Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36648.t1 | AFK46665.1 | 86.9 | 268 | 8 | 1 | 1 | 241 | 1 | 268 | 6.50E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36648.t1 | O04603 | 62.6 | 262 | 65 | 4 | 4 | 235 | 3 | 261 | 1.8e-77 | 290.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36648.t1 | G7L6M1 | 86.9 | 268 | 8 | 1 | 1 | 241 | 1 | 268 | 4.7e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene36648 | 0.808676 | 2.76E-50 | -1.69E-46 |
| MS.gene049284 | MS.gene36648 | 0.85287 | 3.48E-61 | -1.69E-46 |
| MS.gene049346 | MS.gene36648 | 0.812279 | 4.59E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene36648 | 0.912418 | 1.99E-83 | -1.69E-46 |
| MS.gene049356 | MS.gene36648 | 0.809377 | 1.95E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene36648 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene36648 | 0.855952 | 4.47E-62 | -1.69E-46 |
| MS.gene049427 | MS.gene36648 | 0.869437 | 3.10E-66 | -1.69E-46 |
| MS.gene049491 | MS.gene36648 | 0.892086 | 2.20E-74 | -1.69E-46 |
| MS.gene049614 | MS.gene36648 | 0.854226 | 1.42E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene36648 | 0.884912 | 1.28E-71 | -1.69E-46 |
| MS.gene049662 | MS.gene36648 | 0.882663 | 8.62E-71 | -1.69E-46 |
| MS.gene049758 | MS.gene36648 | 0.901192 | 3.43E-78 | -1.69E-46 |
| MS.gene049760 | MS.gene36648 | 0.846903 | 1.62E-59 | -1.69E-46 |
| MS.gene049910 | MS.gene36648 | 0.803357 | 3.62E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene36648 | 0.898252 | 6.36E-77 | -1.69E-46 |
| MS.gene050099 | MS.gene36648 | 0.888151 | 7.61E-73 | -1.69E-46 |
| MS.gene050128 | MS.gene36648 | 0.861939 | 7.21E-64 | -1.69E-46 |
| MS.gene050231 | MS.gene36648 | 0.815291 | 9.97E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene36648 | 0.944833 | 9.41E-104 | -1.69E-46 |
| MS.gene050397 | MS.gene36648 | 0.882979 | 6.61E-71 | -1.69E-46 |
| MS.gene050404 | MS.gene36648 | 0.826553 | 2.55E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene36648 | 0.831249 | 1.86E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene36648 | 0.872863 | 2.29E-67 | -1.69E-46 |
| MS.gene050464 | MS.gene36648 | 0.862781 | 3.97E-64 | -1.69E-46 |
| MS.gene050529 | MS.gene36648 | 0.887156 | 1.83E-72 | -1.69E-46 |
| MS.gene05053 | MS.gene36648 | 0.81676 | 4.68E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene36648 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene36648 | 0.857623 | 1.44E-62 | -1.69E-46 |
| MS.gene050767 | MS.gene36648 | 0.883121 | 5.86E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene36648 | 0.885261 | 9.47E-72 | -1.69E-46 |
| MS.gene050783 | MS.gene36648 | 0.846473 | 2.12E-59 | -1.69E-46 |
| MS.gene050812 | MS.gene36648 | 0.851371 | 9.27E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene36648 | 0.934697 | 2.70E-96 | -1.69E-46 |
| MS.gene05105 | MS.gene36648 | 0.847129 | 1.41E-59 | -1.69E-46 |
| MS.gene051255 | MS.gene36648 | 0.817318 | 3.51E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene36648 | 0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene36648 | 0.911014 | 9.82E-83 | -1.69E-46 |
| MS.gene051582 | MS.gene36648 | 0.829398 | 5.26E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene36648 | 0.839219 | 1.81E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene36648 | 0.866708 | 2.34E-65 | -1.69E-46 |
| MS.gene051666 | MS.gene36648 | 0.825682 | 4.10E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene36648 | 0.809956 | 1.46E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene36648 | 0.852225 | 5.31E-61 | -1.69E-46 |
| MS.gene051877 | MS.gene36648 | 0.866507 | 2.71E-65 | -1.69E-46 |
| MS.gene052078 | MS.gene36648 | 0.927593 | 9.47E-92 | -1.69E-46 |
| MS.gene052178 | MS.gene36648 | 0.881464 | 2.35E-70 | -1.69E-46 |
| MS.gene052188 | MS.gene36648 | 0.895679 | 7.62E-76 | -1.69E-46 |
| MS.gene052207 | MS.gene36648 | 0.866453 | 2.82E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene36648 | 0.863353 | 2.64E-64 | -1.69E-46 |
| MS.gene052271 | MS.gene36648 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene052287 | MS.gene36648 | 0.85028 | 1.88E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene36648 | 0.853981 | 1.67E-61 | -1.69E-46 |
| MS.gene052293 | MS.gene36648 | 0.814541 | 1.46E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene36648 | 0.910613 | 1.54E-82 | -1.69E-46 |
| MS.gene052322 | MS.gene36648 | 0.835494 | 1.62E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene36648 | 0.923598 | 2.15E-89 | -1.69E-46 |
| MS.gene052340 | MS.gene36648 | 0.869678 | 2.59E-66 | -1.69E-46 |
| MS.gene052379 | MS.gene36648 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene36648 | 0.819716 | 1.00E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene36648 | 0.827656 | 1.39E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene36648 | 0.82506 | 5.76E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene36648 | 0.865964 | 4.03E-65 | -1.69E-46 |
| MS.gene053009 | MS.gene36648 | 0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene36648 | 0.833419 | 5.39E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene36648 | 0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene36648 | 0.810433 | 1.16E-50 | -1.69E-46 |
| MS.gene053181 | MS.gene36648 | 0.810928 | 9.03E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene36648 | 0.87014 | 1.83E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene36648 | 0.882853 | 7.35E-71 | -1.69E-46 |
