Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66262.t1 | XP_013459996.1 | 95.2 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 1.30E-90 | 342.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66262.t1 | Q9LK61 | 64.9 | 191 | 64 | 1 | 1 | 188 | 1 | 191 | 1.8e-56 | 220.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66262.t1 | I3SWS9 | 95.2 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 9.4e-91 | 342.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene66262 | 0.870444 | 1.45E-66 | -1.69E-46 |
MS.gene049217 | MS.gene66262 | 0.855369 | 6.61E-62 | -1.69E-46 |
MS.gene049222 | MS.gene66262 | 0.833166 | 6.23E-56 | -1.69E-46 |
MS.gene049284 | MS.gene66262 | 0.812344 | 4.44E-51 | -1.69E-46 |
MS.gene049285 | MS.gene66262 | 0.835927 | 1.26E-56 | -1.69E-46 |
MS.gene049320 | MS.gene66262 | 0.815026 | 1.14E-51 | -1.69E-46 |
MS.gene049351 | MS.gene66262 | 0.871731 | 5.46E-67 | -1.69E-46 |
MS.gene049427 | MS.gene66262 | 0.894867 | 1.65E-75 | -1.69E-46 |
MS.gene049491 | MS.gene66262 | 0.846339 | 2.31E-59 | -1.69E-46 |
MS.gene049609 | MS.gene66262 | 0.837417 | 5.26E-57 | -1.69E-46 |
MS.gene049614 | MS.gene66262 | 0.861729 | 8.36E-64 | -1.69E-46 |
MS.gene049615 | MS.gene66262 | 0.812516 | 4.08E-51 | -1.69E-46 |
MS.gene049661 | MS.gene66262 | 0.850594 | 1.53E-60 | -1.69E-46 |
MS.gene049662 | MS.gene66262 | 0.839695 | 1.36E-57 | -1.69E-46 |
MS.gene049760 | MS.gene66262 | 0.845602 | 3.67E-59 | -1.69E-46 |
MS.gene049805 | MS.gene66262 | 0.882907 | 7.02E-71 | -1.69E-46 |
MS.gene050076 | MS.gene66262 | 0.885082 | 1.10E-71 | -1.69E-46 |
MS.gene050099 | MS.gene66262 | 0.819831 | 9.45E-53 | -1.69E-46 |
MS.gene050163 | MS.gene66262 | 0.852455 | 4.57E-61 | -1.69E-46 |
MS.gene050165 | MS.gene66262 | 0.821782 | 3.36E-53 | -1.69E-46 |
MS.gene050301 | MS.gene66262 | 0.850604 | 1.52E-60 | -1.69E-46 |
MS.gene050333 | MS.gene66262 | 0.842693 | 2.21E-58 | -1.69E-46 |
MS.gene050397 | MS.gene66262 | 0.833102 | 6.47E-56 | -1.69E-46 |
MS.gene050432 | MS.gene66262 | 0.858792 | 6.46E-63 | -1.69E-46 |
MS.gene050464 | MS.gene66262 | 0.842045 | 3.29E-58 | -1.69E-46 |
MS.gene050475 | MS.gene66262 | -0.827527 | 1.49E-54 | -1.69E-46 |
MS.gene050518 | MS.gene66262 | 0.800566 | 1.36E-48 | -1.69E-46 |
MS.gene050529 | MS.gene66262 | 0.860364 | 2.17E-63 | -1.69E-46 |
MS.gene05053 | MS.gene66262 | 0.809612 | 1.74E-50 | -1.69E-46 |
MS.gene050541 | MS.gene66262 | -0.82672 | 2.32E-54 | -1.69E-46 |
MS.gene050593 | MS.gene66262 | 0.859043 | 5.43E-63 | -1.69E-46 |
MS.gene050670 | MS.gene66262 | 0.844267 | 8.40E-59 | -1.69E-46 |
MS.gene050699 | MS.gene66262 | 0.805623 | 1.22E-49 | -1.69E-46 |
MS.gene050747 | MS.gene66262 | 0.834467 | 2.95E-56 | -1.69E-46 |
MS.gene050767 | MS.gene66262 | 0.909907 | 3.39E-82 | -1.69E-46 |
MS.gene050770 | MS.gene66262 | 0.912712 | 1.42E-83 | -1.69E-46 |
MS.gene050772 | MS.gene66262 | 0.853899 | 1.76E-61 | -1.69E-46 |
MS.gene050781 | MS.gene66262 | 0.814448 | 1.53E-51 | -1.69E-46 |
MS.gene050783 | MS.gene66262 | 0.843602 | 1.27E-58 | -1.69E-46 |
MS.gene050812 | MS.gene66262 | 0.845802 | 3.24E-59 | -1.69E-46 |
MS.gene050950 | MS.gene66262 | 0.825332 | 4.97E-54 | -1.69E-46 |
MS.gene05100 | MS.gene66262 | 0.853417 | 2.42E-61 | -1.69E-46 |
MS.gene05101 | MS.gene66262 | 0.89708 | 1.99E-76 | -1.69E-46 |
MS.gene05105 | MS.gene66262 | 0.859612 | 3.67E-63 | -1.69E-46 |
MS.gene051228 | MS.gene66262 | 0.838164 | 3.38E-57 | -1.69E-46 |
MS.gene051387 | MS.gene66262 | 0.877819 | 4.63E-69 | -1.69E-46 |
MS.gene051471 | MS.gene66262 | 0.863772 | 1.96E-64 | -1.69E-46 |
MS.gene051666 | MS.gene66262 | 0.878972 | 1.82E-69 | -1.69E-46 |
MS.gene051692 | MS.gene66262 | 0.820825 | 5.59E-53 | -1.69E-46 |
MS.gene051694 | MS.gene66262 | 0.868811 | 4.95E-66 | -1.69E-46 |
MS.gene051810 | MS.gene66262 | 0.800767 | 1.24E-48 | -1.69E-46 |
