | 0.894375 | 2.62E-75 | -1.69E-46 |
| MS.gene058365 | MS.gene33855 | 0.861418 | 1.04E-63 | -1.69E-46 |
| MS.gene058660 | MS.gene33855 | 0.911619 | 4.95E-83 | -1.69E-46 |
| MS.gene058787 | MS.gene33855 | 0.829659 | 4.55E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene33855 | 0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene33855 | 0.821237 | 4.49E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene33855 | 0.869403 | 3.18E-66 | -1.69E-46 |
| MS.gene058993 | MS.gene33855 | 0.836311 | 1.01E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene33855 | 0.87104 | 9.25E-67 | -1.69E-46 |
| MS.gene059141 | MS.gene33855 | 0.813926 | 2.00E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene33855 | 0.869117 | 3.94E-66 | -1.69E-46 |
| MS.gene059518 | MS.gene33855 | 0.851881 | 6.65E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene33855 | 0.863607 | 2.21E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene33855 | 0.91474 | 1.34E-84 | -1.69E-46 |
| MS.gene05959 | MS.gene33855 | 0.856941 | 2.29E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene33855 | 0.901437 | 2.68E-78 | -1.69E-46 |
| MS.gene059688 | MS.gene33855 | 0.901735 | 1.98E-78 | -1.69E-46 |
| MS.gene059692 | MS.gene33855 | 0.911791 | 4.08E-83 | -1.69E-46 |
| MS.gene059695 | MS.gene33855 | 0.913125 | 8.84E-84 | -1.69E-46 |
| MS.gene059708 | MS.gene33855 | 0.837979 | 3.78E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene33855 | 0.814395 | 1.58E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene33855 | 0.850152 | 2.04E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene33855 | 0.903669 | 2.73E-79 | -1.69E-46 |
| MS.gene059899 | MS.gene33855 | 0.804773 | 1.84E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene33855 | 0.882349 | 1.12E-70 | -1.69E-46 |
| MS.gene059974 | MS.gene33855 | 0.827644 | 1.40E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene33855 | 0.828002 | 1.15E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene33855 | 0.851312 | 9.63E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene33855 | 0.843677 | 1.21E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene33855 | 0.852695 | 3.90E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene33855 | 0.853028 | 3.13E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene33855 | 0.857019 | 2.17E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene33855 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene33855 | 0.810961 | 8.88E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene33855 | 0.836465 | 9.21E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene33855 | 0.901413 | 2.75E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene33855 | -0.86679 | 2.20E-65 | -1.69E-46 |
| MS.gene061159 | MS.gene33855 | 0.805014 | 1.64E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene33855 | 0.863653 | 2.14E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33855.t1 | MTR_1g101400 | 91.438 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 0.0 | 533 |