| MS.gene053557 | MS.gene36648 | 0.866868 | 2.08E-65 | -1.69E-46 |
| MS.gene053559 | MS.gene36648 | 0.822864 | 1.89E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene36648 | 0.80006 | 1.72E-48 | -1.69E-46 |
| MS.gene053813 | MS.gene36648 | 0.819799 | 9.61E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene36648 | 0.906699 | 1.12E-80 | -1.69E-46 |
| MS.gene053907 | MS.gene36648 | 0.840919 | 6.51E-58 | -1.69E-46 |
| MS.gene053928 | MS.gene36648 | 0.819312 | 1.24E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene36648 | 0.825598 | 4.29E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene36648 | 0.828177 | 1.04E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene36648 | 0.851388 | 9.17E-61 | -1.69E-46 |
| MS.gene054012 | MS.gene36648 | 0.835993 | 1.21E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene36648 | 0.833186 | 6.16E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene36648 | 0.901101 | 3.76E-78 | -1.69E-46 |
| MS.gene054214 | MS.gene36648 | 0.817637 | 2.97E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene36648 | 0.896495 | 3.49E-76 | -1.69E-46 |
| MS.gene054473 | MS.gene36648 | 0.843499 | 1.35E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene36648 | 0.900461 | 7.16E-78 | -1.69E-46 |
| MS.gene054618 | MS.gene36648 | 0.80151 | 8.70E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene36648 | 0.894829 | 1.71E-75 | -1.69E-46 |
| MS.gene054803 | MS.gene36648 | 0.894389 | 2.58E-75 | -1.69E-46 |
| MS.gene054804 | MS.gene36648 | 0.895622 | 8.04E-76 | -1.69E-46 |
| MS.gene054955 | MS.gene36648 | 0.845549 | 3.79E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene36648 | 0.814084 | 1.84E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene36648 | 0.806402 | 8.37E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene36648 | 0.875051 | 4.18E-68 | -1.69E-46 |
| MS.gene055254 | MS.gene36648 | 0.861295 | 1.13E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene36648 | 0.925285 | 2.26E-90 | -1.69E-46 |
| MS.gene055303 | MS.gene36648 | 0.814255 | 1.69E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene36648 | 0.927846 | 6.64E-92 | -1.69E-46 |
| MS.gene055397 | MS.gene36648 | 0.865959 | 4.05E-65 | -1.69E-46 |
| MS.gene055412 | MS.gene36648 | 0.844381 | 7.83E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene36648 | 0.936429 | 1.76E-97 | -1.69E-46 |
| MS.gene055428 | MS.gene36648 | 0.906224 | 1.87E-80 | -1.69E-46 |
| MS.gene055499 | MS.gene36648 | 0.874576 | 6.06E-68 | -1.69E-46 |
| MS.gene055533 | MS.gene36648 | 0.814281 | 1.67E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene36648 | 0.803521 | 3.35E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene36648 | 0.86384 | 1.87E-64 | -1.69E-46 |
| MS.gene055647 | MS.gene36648 | 0.817655 | 2.95E-52 | -1.69E-46 |
| MS.gene055712 | MS.gene36648 | 0.840791 | 7.03E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene36648 | 0.866107 | 3.63E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene36648 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene36648 | 0.811374 | 7.23E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene36648 | 0.838069 | 3.58E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene36648 | 0.878278 | 3.20E-69 | -1.69E-46 |
| MS.gene056314 | MS.gene36648 | 0.82415 | 9.43E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene36648 | 0.883519 | 4.19E-71 | -1.69E-46 |
| MS.gene056410 | MS.gene36648 | 0.884586 | 1.69E-71 | -1.69E-46 |
| MS.gene056452 | MS.gene36648 | 0.827529 | 1.49E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene36648 | 0.882139 | 1.34E-70 | -1.69E-46 |
| MS.gene056612 | MS.gene36648 | 0.901414 | 2.74E-78 | -1.69E-46 |
| MS.gene056659 | MS.gene36648 | 0.831977 | 1.23E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene36648 | 0.860205 | 2.43E-63 | -1.69E-46 |
| MS.gene056897 | MS.gene36648 | 0.814395 | 1.57E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene36648 | -0.802884 | 4.54E-49 | -1.69E-46 |
| MS.gene056902 | MS.gene36648 | 0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene056931 | MS.gene36648 | 0.851585 | 8.06E-61 | -1.69E-46 |
| MS.gene056933 | MS.gene36648 | 0.849578 | 2.96E-60 | -1.69E-46 |
| MS.gene056935 | MS.gene36648 | 0.843374 | 1.46E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene36648 | 0.861658 | 8.79E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene36648 | 0.875855 | 2.22E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene36648 | 0.882309 | 1.16E-70 | -1.69E-46 |
| MS.gene057123 | MS.gene36648 | 0.868348 | 6.98E-66 | -1.69E-46 |
| MS.gene057124 | MS.gene36648 | 0.81141 | 7.10E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene36648 | 0.861069 | 1.33E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene36648 | 0.860273 | 2.32E-63 | -1.69E-46 |
| MS.gene057245 | MS.gene36648 | 0.868113 | 8.31E-66 | -1.69E-46 |
| MS.gene057295 | MS.gene36648 | 0.878083 | 3.74E-69 | -1.69E-46 |
| MS.gene05733 | MS.gene36648 | 0.864799 | 9.38E-65 | -1.69E-46 |
| MS.gene05735 | MS.gene36648 | 0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene057370 | MS.gene36648 | 0.800031 | 1.74E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene36648 | 0.877825 | 4.60E-69 | -1.69E-46 |
| MS.gene057448 | MS.gene36648 | 0.851456 | 8.77E-61 | -1.69E-46 |
| MS.gene057449 | MS.gene36648 | 0.849246 | 3.66E-60 | -1.69E-46 |