MS.gene051858 | MS.gene66262 | 0.856797 | 2.52E-62 | -1.69E-46 |
MS.gene051877 | MS.gene66262 | 0.864548 | 1.12E-64 | -1.69E-46 |
MS.gene052078 | MS.gene66262 | 0.878259 | 3.25E-69 | -1.69E-46 |
MS.gene052188 | MS.gene66262 | 0.828103 | 1.08E-54 | -1.69E-46 |
MS.gene052271 | MS.gene66262 | 0.875187 | 3.75E-68 | -1.69E-46 |
MS.gene052290 | MS.gene66262 | 0.852441 | 4.61E-61 | -1.69E-46 |
MS.gene052310 | MS.gene66262 | 0.899572 | 1.73E-77 | -1.69E-46 |
MS.gene052322 | MS.gene66262 | 0.828841 | 7.18E-55 | -1.69E-46 |
MS.gene052326 | MS.gene66262 | 0.882682 | 8.49E-71 | -1.69E-46 |
MS.gene052379 | MS.gene66262 | 0.891795 | 2.87E-74 | -1.69E-46 |
MS.gene052421 | MS.gene66262 | 0.861265 | 1.16E-63 | -1.69E-46 |
MS.gene052481 | MS.gene66262 | 0.830087 | 3.58E-55 | -1.69E-46 |
MS.gene052484 | MS.gene66262 | 0.835563 | 1.56E-56 | -1.69E-46 |
MS.gene052485 | MS.gene66262 | 0.829364 | 5.36E-55 | -1.69E-46 |
MS.gene052615 | MS.gene66262 | 0.851489 | 8.58E-61 | -1.69E-46 |
MS.gene052916 | MS.gene66262 | 0.826774 | 2.26E-54 | -1.69E-46 |
MS.gene053009 | MS.gene66262 | 0.844366 | 7.90E-59 | -1.69E-46 |
MS.gene053103 | MS.gene66262 | 0.866791 | 2.20E-65 | -1.69E-46 |
MS.gene053104 | MS.gene66262 | 0.863461 | 2.45E-64 | -1.69E-46 |
MS.gene053107 | MS.gene66262 | 0.841254 | 5.31E-58 | -1.69E-46 |
MS.gene053207 | MS.gene66262 | 0.828247 | 1.00E-54 | -1.69E-46 |
MS.gene053209 | MS.gene66262 | 0.80949 | 1.84E-50 | -1.69E-46 |
MS.gene053213 | MS.gene66262 | 0.857948 | 1.15E-62 | -1.69E-46 |
MS.gene053286 | MS.gene66262 | 0.84463 | 6.71E-59 | -1.69E-46 |
MS.gene053322 | MS.gene66262 | 0.93418 | 6.02E-96 | -1.69E-46 |
MS.gene053384 | MS.gene66262 | 0.812496 | 4.12E-51 | -1.69E-46 |
MS.gene053574 | MS.gene66262 | 0.811828 | 5.76E-51 | -1.69E-46 |
MS.gene053579 | MS.gene66262 | 0.839839 | 1.25E-57 | -1.69E-46 |
MS.gene053632 | MS.gene66262 | 0.844383 | 7.82E-59 | -1.69E-46 |
MS.gene053813 | MS.gene66262 | 0.838899 | 2.19E-57 | -1.69E-46 |
MS.gene053836 | MS.gene66262 | 0.800054 | 1.73E-48 | -1.69E-46 |
MS.gene053915 | MS.gene66262 | 0.834577 | 2.77E-56 | -1.69E-46 |
MS.gene053916 | MS.gene66262 | 0.805586 | 1.24E-49 | -1.69E-46 |
MS.gene054123 | MS.gene66262 | 0.845269 | 4.51E-59 | -1.69E-46 |
MS.gene054376 | MS.gene66262 | 0.908575 | 1.47E-81 | -1.69E-46 |
MS.gene05455 | MS.gene66262 | 0.845733 | 3.38E-59 | -1.69E-46 |
MS.gene054600 | MS.gene66262 | 0.803079 | 4.14E-49 | -1.69E-46 |
MS.gene054642 | MS.gene66262 | 0.853369 | 2.50E-61 | -1.69E-46 |
MS.gene054802 | MS.gene66262 | 0.929448 | 6.85E-93 | -1.69E-46 |
MS.gene054803 | MS.gene66262 | 0.926163 | 6.84E-91 | -1.69E-46 |
MS.gene054804 | MS.gene66262 | 0.929237 | 9.26E-93 | -1.69E-46 |
MS.gene054955 | MS.gene66262 | 0.863438 | 2.49E-64 | -1.69E-46 |
MS.gene05505 | MS.gene66262 | 0.867937 | 9.46E-66 | -1.69E-46 |
MS.gene055116 | MS.gene66262 | 0.828996 | 6.59E-55 | -1.69E-46 |
MS.gene055206 | MS.gene66262 | 0.832144 | 1.12E-55 | -1.69E-46 |
MS.gene055254 | MS.gene66262 | 0.849634 | 2.85E-60 | -1.69E-46 |
MS.gene055277 | MS.gene66262 | 0.883516 | 4.20E-71 | -1.69E-46 |
MS.gene055289 | MS.gene66262 | 0.800765 | 1.24E-48 | -1.69E-46 |
MS.gene055362 | MS.gene66262 | 0.805783 | 1.13E-49 | -1.69E-46 |
MS.gene055390 | MS.gene66262 | 0.856072 | 4.12E-62 | -1.69E-46 |
MS.gene055397 | MS.gene66262 | 0.90279 | 6.76E-79 | -1.69E-46 |
MS.gene055412 | MS.gene66262 | 0.856943 | 2.28E-62 | -1.69E-46 |
MS.gene055422 | MS.gene66262 | 0.853103 | 2.98E-61 | -1.69E-46 |
MS.gene055428 | MS.gene66262 | 0.8355 | 1.62E-56 | -1.69E-46 |
MS.gene055499 | MS.gene66262 | 0.90223 | 1.20E-78 | -1.69E-46 |
MS.gene055502 | MS.gene66262 | 0.828146 | 1.06E-54 | -1.69E-46 |
MS.gene055533 | MS.gene66262 | 0.832584 | 8.69E-56 | -1.69E-46 |