| MS.gene33855.t1 | MTR_2g021790 | 54.412 | 68 | 26 | 2 | 21 | 86 | 1 | 65 | 1.39e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33855.t1 | AT5G52100 | 71.528 | 288 | 64 | 2 | 1 | 270 | 1 | 288 | 3.70e-146 | 411 |
Find 66 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAACAGGTTGTAATAAA+TGG | 0.207909 | 1.1:+73020574 | MS.gene33855:intron |
| AAATGACCTTACCATGGTTT+TGG | 0.224480 | 1.1:+73020979 | MS.gene33855:CDS |
| AAAGGCAAGGGGTCAAGTTT+TGG | 0.246017 | 1.1:+73022340 | MS.gene33855:intron |
| TAGAGAGATTGTTGGCAATT+TGG | 0.249550 | 1.1:-73022171 | None:intergenic |
| TTGAGAATTCAAGTAGTTGA+TGG | 0.320100 | 1.1:-73020393 | None:intergenic |
| CAATTTCGACATTGCGGTAA+TGG | 0.331384 | 1.1:-73021881 | None:intergenic |
| AATGGAGCAGCAAAGGAAAT+AGG | 0.336907 | 1.1:+73020592 | MS.gene33855:CDS |
| CAACATGTTGGGGAAGATAT+TGG | 0.357960 | 1.1:+73020679 | MS.gene33855:CDS |
| GACTACAACCGCTGTGGCCT+TGG | 0.364137 | 1.1:-73021121 | None:intergenic |
| ACTGTATAGGCAACAGCATT+TGG | 0.373770 | 1.1:+73021514 | MS.gene33855:intron |
| GTTGGCAATTTGGTTTGCTT+CGG | 0.404040 | 1.1:-73022161 | None:intergenic |
| TGGAATTCGCGTGCACAGTT+TGG | 0.408268 | 1.1:+73022367 | MS.gene33855:CDS |
| CTATTGATACTCAACATGTT+GGG | 0.408524 | 1.1:+73020668 | MS.gene33855:CDS |
| CTGCAACAATATTGATCCTA+TGG | 0.409023 | 1.1:-73021835 | None:intergenic |
| AGTAGTTGATGGAATGAAAC+TGG | 0.409025 | 1.1:-73020382 | None:intergenic |
| ATCTGTGATATCATGCTTGA+TGG | 0.417837 | 1.1:-73022704 | None:intergenic |
| GCCAGAGGAATGGAAGTTGC+TGG | 0.433583 | 1.1:+73020643 | MS.gene33855:CDS |
| TCACCCCTTGCTCACCATGC+TGG | 0.433731 | 1.1:-73021611 | None:intergenic |
| GGTATATGACAATGTAAAAC+AGG | 0.437708 | 1.1:+73021164 | MS.gene33855:CDS |
| TCCAGCAACTTCCATTCCTC+TGG | 0.450267 | 1.1:-73020644 | None:intergenic |
| TCTTACATTTGCATTAGCCT+TGG | 0.452314 | 1.1:-73021910 | None:intergenic |
| CAACTACTTGAATTCTCAAA+TGG | 0.460268 | 1.1:+73020397 | MS.gene33855:CDS |
| ATTTGGTTTGCTTCGGCCGA+TGG | 0.481953 | 1.1:-73022154 | None:intergenic |
| ACCGAGGTTAGAGAGATTGT+TGG | 0.485133 | 1.1:-73022179 | None:intergenic |
| GGAATGAAACTGGCAACTTA+AGG | 0.494198 | 1.1:-73020372 | None:intergenic |
| GCTATTGATACTCAACATGT+TGG | 0.498878 | 1.1:+73020667 | MS.gene33855:CDS |
| ACCGTATCTAATTTGATTCG+CGG | 0.502405 | 1.1:-73021559 | None:intergenic |
| AGACTCCTCAACAGATGTCT+TGG | 0.508028 | 1.1:+73022219 | MS.gene33855:CDS |
| GTTGCTCCAACGCTTTCCAT+AGG | 0.508224 | 1.1:+73021819 | MS.gene33855:CDS |
| ACTATAATGACAGGGTGTCT+TGG | 0.515706 | 1.1:+73021797 | MS.gene33855:intron |
| TTTCCTATAGCTTTGTGGCA+TGG | 0.525843 | 1.1:+73020931 | MS.gene33855:intron |
| AGGATCAATATTGTTGCAGC+AGG | 0.526093 | 1.1:+73021839 | MS.gene33855:CDS |
| TGTAATAAATGGAGCAGCAA+AGG | 0.530888 | 1.1:+73020585 | MS.gene33855:CDS |
| GCCAACAATCTCTCTAACCT+CGG | 0.544225 | 1.1:+73022178 | MS.gene33855:CDS |
| CTAATGGCTATCAACAAGCC+TGG | 0.546599 | 1.1:-73022742 | None:intergenic |