| MS.gene057450 | MS.gene36648 | 0.860687 | 1.74E-63 | -1.69E-46 |
| MS.gene057469 | MS.gene36648 | 0.815796 | 7.70E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene36648 | 0.831165 | 1.95E-55 | -1.69E-46 |
| MS.gene057779 | MS.gene36648 | 0.826145 | 3.19E-54 | -1.69E-46 |
| MS.gene057796 | MS.gene36648 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene36648 | 0.83041 | 2.98E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene36648 | 0.906675 | 1.15E-80 | -1.69E-46 |
| MS.gene058019 | MS.gene36648 | 0.819277 | 1.26E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene36648 | 0.879224 | 1.48E-69 | -1.69E-46 |
| MS.gene05811 | MS.gene36648 | 0.908835 | 1.11E-81 | -1.69E-46 |
| MS.gene058142 | MS.gene36648 | 0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene36648 | 0.872236 | 3.71E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene36648 | 0.830554 | 2.75E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene36648 | 0.921448 | 3.53E-88 | -1.69E-46 |
| MS.gene058323 | MS.gene36648 | 0.812095 | 5.04E-51 | -1.69E-46 |
| MS.gene058365 | MS.gene36648 | 0.861912 | 7.35E-64 | -1.69E-46 |
| MS.gene05842 | MS.gene36648 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene36648 | 0.975466 | 5.28E-140 | -1.69E-46 |
| MS.gene058749 | MS.gene36648 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene058787 | MS.gene36648 | 0.872567 | 2.88E-67 | -1.69E-46 |
| MS.gene058845 | MS.gene36648 | 0.855833 | 4.84E-62 | -1.69E-46 |
| MS.gene05886 | MS.gene36648 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene36648 | 0.849404 | 3.30E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene36648 | 0.85404 | 1.60E-61 | -1.69E-46 |
| MS.gene05907 | MS.gene36648 | 0.910464 | 1.82E-82 | -1.69E-46 |
| MS.gene059228 | MS.gene36648 | 0.827226 | 1.76E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene36648 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene059294 | MS.gene36648 | 0.849209 | 3.74E-60 | -1.69E-46 |
| MS.gene059326 | MS.gene36648 | 0.86085 | 1.55E-63 | -1.69E-46 |
| MS.gene059342 | MS.gene36648 | 0.866062 | 3.75E-65 | -1.69E-46 |
| MS.gene059366 | MS.gene36648 | 0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene36648 | 0.814973 | 1.17E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene36648 | 0.888406 | 6.07E-73 | -1.69E-46 |
| MS.gene059536 | MS.gene36648 | 0.889352 | 2.62E-73 | -1.69E-46 |
| MS.gene059597 | MS.gene36648 | 0.915712 | 4.25E-85 | -1.69E-46 |
| MS.gene05959 | MS.gene36648 | 0.858642 | 7.16E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene36648 | 0.903165 | 4.60E-79 | -1.69E-46 |
| MS.gene059688 | MS.gene36648 | 0.905368 | 4.62E-80 | -1.69E-46 |
| MS.gene059692 | MS.gene36648 | 0.913705 | 4.51E-84 | -1.69E-46 |
| MS.gene059695 | MS.gene36648 | 0.912651 | 1.53E-83 | -1.69E-46 |
| MS.gene059708 | MS.gene36648 | 0.861477 | 9.98E-64 | -1.69E-46 |
| MS.gene059711 | MS.gene36648 | 0.8079 | 4.03E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene36648 | 0.891344 | 4.33E-74 | -1.69E-46 |
| MS.gene059894 | MS.gene36648 | 0.892497 | 1.50E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene36648 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene36648 | 0.894513 | 2.30E-75 | -1.69E-46 |
| MS.gene059974 | MS.gene36648 | 0.840409 | 8.85E-58 | -1.69E-46 |
| MS.gene060005 | MS.gene36648 | 0.859102 | 5.22E-63 | -1.69E-46 |
| MS.gene060193 | MS.gene36648 | 0.801899 | 7.24E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene36648 | 0.893426 | 6.36E-75 | -1.69E-46 |
| MS.gene060403 | MS.gene36648 | 0.821573 | 3.76E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene36648 | 0.835787 | 1.37E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene36648 | 0.827865 | 1.24E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene36648 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene36648 | 0.858462 | 8.10E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene36648 | 0.851599 | 7.99E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene36648 | 0.830139 | 3.47E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene36648 | 0.807401 | 5.15E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene36648 | 0.866213 | 3.36E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene36648 | 0.83322 | 6.04E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene36648 | 0.911255 | 7.48E-83 | -1.69E-46 |
| MS.gene061051 | MS.gene36648 | -0.883209 | 5.44E-71 | -1.69E-46 |
| MS.gene061112 | MS.gene36648 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene36648 | 0.803071 | 4.15E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene36648 | 0.893269 | 7.36E-75 | -1.69E-46 |
| MS.gene061265 | MS.gene36648 | 0.80964 | 1.71E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36648 | MS.gene039830 | PPI |
| MS.gene36648 | MS.gene73087 | PPI |
| MS.gene36648 | MS.gene044695 | PPI |
| MS.gene36648 | MS.gene039829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36648.t1 | MTR_7g078800 | 86.940 | 268 | 8 | 1 | 1 | 241 | 1 | 268 | 1.03e-168 | 466 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36648.t1 | AT4G01310 | 62.595 | 262 | 65 | 4 | 4 | 235 | 3 | 261 | 2.57e-106 | 308 |
Find 62 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTCTACCCTTTGATTT+TGG | 0.123648 | 7.3:-28436122 | None:intergenic |
| GAATTACAACATTGGTATTA+AGG | 0.259700 | 7.3:+28435908 | MS.gene36648:CDS |