MS.gene055636 | MS.gene66262 | 0.827288 | 1.70E-54 | -1.69E-46 |
MS.gene055638 | MS.gene66262 | 0.819268 | 1.27E-52 | -1.69E-46 |
MS.gene055647 | MS.gene66262 | 0.884437 | 1.92E-71 | -1.69E-46 |
MS.gene055722 | MS.gene66262 | 0.840664 | 7.59E-58 | -1.69E-46 |
MS.gene055896 | MS.gene66262 | 0.874596 | 5.97E-68 | -1.69E-46 |
MS.gene05592 | MS.gene66262 | 0.870751 | 1.15E-66 | -1.69E-46 |
MS.gene055930 | MS.gene66262 | 0.810981 | 8.80E-51 | -1.69E-46 |
MS.gene055941 | MS.gene66262 | 0.835919 | 1.27E-56 | -1.69E-46 |
MS.gene05602 | MS.gene66262 | 0.804425 | 2.17E-49 | -1.69E-46 |
MS.gene056083 | MS.gene66262 | 0.853829 | 1.85E-61 | -1.69E-46 |
MS.gene056191 | MS.gene66262 | 0.830222 | 3.32E-55 | -1.69E-46 |
MS.gene056374 | MS.gene66262 | 0.842286 | 2.84E-58 | -1.69E-46 |
MS.gene056407 | MS.gene66262 | 0.86868 | 5.45E-66 | -1.69E-46 |
MS.gene056410 | MS.gene66262 | 0.851669 | 7.64E-61 | -1.69E-46 |
MS.gene056452 | MS.gene66262 | 0.846431 | 2.18E-59 | -1.69E-46 |
MS.gene056511 | MS.gene66262 | 0.823324 | 1.47E-53 | -1.69E-46 |
MS.gene056549 | MS.gene66262 | 0.827317 | 1.67E-54 | -1.69E-46 |
MS.gene056609 | MS.gene66262 | 0.855191 | 7.44E-62 | -1.69E-46 |
MS.gene056612 | MS.gene66262 | 0.836961 | 6.88E-57 | -1.69E-46 |
MS.gene056657 | MS.gene66262 | 0.833258 | 5.91E-56 | -1.69E-46 |
MS.gene056692 | MS.gene66262 | 0.800159 | 1.64E-48 | -1.69E-46 |
MS.gene056796 | MS.gene66262 | 0.839006 | 2.05E-57 | -1.69E-46 |
MS.gene056897 | MS.gene66262 | 0.802094 | 6.60E-49 | -1.69E-46 |
MS.gene056942 | MS.gene66262 | 0.823235 | 1.55E-53 | -1.69E-46 |
MS.gene057011 | MS.gene66262 | 0.914281 | 2.30E-84 | -1.69E-46 |
MS.gene05702 | MS.gene66262 | 0.817333 | 3.48E-52 | -1.69E-46 |
MS.gene057123 | MS.gene66262 | 0.890062 | 1.38E-73 | -1.69E-46 |
MS.gene057129 | MS.gene66262 | 0.907519 | 4.64E-81 | -1.69E-46 |
MS.gene057146 | MS.gene66262 | 0.922508 | 8.97E-89 | -1.69E-46 |
MS.gene057285 | MS.gene66262 | 0.808233 | 3.42E-50 | -1.69E-46 |
MS.gene057295 | MS.gene66262 | 0.849201 | 3.76E-60 | -1.69E-46 |
MS.gene057331 | MS.gene66262 | 0.833792 | 4.35E-56 | -1.69E-46 |
MS.gene05735 | MS.gene66262 | 0.81455 | 1.46E-51 | -1.69E-46 |
MS.gene057416 | MS.gene66262 | 0.895607 | 8.16E-76 | -1.69E-46 |
MS.gene057478 | MS.gene66262 | -0.81869 | 1.72E-52 | -1.69E-46 |
MS.gene057749 | MS.gene66262 | 0.805884 | 1.08E-49 | -1.69E-46 |
MS.gene057823 | MS.gene66262 | 0.815465 | 9.12E-52 | -1.69E-46 |
MS.gene057926 | MS.gene66262 | 0.800787 | 1.22E-48 | -1.69E-46 |
MS.gene058002 | MS.gene66262 | 0.814309 | 1.64E-51 | -1.69E-46 |
MS.gene058006 | MS.gene66262 | 0.824531 | 7.67E-54 | -1.69E-46 |
MS.gene058019 | MS.gene66262 | 0.897175 | 1.81E-76 | -1.69E-46 |
MS.gene058082 | MS.gene66262 | 0.802665 | 5.04E-49 | -1.69E-46 |
MS.gene05811 | MS.gene66262 | 0.819388 | 1.19E-52 | -1.69E-46 |
MS.gene058130 | MS.gene66262 | 0.800211 | 1.60E-48 | -1.69E-46 |
MS.gene058233 | MS.gene66262 | 0.841632 | 4.22E-58 | -1.69E-46 |
MS.gene058293 | MS.gene66262 | 0.904261 | 1.48E-79 | -1.69E-46 |
MS.gene058323 | MS.gene66262 | 0.860654 | 1.78E-63 | -1.69E-46 |
MS.gene058419 | MS.gene66262 | 0.843928 | 1.04E-58 | -1.69E-46 |
MS.gene058544 | MS.gene66262 | 0.813518 | 2.46E-51 | -1.69E-46 |
MS.gene058660 | MS.gene66262 | 0.938579 | 5.33E-99 | -1.69E-46 |
MS.gene058787 | MS.gene66262 | 0.807032 | 6.16E-50 | -1.69E-46 |
MS.gene05883 | MS.gene66262 | 0.843072 | 1.75E-58 | -1.69E-46 |
MS.gene058903 | MS.gene66262 | 0.821555 | 3.79E-53 | -1.69E-46 |
MS.gene058928 | MS.gene66262 | 0.831193 | 1.92E-55 | -1.69E-46 |
MS.gene058993 | MS.gene66262 | 0.838253 | 3.21E-57 | -1.69E-46 |
MS.gene059029 | MS.gene66262 | 0.846857 | 1.67E-59 | -1.69E-46 |
MS.gene05907 | MS.gene66262 | 0.852967 | 3.26E-61 | -1.69E-46 |
MS.gene059141 | MS.gene66262 | 0.809589 | 1.76E-50 | -1.69E-46 |
