Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066053.t1 | XP_013469123.1 | 96.8 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 3.40E-134 | 487.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066053.t1 | Q41651 | 79.8 | 253 | 44 | 2 | 1 | 251 | 1 | 248 | 1.6e-108 | 393.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066053.t1 | A0A072VNE4 | 96.8 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 2.4e-134 | 487.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene066053 | 0.842364 | 2.71E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene066053 | 0.818748 | 1.67E-52 | -1.69E-46 |
| MS.gene049284 | MS.gene066053 | 0.827394 | 1.60E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene066053 | 0.834554 | 2.80E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene066053 | 0.814642 | 1.39E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene066053 | 0.836526 | 8.89E-57 | -1.69E-46 |
| MS.gene049389 | MS.gene066053 | 0.806233 | 9.09E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene066053 | 0.892679 | 1.27E-74 | -1.69E-46 |
| MS.gene049491 | MS.gene066053 | 0.859359 | 4.37E-63 | -1.69E-46 |
| MS.gene049609 | MS.gene066053 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene066053 | 0.837001 | 6.72E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene066053 | 0.868893 | 4.65E-66 | -1.69E-46 |
| MS.gene049662 | MS.gene066053 | 0.861945 | 7.18E-64 | -1.69E-46 |
| MS.gene049758 | MS.gene066053 | 0.834117 | 3.61E-56 | -1.69E-46 |
| MS.gene049760 | MS.gene066053 | 0.840915 | 6.52E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene066053 | 0.872851 | 2.31E-67 | -1.69E-46 |
| MS.gene050076 | MS.gene066053 | 0.889049 | 3.43E-73 | -1.69E-46 |
| MS.gene050099 | MS.gene066053 | 0.815852 | 7.47E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene066053 | 0.805169 | 1.52E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene066053 | 0.805248 | 1.46E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene066053 | 0.863821 | 1.89E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene066053 | 0.813671 | 2.27E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene066053 | 0.859368 | 4.34E-63 | -1.69E-46 |
| MS.gene050404 | MS.gene066053 | 0.808277 | 3.35E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene066053 | 0.823005 | 1.75E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene066053 | 0.896959 | 2.24E-76 | -1.69E-46 |
| MS.gene050464 | MS.gene066053 | 0.857816 | 1.26E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene066053 | 0.876547 | 1.28E-68 | -1.69E-46 |
| MS.gene05053 | MS.gene066053 | 0.826578 | 2.51E-54 | -1.69E-46 |
| MS.gene050593 | MS.gene066053 | 0.850881 | 1.27E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene066053 | 0.840815 | 6.93E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene066053 | 0.907869 | 3.18E-81 | -1.69E-46 |
| MS.gene050770 | MS.gene066053 | 0.909071 | 8.54E-82 | -1.69E-46 |
| MS.gene050772 | MS.gene066053 | 0.839649 | 1.40E-57 | -1.69E-46 |
| MS.gene050783 | MS.gene066053 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene066053 | 0.843662 | 1.22E-58 | -1.69E-46 |
| MS.gene05100 | MS.gene066053 | 0.804239 | 2.38E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene066053 | 0.891692 | 3.15E-74 | -1.69E-46 |
| MS.gene05105 | MS.gene066053 | 0.864175 | 1.47E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene066053 | 0.873698 | 1.20E-67 | -1.69E-46 |
| MS.gene051387 | MS.gene066053 | 0.839987 | 1.14E-57 | -1.69E-46 |
| MS.gene051471 | MS.gene066053 | 0.886806 | 2.48E-72 | -1.69E-46 |
| MS.gene051582 | MS.gene066053 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene066053 | 0.877573 | 5.64E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene066053 | 0.837381 | 5.38E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene066053 | 0.822396 | 2.42E-53 | -1.69E-46 |
| MS.gene051877 | MS.gene066053 | 0.825428 | 4.71E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene066053 | 0.896129 | 4.96E-76 | -1.69E-46 |
| MS.gene052178 | MS.gene066053 | 0.837296 | 5.65E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene066053 | 0.855835 | 4.83E-62 | -1.69E-46 |
| MS.gene052253 | MS.gene066053 | 0.812308 | 4.52E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene066053 | 0.851934 | 6.42E-61 | -1.69E-46 |
| MS.gene052290 | MS.gene066053 | 0.864669 | 1.03E-64 | -1.69E-46 |
| MS.gene052293 | MS.gene066053 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene066053 | 0.919008 | 7.69E-87 | -1.69E-46 |
| MS.gene052322 | MS.gene066053 | 0.838985 | 2.08E-57 | -1.69E-46 |
| MS.gene052326 | MS.gene066053 | 0.865671 | 4.99E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene066053 | 0.864847 | 9.06E-65 | -1.69E-46 |
| MS.gene052379 | MS.gene066053 | 0.868546 | 6.02E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene066053 | 0.857382 | 1.70E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene066053 | 0.833433 | 5.35E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene066053 | 0.847073 | 1.46E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene066053 | 0.832889 | 7.31E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene066053 | 0.823201 | 1.57E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene066053 | 0.839361 | 1.66E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene066053 | 0.898072 | 7.59E-77 | -1.69E-46 |