| ACATTGTCATATACCGCGGA+AGG | 0.549371 | 1.1:-73021156 | None:intergenic |
| AGCAGTATTAGCTGTGACAA+AGG | 0.549949 | 1.1:+73020621 | MS.gene33855:CDS |
| TGTTGGGGAAGATATTGGAC+AGG | 0.558324 | 1.1:+73020684 | MS.gene33855:CDS |
| ATGGTAAGGTCATTTAGTAT+AGG | 0.563180 | 1.1:-73020971 | None:intergenic |
| TTACCGCAATGTCGAAATTG+TGG | 0.563978 | 1.1:+73021884 | MS.gene33855:CDS |
| TGTTATACAGGATCTTCCAT+CGG | 0.565260 | 1.1:+73022138 | MS.gene33855:intron |
| TGTCGAAATTGTGGAATCCA+AGG | 0.571619 | 1.1:+73021893 | MS.gene33855:CDS |
| ATTGATCCTATGGAAAGCGT+TGG | 0.571844 | 1.1:-73021825 | None:intergenic |
| GATGTACAATGTCTTATGCC+AGG | 0.572407 | 1.1:+73022724 | MS.gene33855:CDS |
| TAGAGCCCAAAACCATGGTA+AGG | 0.573337 | 1.1:-73020985 | None:intergenic |
| AAGTGAACTGTTGTACTAGA+GGG | 0.580769 | 1.1:-73022404 | None:intergenic |
| AAAGTGAACTGTTGTACTAG+AGG | 0.590884 | 1.1:-73022405 | None:intergenic |
| TGTGACAAAGGCCAGAGGAA+TGG | 0.593244 | 1.1:+73020633 | MS.gene33855:CDS |
| GTTGTACTAGAGGGAAGCCC+TGG | 0.594961 | 1.1:-73022395 | None:intergenic |
| GCCGCGAATCAAATTAGATA+CGG | 0.602862 | 1.1:+73021558 | MS.gene33855:CDS |
| TATTGATACTCAACATGTTG+GGG | 0.603145 | 1.1:+73020669 | MS.gene33855:CDS |
| TTTAGTATAGGTATTTCAAG+AGG | 0.603621 | 1.1:-73020959 | None:intergenic |
| CGATTTCACTGACCCTTCCG+CGG | 0.603993 | 1.1:+73021143 | MS.gene33855:CDS |
| ATTATCAGCATTCTGTGAGA+AGG | 0.611346 | 1.1:+73021588 | MS.gene33855:CDS |
| TAGAAAAGTAGTGCGCCTCA+AGG | 0.613059 | 1.1:+73022762 | MS.gene33855:CDS |
| TATACTAAATGACCTTACCA+TGG | 0.623911 | 1.1:+73020973 | MS.gene33855:CDS |
| CATTGTCATATACCGCGGAA+GGG | 0.627711 | 1.1:-73021155 | None:intergenic |
| ATTCTGTGAGAAGGCCAGCA+TGG | 0.629094 | 1.1:+73021597 | MS.gene33855:CDS |
| CCTTACCAAGACATCTGTTG+AGG | 0.630824 | 1.1:-73022224 | None:intergenic |
| ATTCCACAATTTCGACATTG+CGG | 0.643338 | 1.1:-73021887 | None:intergenic |
| CTCTGTTATAGATTTGACCG+AGG | 0.649127 | 1.1:-73022195 | None:intergenic |
| AGATATAGAGCCCAAAACCA+TGG | 0.651854 | 1.1:-73020990 | None:intergenic |
| TATCACACGACAAAGGCAAG+GGG | 0.699381 | 1.1:+73022329 | MS.gene33855:intron |
| TTTGCAGTCCAAGGCCACAG+CGG | 0.733235 | 1.1:+73021113 | MS.gene33855:intron |
| TTAGCTGTGACAAAGGCCAG+AGG | 0.735270 | 1.1:+73020628 | MS.gene33855:CDS |
| GAAATCGACTACAACCGCTG+TGG | 0.746133 | 1.1:-73021127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTTAGTCAATTTA+AGG | + | chr1.1:73022630-73022649 | MS.gene33855:intron | 10.0% |
| !! | CTATAGGAAAATAAAAAATT+AGG | - | chr1.1:73020921-73020940 | None:intergenic | 15.0% |
| !! | TTATATAAGCACTTAATTAA+CGG | + | chr1.1:73020893-73020912 | MS.gene33855:intron | 15.0% |
| !! | AAGACTGATAGTTTATTTAT+TGG | + | chr1.1:73021272-73021291 | MS.gene33855:intron | 20.0% |
| !! | AAGATGAAGTGTAAATTAAA+TGG | + | chr1.1:73021240-73021259 | MS.gene33855:intron | 20.0% |
| !! | AGACTGATAGTTTATTTATT+GGG | + | chr1.1:73021273-73021292 | MS.gene33855:intron | 20.0% |
| !! | TATATAAGCACTTAATTAAC+GGG | + | chr1.1:73020894-73020913 | MS.gene33855:intron | 20.0% |