| ACAACGAAGAAGAAGAGAAT+TGG | 0.342752 | 7.3:-28433070 | None:intergenic |
| ACCACAATCTTCTTAACTTT+AGG | 0.360933 | 7.3:-28434129 | None:intergenic |
| TCTGTGAAAGCTGATGCTTC+TGG | 0.361039 | 7.3:+28433119 | MS.gene36648:CDS |
| TTGAATATCAGCAGCTTTGA+TGG | 0.369608 | 7.3:+28435879 | MS.gene36648:CDS |
| TCTTCTTCGTTGTTCTCTCA+TGG | 0.377778 | 7.3:+28433080 | MS.gene36648:CDS |
| TCAGCTCTGGGAACACAGTT+TGG | 0.396548 | 7.3:-28435932 | None:intergenic |
| TGATGCTTCTGGTGCTGTAT+TGG | 0.397654 | 7.3:+28433130 | MS.gene36648:CDS |
| TTCCTCGCCCGAGTCTTAAC+AGG | 0.398404 | 7.3:-28434237 | None:intergenic |
| TTGACCTTCCCTGATCTTGA+AGG | 0.406375 | 7.3:-28434271 | None:intergenic |
| CCGTTGCCACCTTCAAGATC+AGG | 0.407745 | 7.3:+28434262 | MS.gene36648:CDS |
| CCTATACCAGATTTCAGCTC+TGG | 0.422499 | 7.3:-28435945 | None:intergenic |
| CAACGAAGAAGAAGAGAATT+GGG | 0.435438 | 7.3:-28433069 | None:intergenic |
| GTGTTCCCAGAGCTGAAATC+TGG | 0.439069 | 7.3:+28435939 | MS.gene36648:CDS |
| TGCACAAAATGCAAAAGGTT+TGG | 0.451207 | 7.3:+28434173 | MS.gene36648:CDS |
| AGCTCGAAATTGAGAGAGAA+AGG | 0.454415 | 7.3:-28433039 | None:intergenic |
| TGCTTCTGGTGCTGTATTGG+TGG | 0.457226 | 7.3:+28433133 | MS.gene36648:CDS |
| CTTGATCTAGCACTGATCAC+TGG | 0.459647 | 7.3:+28434207 | MS.gene36648:CDS |
| CAGAAGAGTGTAGAAGAGAA+GGG | 0.460397 | 7.3:-28433010 | None:intergenic |
| CTAAGTTGATAACGCGGTCT+AGG | 0.460763 | 7.3:-28435827 | None:intergenic |
| GCAGAAGAGTGTAGAAGAGA+AGG | 0.463128 | 7.3:-28433011 | None:intergenic |
| CCTTGAAAATCTCTTGTCCT+AGG | 0.465103 | 7.3:-28435855 | None:intergenic |
| ATCAGCAGCTTTGATGGGAA+TGG | 0.466511 | 7.3:+28435885 | MS.gene36648:CDS |
| TTATCAACTTAGGACTTCCT+AGG | 0.473041 | 7.3:+28435838 | MS.gene36648:CDS |
| CTAGACCGCGTTATCAACTT+AGG | 0.474580 | 7.3:+28435828 | MS.gene36648:CDS |
| CCAGAGCTGAAATCTGGTAT+AGG | 0.476827 | 7.3:+28435945 | MS.gene36648:CDS |
| ATTGTGGTAAACTGTGGTAT+TGG | 0.479842 | 7.3:+28434144 | MS.gene36648:CDS |
| ATCAGGGAAGGTCAACCACT+TGG | 0.482119 | 7.3:+28434279 | MS.gene36648:CDS |
| TCAGCAGCTTTGATGGGAAT+GGG | 0.496382 | 7.3:+28435886 | MS.gene36648:CDS |
| GAAGCTGCACAAAATGCAAA+AGG | 0.526930 | 7.3:+28434168 | MS.gene36648:CDS |
| AACTTCAACTCCCTCTCTGA+AGG | 0.527309 | 7.3:-28436054 | None:intergenic |
| GAAGAAGAAGAGAATTGGGT+TGG | 0.530860 | 7.3:-28433065 | None:intergenic |
| GATCCAAAATCAAAGGGTAG+AGG | 0.531994 | 7.3:+28436119 | MS.gene36648:CDS |
| TTGATCTAGCACTGATCACT+GGG | 0.532729 | 7.3:+28434208 | MS.gene36648:CDS |
| CCTGATCTTGAAGGTGGCAA+CGG | 0.533580 | 7.3:-28434262 | None:intergenic |
| TGAATATCAGCAGCTTTGAT+GGG | 0.536920 | 7.3:+28435880 | MS.gene36648:CDS |
| CGTTGCCACCTTCAAGATCA+GGG | 0.545237 | 7.3:+28434263 | MS.gene36648:CDS |
| GGCAGAGACCTGTTAAGACT+CGG | 0.549649 | 7.3:+28434229 | MS.gene36648:CDS |
| GGAGAAATCTGAAGCAGAGA+AGG | 0.557353 | 7.3:+28433154 | MS.gene36648:CDS |
| AGAAGAGTGTAGAAGAGAAG+GGG | 0.566918 | 7.3:-28433009 | None:intergenic |
| TATAGGTACACCTAGAGGAA+TGG | 0.575467 | 7.3:+28435962 | MS.gene36648:CDS |
| CTCTCATGGAAACAACAGAC+TGG | 0.584243 | 7.3:+28433094 | MS.gene36648:CDS |
| ACCTTCCCTGATCTTGAAGG+TGG | 0.584511 | 7.3:-28434268 | None:intergenic |
| ATGCAGATATCCATTCCTCT+AGG | 0.588286 | 7.3:-28435972 | None:intergenic |
| CTATACCAGATTTCAGCTCT+GGG | 0.594159 | 7.3:-28435944 | None:intergenic |
| TCCTTCTTGATCAGTTCTAG+CGG | 0.602168 | 7.3:-28436003 | None:intergenic |
| ATGGGTATGCCCTTCAGAGA+GGG | 0.602286 | 7.3:+28436044 | MS.gene36648:CDS |
| GCAGAGACCTGTTAAGACTC+GGG | 0.607855 | 7.3:+28434230 | MS.gene36648:CDS |
| AAGAAGATTGTGGTAAACTG+TGG | 0.615390 | 7.3:+28434138 | MS.gene36648:CDS |
| ACTTCAACTCCCTCTCTGAA+GGG | 0.615523 | 7.3:-28436053 | None:intergenic |
| GGGATTGCTGTGACACTCAG+AGG | 0.615781 | 7.3:+28434300 | MS.gene36648:CDS |
| TCAGGGAAGGTCAACCACTT+GGG | 0.616213 | 7.3:+28434280 | MS.gene36648:CDS |
| GCCACCTTCAAGATCAGGGA+AGG | 0.616261 | 7.3:+28434267 | MS.gene36648:CDS |
| GGGAATGGGAATTACAACAT+TGG | 0.626171 | 7.3:+28435900 | MS.gene36648:CDS |
| ACCGCTAGAACTGATCAAGA+AGG | 0.627372 | 7.3:+28436002 | MS.gene36648:CDS |
| GCCTAAAGTTAAGAAGATTG+TGG | 0.634345 | 7.3:+28434128 | MS.gene36648:CDS |
| GACCTGTTAAGACTCGGGCG+AGG | 0.646443 | 7.3:+28434235 | MS.gene36648:CDS |
| CATGGGTATGCCCTTCAGAG+AGG | 0.660728 | 7.3:+28436043 | MS.gene36648:CDS |
| AGTGTCACAGCAATCCCAAG+TGG | 0.690222 | 7.3:-28434294 | None:intergenic |
| TCTGGTATAGGTACACCTAG+AGG | 0.713169 | 7.3:+28435957 | MS.gene36648:CDS |
| GAAGTCCTAAGTTGATAACG+CGG | 0.748246 | 7.3:-28435833 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAAATAGTATAAAAAA+TGG | - | chr7.3:28434423-28434442 | None:intergenic | 10.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | - | chr7.3:28434744-28434763 | None:intergenic | 10.0% |
| !! | TACTAAATAGTATAAAAAAT+GGG | - | chr7.3:28434422-28434441 | None:intergenic | 10.0% |
| !! | ACAAAATAATATTTGATCAT+TGG | - | chr7.3:28435289-28435308 | None:intergenic | 15.0% |
| !! | TAATGCAAAATACTATAATT+TGG | - | chr7.3:28435534-28435553 | None:intergenic | 15.0% |
| !!! | ATTCTTATGGTTTTAAAATA+TGG | - | chr7.3:28435712-28435731 | None:intergenic | 15.0% |
| !! | GCATGTATAATATATTCTTA+TGG | - | chr7.3:28435725-28435744 | None:intergenic | 20.0% |
| !! | GTTAACAAAATATATTCACT+AGG | - | chr7.3:28434363-28434382 | None:intergenic | 20.0% |
| !! | TAAAGATGTTCATAAGATAT+AGG | + | chr7.3:28435016-28435035 | MS.gene36648:intron | 20.0% |
| !! | TATTTGAATATGTTGTCATT+TGG | + | chr7.3:28435458-28435477 | MS.gene36648:intron | 20.0% |