| MS.gene053104 | MS.gene066053 | 0.890363 | 1.05E-73 | -1.69E-46 |
| MS.gene053107 | MS.gene066053 | 0.820789 | 5.70E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene066053 | 0.818177 | 2.25E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene066053 | 0.87131 | 7.53E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene066053 | 0.825856 | 3.73E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene066053 | 0.808035 | 3.77E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene066053 | 0.914135 | 2.73E-84 | -1.69E-46 |
| MS.gene053384 | MS.gene066053 | 0.842056 | 3.26E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene066053 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene066053 | 0.861721 | 8.41E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene066053 | 0.81966 | 1.03E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene066053 | 0.81623 | 6.16E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene066053 | 0.816703 | 4.82E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene066053 | 0.821872 | 3.20E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene066053 | 0.862844 | 3.80E-64 | -1.69E-46 |
| MS.gene054376 | MS.gene066053 | 0.907623 | 4.15E-81 | -1.69E-46 |
| MS.gene054543 | MS.gene066053 | 0.809637 | 1.71E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene066053 | 0.828277 | 9.83E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene066053 | 0.833903 | 4.08E-56 | -1.69E-46 |
| MS.gene054802 | MS.gene066053 | 0.883622 | 3.84E-71 | -1.69E-46 |
| MS.gene054803 | MS.gene066053 | 0.880668 | 4.54E-70 | -1.69E-46 |
| MS.gene054804 | MS.gene066053 | 0.886014 | 4.94E-72 | -1.69E-46 |
| MS.gene054955 | MS.gene066053 | 0.864754 | 9.68E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene066053 | 0.859723 | 3.39E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene066053 | 0.864445 | 1.21E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene066053 | 0.831948 | 1.25E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene066053 | 0.869362 | 3.28E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene066053 | 0.902188 | 1.25E-78 | -1.69E-46 |
| MS.gene055289 | MS.gene066053 | 0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene066053 | 0.848051 | 7.84E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene066053 | 0.904614 | 1.02E-79 | -1.69E-46 |
| MS.gene055412 | MS.gene066053 | 0.853455 | 2.36E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene066053 | 0.868411 | 6.66E-66 | -1.69E-46 |
| MS.gene055428 | MS.gene066053 | 0.845934 | 2.98E-59 | -1.69E-46 |
| MS.gene055497 | MS.gene066053 | -0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene055499 | MS.gene066053 | 0.874829 | 4.97E-68 | -1.69E-46 |
| MS.gene055533 | MS.gene066053 | 0.827751 | 1.32E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene066053 | 0.827375 | 1.62E-54 | -1.69E-46 |
| MS.gene055638 | MS.gene066053 | 0.808124 | 3.61E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene066053 | 0.861515 | 9.72E-64 | -1.69E-46 |
| MS.gene055722 | MS.gene066053 | 0.837798 | 4.20E-57 | -1.69E-46 |
| MS.gene055896 | MS.gene066053 | 0.878913 | 1.91E-69 | -1.69E-46 |
| MS.gene05592 | MS.gene066053 | 0.890089 | 1.35E-73 | -1.69E-46 |
| MS.gene055930 | MS.gene066053 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene066053 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene066053 | 0.810589 | 1.07E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene066053 | 0.837895 | 3.97E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene066053 | 0.824684 | 7.06E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene066053 | 0.857894 | 1.20E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene066053 | 0.858296 | 9.08E-63 | -1.69E-46 |
| MS.gene056422 | MS.gene066053 | 0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene066053 | 0.844054 | 9.59E-59 | -1.69E-46 |
| MS.gene056609 | MS.gene066053 | 0.907793 | 3.45E-81 | -1.69E-46 |
| MS.gene056612 | MS.gene066053 | 0.849104 | 4.01E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene066053 | 0.802187 | 6.32E-49 | -1.69E-46 |
| MS.gene056719 | MS.gene066053 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene066053 | 0.84179 | 3.84E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene066053 | 0.836962 | 6.88E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene066053 | 0.886819 | 2.45E-72 | -1.69E-46 |
| MS.gene05702 | MS.gene066053 | 0.848329 | 6.57E-60 | -1.69E-46 |
| MS.gene057123 | MS.gene066053 | 0.882278 | 1.19E-70 | -1.69E-46 |
| MS.gene057124 | MS.gene066053 | 0.814118 | 1.81E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene066053 | 0.901795 | 1.87E-78 | -1.69E-46 |
| MS.gene057146 | MS.gene066053 | 0.872116 | 4.07E-67 | -1.69E-46 |
| MS.gene057246 | MS.gene066053 | 0.81171 | 6.11E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene066053 | 0.879811 | 9.18E-70 | -1.69E-46 |
| MS.gene057331 | MS.gene066053 | 0.842552 | 2.41E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene066053 | 0.828223 | 1.01E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene066053 | 0.854227 | 1.42E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene066053 | 0.868401 | 6.71E-66 | -1.69E-46 |