| !! | TTATGGTAAAATCTATTTAG+AGG | + | chr1.1:73021975-73021994 | MS.gene33855:intron | 20.0% |
| !! | TTGTAGATACAAAAAGATTA+AGG | - | chr1.1:73021075-73021094 | None:intergenic | 20.0% |
| !!! | CAAAGTGTTAATTTTGAAAA+TGG | - | chr1.1:73020503-73020522 | None:intergenic | 20.0% |
| !!! | TAAATAGATTTTACCATAAG+TGG | - | chr1.1:73021974-73021993 | None:intergenic | 20.0% |
| !!! | TGTTATAAGTTGTTTTCATA+AGG | - | chr1.1:73020794-73020813 | None:intergenic | 20.0% |
| !!! | TTATATTTTCGTGAGTAAAT+TGG | - | chr1.1:73022487-73022506 | None:intergenic | 20.0% |
| !!! | TTCATCTTAAATGCATATTT+TGG | - | chr1.1:73021228-73021247 | None:intergenic | 20.0% |
| ! | AAACTCATAATTGTAGCATT+AGG | + | chr1.1:73021450-73021469 | MS.gene33855:intron | 25.0% |
| ! | AAATGCCAAAAAAGAACAAA+TGG | - | chr1.1:73021772-73021791 | None:intergenic | 25.0% |
| ! | AATTATTTATCACACGACAA+AGG | + | chr1.1:73022322-73022341 | MS.gene33855:intron | 25.0% |
| ! | ACCTATACAAAGCAATATAA+AGG | + | chr1.1:73020463-73020482 | MS.gene33855:intron | 25.0% |
| ! | AGTGTAAATTAAATGGTTCT+TGG | + | chr1.1:73021247-73021266 | MS.gene33855:intron | 25.0% |
| ! | ATATAAGCACTTAATTAACG+GGG | + | chr1.1:73020895-73020914 | MS.gene33855:intron | 25.0% |
| ! | ATTTGGTTAACTATAATGAC+AGG | + | chr1.1:73021788-73021807 | MS.gene33855:intron | 25.0% |
| ! | CGAACATACTTATATATTGT+TGG | + | chr1.1:73021202-73021221 | MS.gene33855:intron | 25.0% |
| ! | TTATGTTCAATATCCACTTA+TGG | + | chr1.1:73021958-73021977 | MS.gene33855:intron | 25.0% |
| ! | TTTAGTATAGGTATTTCAAG+AGG | - | chr1.1:73020962-73020981 | None:intergenic | 25.0% |
| ! | TTTGGTTAACTATAATGACA+GGG | + | chr1.1:73021789-73021808 | MS.gene33855:intron | 25.0% |
| !! | AAGTCTGTTTTGTATAAAGT+GGG | - | chr1.1:73021725-73021744 | None:intergenic | 25.0% |
| !! | ATTTCAAGTGATAGGATAAT+AGG | + | chr1.1:73021399-73021418 | MS.gene33855:intron | 25.0% |
| !! | TTTTCATACTTCATAGCTAA+AGG | + | chr1.1:73021371-73021390 | MS.gene33855:intron | 25.0% |
| !!! | ATTTGTTCTTTTTTGGCATT+TGG | + | chr1.1:73021771-73021790 | MS.gene33855:intron | 25.0% |
| !!! | CTAAACCATTTGTTCTTTTT+TGG | + | chr1.1:73021764-73021783 | MS.gene33855:intron | 25.0% |
| !!! | TTGATTCTTTTTCACTGTAT+AGG | + | chr1.1:73021501-73021520 | MS.gene33855:intron | 25.0% |
| !!! | TTTATTTTCCTATAGCTTTG+TGG | + | chr1.1:73020926-73020945 | MS.gene33855:intron | 25.0% |
| !!! | TTTTTGTTTAAGACAGCTTA+TGG | + | chr1.1:73020707-73020726 | MS.gene33855:intron | 25.0% |
| AAGAGCTTCTTCAGTATATT+TGG | - | chr1.1:73022119-73022138 | None:intergenic | 30.0% | |
| AATGAGAAGATAGTACACTT+TGG | - | chr1.1:73022658-73022677 | None:intergenic | 30.0% | |
| AATGAGCTGAAAACAACTTA+TGG | - | chr1.1:73020751-73020770 | None:intergenic | 30.0% | |
| AGAATAAAATGTGTTCACCA+AGG | - | chr1.1:73022452-73022471 | None:intergenic | 30.0% | |
| AGATTGAAGAGTAGATTATG+TGG | + | chr1.1:73021425-73021444 | MS.gene33855:intron | 30.0% | |
| ATGGTAAGGTCATTTAGTAT+AGG | - | chr1.1:73020974-73020993 | None:intergenic | 30.0% | |