MS.gene059326 | MS.gene66262 | 0.871562 | 6.22E-67 | -1.69E-46 |
MS.gene05934 | MS.gene66262 | 0.867199 | 1.63E-65 | -1.69E-46 |
MS.gene059536 | MS.gene66262 | 0.933501 | 1.70E-95 | -1.69E-46 |
MS.gene059597 | MS.gene66262 | 0.863629 | 2.17E-64 | -1.69E-46 |
MS.gene05959 | MS.gene66262 | 0.83125 | 1.86E-55 | -1.69E-46 |
MS.gene059676 | MS.gene66262 | 0.882673 | 8.55E-71 | -1.69E-46 |
MS.gene059677 | MS.gene66262 | 0.818099 | 2.34E-52 | -1.69E-46 |
MS.gene059688 | MS.gene66262 | 0.86942 | 3.14E-66 | -1.69E-46 |
MS.gene059692 | MS.gene66262 | 0.859573 | 3.77E-63 | -1.69E-46 |
MS.gene059695 | MS.gene66262 | 0.865178 | 7.13E-65 | -1.69E-46 |
MS.gene059711 | MS.gene66262 | 0.820258 | 7.54E-53 | -1.69E-46 |
MS.gene059718 | MS.gene66262 | 0.848711 | 5.15E-60 | -1.69E-46 |
MS.gene059894 | MS.gene66262 | 0.815012 | 1.15E-51 | -1.69E-46 |
MS.gene059902 | MS.gene66262 | 0.863086 | 3.20E-64 | -1.69E-46 |
MS.gene059960 | MS.gene66262 | 0.955379 | 3.48E-113 | -1.69E-46 |
MS.gene060005 | MS.gene66262 | 0.803934 | 2.75E-49 | -1.69E-46 |
MS.gene060193 | MS.gene66262 | 0.86632 | 3.11E-65 | -1.69E-46 |
MS.gene060403 | MS.gene66262 | 0.832351 | 9.93E-56 | -1.69E-46 |
MS.gene060804 | MS.gene66262 | 0.884778 | 1.43E-71 | -1.69E-46 |
MS.gene060818 | MS.gene66262 | 0.873639 | 1.26E-67 | -1.69E-46 |
MS.gene060835 | MS.gene66262 | 0.805662 | 1.20E-49 | -1.69E-46 |
MS.gene060837 | MS.gene66262 | 0.817796 | 2.74E-52 | -1.69E-46 |
MS.gene06090 | MS.gene66262 | 0.838671 | 2.50E-57 | -1.69E-46 |
MS.gene06092 | MS.gene66262 | 0.840103 | 1.06E-57 | -1.69E-46 |
MS.gene061041 | MS.gene66262 | 0.869828 | 2.31E-66 | -1.69E-46 |
MS.gene061049 | MS.gene66262 | 0.813823 | 2.11E-51 | -1.69E-46 |
MS.gene061051 | MS.gene66262 | -0.843577 | 1.29E-58 | -1.69E-46 |
MS.gene061134 | MS.gene66262 | 0.814288 | 1.66E-51 | -1.69E-46 |
MS.gene061150 | MS.gene66262 | 0.864548 | 1.12E-64 | -1.69E-46 |
MS.gene061171 | MS.gene66262 | 0.81433 | 1.63E-51 | -1.69E-46 |
MS.gene061200 | MS.gene66262 | 0.945429 | 3.11E-104 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66262.t1 | MTR_3g058430 | 95.213 | 188 | 9 | 0 | 1 | 188 | 1 | 188 | 1.95e-115 | 326 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66262.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
MS.gene66262.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
MS.gene66262.t1 | AT3G13120 | 64.398 | 191 | 65 | 1 | 1 | 188 | 1 | 191 | 5.33e-75 | 224 |
Find 0 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATATCACATTAATT+CGG | + | 20996:11734-11753 | None:intergenic | 10.0% |
!!! | TTTAAAGAATTTAAAATTCT+AGG | - | 20996:10861-10880 | MS.gene66262:intron | 10.0% |
!! | AAAAAAAATGCATTAAAATC+TGG | + | 20996:12184-12203 | None:intergenic | 15.0% |
!! | AAAATATATCACATTAATTC+GGG | + | 20996:11733-11752 | None:intergenic | 15.0% |
!! | AACAGTGAAATAATAAAATA+AGG | + | 20996:11907-11926 | None:intergenic | 15.0% |
!! | TTATATGTAGTTTAATATGT+TGG | - | 20996:11075-11094 | MS.gene66262:intron | 15.0% |
!!! | GAATATTGATTTTGTTTAAT+TGG | - | 20996:10181-10200 | MS.gene66262:CDS | 15.0% |
!!! | TATTTTATTATTTCACTGTT+TGG | - | 20996:11907-11926 | MS.gene66262:intron | 15.0% |
!! | AATCTGATTTATATTTGGAT+GGG | - | 20996:10433-10452 | MS.gene66262:intron | 20.0% |
!! | AATGCAATCTGATTTATATT+TGG | - | 20996:10428-10447 | MS.gene66262:intron | 20.0% |
!! | ACAGATAAGTTATAACTTAT+AGG | + | 20996:12541-12560 | None:intergenic | 20.0% |
!! | ACATATTAAATGACTGAAAA+TGG | + | 20996:11365-11384 | None:intergenic | 20.0% |
!! | ATGAATGAAAATGAAGAAAA+GGG | + | 20996:10132-10151 | None:intergenic | 20.0% |
!! | TATAAGTTATAACTTATCTG+TGG | - | 20996:12540-12559 | MS.gene66262:intron | 20.0% |
!! | TGAACATATGAAAAACAATA+GGG | - | 20996:10789-10808 | MS.gene66262:intron | 20.0% |