| MS.gene057448 | MS.gene066053 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene066053 | 0.822798 | 1.95E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene066053 | 0.830746 | 2.47E-55 | -1.69E-46 |
| MS.gene057537 | MS.gene066053 | 0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene066053 | 0.805271 | 1.45E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene066053 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene066053 | 0.819714 | 1.00E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene066053 | 0.838005 | 3.72E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene066053 | 0.849072 | 4.09E-60 | -1.69E-46 |
| MS.gene058006 | MS.gene066053 | 0.82661 | 2.47E-54 | -1.69E-46 |
| MS.gene058019 | MS.gene066053 | 0.875972 | 2.02E-68 | -1.69E-46 |
| MS.gene058082 | MS.gene066053 | 0.843654 | 1.23E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene066053 | 0.831382 | 1.72E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene066053 | 0.845434 | 4.07E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene066053 | 0.915338 | 6.63E-85 | -1.69E-46 |
| MS.gene058323 | MS.gene066053 | 0.83025 | 3.26E-55 | -1.69E-46 |
| MS.gene058365 | MS.gene066053 | 0.837128 | 6.24E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene066053 | 0.812588 | 3.93E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene066053 | 0.914124 | 2.77E-84 | -1.69E-46 |
| MS.gene058723 | MS.gene066053 | 0.800546 | 1.37E-48 | -1.69E-46 |
| MS.gene058787 | MS.gene066053 | 0.836797 | 7.58E-57 | -1.69E-46 |
| MS.gene058903 | MS.gene066053 | 0.811873 | 5.63E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene066053 | 0.871945 | 4.64E-67 | -1.69E-46 |
| MS.gene058993 | MS.gene066053 | 0.816508 | 5.33E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene066053 | 0.815376 | 9.54E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene066053 | 0.857684 | 1.38E-62 | -1.69E-46 |
| MS.gene059326 | MS.gene066053 | 0.888663 | 4.84E-73 | -1.69E-46 |
| MS.gene059342 | MS.gene066053 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene066053 | 0.837861 | 4.05E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene066053 | 0.832243 | 1.06E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene066053 | 0.823202 | 1.57E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene066053 | 0.901771 | 1.91E-78 | -1.69E-46 |
| MS.gene059597 | MS.gene066053 | 0.895413 | 9.81E-76 | -1.69E-46 |
| MS.gene05959 | MS.gene066053 | 0.855671 | 5.39E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene066053 | 0.907731 | 3.69E-81 | -1.69E-46 |
| MS.gene059688 | MS.gene066053 | 0.89568 | 7.61E-76 | -1.69E-46 |
| MS.gene059692 | MS.gene066053 | 0.904516 | 1.13E-79 | -1.69E-46 |
| MS.gene059695 | MS.gene066053 | 0.902791 | 6.75E-79 | -1.69E-46 |
| MS.gene059708 | MS.gene066053 | 0.844973 | 5.43E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene066053 | 0.836093 | 1.15E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene066053 | 0.80817 | 3.53E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene066053 | 0.809503 | 1.83E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene066053 | 0.814524 | 1.47E-51 | -1.69E-46 |
| MS.gene059858 | MS.gene066053 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene066053 | 0.877165 | 7.82E-69 | -1.69E-46 |
| MS.gene059902 | MS.gene066053 | 0.821832 | 3.27E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene066053 | 0.936846 | 9.03E-98 | -1.69E-46 |
| MS.gene059974 | MS.gene066053 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene066053 | 0.818226 | 2.19E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene066053 | 0.84895 | 4.42E-60 | -1.69E-46 |
| MS.gene06037 | MS.gene066053 | 0.835517 | 1.60E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene066053 | 0.846902 | 1.62E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene066053 | 0.820736 | 5.86E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene066053 | 0.903079 | 5.02E-79 | -1.69E-46 |
| MS.gene060818 | MS.gene066053 | 0.899044 | 2.92E-77 | -1.69E-46 |
| MS.gene060835 | MS.gene066053 | 0.817636 | 2.98E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene066053 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene066053 | 0.81951 | 1.12E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene066053 | 0.808888 | 2.48E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene066053 | 0.891896 | 2.61E-74 | -1.69E-46 |
| MS.gene061049 | MS.gene066053 | 0.870752 | 1.15E-66 | -1.69E-46 |
| MS.gene061051 | MS.gene066053 | -0.897708 | 1.08E-76 | -1.69E-46 |
| MS.gene061150 | MS.gene066053 | 0.814452 | 1.53E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene066053 | 0.906257 | 1.80E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066053.t1 | MTR_1g085560 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 503 |
| MS.gene066053.t1 | MTR_7g110980 | 69.650 | 257 | 71 | 5 | 1 | 251 | 6 | 261 | 3.84e-118 | 338 |
| MS.gene066053.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 52 | 249 | 48 | 243 | 2.90e-88 | 262 |
| MS.gene066053.t1 | MTR_1g117010 | 64.677 | 201 | 63 | 3 | 52 | 249 | 48 | 243 | 2.90e-88 | 262 |
| MS.gene066053.t1 | MTR_3g463900 | 65.027 | 183 | 55 | 2 | 74 | 249 | 23 | 203 | 1.09e-77 | 233 |