| CAACTACTTGAATTCTCAAA+TGG | + | chr1.1:73020397-73020416 | MS.gene33855:CDS | 30.0% | |
| CATAATCTACTCTTCAATCT+TGG | - | chr1.1:73021425-73021444 | None:intergenic | 30.0% | |
| CTATTGATACTCAACATGTT+GGG | + | chr1.1:73020668-73020687 | MS.gene33855:CDS | 30.0% | |
| GAAATAACTGAAAGGACAAA+AGG | - | chr1.1:73021703-73021722 | None:intergenic | 30.0% | |
| GCCTTTATATTGCTTTGTAT+AGG | - | chr1.1:73020467-73020486 | None:intergenic | 30.0% | |
| GGTATATGACAATGTAAAAC+AGG | + | chr1.1:73021164-73021183 | MS.gene33855:CDS | 30.0% | |
| GTGGATATTGAACATAAACA+AGG | - | chr1.1:73021955-73021974 | None:intergenic | 30.0% | |
| TAAAGTGGGAAATAACTGAA+AGG | - | chr1.1:73021711-73021730 | None:intergenic | 30.0% | |
| TATACTAAATGACCTTACCA+TGG | + | chr1.1:73020973-73020992 | MS.gene33855:CDS | 30.0% | |
| TATTGATACTCAACATGTTG+GGG | + | chr1.1:73020669-73020688 | MS.gene33855:CDS | 30.0% | |
| TGAATTAGCAATAACAAACG+TGG | + | chr1.1:73021030-73021049 | MS.gene33855:intron | 30.0% | |
| TGTACTATCTTCTCATTATG+AGG | + | chr1.1:73022661-73022680 | MS.gene33855:intron | 30.0% | |
| TTAGTAGTAGCAGATTTAGT+CGG | - | chr1.1:73021748-73021767 | None:intergenic | 30.0% | |
| TTGAGAATTCAAGTAGTTGA+TGG | - | chr1.1:73020396-73020415 | None:intergenic | 30.0% | |
| ! | AGGAAACAATTTCAAGTGAT+AGG | + | chr1.1:73021391-73021410 | MS.gene33855:intron | 30.0% |
| ! | GAAGTCTGTTTTGTATAAAG+TGG | - | chr1.1:73021726-73021745 | None:intergenic | 30.0% |
| ! | TTTAAGACAGCTTATGGAAA+TGG | + | chr1.1:73020713-73020732 | MS.gene33855:intron | 30.0% |
| ! | TTTTACATTGTCATATACCG+CGG | - | chr1.1:73021163-73021182 | None:intergenic | 30.0% |
| AAAGTGAACTGTTGTACTAG+AGG | - | chr1.1:73022408-73022427 | None:intergenic | 35.0% | |
| AAGTGAACTGTTGTACTAGA+GGG | - | chr1.1:73022407-73022426 | None:intergenic | 35.0% | |
| ATCTGTGATATCATGCTTGA+TGG | - | chr1.1:73022707-73022726 | None:intergenic | 35.0% | |
| ATTACAACCTGTTCCACAAA+GGG | - | chr1.1:73020571-73020590 | None:intergenic | 35.0% | |
| ATTATCAGCATTCTGTGAGA+AGG | + | chr1.1:73021588-73021607 | MS.gene33855:CDS | 35.0% | |
| ATTCCACAATTTCGACATTG+CGG | - | chr1.1:73021890-73021909 | None:intergenic | 35.0% | |
| CTGCAACAATATTGATCCTA+TGG | - | chr1.1:73021838-73021857 | None:intergenic | 35.0% | |
| GCTATTGATACTCAACATGT+TGG | + | chr1.1:73020667-73020686 | MS.gene33855:CDS | 35.0% | |
| GTGGAACAGGTTGTAATAAA+TGG | + | chr1.1:73020574-73020593 | MS.gene33855:intron | 35.0% | |
| GTTAAGCTAACTTAACTGAC+TGG | + | chr1.1:73022020-73022039 | MS.gene33855:intron | 35.0% | |
| TAGAGAGATTGTTGGCAATT+TGG | - | chr1.1:73022174-73022193 | None:intergenic | 35.0% | |
| TATTACAACCTGTTCCACAA+AGG | - | chr1.1:73020572-73020591 | None:intergenic | 35.0% | |
| TGTAATAAATGGAGCAGCAA+AGG | + | chr1.1:73020585-73020604 | MS.gene33855:CDS | 35.0% | |
| TGTTATACAGGATCTTCCAT+CGG | + | chr1.1:73022138-73022157 | MS.gene33855:intron | 35.0% | |
| ! | AAATGACCTTACCATGGTTT+TGG | + | chr1.1:73020979-73020998 | MS.gene33855:CDS | 35.0% |