!! | TTGAACATATGAAAAACAAT+AGG | - | 20996:10788-10807 | MS.gene66262:intron | 20.0% |
!!! | ATTGATTTTGTTTAATTGGT+TGG | - | 20996:10185-10204 | MS.gene66262:CDS | 20.0% |
!!! | GCTTAAAGTTAGTATAATTT+TGG | - | 20996:10520-10539 | MS.gene66262:intron | 20.0% |
!!! | TAAAGTTAGTATAATTTTGG+AGG | - | 20996:10523-10542 | MS.gene66262:intron | 20.0% |
!!! | TTTTCAATCTATTCTTACAT+AGG | - | 20996:10706-10725 | MS.gene66262:intron | 20.0% |
! | AACTTTAAGCTAGAATTTGA+AGG | + | 20996:10510-10529 | None:intergenic | 25.0% |
! | AAGAATGAAAACAGCTAAAT+AGG | + | 20996:12001-12020 | None:intergenic | 25.0% |
! | AGAATGAAAACAGCTAAATA+GGG | + | 20996:12000-12019 | None:intergenic | 25.0% |
! | AGCTTACATTGTTAATGAAA+AGG | - | 20996:11856-11875 | MS.gene66262:intron | 25.0% |
! | ATGTAATAGCAATGAAATCA+TGG | - | 20996:11381-11400 | MS.gene66262:intron | 25.0% |
! | ATTCATGTTTGTATTGTGTT+TGG | - | 20996:10146-10165 | MS.gene66262:CDS | 25.0% |
! | CAATCTGATTTATATTTGGA+TGG | - | 20996:10432-10451 | MS.gene66262:intron | 25.0% |
! | CATGAATGAAAATGAAGAAA+AGG | + | 20996:10133-10152 | None:intergenic | 25.0% |
! | GAACATATGAAAAACAATAG+GGG | - | 20996:10790-10809 | MS.gene66262:intron | 25.0% |
! | TCAAACATTTAGAAAAACGT+AGG | + | 20996:11151-11170 | None:intergenic | 25.0% |
! | TCTTTGTGATAAAAATGTCT+TGG | - | 20996:11188-11207 | MS.gene66262:intron | 25.0% |
! | TGTAATAGCAATGAAATCAT+GGG | - | 20996:11382-11401 | MS.gene66262:intron | 25.0% |
! | TGTTTGATAAGTCAAGTAAT+AGG | - | 20996:11541-11560 | MS.gene66262:intron | 25.0% |
! | TTACAAATTGAGTGTATGTT+TGG | + | 20996:11517-11536 | None:intergenic | 25.0% |
!! | GAGTTAACTGATGATTTTTA+TGG | - | 20996:12495-12514 | MS.gene66262:intron | 25.0% |
!! | GGTTTATATTTGTTTGCTTT+TGG | - | 20996:11312-11331 | MS.gene66262:intron | 25.0% |
!! | TTAACTGATGATTTTTATGG+AGG | - | 20996:12498-12517 | MS.gene66262:intron | 25.0% |
!! | TTTTTCATCCAAAAAATCGA+AGG | - | 20996:11829-11848 | MS.gene66262:intron | 25.0% |
!! | TTTTTGGATGAAAAAAGTGA+TGG | + | 20996:11824-11843 | None:intergenic | 25.0% |
!!! | AAAAATGTCTTGGTGTTTTT+AGG | - | 20996:11198-11217 | MS.gene66262:intron | 25.0% |
!!! | AATTTTGGCTTATGTAAAAG+TGG | - | 20996:10378-10397 | MS.gene66262:intron | 25.0% |
!!! | GATTTGCTATTTTCAATAGT+TGG | - | 20996:11291-11310 | MS.gene66262:intron | 25.0% |
!!! | TAAACTGATTTGATCATGTT+TGG | + | 20996:10347-10366 | None:intergenic | 25.0% |
!!! | TGTTTCTTCGAATTTTTAGA+TGG | - | 20996:12594-12613 | MS.gene66262:intron | 25.0% |
!!! | TTATATTTGTTTGCTTTTGG+AGG | - | 20996:11315-11334 | MS.gene66262:intron | 25.0% |
!!! | TTTACCTCTAGAATCAATTT+TGG | - | 20996:10363-10382 | MS.gene66262:intron | 25.0% |
AACTACCAATGCAAAAACAA+TGG | - | 20996:12705-12724 | MS.gene66262:intron | 30.0% | |
AATAAGGTGCATATAGAGTA+AGG | + | 20996:12041-12060 | None:intergenic | 30.0% | |
AATCAAGCTTAGATCTTACT+TGG | - | 20996:12636-12655 | MS.gene66262:intron | 30.0% | |
AATCCAATGTTTCAGAAGAA+TGG | + | 20996:12090-12109 | None:intergenic | 30.0% | |
AATGTTTCAGAAGAATGGAT+GGG | + | 20996:12085-12104 | None:intergenic | 30.0% | |
AATTGAGTGTATGTTTGGAT+TGG | + | 20996:11512-11531 | None:intergenic | 30.0% | |
ACTACCAATGCAAAAACAAT+GGG | - | 20996:12706-12725 | MS.gene66262:intron | 30.0% | |
AGATAACAATGGTGAAGAAT+TGG | + | 20996:9960-9979 | None:intergenic | 30.0% | |
ATGTTTGAACTCAATTCAGT+TGG | - | 20996:11163-11182 | MS.gene66262:intron | 30.0% | |
GAGGAAATGTAATGTTATGA+GGG | + | 20996:10912-10931 | None:intergenic | 30.0% | |
GGTAATAAAAAAGAGGGAAA+AGG | - | 20996:12372-12391 | MS.gene66262:intron | 30.0% | |
TACTCTATATGCACCTTATT+TGG | - | 20996:12041-12060 | MS.gene66262:intron | 30.0% | |
TGAGGAAATGTAATGTTATG+AGG | + | 20996:10913-10932 | None:intergenic | 30.0% | |
TGATAAAGCCAAACCAAATA+AGG | + | 20996:12057-12076 | None:intergenic | 30.0% | |