| !!! | AATTTGAAACTAAGTGAATA+AGG | + | chr7.3:28433899-28433918 | MS.gene36648:intron | 20.0% |
| !!! | ATGACATTAAGTTGATAAAT+CGG | + | chr7.3:28433871-28433890 | MS.gene36648:intron | 20.0% |
| !!! | GCATTTTCAAAAATTCATTT+TGG | - | chr7.3:28433803-28433822 | None:intergenic | 20.0% |
| !!! | TTTAGTATTTAGAACAATGT+CGG | + | chr7.3:28434435-28434454 | MS.gene36648:intron | 20.0% |
| !!! | TTTTTTGGTTTTGGTTTAAT+GGG | + | chr7.3:28433357-28433376 | MS.gene36648:intron | 20.0% |
| ! | AAAAATTGTTCCTTTGCTTA+TGG | + | chr7.3:28433205-28433224 | MS.gene36648:intron | 25.0% |
| ! | CAATGTGATCTAAGTTTAAA+TGG | - | chr7.3:28434990-28435009 | None:intergenic | 25.0% |
| ! | CTCTTTAAGTAGAATCAATT+CGG | + | chr7.3:28433688-28433707 | MS.gene36648:intron | 25.0% |
| ! | GAATTACAACATTGGTATTA+AGG | + | chr7.3:28435908-28435927 | MS.gene36648:CDS | 25.0% |
| ! | TAACACAGGATGTTTAATAT+CGG | + | chr7.3:28435570-28435589 | MS.gene36648:intron | 25.0% |
| ! | TCAAGAAGGACAAAAATTAT+TGG | + | chr7.3:28436016-28436035 | MS.gene36648:CDS | 25.0% |
| ! | TTCATATTACTTAAATAGGC+CGG | - | chr7.3:28434740-28434759 | None:intergenic | 25.0% |
| ! | TTGCAATATCCATAATTTGA+GGG | - | chr7.3:28433427-28433446 | None:intergenic | 25.0% |
| ! | TTTGCAATATCCATAATTTG+AGG | - | chr7.3:28433428-28433447 | None:intergenic | 25.0% |
| !! | AACCAATAGGTATTAGATTT+TGG | - | chr7.3:28435781-28435800 | None:intergenic | 25.0% |
| !! | AATTGATTCTACTTAAAGAG+AGG | - | chr7.3:28433688-28433707 | None:intergenic | 25.0% |
| !! | ACAGTTAAAATTGATTCTAG+AGG | - | chr7.3:28433752-28433771 | None:intergenic | 25.0% |
| !! | ACCAATAGGTATTAGATTTT+GGG | - | chr7.3:28435780-28435799 | None:intergenic | 25.0% |
| !! | ATTCTCTTTTATCTTGAGAA+TGG | + | chr7.3:28435371-28435390 | MS.gene36648:intron | 25.0% |
| !! | TAAAGCCTATTTAGCTTAAA+AGG | + | chr7.3:28434672-28434691 | MS.gene36648:intron | 25.0% |
| !! | TAAGATATAGGCTTTTAAAC+AGG | + | chr7.3:28435028-28435047 | MS.gene36648:intron | 25.0% |
| !!! | AGGTTGGTTTTTGTTAAATT+TGG | + | chr7.3:28433255-28433274 | MS.gene36648:intron | 25.0% |
| !!! | CATTTTGATCCAAAATCAAA+GGG | + | chr7.3:28436113-28436132 | MS.gene36648:CDS | 25.0% |
| !!! | CTTTTTTGGTTTTGGTTTAA+TGG | + | chr7.3:28433356-28433375 | MS.gene36648:intron | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | + | chr7.3:28434636-28434655 | MS.gene36648:intron | 25.0% |
| !!! | GTAATAGAAAGTGTTTACAT+AGG | + | chr7.3:28435307-28435326 | MS.gene36648:intron | 25.0% |
| !!! | GTTAAAGTTTGAGTCTTTTT+TGG | + | chr7.3:28433342-28433361 | MS.gene36648:intron | 25.0% |
| !!! | TCATTTTGATCCAAAATCAA+AGG | + | chr7.3:28436112-28436131 | MS.gene36648:CDS | 25.0% |
| !!! | TGACATTAAGTTGATAAATC+GGG | + | chr7.3:28433872-28433891 | MS.gene36648:intron | 25.0% |
| !!! | TGATTTTGACTTAAATGAGT+TGG | + | chr7.3:28433569-28433588 | MS.gene36648:intron | 25.0% |
| !!! | TTAGATTCTAGTTAATTTGC+TGG | + | chr7.3:28434478-28434497 | MS.gene36648:intron | 25.0% |
| !!! | TTTGATTTTGCGTTTTTGTT+GGG | + | chr7.3:28433312-28433331 | MS.gene36648:intron | 25.0% |
| !!! | TTTTTGGTTTTGGTTTAATG+GGG | + | chr7.3:28433358-28433377 | MS.gene36648:intron | 25.0% |
| AAAACCAACCTGATGAATAT+TGG | - | chr7.3:28433246-28433265 | None:intergenic | 30.0% | |
| AATTGCTTCAAGTGTATGTT+TGG | + | chr7.3:28433500-28433519 | MS.gene36648:intron | 30.0% | |
| ACCACAATCTTCTTAACTTT+AGG | - | chr7.3:28434132-28434151 | None:intergenic | 30.0% | |
| ACCCAAAATCTAATACCTAT+TGG | + | chr7.3:28435776-28435795 | MS.gene36648:intron | 30.0% | |
| AGGGACTATATTGATACATA+TGG | - | chr7.3:28433408-28433427 | None:intergenic | 30.0% | |
| CAAAATATATTCACTAGGCA+AGG | - | chr7.3:28434358-28434377 | None:intergenic | 30.0% | |
| CAATATAGTCCCTCAAATTA+TGG | + | chr7.3:28433415-28433434 | MS.gene36648:intron | 30.0% | |
| CTCTATTTAAGAAAAAAGCC+TGG | - | chr7.3:28434635-28434654 | None:intergenic | 30.0% | |
| CTTAGAGTAAATACTCAAGT+TGG | - | chr7.3:28434051-28434070 | None:intergenic | 30.0% | |
| TGATAACATGTCTATAGAGA+GGG | + | chr7.3:28433935-28433954 | MS.gene36648:intron | 30.0% | |
| TGTGTAGTATAATGCATCTT+TGG | + | chr7.3:28435206-28435225 | MS.gene36648:intron | 30.0% | |
| ! | AGTTGGTACTCGAAATTAAA+GGG | - | chr7.3:28434034-28434053 | None:intergenic | 30.0% |
| ! | ATAATCAACACGAGGTTTTT+GGG | - | chr7.3:28434926-28434945 | None:intergenic | 30.0% |
| ! | TTGATAACATGTCTATAGAG+AGG | + | chr7.3:28433934-28433953 | MS.gene36648:intron | 30.0% |
| !! | AAGTTGGTACTCGAAATTAA+AGG | - | chr7.3:28434035-28434054 | None:intergenic | 30.0% |
| !! | ACAAAAATTATTGGCTCTCA+TGG | + | chr7.3:28436025-28436044 | MS.gene36648:CDS | 30.0% |
| !! | ATAGGCTTTAAAAAAAGCCT+AGG | - | chr7.3:28434662-28434681 | None:intergenic | 30.0% |
| !! | CAAAAATTATTGGCTCTCAT+GGG | + | chr7.3:28436026-28436045 | MS.gene36648:CDS | 30.0% |
| !! | GACATTAAGTTGATAAATCG+GGG | + | chr7.3:28433873-28433892 | MS.gene36648:intron | 30.0% |
| !! | GTTTGATTTTGCGTTTTTGT+TGG | + | chr7.3:28433311-28433330 | MS.gene36648:intron | 30.0% |
| !! | TATTGTTTTTCCCTCTTTTC+AGG | + | chr7.3:28434104-28434123 | MS.gene36648:intron | 30.0% |
| !!! | GTTTGAGTCTTTTTTGGTTT+TGG | + | chr7.3:28433348-28433367 | MS.gene36648:intron | 30.0% |
| !!! | TAGGTATTAGATTTTGGGTT+CGG | - | chr7.3:28435775-28435794 | None:intergenic | 30.0% |
| !!! | TCATTTTACACGCTTTGTTT+TGG | - | chr7.3:28435352-28435371 | None:intergenic | 30.0% |