| ! | AATGACCTTACCATGGTTTT+GGG | + | chr1.1:73020980-73020999 | MS.gene33855:CDS | 35.0% |
| ! | ACCGTATCTAATTTGATTCG+CGG | - | chr1.1:73021562-73021581 | None:intergenic | 35.0% |
| ! | TCAATTTTCAACACCCTTTG+TGG | + | chr1.1:73020555-73020574 | MS.gene33855:intron | 35.0% |
| ! | TCTTACATTTGCATTAGCCT+TGG | - | chr1.1:73021913-73021932 | None:intergenic | 35.0% |
| ! | TGAAGAAGCTCTTGTTATAC+AGG | + | chr1.1:73022126-73022145 | MS.gene33855:intron | 35.0% |
| ! | TGTAAAACAGGTTTGAGTTC+TGG | + | chr1.1:73021176-73021195 | MS.gene33855:intron | 35.0% |
| !! | AGTACAACAGTTCACTTTTC+TGG | + | chr1.1:73022410-73022429 | MS.gene33855:CDS | 35.0% |
| !! | AGTAGTTGATGGAATGAAAC+TGG | - | chr1.1:73020385-73020404 | None:intergenic | 35.0% |
| !! | AGTTGTTTTCATAAGGCTAG+AGG | - | chr1.1:73020837-73020856 | None:intergenic | 35.0% |
| AATGGAGCAGCAAAGGAAAT+AGG | + | chr1.1:73020592-73020611 | MS.gene33855:CDS | 40.0% | |
| ACTGTATAGGCAACAGCATT+TGG | + | chr1.1:73021514-73021533 | MS.gene33855:intron | 40.0% | |
| AGATATAGAGCCCAAAACCA+TGG | - | chr1.1:73020993-73021012 | None:intergenic | 40.0% | |
| AGCAGTATTAGCTGTGACAA+AGG | + | chr1.1:73020621-73020640 | MS.gene33855:CDS | 40.0% | |
| AGGATCAATATTGTTGCAGC+AGG | + | chr1.1:73021839-73021858 | MS.gene33855:CDS | 40.0% | |
| CAACATGTTGGGGAAGATAT+TGG | + | chr1.1:73020679-73020698 | MS.gene33855:CDS | 40.0% | |
| CAATTTCGACATTGCGGTAA+TGG | - | chr1.1:73021884-73021903 | None:intergenic | 40.0% | |
| CTCTGTTATAGATTTGACCG+AGG | - | chr1.1:73022198-73022217 | None:intergenic | 40.0% | |
| GAATTGCAATTTGCAGTCCA+AGG | + | chr1.1:73021104-73021123 | MS.gene33855:intron | 40.0% | |
| GATGTACAATGTCTTATGCC+AGG | + | chr1.1:73022724-73022743 | MS.gene33855:CDS | 40.0% | |
| GCCGCGAATCAAATTAGATA+CGG | + | chr1.1:73021558-73021577 | MS.gene33855:CDS | 40.0% | |
| GGAATGAAACTGGCAACTTA+AGG | - | chr1.1:73020375-73020394 | None:intergenic | 40.0% | |
| TCTTCATTCCCAAACGAAGA+CGG | + | chr1.1:73022070-73022089 | MS.gene33855:intron | 40.0% | |
| TGTCGAAATTGTGGAATCCA+AGG | + | chr1.1:73021893-73021912 | MS.gene33855:CDS | 40.0% | |
| TTACCGCAATGTCGAAATTG+TGG | + | chr1.1:73021884-73021903 | MS.gene33855:CDS | 40.0% | |
| TTATCACACGACAAAGGCAA+GGG | + | chr1.1:73022328-73022347 | MS.gene33855:intron | 40.0% | |
| TTTATCACACGACAAAGGCA+AGG | + | chr1.1:73022327-73022346 | MS.gene33855:intron | 40.0% | |
| TTTCGATAAGCTTTCCACGA+TGG | + | chr1.1:73020769-73020788 | MS.gene33855:intron | 40.0% | |
| ! | ACTATAATGACAGGGTGTCT+TGG | + | chr1.1:73021797-73021816 | MS.gene33855:intron | 40.0% |
| ! | ATTGATCCTATGGAAAGCGT+TGG | - | chr1.1:73021828-73021847 | None:intergenic | 40.0% |
| !! | ACAGTTCACTTTTCTGGTCT+TGG | + | chr1.1:73022416-73022435 | MS.gene33855:CDS | 40.0% |
| !! | GTTGGCAATTTGGTTTGCTT+CGG | - | chr1.1:73022164-73022183 | None:intergenic | 40.0% |
| !! | GTTGTTTTCATAAGCCATCG+TGG | - | chr1.1:73020786-73020805 | None:intergenic | 40.0% |
