Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072571.t1 | XP_013450440.1 | 96 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 7.20E-129 | 469.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072571.t1 | O23403 | 71.4 | 217 | 57 | 3 | 35 | 247 | 72 | 287 | 1.6e-81 | 303.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072571.t1 | A0A072U5R2 | 96.0 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 5.2e-129 | 469.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene072571 | 0.801564 | 8.48E-49 | -1.69E-46 |
MS.gene049285 | MS.gene072571 | 0.803644 | 3.16E-49 | -1.69E-46 |
MS.gene049351 | MS.gene072571 | 0.817633 | 2.98E-52 | -1.69E-46 |
MS.gene049427 | MS.gene072571 | 0.867061 | 1.81E-65 | -1.69E-46 |
MS.gene049491 | MS.gene072571 | 0.850091 | 2.12E-60 | -1.69E-46 |
MS.gene049614 | MS.gene072571 | 0.859065 | 5.35E-63 | -1.69E-46 |
MS.gene049661 | MS.gene072571 | 0.840161 | 1.03E-57 | -1.69E-46 |
MS.gene049662 | MS.gene072571 | 0.833572 | 4.94E-56 | -1.69E-46 |
MS.gene049760 | MS.gene072571 | 0.819275 | 1.26E-52 | -1.69E-46 |
MS.gene049805 | MS.gene072571 | 0.811825 | 5.77E-51 | -1.69E-46 |
MS.gene049828 | MS.gene072571 | 0.800913 | 1.15E-48 | -1.69E-46 |
MS.gene050076 | MS.gene072571 | 0.874335 | 7.32E-68 | -1.69E-46 |
MS.gene050099 | MS.gene072571 | 0.808453 | 3.07E-50 | -1.69E-46 |
MS.gene050163 | MS.gene072571 | 0.833553 | 4.99E-56 | -1.69E-46 |
MS.gene050165 | MS.gene072571 | 0.80579 | 1.13E-49 | -1.69E-46 |
MS.gene050301 | MS.gene072571 | 0.83969 | 1.36E-57 | -1.69E-46 |
MS.gene050333 | MS.gene072571 | 0.816244 | 6.11E-52 | -1.69E-46 |
MS.gene050432 | MS.gene072571 | 0.867172 | 1.66E-65 | -1.69E-46 |
MS.gene05053 | MS.gene072571 | 0.809903 | 1.50E-50 | -1.69E-46 |
MS.gene050581 | MS.gene072571 | 0.810279 | 1.25E-50 | -1.69E-46 |
MS.gene050593 | MS.gene072571 | 0.802531 | 5.37E-49 | -1.69E-46 |
MS.gene050767 | MS.gene072571 | 0.973608 | 1.02E-136 | -1.69E-46 |
MS.gene050770 | MS.gene072571 | 0.972747 | 2.84E-135 | -1.69E-46 |
MS.gene050772 | MS.gene072571 | 0.817484 | 3.22E-52 | -1.69E-46 |
MS.gene050783 | MS.gene072571 | 0.846875 | 1.65E-59 | -1.69E-46 |
MS.gene05100 | MS.gene072571 | 0.818229 | 2.19E-52 | -1.69E-46 |
MS.gene05101 | MS.gene072571 | 0.90258 | 8.38E-79 | -1.69E-46 |
MS.gene05105 | MS.gene072571 | 0.815307 | 9.89E-52 | -1.69E-46 |
MS.gene051228 | MS.gene072571 | 0.855716 | 5.23E-62 | -1.69E-46 |
MS.gene051387 | MS.gene072571 | 0.800647 | 1.31E-48 | -1.69E-46 |
MS.gene051471 | MS.gene072571 | 0.851505 | 8.49E-61 | -1.69E-46 |
MS.gene051692 | MS.gene072571 | 0.800773 | 1.23E-48 | -1.69E-46 |
MS.gene051810 | MS.gene072571 | 0.81752 | 3.16E-52 | -1.69E-46 |