| MS.gene066053.t1 | MTR_3g070500 | 63.842 | 177 | 54 | 3 | 78 | 247 | 58 | 231 | 1.41e-72 | 221 |
| MS.gene066053.t1 | MTR_7g116340 | 67.808 | 146 | 40 | 1 | 86 | 224 | 5 | 150 | 6.24e-69 | 210 |
| MS.gene066053.t1 | MTR_4g075290 | 65.101 | 149 | 45 | 1 | 83 | 224 | 2 | 150 | 1.40e-68 | 209 |
| MS.gene066053.t1 | MTR_3g117750 | 66.438 | 146 | 42 | 1 | 86 | 224 | 13 | 158 | 5.38e-67 | 206 |
| MS.gene066053.t1 | MTR_8g040180 | 58.084 | 167 | 63 | 3 | 87 | 247 | 20 | 185 | 4.93e-62 | 193 |
| MS.gene066053.t1 | MTR_7g095750 | 59.763 | 169 | 58 | 2 | 87 | 247 | 9 | 175 | 3.08e-61 | 204 |
| MS.gene066053.t1 | MTR_4g073650 | 52.604 | 192 | 79 | 3 | 68 | 248 | 25 | 215 | 4.64e-61 | 192 |
| MS.gene066053.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 2.61e-60 | 194 |
| MS.gene066053.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 3.06e-60 | 192 |
| MS.gene066053.t1 | MTR_4g086760 | 56.977 | 172 | 65 | 2 | 85 | 248 | 4 | 174 | 3.88e-60 | 193 |
| MS.gene066053.t1 | MTR_8g079690 | 57.647 | 170 | 63 | 2 | 86 | 247 | 5 | 173 | 3.90e-60 | 194 |
| MS.gene066053.t1 | MTR_3g070500 | 68.939 | 132 | 33 | 2 | 78 | 202 | 58 | 188 | 3.30e-57 | 181 |
| MS.gene066053.t1 | MTR_3g070500 | 68.224 | 107 | 26 | 2 | 78 | 177 | 58 | 163 | 2.68e-42 | 142 |
| MS.gene066053.t1 | MTR_3g070500 | 67.925 | 106 | 26 | 2 | 78 | 176 | 58 | 162 | 8.38e-42 | 140 |
| MS.gene066053.t1 | MTR_1g011980 | 46.409 | 181 | 86 | 3 | 79 | 251 | 1 | 178 | 1.70e-41 | 151 |
| MS.gene066053.t1 | MTR_2g085075 | 43.850 | 187 | 98 | 6 | 58 | 243 | 431 | 611 | 1.30e-40 | 147 |
| MS.gene066053.t1 | MTR_3g107660 | 47.399 | 173 | 81 | 2 | 87 | 251 | 12 | 182 | 2.57e-40 | 148 |
| MS.gene066053.t1 | MTR_7g105220 | 49.664 | 149 | 69 | 5 | 97 | 244 | 17 | 160 | 1.31e-39 | 135 |
| MS.gene066053.t1 | MTR_3g085705 | 61.290 | 93 | 32 | 2 | 137 | 229 | 32 | 120 | 1.80e-34 | 120 |
| MS.gene066053.t1 | MTR_8g036015 | 50.345 | 145 | 64 | 5 | 99 | 241 | 10 | 148 | 8.76e-33 | 117 |
| MS.gene066053.t1 | MTR_5g015500 | 47.222 | 144 | 70 | 5 | 99 | 241 | 314 | 452 | 1.72e-29 | 116 |
| MS.gene066053.t1 | MTR_5g015500 | 47.222 | 144 | 70 | 5 | 99 | 241 | 354 | 492 | 2.69e-29 | 115 |
| MS.gene066053.t1 | MTR_2g023120 | 44.872 | 156 | 74 | 8 | 92 | 242 | 15 | 163 | 1.25e-21 | 94.0 |
| MS.gene066053.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 97 | 250 | 8 | 167 | 2.62e-16 | 78.2 |
| MS.gene066053.t1 | MTR_6g084140 | 37.500 | 168 | 83 | 9 | 97 | 250 | 25 | 184 | 2.72e-16 | 78.2 |
| MS.gene066053.t1 | MTR_8g442420 | 36.905 | 168 | 84 | 9 | 97 | 250 | 8 | 167 | 3.66e-15 | 75.1 |
| MS.gene066053.t1 | MTR_2g461260 | 27.094 | 203 | 107 | 8 | 71 | 234 | 44 | 244 | 2.06e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066053.t1 | AT3G62030 | 62.121 | 264 | 80 | 7 | 1 | 250 | 1 | 258 | 7.16e-106 | 307 |
| MS.gene066053.t1 | AT3G62030 | 61.887 | 265 | 80 | 7 | 1 | 250 | 1 | 259 | 1.03e-105 | 306 |
| MS.gene066053.t1 | AT3G62030 | 70.370 | 216 | 55 | 4 | 42 | 251 | 101 | 313 | 1.00e-104 | 306 |
| MS.gene066053.t1 | AT5G13120 | 64.615 | 195 | 61 | 3 | 62 | 249 | 59 | 252 | 6.68e-87 | 259 |
| MS.gene066053.t1 | AT5G13120 | 64.615 | 195 | 61 | 3 | 62 | 249 | 63 | 256 | 8.40e-87 | 258 |
| MS.gene066053.t1 | AT2G29960 | 65.405 | 185 | 50 | 3 | 77 | 249 | 19 | 201 | 7.12e-77 | 231 |
| MS.gene066053.t1 | AT2G29960 | 65.405 | 185 | 50 | 3 | 77 | 249 | 19 | 201 | 7.12e-77 | 231 |
| MS.gene066053.t1 | AT5G58710 | 66.286 | 175 | 50 | 2 | 82 | 249 | 32 | 204 | 5.48e-76 | 229 |
| MS.gene066053.t1 | AT3G55920 | 58.462 | 195 | 71 | 3 | 62 | 249 | 37 | 228 | 1.01e-71 | 219 |
| MS.gene066053.t1 | AT2G21130 | 62.722 | 169 | 54 | 2 | 86 | 247 | 6 | 172 | 2.04e-71 | 216 |
| MS.gene066053.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 86 | 247 | 5 | 171 | 5.68e-70 | 213 |
| MS.gene066053.t1 | AT3G56070 | 62.722 | 169 | 54 | 2 | 86 | 247 | 5 | 171 | 5.68e-70 | 213 |
| MS.gene066053.t1 | AT4G38740 | 60.947 | 169 | 57 | 2 | 86 | 247 | 5 | 171 | 2.85e-69 | 211 |
| MS.gene066053.t1 | AT2G16600 | 66.438 | 146 | 42 | 1 | 86 | 224 | 6 | 151 | 1.31e-68 | 209 |
| MS.gene066053.t1 | AT2G29960 | 60.428 | 187 | 50 | 4 | 75 | 249 | 17 | 191 | 8.27e-68 | 208 |
| MS.gene066053.t1 | AT4G34870 | 57.396 | 169 | 63 | 2 | 86 | 247 | 5 | 171 | 1.29e-62 | 194 |
| MS.gene066053.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 79 | 246 | 1 | 174 | 1.99e-61 | 198 |
| MS.gene066053.t1 | AT2G38730 | 57.485 | 167 | 64 | 3 | 87 | 247 | 34 | 199 | 4.55e-61 | 191 |
| MS.gene066053.t1 | AT4G34960 | 55.682 | 176 | 70 | 2 | 82 | 250 | 44 | 218 | 1.67e-60 | 190 |
| MS.gene066053.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 79 | 246 | 1 | 174 | 7.75e-60 | 198 |
| MS.gene066053.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 79 | 246 | 1 | 174 | 7.75e-60 | 198 |
| MS.gene066053.t1 | AT3G63400 | 57.955 | 176 | 64 | 2 | 79 | 246 | 1 | 174 | 7.75e-60 | 198 |
| MS.gene066053.t1 | AT2G15790 | 58.721 | 172 | 62 | 2 | 85 | 248 | 4 | 174 | 1.03e-59 | 193 |
| MS.gene066053.t1 | AT2G16600 | 61.871 | 139 | 38 | 1 | 86 | 224 | 6 | 129 | 2.49e-58 | 182 |
| MS.gene066053.t1 | AT4G34960 | 60.156 | 128 | 44 | 1 | 82 | 202 | 44 | 171 | 1.26e-47 | 155 |
| MS.gene066053.t1 | AT3G44600 | 44.920 | 187 | 96 | 6 | 58 | 243 | 445 | 625 | 3.35e-41 | 149 |
| MS.gene066053.t1 | AT2G36130 | 48.993 | 149 | 70 | 5 | 97 | 244 | 17 | 160 | 3.39e-39 | 134 |