TGTAAATGAAAAAGCCGAAA+GGG | + | 20996:11977-11996 | None:intergenic | 30.0% | |
TGTTAATGAAAAGGAACTGA+AGG | - | 20996:11865-11884 | MS.gene66262:intron | 30.0% | |
TTCGTGAATATGAATTTCAC+TGG | - | 20996:11098-11117 | MS.gene66262:intron | 30.0% | |
! | AGCTTTTACCTTCGATTTTT+TGG | + | 20996:11840-11859 | None:intergenic | 30.0% |
! | CTTAGTTCTTAGTGAATGTT+TGG | + | 20996:10658-10677 | None:intergenic | 30.0% |
! | TAAGCCAAAATTGATTCTAG+AGG | + | 20996:10370-10389 | None:intergenic | 30.0% |
! | TATATGCACCTTATTTGGTT+TGG | - | 20996:12046-12065 | MS.gene66262:intron | 30.0% |
! | TGAGCTAAAACTGATTTCAA+AGG | + | 20996:10622-10641 | None:intergenic | 30.0% |
! | TTGATTCTGATTTTCTGCTT+TGG | + | 20996:12622-12641 | None:intergenic | 30.0% |
!! | ACAACAGTTGATAACTTAAG+AGG | + | 20996:10049-10068 | None:intergenic | 30.0% |
!! | TTCTTCTGAAACATTGGATT+TGG | - | 20996:12090-12109 | MS.gene66262:intron | 30.0% |
!! | TTTGGCTTTGAAGATAACAA+TGG | + | 20996:9971-9990 | None:intergenic | 30.0% |
!!! | AGTTTTAGCTCATGTAAAAG+TGG | - | 20996:10630-10649 | MS.gene66262:intron | 30.0% |
AAAGGGTAAGTGAAAGACTT+TGG | + | 20996:11960-11979 | None:intergenic | 35.0% | |
AAGCACAAAGATTGAAGCTT+TGG | + | 20996:9989-10008 | None:intergenic | 35.0% | |
AAGGGTAAGTGAAAGACTTT+GGG | + | 20996:11959-11978 | None:intergenic | 35.0% | |
AAGTCTTTCACTTACCCTTT+CGG | - | 20996:11960-11979 | MS.gene66262:intron | 35.0% | |
ACCTCAGAATTCAAAACTTC+AGG | + | 20996:10082-10101 | None:intergenic | 35.0% | |
AGCACGTCAAAAATTAGCAT+TGG | - | 20996:11241-11260 | MS.gene66262:intron | 35.0% | |
CAATGTTTCAGAAGAATGGA+TGG | + | 20996:12086-12105 | None:intergenic | 35.0% | |
CACGTCAAAAATTAGCATTG+GGG | - | 20996:11243-11262 | MS.gene66262:intron | 35.0% | |
CCTGAGGGTAATAAAAAAGA+GGG | - | 20996:12366-12385 | MS.gene66262:intron | 35.0% | |
GAATCTATTGTTTGTGCTGT+AGG | + | 20996:12853-12872 | None:intergenic | 35.0% | |
GAGGGAATGTAATGTTATGA+GGG | + | 20996:10993-11012 | None:intergenic | 35.0% | |
GAGGGAATTCAAATACTTTG+AGG | + | 20996:10894-10913 | None:intergenic | 35.0% | |
GCACGTCAAAAATTAGCATT+GGG | - | 20996:11242-11261 | MS.gene66262:intron | 35.0% | |
GCATAAAAGCGATGAATTTG+AGG | - | 20996:10459-10478 | MS.gene66262:intron | 35.0% | |
GGGAATGTAATGTAATGTTG+AGG | + | 20996:10931-10950 | None:intergenic | 35.0% | |
GTGAATTCCATTGTTTGGAT+GGG | + | 20996:10953-10972 | None:intergenic | 35.0% | |
GTGTAAATGAAAAAGCCGAA+AGG | + | 20996:11978-11997 | None:intergenic | 35.0% | |
GTTTCAGAACAAGGTTACAT+TGG | - | 20996:11627-11646 | MS.gene66262:intron | 35.0% | |
TACATAGGTAATGAGTACCT+AGG | - | 20996:10721-10740 | MS.gene66262:intron | 35.0% | |
TAGTCATCATCCAATTTCCA+TGG | - | 20996:12448-12467 | MS.gene66262:intron | 35.0% | |
TATGGCATAGTTTCAGAACA+AGG | - | 20996:11618-11637 | MS.gene66262:intron | 35.0% | |
TCAAAAACCTGTGTTTGGAT+GGG | + | 20996:11026-11045 | None:intergenic | 35.0% | |
TCCAAACACACTCTAAATTC+TGG | + | 20996:10824-10843 | None:intergenic | 35.0% | |
TCCTGAGGGTAATAAAAAAG+AGG | - | 20996:12365-12384 | MS.gene66262:intron | 35.0% | |
TGAATTCCATTGTTTGGATG+GGG | + | 20996:10952-10971 | None:intergenic | 35.0% | |
TGAGGGAATGTAATGTTATG+AGG | + | 20996:10994-11013 | None:intergenic | 35.0% | |
TGTGTTTGGATGAGGTAATT+TGG | - | 20996:10834-10853 | MS.gene66262:intron | 35.0% | |
TTGAGGTGAATTCCATTGTT+TGG | + | 20996:10958-10977 | None:intergenic | 35.0% | |
! | ACTATGCCATACTTTTGACA+AGG | + | 20996:11609-11628 | None:intergenic | 35.0% |
! | ACTGCAATTTTGCCAAATCA+TGG | - | 20996:11458-11477 | MS.gene66262:intron | 35.0% |
! | ATGATTTGGCAAAATTGCAG+TGG | + | 20996:11459-11478 | None:intergenic | 35.0% |
! | ATGCTAATTTTTGACGTGCT+TGG | + | 20996:11241-11260 | None:intergenic | 35.0% |
! | ATTTAGAGTGTGTTTGGATG+AGG | - | 20996:10826-10845 | MS.gene66262:intron | 35.0% |