| !!! | TTGGACTGTTTTTTTGTGAT+GGG | + | chr7.3:28433274-28433293 | MS.gene36648:intron | 30.0% |
| !!! | TTTGGACTGTTTTTTTGTGA+TGG | + | chr7.3:28433273-28433292 | MS.gene36648:intron | 30.0% |
| !!! | TTTTGACTTAAATGAGTTGG+AGG | + | chr7.3:28433572-28433591 | MS.gene36648:intron | 30.0% |
| AAAAGCCTCTTAAGCCTATT+AGG | + | chr7.3:28434714-28434733 | MS.gene36648:intron | 35.0% | |
| AACCTGATGAATATTGGTGT+AGG | - | chr7.3:28433240-28433259 | None:intergenic | 35.0% | |
| AAGAAGATTGTGGTAAACTG+TGG | + | chr7.3:28434138-28434157 | MS.gene36648:CDS | 35.0% | |
| ACAACGAAGAAGAAGAGAAT+TGG | - | chr7.3:28433073-28433092 | None:intergenic | 35.0% | |
| ACATCCTGTGTTAGAATATG+AGG | - | chr7.3:28435563-28435582 | None:intergenic | 35.0% | |
| ACTTGAAGCAATTCAACAGA+GGG | - | chr7.3:28433493-28433512 | None:intergenic | 35.0% | |
| ATTGTGGTAAACTGTGGTAT+TGG | + | chr7.3:28434144-28434163 | MS.gene36648:CDS | 35.0% | |
| CAACGAAGAAGAAGAGAATT+GGG | - | chr7.3:28433072-28433091 | None:intergenic | 35.0% | |
| CATAAAAAACCTGGATGTTG+CGG | + | chr7.3:28435666-28435685 | MS.gene36648:intron | 35.0% | |
| CCTCTCCATTTGTATTTGTA+GGG | + | chr7.3:28433842-28433861 | MS.gene36648:intron | 35.0% | |
| CTAGTCCCTACAAATACAAA+TGG | - | chr7.3:28433850-28433869 | None:intergenic | 35.0% | |
| GAGAATTCTTCCATAAGCAA+AGG | - | chr7.3:28433218-28433237 | None:intergenic | 35.0% | |
| GAGACATCACATAAAAAACC+TGG | + | chr7.3:28435657-28435676 | MS.gene36648:intron | 35.0% | |
| GCCTAAAGTTAAGAAGATTG+TGG | + | chr7.3:28434128-28434147 | MS.gene36648:CDS | 35.0% | |
| GGTTCTATGTTGACAAGAAT+TGG | + | chr7.3:28433521-28433540 | MS.gene36648:intron | 35.0% | |
| TACACCAATATTCATCAGGT+TGG | + | chr7.3:28433239-28433258 | MS.gene36648:intron | 35.0% | |
| TCCTCTCCATTTGTATTTGT+AGG | + | chr7.3:28433841-28433860 | MS.gene36648:intron | 35.0% | |
| TCTGTCGAATATCAACCAAT+AGG | - | chr7.3:28435794-28435813 | None:intergenic | 35.0% | |
| TGCACAAAATGCAAAAGGTT+TGG | + | chr7.3:28434173-28434192 | MS.gene36648:CDS | 35.0% | |
| TTAAGTAGAATCAATTCGGC+AGG | + | chr7.3:28433692-28433711 | MS.gene36648:intron | 35.0% | |
| TTAGCCTCATATTCTAACAC+AGG | + | chr7.3:28435556-28435575 | MS.gene36648:intron | 35.0% | |
| TTATCAACTTAGGACTTCCT+AGG | + | chr7.3:28435838-28435857 | MS.gene36648:CDS | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | + | chr7.3:28434642-28434661 | MS.gene36648:intron | 35.0% | |
| ! | ACTTCTTTTTGCGAACTACT+TGG | - | chr7.3:28436082-28436101 | None:intergenic | 35.0% |
| ! | CTTCTTTTTGCGAACTACTT+GGG | - | chr7.3:28436081-28436100 | None:intergenic | 35.0% |
| ! | GAGGTAAAGTGATTTGTGTT+CGG | + | chr7.3:28433591-28433610 | MS.gene36648:intron | 35.0% |
| ! | GATAATCAACACGAGGTTTT+TGG | - | chr7.3:28434927-28434946 | None:intergenic | 35.0% |
| ! | GGATGTTTAATATCGGTTAG+CGG | + | chr7.3:28435577-28435596 | MS.gene36648:intron | 35.0% |
| ! | TGAATATCAGCAGCTTTGAT+GGG | + | chr7.3:28435880-28435899 | MS.gene36648:CDS | 35.0% |
| ! | TGGATCACATGTAAGCTTTT+TGG | + | chr7.3:28435226-28435245 | MS.gene36648:intron | 35.0% |
| ! | TTGAATATCAGCAGCTTTGA+TGG | + | chr7.3:28435879-28435898 | MS.gene36648:CDS | 35.0% |
| ! | TTTGAGATTGCGGAAAATTG+AGG | + | chr7.3:28435619-28435638 | MS.gene36648:intron | 35.0% |
| !! | CTCTTTTGATAATCAACACG+AGG | - | chr7.3:28434934-28434953 | None:intergenic | 35.0% |
| !!! | ACATGTAAGCTTTTTGGAGT+TGG | + | chr7.3:28435232-28435251 | MS.gene36648:intron | 35.0% |
| !!! | CATGTAAGCTTTTTGGAGTT+GGG | + | chr7.3:28435233-28435252 | MS.gene36648:intron | 35.0% |
| AAATGTCTTGGAGTTAGGGA+TGG | - | chr7.3:28435168-28435187 | None:intergenic | 40.0% | |
| AACATGTCTATAGAGAGGGA+TGG | + | chr7.3:28433939-28433958 | MS.gene36648:intron | 40.0% | |
| AACTTTAGGCACCTGAAAAG+AGG | - | chr7.3:28434118-28434137 | None:intergenic | 40.0% | |
| AATGTCTTGGAGTTAGGGAT+GGG | - | chr7.3:28435167-28435186 | None:intergenic | 40.0% | |
| ACTTTAGGCACCTGAAAAGA+GGG | - | chr7.3:28434117-28434136 | None:intergenic | 40.0% | |
| AGCCAAATGTCTTGGAGTTA+GGG | - | chr7.3:28435172-28435191 | None:intergenic | 40.0% | |
| AGCTCGAAATTGAGAGAGAA+AGG | - | chr7.3:28433042-28433061 | None:intergenic | 40.0% | |
| ATCCCTAACTCCAAGACATT+TGG | + | chr7.3:28435167-28435186 | MS.gene36648:intron | 40.0% | |
| ATGCAGATATCCATTCCTCT+AGG | - | chr7.3:28435975-28435994 | None:intergenic | 40.0% | |
| CAAACAGTAGCCAAATGTCT+TGG | - | chr7.3:28435180-28435199 | None:intergenic | 40.0% | |
| CACTTGAAGCAATTCAACAG+AGG | - | chr7.3:28433494-28433513 | None:intergenic | 40.0% | |
| CCCTACAAATACAAATGGAG+AGG | - | chr7.3:28433845-28433864 | None:intergenic | 40.0% | |
| CCTTGAAAATCTCTTGTCCT+AGG | - | chr7.3:28435858-28435877 | None:intergenic | 40.0% | |
| CGGAAAATTGAGGTCAAACA+CGG | + | chr7.3:28435629-28435648 | MS.gene36648:intron | 40.0% | |
| CTAAAAAGTAGGCCTATGAC+AGG | + | chr7.3:28435092-28435111 | MS.gene36648:intron | 40.0% | |
| CTATACCAGATTTCAGCTCT+GGG | - | chr7.3:28435947-28435966 | None:intergenic | 40.0% | |
| CTCCTACACCAATATTCATC+AGG | + | chr7.3:28433235-28433254 | MS.gene36648:intron | 40.0% | |
| GAAGAAGAAGAGAATTGGGT+TGG | - | chr7.3:28433068-28433087 | None:intergenic | 40.0% | |
| GAAGCTGCACAAAATGCAAA+AGG | + | chr7.3:28434168-28434187 | MS.gene36648:CDS | 40.0% | |
| GATCCAAAATCAAAGGGTAG+AGG | + | chr7.3:28436119-28436138 | MS.gene36648:CDS | 40.0% | |
| GCTGGTATAGTTAGATGCAT+TGG | + | chr7.3:28434496-28434515 | MS.gene36648:intron | 40.0% | |