| !! | TTTCCTATAGCTTTGTGGCA+TGG | + | chr1.1:73020931-73020950 | MS.gene33855:intron | 40.0% |
| !!! | TGCACAGTTTGGTTTTACCA+GGG | + | chr1.1:73022378-73022397 | MS.gene33855:CDS | 40.0% |
| ACATTGTCATATACCGCGGA+AGG | - | chr1.1:73021159-73021178 | None:intergenic | 45.0% | |
| ACCGAGGTTAGAGAGATTGT+TGG | - | chr1.1:73022182-73022201 | None:intergenic | 45.0% | |
| ACCTTTCTCCGTCTTCGTTT+GGG | - | chr1.1:73022081-73022100 | None:intergenic | 45.0% | |
| AGACTCCTCAACAGATGTCT+TGG | + | chr1.1:73022219-73022238 | MS.gene33855:CDS | 45.0% | |
| CATTGTCATATACCGCGGAA+GGG | - | chr1.1:73021158-73021177 | None:intergenic | 45.0% | |
| CCTCAACAGATGTCTTGGTA+AGG | + | chr1.1:73022224-73022243 | MS.gene33855:intron | 45.0% | |
| CCTTACCAAGACATCTGTTG+AGG | - | chr1.1:73022227-73022246 | None:intergenic | 45.0% | |
| CTAATGGCTATCAACAAGCC+TGG | - | chr1.1:73022745-73022764 | None:intergenic | 45.0% | |
| CTTCCATGCCACAAAGCTAT+AGG | - | chr1.1:73020937-73020956 | None:intergenic | 45.0% | |
| GCCAACAATCTCTCTAACCT+CGG | + | chr1.1:73022178-73022197 | MS.gene33855:CDS | 45.0% | |
| TAGAGCCCAAAACCATGGTA+AGG | - | chr1.1:73020988-73021007 | None:intergenic | 45.0% | |
| TATCACACGACAAAGGCAAG+GGG | + | chr1.1:73022329-73022348 | MS.gene33855:intron | 45.0% | |
| TGTTGGGGAAGATATTGGAC+AGG | + | chr1.1:73020684-73020703 | MS.gene33855:CDS | 45.0% | |
| TTCAACACCCTTTGTGGAAC+AGG | + | chr1.1:73020561-73020580 | MS.gene33855:intron | 45.0% | |
| TTGTATAGGTTGTGCTGTGC+AGG | - | chr1.1:73020453-73020472 | None:intergenic | 45.0% | |
| ! | AAAGGCAAGGGGTCAAGTTT+TGG | + | chr1.1:73022340-73022359 | MS.gene33855:intron | 45.0% |
| ! | AAGGCAAGGGGTCAAGTTTT+GGG | + | chr1.1:73022341-73022360 | MS.gene33855:intron | 45.0% |
| !! | GAGGCGCACTACTTTTCTAA+TGG | - | chr1.1:73022761-73022780 | None:intergenic | 45.0% |
| !!! | GGTTTTGGGCTCTATATCTC+AGG | + | chr1.1:73020994-73021013 | MS.gene33855:CDS | 45.0% |
| !!! | GTGCACAGTTTGGTTTTACC+AGG | + | chr1.1:73022377-73022396 | MS.gene33855:CDS | 45.0% |
| !!! | TCACTTTTCTGGTCTTGGAG+AGG | + | chr1.1:73022421-73022440 | MS.gene33855:CDS | 45.0% |
| ATTCTGTGAGAAGGCCAGCA+TGG | + | chr1.1:73021597-73021616 | MS.gene33855:CDS | 50.0% | |
| GAAATCGACTACAACCGCTG+TGG | - | chr1.1:73021130-73021149 | None:intergenic | 50.0% | |
| GACCTTTCTCCGTCTTCGTT+TGG | - | chr1.1:73022082-73022101 | None:intergenic | 50.0% | |
| GTTGCTCCAACGCTTTCCAT+AGG | + | chr1.1:73021819-73021838 | MS.gene33855:CDS | 50.0% | |
| TCCAGCAACTTCCATTCCTC+TGG | - | chr1.1:73020647-73020666 | None:intergenic | 50.0% | |
| TCCCAAACGAAGACGGAGAA+AGG | + | chr1.1:73022077-73022096 | MS.gene33855:intron | 50.0% | |
| TGGAATTCGCGTGCACAGTT+TGG | + | chr1.1:73022367-73022386 | MS.gene33855:CDS | 50.0% | |
| TGTGACAAAGGCCAGAGGAA+TGG | + | chr1.1:73020633-73020652 | MS.gene33855:CDS | 50.0% | |
| TTAGCTGTGACAAAGGCCAG+AGG | + | chr1.1:73020628-73020647 | MS.gene33855:CDS | 50.0% | |
| ! | GTCTTGGAGAGGTATGTCCT+TGG | + | chr1.1:73022432-73022451 | MS.gene33855:intron | 50.0% |