! | CTAGGAATTTTCTCAATGCT+TGG | - | 20996:10739-10758 | MS.gene66262:intron | 35.0% |
! | CTATGCCATACTTTTGACAA+GGG | + | 20996:11608-11627 | None:intergenic | 35.0% |
! | TCCAGAATTTAGAGTGTGTT+TGG | - | 20996:10820-10839 | MS.gene66262:intron | 35.0% |
! | TTAGTGCATCTTTGGATTAG+CGG | - | 20996:11410-11429 | MS.gene66262:intron | 35.0% |
!! | AGCGATGTTACGTTTTAGAT+TGG | - | 20996:11125-11144 | MS.gene66262:intron | 35.0% |
!! | AGCTGTTTTCATTCTTCTGA+GGG | - | 20996:12005-12024 | MS.gene66262:intron | 35.0% |
!! | CAAGCATTGAGAAAATTCCT+AGG | + | 20996:10741-10760 | None:intergenic | 35.0% |
!! | CAATCTTTGTGCTTTGTTTC+TGG | - | 20996:9995-10014 | MS.gene66262:CDS | 35.0% |
!! | CATCCATTCTTCTGAAACAT+TGG | - | 20996:12084-12103 | MS.gene66262:intron | 35.0% |
!! | TAGCTGTTTTCATTCTTCTG+AGG | - | 20996:12004-12023 | MS.gene66262:intron | 35.0% |
!! | TTTTGGAGGCTTCTTATATG+TGG | - | 20996:11329-11348 | MS.gene66262:intron | 35.0% |
!!! | GTGTTTTTAGGTTGATGACT+TGG | - | 20996:11210-11229 | MS.gene66262:intron | 35.0% |
!!! | TCCTGAAGTTTTGAATTCTG+AGG | - | 20996:10078-10097 | MS.gene66262:CDS | 35.0% |
AAAAACCTGTGTTTGGATGG+GGG | + | 20996:11024-11043 | None:intergenic | 40.0% | |
AATCCAAATCCCTGAAACAC+AGG | - | 20996:12318-12337 | MS.gene66262:intron | 40.0% | |
ACCACTGGATAGAAATCAGA+CGG | + | 20996:12244-12263 | None:intergenic | 40.0% | |
AGGCTAAGAATCAATCGTAG+AGG | - | 20996:10479-10498 | MS.gene66262:intron | 40.0% | |
ATGCTCCCTTGTCAAAAGTA+TGG | - | 20996:11600-11619 | MS.gene66262:intron | 40.0% | |
ATGTTTCACTGCTGAGTAAC+TGG | + | 20996:11580-11599 | None:intergenic | 40.0% | |
CAAAAACCTGTGTTTGGATG+GGG | + | 20996:11025-11044 | None:intergenic | 40.0% | |
CCAATTTCCATGGAAAAGTG+AGG | - | 20996:12458-12477 | MS.gene66262:intron | 40.0% | |
CTCAAAAACCTGTGTTTGGA+TGG | + | 20996:11027-11046 | None:intergenic | 40.0% | |
GAATTCCATTGTTTGGATGG+GGG | + | 20996:10951-10970 | None:intergenic | 40.0% | |
GGTGAATTCCATTGTTTGGA+TGG | + | 20996:10954-10973 | None:intergenic | 40.0% | |
TAAATCTCCACACGTACACA+AGG | - | 20996:12771-12790 | MS.gene66262:CDS | 40.0% | |
TGAGTTAGGCAAAATCACAC+TGG | + | 20996:11486-11505 | None:intergenic | 40.0% | |
TGTGTACGTGTGGAGATTTA+AGG | + | 20996:12771-12790 | None:intergenic | 40.0% | |
TTGCAGGAATCCTCTATCAA+GGG | + | 20996:12664-12683 | None:intergenic | 40.0% | |
TTGGAAGAGACAGAAAGAGA+AGG | + | 20996:9941-9960 | None:intergenic | 40.0% | |
! | GATGAGTTCTGATCTCGAAA+TGG | + | 20996:12807-12826 | None:intergenic | 40.0% |
! | TGAGTGTATGTTTGGATTGG+CGG | + | 20996:11509-11528 | None:intergenic | 40.0% |
!! | ATTCGCTTCTTGGTTGGTAA+AGG | + | 20996:12739-12758 | None:intergenic | 40.0% |
!! | CCAAACACAGGTTTTTGAGA+CGG | - | 20996:11028-11047 | MS.gene66262:intron | 40.0% |
!! | CCTCACTTTTCCATGGAAAT+TGG | + | 20996:12461-12480 | None:intergenic | 40.0% |
!! | GGGACATTTTAGTGCATCTT+TGG | - | 20996:11402-11421 | MS.gene66262:intron | 40.0% |
!! | TTCTACTCCTCACTTTTCCA+TGG | + | 20996:12468-12487 | None:intergenic | 40.0% |
!! | TTCTTGGTTGGTAAAGGAAC+AGG | + | 20996:12733-12752 | None:intergenic | 40.0% |
!! | TTGTTTCTGGTAACACGTTG+AGG | - | 20996:10008-10027 | MS.gene66262:CDS | 40.0% |
!!! | AGGACCCATTGTTTTTGCAT+TGG | + | 20996:12713-12732 | None:intergenic | 40.0% |
!!! | AGGTTTTTGAGACGGTGTAA+AGG | - | 20996:11036-11055 | MS.gene66262:intron | 40.0% |
!!! | CCCTCTTTTTTATTACCCTC+AGG | + | 20996:12369-12388 | None:intergenic | 40.0% |
!!! | GGTTTTTGAGACGGTGTAAA+GGG | - | 20996:11037-11056 | MS.gene66262:intron | 40.0% |
!!! | GTTTTTGAGACGGTGTAAAG+GGG | - | 20996:11038-11057 | MS.gene66262:intron | 40.0% |
ACATTCCCCCATCCAAACAA+TGG | - | 20996:10943-10962 | MS.gene66262:intron | 45.0% | |
ACCGTCTGATTTCTATCCAG+TGG | - | 20996:12240-12259 | MS.gene66262:intron | 45.0% | |
ATCACACTATGTGGTTCCTG+AGG | - | 20996:12350-12369 | MS.gene66262:intron | 45.0% | |