| GGGAATGGGAATTACAACAT+TGG | + | chr7.3:28435900-28435919 | MS.gene36648:CDS | 40.0% | |
| TAGCCAAATGTCTTGGAGTT+AGG | - | chr7.3:28435173-28435192 | None:intergenic | 40.0% | |
| TATAGGTACACCTAGAGGAA+TGG | + | chr7.3:28435962-28435981 | MS.gene36648:CDS | 40.0% | |
| TCTTCTTCGTTGTTCTCTCA+TGG | + | chr7.3:28433080-28433099 | MS.gene36648:CDS | 40.0% | |
| TTTAAGAAAAAAGCCTGGCC+TGG | - | chr7.3:28434630-28434649 | None:intergenic | 40.0% | |
| ! | AGAAGAGTGTAGAAGAGAAG+GGG | - | chr7.3:28433012-28433031 | None:intergenic | 40.0% |
| ! | CAGAAGAGTGTAGAAGAGAA+GGG | - | chr7.3:28433013-28433032 | None:intergenic | 40.0% |
| ! | CCTAGGACAAGAGATTTTCA+AGG | + | chr7.3:28435855-28435874 | MS.gene36648:CDS | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | + | chr7.3:28434677-28434696 | MS.gene36648:intron | 40.0% |
| ! | TCCTTCTTGATCAGTTCTAG+CGG | - | chr7.3:28436006-28436025 | None:intergenic | 40.0% |
| ! | TGCGTTTTTGTTGGGTTTGT+GGG | + | chr7.3:28433320-28433339 | MS.gene36648:intron | 40.0% |
| ! | TTGCGTTTTTGTTGGGTTTG+TGG | + | chr7.3:28433319-28433338 | MS.gene36648:intron | 40.0% |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | - | chr7.3:28434680-28434699 | None:intergenic | 40.0% |
| !! | GAAGTCCTAAGTTGATAACG+CGG | - | chr7.3:28435836-28435855 | None:intergenic | 40.0% |
| !! | TCTCCTCTACCCTTTGATTT+TGG | - | chr7.3:28436125-28436144 | None:intergenic | 40.0% |
| !! | TTGATCTAGCACTGATCACT+GGG | + | chr7.3:28434208-28434227 | MS.gene36648:CDS | 40.0% |
| !!! | ACACGCTTTGTTTTGGTATG+TGG | - | chr7.3:28435345-28435364 | None:intergenic | 40.0% |
| !!! | CACGCTTTGTTTTGGTATGT+GGG | - | chr7.3:28435344-28435363 | None:intergenic | 40.0% |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | - | chr7.3:28435094-28435113 | None:intergenic | 40.0% |
| AAAATATGGTCTGCAGACCG+TGG | - | chr7.3:28435698-28435717 | None:intergenic | 45.0% | |
| AACTTCAACTCCCTCTCTGA+AGG | - | chr7.3:28436057-28436076 | None:intergenic | 45.0% | |
| ACCGCTAGAACTGATCAAGA+AGG | + | chr7.3:28436002-28436021 | MS.gene36648:CDS | 45.0% | |
| ACTTCAACTCCCTCTCTGAA+GGG | - | chr7.3:28436056-28436075 | None:intergenic | 45.0% | |
| AGACTACTCCAAGTAGGGAT+GGG | + | chr7.3:28434556-28434575 | MS.gene36648:intron | 45.0% | |
| ATTGAGGTCAAACACGGTTG+TGG | + | chr7.3:28435635-28435654 | MS.gene36648:intron | 45.0% | |
| CAAGGAGACTACTCCAAGTA+GGG | + | chr7.3:28434551-28434570 | MS.gene36648:intron | 45.0% | |
| CCAGAGCTGAAATCTGGTAT+AGG | + | chr7.3:28435945-28435964 | MS.gene36648:CDS | 45.0% | |
| CCTATACCAGATTTCAGCTC+TGG | - | chr7.3:28435948-28435967 | None:intergenic | 45.0% | |
| CTAGACCGCGTTATCAACTT+AGG | + | chr7.3:28435828-28435847 | MS.gene36648:CDS | 45.0% | |
| CTCTCATGGAAACAACAGAC+TGG | + | chr7.3:28433094-28433113 | MS.gene36648:CDS | 45.0% | |
| CTTAAATAGGCCGGCCTAAT+AGG | - | chr7.3:28434731-28434750 | None:intergenic | 45.0% | |
| TATCAGGCTTTCAGAAGGTC+AGG | + | chr7.3:28435062-28435081 | MS.gene36648:intron | 45.0% | |
| TCAAGGAGACTACTCCAAGT+AGG | + | chr7.3:28434550-28434569 | MS.gene36648:intron | 45.0% | |
| TCTGGTATAGGTACACCTAG+AGG | + | chr7.3:28435957-28435976 | MS.gene36648:CDS | 45.0% | |
| TCTGTGAAAGCTGATGCTTC+TGG | + | chr7.3:28433119-28433138 | MS.gene36648:CDS | 45.0% | |
| TTGACCTTCCCTGATCTTGA+AGG | - | chr7.3:28434274-28434293 | None:intergenic | 45.0% | |
| TTGGAGTTAGGGATGGGAAT+AGG | - | chr7.3:28435161-28435180 | None:intergenic | 45.0% | |
| ! | AGGCTTTTAAACAGGCTAGC+AGG | + | chr7.3:28435036-28435055 | MS.gene36648:intron | 45.0% |
| ! | ATCAGCAGCTTTGATGGGAA+TGG | + | chr7.3:28435885-28435904 | MS.gene36648:CDS | 45.0% |
| ! | ATGAACTCTGATAAGCGCTG+AGG | + | chr7.3:28434523-28434542 | MS.gene36648:intron | 45.0% |
| ! | GACCTTCTGAAAGCCTGATA+CGG | - | chr7.3:28435062-28435081 | None:intergenic | 45.0% |
| ! | GCAGAAGAGTGTAGAAGAGA+AGG | - | chr7.3:28433014-28433033 | None:intergenic | 45.0% |
| ! | GGAGAAATCTGAAGCAGAGA+AGG | + | chr7.3:28433154-28433173 | MS.gene36648:CDS | 45.0% |
| ! | TCAGCAGCTTTGATGGGAAT+GGG | + | chr7.3:28435886-28435905 | MS.gene36648:CDS | 45.0% |
| ! | TTAATATCGGTTAGCGGCTG+TGG | + | chr7.3:28435583-28435602 | MS.gene36648:intron | 45.0% |
| !! | CTAAGTTGATAACGCGGTCT+AGG | - | chr7.3:28435830-28435849 | None:intergenic | 45.0% |
| !! | CTTCGCGATCTTTGAGATTG+CGG | + | chr7.3:28435609-28435628 | MS.gene36648:intron | 45.0% |
| !! | CTTGATCTAGCACTGATCAC+TGG | + | chr7.3:28434207-28434226 | MS.gene36648:CDS | 45.0% |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | - | chr7.3:28434710-28434729 | None:intergenic | 45.0% |
| !! | TGATGCTTCTGGTGCTGTAT+TGG | + | chr7.3:28433130-28433149 | MS.gene36648:CDS | 45.0% |
| ACCTTCCCTGATCTTGAAGG+TGG | - | chr7.3:28434271-28434290 | None:intergenic | 50.0% | |
| AGCTTAAAAGGCCAGGCCAT+AGG | + | chr7.3:28434684-28434703 | MS.gene36648:intron | 50.0% | |
| AGTGTCACAGCAATCCCAAG+TGG | - | chr7.3:28434297-28434316 | None:intergenic | 50.0% | |
| ATCAGGGAAGGTCAACCACT+TGG | + | chr7.3:28434279-28434298 | MS.gene36648:CDS | 50.0% | |
| ATGGGTATGCCCTTCAGAGA+GGG | + | chr7.3:28436044-28436063 | MS.gene36648:CDS | 50.0% | |
| CAGGCTCAGGCCTAAAAAGT+AGG | + | chr7.3:28435081-28435100 | MS.gene36648:intron | 50.0% | |
| CCTGATCTTGAAGGTGGCAA+CGG | - | chr7.3:28434265-28434284 | None:intergenic | 50.0% | |
| CGTTGCCACCTTCAAGATCA+GGG | + | chr7.3:28434263-28434282 | MS.gene36648:CDS | 50.0% | |
| CTCCAAGTAGGGATGGGAAT+AGG | + | chr7.3:28434562-28434581 | MS.gene36648:intron | 50.0% | |