| MS.gene066053.t1 | AT3G22920 | 43.605 | 172 | 80 | 5 | 85 | 247 | 4 | 167 | 2.05e-35 | 126 |
| MS.gene066053.t1 | AT4G32420 | 44.318 | 176 | 88 | 2 | 79 | 246 | 1 | 174 | 3.61e-35 | 133 |
| MS.gene066053.t1 | AT4G32420 | 44.318 | 176 | 88 | 2 | 79 | 246 | 1 | 174 | 3.61e-35 | 133 |
| MS.gene066053.t1 | AT4G32420 | 44.318 | 176 | 88 | 2 | 79 | 246 | 1 | 174 | 3.61e-35 | 133 |
| MS.gene066053.t1 | AT4G32420 | 44.318 | 176 | 88 | 2 | 79 | 246 | 1 | 174 | 3.61e-35 | 133 |
| MS.gene066053.t1 | AT4G32420 | 47.403 | 154 | 73 | 1 | 79 | 224 | 1 | 154 | 4.74e-34 | 130 |
| MS.gene066053.t1 | AT1G01940 | 51.515 | 132 | 57 | 4 | 99 | 228 | 10 | 136 | 1.32e-32 | 117 |
| MS.gene066053.t1 | AT5G67530 | 44.898 | 147 | 75 | 5 | 99 | 244 | 353 | 494 | 1.70e-29 | 116 |
| MS.gene066053.t1 | AT4G33060 | 48.800 | 125 | 56 | 5 | 92 | 213 | 15 | 134 | 7.56e-26 | 105 |
| MS.gene066053.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 97 | 250 | 8 | 167 | 4.96e-17 | 79.7 |
| MS.gene066053.t1 | AT1G53720 | 36.970 | 165 | 88 | 7 | 97 | 250 | 8 | 167 | 6.38e-17 | 80.1 |
| MS.gene066053.t1 | AT3G66654 | 23.967 | 242 | 149 | 8 | 1 | 231 | 1 | 218 | 4.09e-12 | 64.3 |
| MS.gene066053.t1 | AT3G66654 | 23.967 | 242 | 149 | 8 | 1 | 231 | 1 | 218 | 4.09e-12 | 64.3 |
| MS.gene066053.t1 | AT3G66654 | 23.967 | 242 | 149 | 8 | 1 | 231 | 1 | 218 | 4.09e-12 | 64.3 |
| MS.gene066053.t1 | AT3G66654 | 23.967 | 242 | 149 | 8 | 1 | 231 | 1 | 218 | 4.09e-12 | 64.3 |
| MS.gene066053.t1 | AT3G66654 | 23.967 | 242 | 149 | 8 | 1 | 231 | 1 | 218 | 4.09e-12 | 64.3 |
| MS.gene066053.t1 | AT2G47320 | 31.818 | 132 | 83 | 4 | 99 | 230 | 87 | 211 | 7.21e-11 | 60.8 |
Find 55 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGTCAGAACCTTCTTTC+TGG | 0.154886 | 1.2:-58548463 | MS.gene066053:CDS |
| AGGATTGTTATTGGCCTATT+TGG | 0.177067 | 1.2:-58547678 | MS.gene066053:CDS |
| AATCAAAGATTTCATGATTC+AGG | 0.190133 | 1.2:-58547453 | MS.gene066053:CDS |
| GACAATCGCCATGTTGTATT+TGG | 0.201360 | 1.2:-58545964 | MS.gene066053:CDS |
| TCGGAAATTCTCAACTGTTT+TGG | 0.213114 | 1.2:+58547644 | None:intergenic |
| AATTGACTGCCGTTACTATT+AGG | 0.258601 | 1.2:+58547021 | None:intergenic |
| TCTGCTGGAAGGATTGTTAT+TGG | 0.310916 | 1.2:-58547687 | MS.gene066053:CDS |
| GAAAACCTTGCTTGTTACTT+TGG | 0.335769 | 1.2:+58547734 | None:intergenic |
| TCATTACGCGGCTAGGCTTT+CGG | 0.339565 | 1.2:-58547959 | MS.gene066053:CDS |
| TGGGAACAACATCTCCAAAT+AGG | 0.365016 | 1.2:+58547664 | None:intergenic |
| ACTGGTGGAGTCAGTATCTA+TGG | 0.378727 | 1.2:-58547300 | MS.gene066053:CDS |
| AAGCGAAATCAATCACTTCT+CGG | 0.414942 | 1.2:-58547921 | MS.gene066053:CDS |
| TTCTGGTTTCAATGCTGTCC+AGG | 0.432366 | 1.2:-58548446 | MS.gene066053:intron |
| TGTGCAGGAGAGAAAGGATA+TGG | 0.434325 | 1.2:-58547503 | MS.gene066053:intron |
| TCTGGAGAACTTCCTCTAGA+TGG | 0.439502 | 1.2:-58545844 | MS.gene066053:CDS |
| TTCTTTGATGTAGTTATTGG+AGG | 0.441576 | 1.2:-58547714 | MS.gene066053:CDS |
| ATCAAAGATTTCATGATTCA+GGG | 0.450983 | 1.2:-58547452 | MS.gene066053:CDS |
| GTATTTGGACATGTCATTGA+TGG | 0.451288 | 1.2:-58545949 | MS.gene066053:CDS |
| ATCTTTGTTCTCAACACAGT+TGG | 0.459490 | 1.2:-58548488 | MS.gene066053:CDS |
| AGATTTCATGATTCAGGGAG+GGG | 0.477957 | 1.2:-58547447 | MS.gene066053:CDS |
| AATAACTGTGCAGGAGAGAA+AGG | 0.485014 | 1.2:-58547509 | MS.gene066053:intron |
| GGATGCAGTAAATTGTCATC+AGG | 0.485711 | 1.2:-58547985 | MS.gene066053:CDS |
| AATTTCCGAGCTTTGTGCAC+AGG | 0.492690 | 1.2:-58547630 | MS.gene066053:intron |
| GCAGTGAAGCATGTTGGTCC+TGG | 0.495639 | 1.2:-58547069 | MS.gene066053:intron |
| ACTGCATCCAAGGTGTGCTC+TGG | 0.499496 | 1.2:+58547999 | None:intergenic |
| ACATGCAAAATTGTTAACTC+TGG | 0.506072 | 1.2:-58545862 | MS.gene066053:CDS |
| TTTAATTGGATGCAGGGAAC+TGG | 0.519277 | 1.2:-58547318 | MS.gene066053:intron |
| GCTTACCTGTGCACAAAGCT+CGG | 0.530446 | 1.2:+58547625 | None:intergenic |
| CAGGATATCATTACGCGGCT+AGG | 0.536024 | 1.2:-58547966 | MS.gene066053:CDS |
| TTTGATTATGCGATGGAAGG+TGG | 0.537643 | 1.2:+58547469 | None:intergenic |
| CATGTTGTAGACTTCATGGT+TGG | 0.543936 | 1.2:-58545986 | MS.gene066053:intron |
| TGGACATGTCATTGATGGAA+TGG | 0.546157 | 1.2:-58545944 | MS.gene066053:CDS |
| TTTGCCATGCTCAAAACTCC+AGG | 0.566786 | 1.2:+58547051 | None:intergenic |
| GTTATTGGAGGTGAATCTGC+TGG | 0.567014 | 1.2:-58547702 | MS.gene066053:CDS |
| ATGACAATTTACTGCATCCA+AGG | 0.568939 | 1.2:+58547989 | None:intergenic |
| TGAAATCTTTGATTATGCGA+TGG | 0.571761 | 1.2:+58547462 | None:intergenic |
| AAGATTTCATGATTCAGGGA+GGG | 0.575956 | 1.2:-58547448 | MS.gene066053:CDS |
| TGTGAGGACACTTGAATCAC+AGG | 0.579355 | 1.2:-58545917 | MS.gene066053:CDS |
| AATTGGATGCAGGGAACTGG+TGG | 0.579513 | 1.2:-58547315 | MS.gene066053:intron |
| TTCCTTGCAGTGAAGCATGT+TGG | 0.583628 | 1.2:-58547075 | MS.gene066053:intron |
| CAGCATTGAAACCAGAAAGA+AGG | 0.585026 | 1.2:+58548452 | None:intergenic |
| ACTGCCGTTACTATTAGGAC+CGG | 0.594476 | 1.2:+58547026 | None:intergenic |
| ATCTTTGATTATGCGATGGA+AGG | 0.597625 | 1.2:+58547466 | None:intergenic |
| GAGACAAGCAGCTACAACAA+TGG | 0.607894 | 1.2:-58545895 | MS.gene066053:CDS |
| TTGGAGGTGAATCTGCTGGA+AGG | 0.612520 | 1.2:-58547698 | MS.gene066053:CDS |
| CAGGGAGGGGACTTCACAGA+AGG | 0.623364 | 1.2:-58547434 | MS.gene066053:CDS |