ATCACACTGGCACCATGATT+TGG | + | 20996:11473-11492 | None:intergenic | 45.0% | |
CAGTGAATTCGCTTCTTGGT+TGG | + | 20996:12745-12764 | None:intergenic | 45.0% | |
CATTGGGGATAATGCAGACA+TGG | - | 20996:11258-11277 | MS.gene66262:intron | 45.0% | |
CCACATAGTGTGATTGCACA+AGG | + | 20996:12344-12363 | None:intergenic | 45.0% | |
CCGTCTCAAAAACCTGTGTT+TGG | + | 20996:11031-11050 | None:intergenic | 45.0% | |
CCTTGTGCAATCACACTATG+TGG | - | 20996:12341-12360 | MS.gene66262:intron | 45.0% | |
CTTGCAGGAATCCTCTATCA+AGG | + | 20996:12665-12684 | None:intergenic | 45.0% | |
GACACAGTGAATTCGCTTCT+TGG | + | 20996:12749-12768 | None:intergenic | 45.0% | |
TCACACTATGTGGTTCCTGA+GGG | - | 20996:12351-12370 | MS.gene66262:intron | 45.0% | |
TGCAGGAATCCTCTATCAAG+GGG | + | 20996:12663-12682 | None:intergenic | 45.0% | |
TTACTTGGTCCCCTTGATAG+AGG | - | 20996:12651-12670 | MS.gene66262:intron | 45.0% | |
! | AGTGTTGGATCGAGACTAGA+CGG | - | 20996:12157-12176 | MS.gene66262:intron | 45.0% |
! | TTGGATGGGGGAATGTTTTG+AGG | + | 20996:11012-11031 | None:intergenic | 45.0% |
!! | TGGATGGGGGAATGTTTTGA+GGG | + | 20996:11011-11030 | None:intergenic | 45.0% |
ACATTCCCCCATCCAAACAC+AGG | - | 20996:11016-11035 | MS.gene66262:intron | 50.0% | |
AGGCCTGTGTTTCAGGGATT+TGG | + | 20996:12324-12343 | None:intergenic | 50.0% | |
AGTCATGGTCTCATGGACGT+AGG | + | 20996:12269-12288 | None:intergenic | 50.0% | |
ATGCAGCTTGATCTTCCTGC+TGG | - | 20996:12877-12896 | MS.gene66262:CDS | 50.0% | |
CACACGTACACAAGGATGCT+CGG | - | 20996:12779-12798 | MS.gene66262:CDS | 50.0% | |
GGATTCCTGCAAGCAGATAC+TGG | - | 20996:12672-12691 | MS.gene66262:intron | 50.0% | |
TCATGGACGTAGGTAACCAC+TGG | + | 20996:12259-12278 | None:intergenic | 50.0% | |
TCCACACATTCACGCAGTCT+GGG | - | 20996:12125-12144 | MS.gene66262:intron | 50.0% | |
TGCACAAGGCCTGTGTTTCA+GGG | + | 20996:12330-12349 | None:intergenic | 50.0% | |
TGCATCCAGTATCTGCTTGC+AGG | + | 20996:12680-12699 | None:intergenic | 50.0% | |
TTCACGCAGTCATGGTCTCA+TGG | + | 20996:12276-12295 | None:intergenic | 50.0% | |
TTCCACACATTCACGCAGTC+TGG | - | 20996:12124-12143 | MS.gene66262:intron | 50.0% | |
TTGCACAAGGCCTGTGTTTC+AGG | + | 20996:12331-12350 | None:intergenic | 50.0% | |
TTTGGATTTGACGCTGTCCG+CGG | + | 20996:12306-12325 | None:intergenic | 50.0% | |
! | ATTCACGCAGTCTGGGATGT+CGG | - | 20996:12132-12151 | MS.gene66262:intron | 50.0% |
!! | GTTTGGATTGGCGGTGAGTT+AGG | + | 20996:11500-11519 | None:intergenic | 50.0% |
ACTTCGACATCAACGCCAGC+AGG | + | 20996:12895-12914 | None:intergenic | 55.0% | |
CGAGCATCCTTGTGTACGTG+TGG | + | 20996:12781-12800 | None:intergenic | 55.0% | |
GGTGCACATTCACGCAGTCA+TGG | + | 20996:12284-12303 | None:intergenic | 55.0% | |
TCCCAGACTGCGTGAATGTG+TGG | + | 20996:12129-12148 | None:intergenic | 55.0% | |
TTGGATTTGACGCTGTCCGC+GGG | + | 20996:12305-12324 | None:intergenic | 55.0% | |
! | TCTGGGATGTCGGTGAGTGT+TGG | - | 20996:12142-12161 | MS.gene66262:intron | 55.0% |
ACTGCGTGAATGTGCACCCG+CGG | - | 20996:12286-12305 | MS.gene66262:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
20996 | gene | 9905 | 12924 | 9905 | ID=MS.gene66262 |
20996 | mRNA | 9905 | 12924 | 9905 | ID=MS.gene66262.t1;Parent=MS.gene66262 |
20996 | exon | 12730 | 12924 | 12730 | ID=MS.gene66262.t1.exon1;Parent=MS.gene66262.t1 |
20996 | CDS | 12730 | 12924 | 12730 | ID=cds.MS.gene66262.t1;Parent=MS.gene66262.t1 |
20996 | exon | 11550 | 11609 | 11550 | ID=MS.gene66262.t1.exon2;Parent=MS.gene66262.t1 |
20996 | CDS | 11550 | 11609 | 11550 | ID=cds.MS.gene66262.t1;Parent=MS.gene66262.t1 |
20996 | exon | 9905 | 10216 | 9905 | ID=MS.gene66262.t1.exon3;Parent=MS.gene66262.t1 |
20996 | CDS | 9905 | 10216 | 9905 | ID=cds.MS.gene66262.t1;Parent=MS.gene66262.t1 |
Gene Sequence |
Protein sequence |