| GAGACTACTCCAAGTAGGGA+TGG | + | chr7.3:28434555-28434574 | MS.gene36648:intron | 50.0% | |
| GCAGAGACCTGTTAAGACTC+GGG | + | chr7.3:28434230-28434249 | MS.gene36648:CDS | 50.0% | |
| GCCTCTTAAGCCTATTAGGC+CGG | + | chr7.3:28434718-28434737 | MS.gene36648:intron | 50.0% | |
| GGCAGAGACCTGTTAAGACT+CGG | + | chr7.3:28434229-28434248 | MS.gene36648:CDS | 50.0% | |
| GTGTTCCCAGAGCTGAAATC+TGG | + | chr7.3:28435939-28435958 | MS.gene36648:CDS | 50.0% | |
| GTTAGGGATGGGAATAGGCT+AGG | - | chr7.3:28435156-28435175 | None:intergenic | 50.0% | |
| TCAGGGAAGGTCAACCACTT+GGG | + | chr7.3:28434280-28434299 | MS.gene36648:CDS | 50.0% | |
| !! | GAGGCTTTTTGAGAGGCCTA+TGG | - | chr7.3:28434703-28434722 | None:intergenic | 50.0% |
| !! | TCAGCTCTGGGAACACAGTT+TGG | - | chr7.3:28435935-28435954 | None:intergenic | 50.0% |
| !! | TGCTTCTGGTGCTGTATTGG+TGG | + | chr7.3:28433133-28433152 | MS.gene36648:CDS | 50.0% |
| !! | TTTTTGAGAGGCCTATGGCC+TGG | - | chr7.3:28434698-28434717 | None:intergenic | 50.0% |
| AGGCCTTGCAAAGCCTAGCT+CGG | + | chr7.3:28435130-28435149 | MS.gene36648:intron | 55.0% | |
| CATGGGTATGCCCTTCAGAG+AGG | + | chr7.3:28436043-28436062 | MS.gene36648:CDS | 55.0% | |
| CCGTTGCCACCTTCAAGATC+AGG | + | chr7.3:28434262-28434281 | MS.gene36648:CDS | 55.0% | |
| GCCACCTTCAAGATCAGGGA+AGG | + | chr7.3:28434267-28434286 | MS.gene36648:CDS | 55.0% | |
| GCCGGCCTAATAGGCTTAAG+AGG | - | chr7.3:28434722-28434741 | None:intergenic | 55.0% | |
| GCTTTCAGAAGGTCAGGCTC+AGG | + | chr7.3:28435068-28435087 | MS.gene36648:intron | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | + | chr7.3:28435057-28435076 | MS.gene36648:intron | 55.0% | |
| GGCCTATTCCCATCCCTACT+TGG | - | chr7.3:28434567-28434586 | None:intergenic | 55.0% | |
| GGGATTGCTGTGACACTCAG+AGG | + | chr7.3:28434300-28434319 | MS.gene36648:CDS | 55.0% | |
| TTCCTCGCCCGAGTCTTAAC+AGG | - | chr7.3:28434240-28434259 | None:intergenic | 55.0% | |
| !! | ATAAGCGCTGAGGCGCTTCA+AGG | + | chr7.3:28434533-28434552 | MS.gene36648:intron | 55.0% |
| AATAGGCCAGACCGGCCTAC+AGG | + | chr7.3:28434579-28434598 | MS.gene36648:intron | 60.0% | |
| ACAGGCTAGCAGGCCGTATC+AGG | + | chr7.3:28435046-28435065 | MS.gene36648:intron | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | - | chr7.3:28435136-28435155 | None:intergenic | 60.0% | |
| ATAGGCCAGACCGGCCTACA+GGG | + | chr7.3:28434580-28434599 | MS.gene36648:intron | 60.0% | |
| GACCTGTTAAGACTCGGGCG+AGG | + | chr7.3:28434235-28434254 | MS.gene36648:CDS | 60.0% | |
| GGAATAGGCTAGGCCGAGCT+AGG | - | chr7.3:28435146-28435165 | None:intergenic | 60.0% | |
| GGCTTTGCAAGGCCTAAGCC+TGG | - | chr7.3:28435125-28435144 | None:intergenic | 60.0% | |
| GGGATGGGAATAGGCCAGAC+CGG | + | chr7.3:28434571-28434590 | MS.gene36648:intron | 60.0% | |
| CAAGGCCTAAGCCTGGCCTG+CGG | - | chr7.3:28435118-28435137 | None:intergenic | 65.0% | |
| CCTACGGCCTAGCCTACGAC+AGG | + | chr7.3:28434604-28434623 | MS.gene36648:intron | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | - | chr7.3:28434607-28434626 | None:intergenic | 65.0% | |
| GGATGTTGCGGCCACAGCCA+CGG | + | chr7.3:28435678-28435697 | MS.gene36648:intron | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | + | chr7.3:28435099-28435118 | MS.gene36648:intron | 65.0% | |
| TAGGCCAGACCGGCCTACAG+GGG | + | chr7.3:28434581-28434600 | MS.gene36648:intron | 65.0% | |
| TGGCTGTGGCCGCAACATCC+AGG | - | chr7.3:28435678-28435697 | None:intergenic | 65.0% | |
| TGGTCTGCAGACCGTGGCTG+TGG | - | chr7.3:28435692-28435711 | None:intergenic | 65.0% | |
| ACAGGCCGCAGGCCAGGCTT+AGG | + | chr7.3:28435110-28435129 | MS.gene36648:intron | 70.0% | |
| AGCCTACGACAGGCCAGGCC+AGG | + | chr7.3:28434614-28434633 | MS.gene36648:intron | 70.0% | |
| AGCCTGGCCTGGCCTGTCGT+AGG | - | chr7.3:28434619-28434638 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr7.3:28435104-28435123 | MS.gene36648:intron | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr7.3:28435107-28435126 | None:intergenic | 70.0% | |
| GACCGGCCTACAGGGGCCTA+CGG | + | chr7.3:28434588-28434607 | MS.gene36648:intron | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | - | chr7.3:28434597-28434616 | None:intergenic | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | + | chr7.3:28434609-28434628 | MS.gene36648:intron | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | - | chr7.3:28434614-28434633 | None:intergenic | 70.0% | |
| TAGGCCCCTGTAGGCCGGTC+TGG | - | chr7.3:28434588-28434607 | None:intergenic | 70.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | - | chr7.3:28434593-28434612 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 28432999 | 28436160 | 28432999 | ID=MS.gene36648 |
| chr7.3 | mRNA | 28432999 | 28436160 | 28432999 | ID=MS.gene36648.t1;Parent=MS.gene36648 |
| chr7.3 | exon | 28432999 | 28433175 | 28432999 | ID=MS.gene36648.t1.exon1;Parent=MS.gene36648.t1 |
| chr7.3 | CDS | 28432999 | 28433175 | 28432999 | ID=cds.MS.gene36648.t1;Parent=MS.gene36648.t1 |
| chr7.3 | exon | 28434126 | 28434326 | 28434126 | ID=MS.gene36648.t1.exon2;Parent=MS.gene36648.t1 |
| chr7.3 | CDS | 28434126 | 28434326 | 28434126 | ID=cds.MS.gene36648.t1;Parent=MS.gene36648.t1 |
| chr7.3 | exon | 28435813 | 28436160 | 28435813 | ID=MS.gene36648.t1.exon3;Parent=MS.gene36648.t1 |
| chr7.3 | CDS | 28435813 | 28436160 | 28435813 | ID=cds.MS.gene36648.t1;Parent=MS.gene36648.t1 |
| Gene Sequence |
| Protein sequence |