| AGCAGTACCAGAGCACACCT+TGG | 0.625062 | 1.2:-58548006 | MS.gene066053:CDS |
| GCAAGCCAAAGTAACAAGCA+AGG | 0.646742 | 1.2:-58547739 | MS.gene066053:CDS |
| AATGCCGGTCCTAATAGTAA+CGG | 0.652519 | 1.2:-58547030 | MS.gene066053:CDS |
| AGGAGAGATCAACCATCTAG+AGG | 0.666652 | 1.2:+58545832 | None:intergenic |
| AAAGATTTCATGATTCAGGG+AGG | 0.670380 | 1.2:-58547449 | MS.gene066053:CDS |
| GGTGGAGTCAGTATCTATGG+TGG | 0.680041 | 1.2:-58547297 | MS.gene066053:CDS |
| TGACATGTCCAAATACAACA+TGG | 0.711914 | 1.2:+58545956 | None:intergenic |
| TTGATGGAATGGATGTTGTG+AGG | 0.719565 | 1.2:-58545933 | MS.gene066053:CDS |
| GTCATCAGGATATCATTACG+CGG | 0.726671 | 1.2:-58547971 | MS.gene066053:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATATTATTAAAACTT+GGG | + | chr1.2:58547752-58547771 | None:intergenic | 10.0% |
| !! | CTTATTTAAATAAATTTCAA+AGG | + | chr1.2:58547496-58547515 | None:intergenic | 10.0% |
| !! | ACAAATTTAAATCTGAATAA+TGG | + | chr1.2:58547169-58547188 | None:intergenic | 15.0% |
| !! | ATATATATATATGTTCTTCA+AGG | + | chr1.2:58546082-58546101 | None:intergenic | 15.0% |
| !! | GAAAACATATTATTAAAACT+TGG | + | chr1.2:58547753-58547772 | None:intergenic | 15.0% |
| !! | TAATCTAATAAACTATTCTA+AGG | - | chr1.2:58547440-58547459 | MS.gene066053:CDS | 15.0% |
| !! | TATATATATATGTTCTTCAA+GGG | + | chr1.2:58546081-58546100 | None:intergenic | 15.0% |
| !!! | AAATTAGAGTTTTGAAATAT+AGG | + | chr1.2:58547918-58547937 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGTTTTCATTTTA+GGG | - | chr1.2:58546285-58546304 | MS.gene066053:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTCATTTT+AGG | - | chr1.2:58546284-58546303 | MS.gene066053:intron | 15.0% |
| !! | AATATTCCTTGTATGTAAAA+GGG | + | chr1.2:58547788-58547807 | None:intergenic | 20.0% |
| !! | ATTACTTTATGAATCAGATA+AGG | - | chr1.2:58547377-58547396 | MS.gene066053:intron | 20.0% |
| !! | ATTCATAAAGTAATAGAAGA+TGG | + | chr1.2:58547371-58547390 | None:intergenic | 20.0% |
| !! | GTTTAATAAGTCTTTAAATG+TGG | - | chr1.2:58546149-58546168 | MS.gene066053:intron | 20.0% |
| !! | TAATATTCCTTGTATGTAAA+AGG | + | chr1.2:58547789-58547808 | None:intergenic | 20.0% |
| !! | TGTAAATGTACATTGTTAAT+GGG | - | chr1.2:58546252-58546271 | MS.gene066053:intron | 20.0% |
| !! | TTACATACAAGGAATATTAT+GGG | - | chr1.2:58547790-58547809 | MS.gene066053:intron | 20.0% |
| !! | TTACTTTATGAATCAGATAA+GGG | - | chr1.2:58547378-58547397 | MS.gene066053:intron | 20.0% |
| !! | TTAGCATTTGTATTAACATT+TGG | + | chr1.2:58547566-58547585 | None:intergenic | 20.0% |
| !! | TTCATAAAGTAATAGAAGAT+GGG | + | chr1.2:58547370-58547389 | None:intergenic | 20.0% |
| !! | TTTACATACAAGGAATATTA+TGG | - | chr1.2:58547789-58547808 | MS.gene066053:intron | 20.0% |
| !!! | AGCATTTAGAATAACTTATT+CGG | + | chr1.2:58547602-58547621 | None:intergenic | 20.0% |
| !!! | CACATCAAATATGTTTTAAT+TGG | - | chr1.2:58547001-58547020 | MS.gene066053:intron | 20.0% |
| !!! | TAAGCATTCAAATTTTTCTT+CGG | - | chr1.2:58546726-58546745 | MS.gene066053:intron | 20.0% |
| !!! | TGTCATTTTAATCTTTTTAC+TGG | - | chr1.2:58547186-58547205 | MS.gene066053:intron | 20.0% |
| !!! | TGTTTTTGTTTTCATTTTAG+GGG | - | chr1.2:58546286-58546305 | MS.gene066053:intron | 20.0% |
| !!! | TTTTTATGGATTTTAAACTG+TGG | - | chr1.2:58547959-58547978 | MS.gene066053:CDS | 20.0% |
| ! | AACTCAAAAAACAACTTGTA+AGG | + | chr1.2:58547721-58547740 | None:intergenic | 25.0% |
| ! | AATCAAAGATTTCATGATTC+AGG | - | chr1.2:58546880-58546899 | MS.gene066053:intron | 25.0% |
| ! | AGCGTACTAACAAAATATAA+CGG | + | chr1.2:58546936-58546955 | None:intergenic | 25.0% |
| ! | ATAAGAATTAGATAGTAACC+TGG | + | chr1.2:58545908-58545927 | None:intergenic | 25.0% |
| ! | ATAATTGCATTTGTGAGATT+GGG | + | chr1.2:58548042-58548061 | None:intergenic | 25.0% |
| ! | ATCAAAGATTTCATGATTCA+GGG | - | chr1.2:58546881-58546900 | MS.gene066053:intron | 25.0% |
| ! | CAATTGCTACAATGTTATAT+TGG | - | chr1.2:58548076-58548095 | MS.gene066053:intron | 25.0% |
| ! | CATATTATTAAAACTTGGGT+TGG | + | chr1.2:58547748-58547767 | None:intergenic | 25.0% |
| ! | CCATTAAAAATTACGTGATT+TGG | - | chr1.2:58546471-58546490 | MS.gene066053:intron | 25.0% |
| ! | CTGTAAATGTACATTGTTAA+TGG | - | chr1.2:58546251-58546270 | MS.gene066053:intron | 25.0% |
| ! | TACTTTATGAATCAGATAAG+GGG | - | chr1.2:58547379-58547398 | MS.gene066053:intron | 25.0% |
| ! | TATAATTGCATTTGTGAGAT+TGG | + | chr1.2:58548043-58548062 | None:intergenic | 25.0% |
| ! | TGCAATCAAAGTCAATAAAA+AGG | + | chr1.2:58548163-58548182 | None:intergenic | 25.0% |
| ! | TTGACAATTTAACATCAACA+GGG | - | chr1.2:58548111-58548130 | MS.gene066053:intron | 25.0% |
| ! | TTGACCTACTGAAAAAATAA+AGG | - | chr1.2:58547999-58548018 | MS.gene066053:CDS | 25.0% |
| ! | TTTGACAATTTAACATCAAC+AGG | - | chr1.2:58548110-58548129 | MS.gene066053:intron | 25.0% |
| !! | AAAATTTTGGATAGCCAATT+CGG | - | chr1.2:58546508-58546527 | MS.gene066053:intron | 25.0% |
| !! | AACAATTTTGCATGTTTTCA+AGG | + | chr1.2:58548466-58548485 | None:intergenic | 25.0% |
| !! | ACAATTTTGCATGTTTTCAA+GGG | + | chr1.2:58548465-58548484 | None:intergenic | 25.0% |
| !! | ATTAAGGTGTTTATTCAAAC+AGG | + | chr1.2:58545954-58545973 | None:intergenic | 25.0% |
| !! | ATTGGTTTCATTATCTTACA+TGG | - | chr1.2:58546545-58546564 | MS.gene066053:intron | 25.0% |
| !! | ATTTCGTTTGCAGAAAATTT+TGG | - | chr1.2:58546495-58546514 | MS.gene066053:intron | 25.0% |