| !! | ATTTGGTTTGCTTCGGCCGA+TGG | - | chr1.1:73022157-73022176 | None:intergenic | 50.0% |
| !!! | AGGGGTCAAGTTTTGGGAGA+TGG | + | chr1.1:73022347-73022366 | MS.gene33855:CDS | 50.0% |
| AAGGCCAGCATGGTGAGCAA+GGG | + | chr1.1:73021607-73021626 | MS.gene33855:intron | 55.0% | |
| CGATTTCACTGACCCTTCCG+CGG | + | chr1.1:73021143-73021162 | MS.gene33855:CDS | 55.0% | |
| GCCAGAGGAATGGAAGTTGC+TGG | + | chr1.1:73020643-73020662 | MS.gene33855:CDS | 55.0% | |
| GTTGTACTAGAGGGAAGCCC+TGG | - | chr1.1:73022398-73022417 | None:intergenic | 55.0% | |
| TTTGCAGTCCAAGGCCACAG+CGG | + | chr1.1:73021113-73021132 | MS.gene33855:intron | 55.0% | |
| AGGCCAGCATGGTGAGCAAG+GGG | + | chr1.1:73021608-73021627 | MS.gene33855:intron | 60.0% | |
| GAAGGCCAGCATGGTGAGCA+AGG | + | chr1.1:73021606-73021625 | MS.gene33855:intron | 60.0% | |
| GACTACAACCGCTGTGGCCT+TGG | - | chr1.1:73021124-73021143 | None:intergenic | 60.0% | |
| TCACCCCTTGCTCACCATGC+TGG | - | chr1.1:73021614-73021633 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 73020365 | 73022783 | 73020365 | ID=MS.gene33855 |
| chr1.1 | mRNA | 73020365 | 73022783 | 73020365 | ID=MS.gene33855.t1;Parent=MS.gene33855 |
| chr1.1 | exon | 73020365 | 73020418 | 73020365 | ID=MS.gene33855.t1.exon1;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73020365 | 73020418 | 73020365 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73020583 | 73020705 | 73020583 | ID=MS.gene33855.t1.exon2;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73020583 | 73020705 | 73020583 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73020941 | 73021015 | 73020941 | ID=MS.gene33855.t1.exon3;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73020941 | 73021015 | 73020941 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73021120 | 73021185 | 73021120 | ID=MS.gene33855.t1.exon4;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73021120 | 73021185 | 73021120 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73021523 | 73021618 | 73021523 | ID=MS.gene33855.t1.exon5;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73021523 | 73021618 | 73021523 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73021810 | 73021926 | 73021810 | ID=MS.gene33855.t1.exon6;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73021810 | 73021926 | 73021810 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73022148 | 73022240 | 73022148 | ID=MS.gene33855.t1.exon7;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73022148 | 73022240 | 73022148 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73022344 | 73022442 | 73022344 | ID=MS.gene33855.t1.exon8;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73022344 | 73022442 | 73022344 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| chr1.1 | exon | 73022697 | 73022783 | 73022697 | ID=MS.gene33855.t1.exon9;Parent=MS.gene33855.t1 |
| chr1.1 | CDS | 73022697 | 73022783 | 73022697 | ID=cds.MS.gene33855.t1;Parent=MS.gene33855.t1 |
| Gene Sequence |
| Protein sequence |