| !! | CAGTATTAAAAGTTTTGCTT+TGG | - | chr1.2:58547143-58547162 | MS.gene066053:intron | 25.0% |
| !! | CCAAATCACGTAATTTTTAA+TGG | + | chr1.2:58546474-58546493 | None:intergenic | 25.0% |
| !! | GTTTTCTTTGATGTAGTTAT+TGG | - | chr1.2:58546616-58546635 | MS.gene066053:intron | 25.0% |
| !! | TTAAGGTGTTTATTCAAACA+GGG | + | chr1.2:58545953-58545972 | None:intergenic | 25.0% |
| !!! | AAAAGTACAGACTTTTAGTT+AGG | + | chr1.2:58547943-58547962 | None:intergenic | 25.0% |
| !!! | AATATGTTTTAATTGGATGC+AGG | - | chr1.2:58547008-58547027 | MS.gene066053:CDS | 25.0% |
| !!! | ATATGTTTTAATTGGATGCA+GGG | - | chr1.2:58547009-58547028 | MS.gene066053:CDS | 25.0% |
| !!! | ATTTTTTATTTGCACTGTAC+CGG | - | chr1.2:58547332-58547351 | MS.gene066053:intron | 25.0% |
| !!! | CTAAAAGTCTGTACTTTTTA+TGG | - | chr1.2:58547945-58547964 | MS.gene066053:CDS | 25.0% |
| !!! | CTGGAAATGTATTTTTAAGT+GGG | - | chr1.2:58547683-58547702 | MS.gene066053:CDS | 25.0% |
| !!! | TACAAGTTGTTTTTTGAGTT+AGG | - | chr1.2:58547721-58547740 | MS.gene066053:CDS | 25.0% |
| AAAAAACAACTTGTAAGGTG+AGG | + | chr1.2:58547716-58547735 | None:intergenic | 30.0% | |
| AAAAACAACTTGTAAGGTGA+GGG | + | chr1.2:58547715-58547734 | None:intergenic | 30.0% | |
| ACATATACACATGATGCTAA+GGG | - | chr1.2:58546963-58546982 | MS.gene066053:intron | 30.0% | |
| ACATGCAAAATTGTTAACTC+TGG | - | chr1.2:58548471-58548490 | MS.gene066053:CDS | 30.0% | |
| ATGCTATAAGCTGCAAATTA+AGG | + | chr1.2:58545970-58545989 | None:intergenic | 30.0% | |
| CCACTTAAAAATACATTTCC+AGG | + | chr1.2:58547685-58547704 | None:intergenic | 30.0% | |
| TACATATACACATGATGCTA+AGG | - | chr1.2:58546962-58546981 | MS.gene066053:intron | 30.0% | |
| TGAAATCTTTGATTATGCGA+TGG | + | chr1.2:58546874-58546893 | None:intergenic | 30.0% | |
| TTCTTTGATGTAGTTATTGG+AGG | - | chr1.2:58546619-58546638 | MS.gene066053:intron | 30.0% | |
| TTTGAGAATAATAACTGTGC+AGG | - | chr1.2:58546815-58546834 | MS.gene066053:intron | 30.0% | |
| ! | GCATAAGAATGTGTTACTAA+AGG | - | chr1.2:58546225-58546244 | MS.gene066053:intron | 30.0% |
| ! | TATGAGTATTGTGGTGAAAT+TGG | - | chr1.2:58546763-58546782 | MS.gene066053:intron | 30.0% |
| ! | TTTTCATGTTGTAGACTTCA+TGG | - | chr1.2:58548343-58548362 | MS.gene066053:intron | 30.0% |
| !! | CCTGGAAATGTATTTTTAAG+TGG | - | chr1.2:58547682-58547701 | MS.gene066053:CDS | 30.0% |
| !!! | CAAGCCTTTATTTTTTCAGT+AGG | + | chr1.2:58548006-58548025 | None:intergenic | 30.0% |
| AAAGATTTCATGATTCAGGG+AGG | - | chr1.2:58546884-58546903 | MS.gene066053:intron | 35.0% | |
| AAGATTTCATGATTCAGGGA+GGG | - | chr1.2:58546885-58546904 | MS.gene066053:intron | 35.0% | |
| AAGCGAAATCAATCACTTCT+CGG | - | chr1.2:58546412-58546431 | MS.gene066053:intron | 35.0% | |
| AATTGACTGCCGTTACTATT+AGG | + | chr1.2:58547315-58547334 | None:intergenic | 35.0% | |
| ATCTTTGATTATGCGATGGA+AGG | + | chr1.2:58546870-58546889 | None:intergenic | 35.0% | |
| ATCTTTGTTCTCAACACAGT+TGG | - | chr1.2:58545845-58545864 | MS.gene066053:CDS | 35.0% | |
| ATGACAATTTACTGCATCCA+AGG | + | chr1.2:58546347-58546366 | None:intergenic | 35.0% | |
| GTATTTGGACATGTCATTGA+TGG | - | chr1.2:58548384-58548403 | MS.gene066053:intron | 35.0% | |
| TGACATGTCCAAATACAACA+TGG | + | chr1.2:58548380-58548399 | None:intergenic | 35.0% | |
| TGGTTGAGACGCTAAATATT+AGG | + | chr1.2:58548252-58548271 | None:intergenic | 35.0% | |
| ! | AGGATTGTTATTGGCCTATT+TGG | - | chr1.2:58546655-58546674 | MS.gene066053:intron | 35.0% |
| ! | ATAGGCTGTGTGTTTCATTT+TGG | + | chr1.2:58547900-58547919 | None:intergenic | 35.0% |
| ! | CGGAAATTCTCAACTGTTTT+GGG | + | chr1.2:58546691-58546710 | None:intergenic | 35.0% |
| ! | GAAAACCTTGCTTGTTACTT+TGG | + | chr1.2:58546602-58546621 | None:intergenic | 35.0% |
| ! | GAAGTTCCCTTTTACATACA+AGG | - | chr1.2:58547779-58547798 | MS.gene066053:intron | 35.0% |
| ! | TCGGAAATTCTCAACTGTTT+TGG | + | chr1.2:58546692-58546711 | None:intergenic | 35.0% |
| ! | TCTTTTTACTGGACTGTCAA+TGG | - | chr1.2:58547197-58547216 | MS.gene066053:intron | 35.0% |
| ! | TTGTCGTTGTATGAGTATTG+TGG | - | chr1.2:58546754-58546773 | MS.gene066053:intron | 35.0% |
| AATAACTGTGCAGGAGAGAA+AGG | - | chr1.2:58546824-58546843 | MS.gene066053:intron | 40.0% | |
| AATGCCGGTCCTAATAGTAA+CGG | - | chr1.2:58547303-58547322 | MS.gene066053:CDS | 40.0% | |
| ACGTTAAATGAGATATGGCC+TGG | - | chr1.2:58547664-58547683 | MS.gene066053:CDS | 40.0% | |
| AGATGGGAAAATAGTCTCAC+CGG | + | chr1.2:58547354-58547373 | None:intergenic | 40.0% | |
| AGATTTCATGATTCAGGGAG+GGG | - | chr1.2:58546886-58546905 | MS.gene066053:intron | 40.0% | |
| AGGCCATATCTCATTTAACG+TGG | + | chr1.2:58547665-58547684 | None:intergenic | 40.0% | |
| CATGTTGTAGACTTCATGGT+TGG | - | chr1.2:58548347-58548366 | MS.gene066053:intron | 40.0% | |
| GACAATCGCCATGTTGTATT+TGG | - | chr1.2:58548369-58548388 | MS.gene066053:intron | 40.0% | |
| GGATGCAGTAAATTGTCATC+AGG | - | chr1.2:58546348-58546367 | MS.gene066053:intron | 40.0% | |
| GGCCATATCTCATTTAACGT+GGG | + | chr1.2:58547664-58547683 | None:intergenic | 40.0% | |
| GTCATCAGGATATCATTACG+CGG | - | chr1.2:58546362-58546381 | MS.gene066053:intron | 40.0% | |
| GTCCCACGTTAAATGAGATA+TGG | - | chr1.2:58547659-58547678 | MS.gene066053:CDS | 40.0% | |
| TCGGCTGTGATTCAAAACAT+TGG | - | chr1.2:58546527-58546546 | MS.gene066053:intron | 40.0% | |
| TCTGCTGGAAGGATTGTTAT+TGG | - | chr1.2:58546646-58546665 | MS.gene066053:intron | 40.0% | |
| TGGACATGTCATTGATGGAA+TGG | - | chr1.2:58548389-58548408 | MS.gene066053:intron | 40.0% | |
| TGGGAACAACATCTCCAAAT+AGG | + | chr1.2:58546672-58546691 | None:intergenic | 40.0% | |
| TTGATGGAATGGATGTTGTG+AGG | - | chr1.2:58548400-58548419 | MS.gene066053:intron | 40.0% | |
| TTTAATTGGATGCAGGGAAC+TGG | - | chr1.2:58547015-58547034 | MS.gene066053:CDS | 40.0% | |
| TTTGATTATGCGATGGAAGG+TGG | + | chr1.2:58546867-58546886 | None:intergenic | 40.0% | |
| ! | CAGCATTGAAACCAGAAAGA+AGG | + | chr1.2:58545884-58545903 | None:intergenic | 40.0% |
| !! | GTTTTGAATCACAGCCGAAT+TGG | + | chr1.2:58546525-58546544 | None:intergenic | 40.0% |
| !! | TACATGGCTGTGTTACTTCT+AGG | - | chr1.2:58546561-58546580 | MS.gene066053:intron | 40.0% |
| AAGGGGAATCCTTCTGTGTT+TGG | - | chr1.2:58547396-58547415 | MS.gene066053:intron | 45.0% | |
| ACTGCCGTTACTATTAGGAC+CGG | + | chr1.2:58547310-58547329 | None:intergenic | 45.0% | |
| ACTGGTGGAGTCAGTATCTA+TGG | - | chr1.2:58547033-58547052 | MS.gene066053:CDS | 45.0% | |
| AGGGGAATCCTTCTGTGTTT+GGG | - | chr1.2:58547397-58547416 | MS.gene066053:intron | 45.0% | |
| CAGAGTCAGAACCTTCTTTC+TGG | - | chr1.2:58545870-58545889 | MS.gene066053:CDS | 45.0% | |
| CCTGTTTACCCAAACACAGA+AGG | + | chr1.2:58547408-58547427 | None:intergenic | 45.0% | |
| CCTTCTGTGTTTGGGTAAAC+AGG | - | chr1.2:58547405-58547424 | MS.gene066053:intron | 45.0% | |
| GAGACAAGCAGCTACAACAA+TGG | - | chr1.2:58548438-58548457 | MS.gene066053:intron | 45.0% | |
| GCAAGCCAAAGTAACAAGCA+AGG | - | chr1.2:58546594-58546613 | MS.gene066053:intron | 45.0% | |
| GTTATTGGAGGTGAATCTGC+TGG | - | chr1.2:58546631-58546650 | MS.gene066053:intron | 45.0% | |
| TCTGGAGAACTTCCTCTAGA+TGG | - | chr1.2:58548489-58548508 | MS.gene066053:CDS | 45.0% | |
| TGTGAGGACACTTGAATCAC+AGG | - | chr1.2:58548416-58548435 | MS.gene066053:intron | 45.0% | |
| TGTGCAGGAGAGAAAGGATA+TGG | - | chr1.2:58546830-58546849 | MS.gene066053:intron | 45.0% | |
| TTCCTTGCAGTGAAGCATGT+TGG | - | chr1.2:58547258-58547277 | MS.gene066053:intron | 45.0% | |
| TTTGCCATGCTCAAAACTCC+AGG | + | chr1.2:58547285-58547304 | None:intergenic | 45.0% | |
| ! | AATTTCCGAGCTTTGTGCAC+AGG | - | chr1.2:58546703-58546722 | MS.gene066053:intron | 45.0% |
| !! | GTTTTGAGCATGGCAAATGC+CGG | - | chr1.2:58547288-58547307 | MS.gene066053:CDS | 45.0% |
| !! | TTCTGGTTTCAATGCTGTCC+AGG | - | chr1.2:58545887-58545906 | MS.gene066053:CDS | 45.0% |
| AATTGGATGCAGGGAACTGG+TGG | - | chr1.2:58547018-58547037 | MS.gene066053:CDS | 50.0% | |
| CAGGATATCATTACGCGGCT+AGG | - | chr1.2:58546367-58546386 | MS.gene066053:intron | 50.0% | |
| GACCAACATGCTTCACTGCA+AGG | + | chr1.2:58547263-58547282 | None:intergenic | 50.0% | |
| GCTTACCTGTGCACAAAGCT+CGG | + | chr1.2:58546711-58546730 | None:intergenic | 50.0% | |
| GGTGGAGTCAGTATCTATGG+TGG | - | chr1.2:58547036-58547055 | MS.gene066053:CDS | 50.0% | |
| TCATTACGCGGCTAGGCTTT+CGG | - | chr1.2:58546374-58546393 | MS.gene066053:intron | 50.0% | |
| TTGGAGGTGAATCTGCTGGA+AGG | - | chr1.2:58546635-58546654 | MS.gene066053:intron | 50.0% | |
| !!! | TGGTCCTGGAGTTTTGAGCA+TGG | - | chr1.2:58547278-58547297 | MS.gene066053:CDS | 50.0% |
| ACTGCATCCAAGGTGTGCTC+TGG | + | chr1.2:58546337-58546356 | None:intergenic | 55.0% | |
| AGCAGTACCAGAGCACACCT+TGG | - | chr1.2:58546327-58546346 | MS.gene066053:intron | 55.0% | |
| GCAGTGAAGCATGTTGGTCC+TGG | - | chr1.2:58547264-58547283 | MS.gene066053:intron | 55.0% | |
| CAGGGAGGGGACTTCACAGA+AGG | - | chr1.2:58546899-58546918 | MS.gene066053:intron | 60.0% | |
| GTGTGTGCGCGCGCACGTGC+TGG | + | chr1.2:58548272-58548291 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 58545840 | 58548515 | 58545840 | ID=MS.gene066053 |
| chr1.2 | mRNA | 58545840 | 58548515 | 58545840 | ID=MS.gene066053.t1;Parent=MS.gene066053 |
| chr1.2 | exon | 58548447 | 58548515 | 58548447 | ID=MS.gene066053.t1.exon1;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58548447 | 58548515 | 58548447 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58547894 | 58548049 | 58547894 | ID=MS.gene066053.t1.exon2;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58547894 | 58548049 | 58547894 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58547631 | 58547772 | 58547631 | ID=MS.gene066053.t1.exon3;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58547631 | 58547772 | 58547631 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58547430 | 58547518 | 58547430 | ID=MS.gene066053.t1.exon4;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58547430 | 58547518 | 58547430 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58547271 | 58547325 | 58547271 | ID=MS.gene066053.t1.exon5;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58547271 | 58547325 | 58547271 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58547002 | 58547087 | 58547002 | ID=MS.gene066053.t1.exon6;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58547002 | 58547087 | 58547002 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| chr1.2 | exon | 58545840 | 58545998 | 58545840 | ID=MS.gene066053.t1.exon7;Parent=MS.gene066053.t1 |
| chr1.2 | CDS | 58545840 | 58545998 | 58545840 | ID=cds.MS.gene066053.t1;Parent=MS.gene066053.t1 |
| Gene Sequence |
| Protein sequence |