MS.gene051877 | MS.gene072571 | 0.823019 | 1.73E-53 | -1.69E-46 |
MS.gene052078 | MS.gene072571 | 0.857885 | 1.20E-62 | -1.69E-46 |
MS.gene052271 | MS.gene072571 | 0.882609 | 9.03E-71 | -1.69E-46 |
MS.gene052290 | MS.gene072571 | 0.869393 | 3.20E-66 | -1.69E-46 |
MS.gene052293 | MS.gene072571 | 0.814061 | 1.87E-51 | -1.69E-46 |
MS.gene052310 | MS.gene072571 | 0.861709 | 8.48E-64 | -1.69E-46 |
MS.gene052322 | MS.gene072571 | 0.813643 | 2.31E-51 | -1.69E-46 |
MS.gene052326 | MS.gene072571 | 0.881978 | 1.53E-70 | -1.69E-46 |
MS.gene052379 | MS.gene072571 | 0.845487 | 3.94E-59 | -1.69E-46 |
MS.gene052421 | MS.gene072571 | 0.807818 | 4.20E-50 | -1.69E-46 |
MS.gene052484 | MS.gene072571 | 0.801579 | 8.42E-49 | -1.69E-46 |
MS.gene052510 | MS.gene072571 | 0.800725 | 1.26E-48 | -1.69E-46 |
MS.gene053009 | MS.gene072571 | 0.850312 | 1.84E-60 | -1.69E-46 |
MS.gene053103 | MS.gene072571 | 0.812518 | 4.07E-51 | -1.69E-46 |
MS.gene053104 | MS.gene072571 | 0.81996 | 8.83E-53 | -1.69E-46 |
MS.gene053107 | MS.gene072571 | 0.803178 | 3.95E-49 | -1.69E-46 |
MS.gene053209 | MS.gene072571 | 0.817925 | 2.56E-52 | -1.69E-46 |
MS.gene053213 | MS.gene072571 | 0.827774 | 1.30E-54 | -1.69E-46 |
MS.gene053286 | MS.gene072571 | 0.818327 | 2.08E-52 | -1.69E-46 |
MS.gene053322 | MS.gene072571 | 0.888803 | 4.27E-73 | -1.69E-46 |
MS.gene053384 | MS.gene072571 | 0.809915 | 1.49E-50 | -1.69E-46 |
MS.gene053813 | MS.gene072571 | 0.825311 | 5.02E-54 | -1.69E-46 |
MS.gene054123 | MS.gene072571 | 0.817365 | 3.42E-52 | -1.69E-46 |
MS.gene054376 | MS.gene072571 | 0.999717 | 0.00E+00 | -1.69E-46 |
MS.gene05455 | MS.gene072571 | 0.826918 | 2.08E-54 | -1.69E-46 |
MS.gene054642 | MS.gene072571 | 0.835022 | 2.14E-56 | -1.69E-46 |
MS.gene054802 | MS.gene072571 | 0.908221 | 2.17E-81 | -1.69E-46 |
MS.gene054803 | MS.gene072571 | 0.910685 | 1.42E-82 | -1.69E-46 |
MS.gene054804 | MS.gene072571 | 0.912721 | 1.41E-83 | -1.69E-46 |
MS.gene05505 | MS.gene072571 | 0.815419 | 9.33E-52 | -1.69E-46 |
MS.gene055116 | MS.gene072571 | 0.813117 | 3.01E-51 | -1.69E-46 |
MS.gene055254 | MS.gene072571 | 0.895237 | 1.16E-75 | -1.69E-46 |
MS.gene055277 | MS.gene072571 | 0.880272 | 6.29E-70 | -1.69E-46 |
MS.gene055390 | MS.gene072571 | 0.836201 | 1.07E-56 | -1.69E-46 |
MS.gene055397 | MS.gene072571 | 0.910781 | 1.27E-82 | -1.69E-46 |
MS.gene055412 | MS.gene072571 | 0.817375 | 3.41E-52 | -1.69E-46 |
MS.gene055422 | MS.gene072571 | 0.833638 | 4.75E-56 | -1.69E-46 |
MS.gene055428 | MS.gene072571 | 0.831292 | 1.81E-55 | -1.69E-46 |
MS.gene055497 | MS.gene072571 | -0.813842 | 2.09E-51 | -1.69E-46 |
MS.gene055499 | MS.gene072571 | 0.912742 | 1.37E-83 | -1.69E-46 |
MS.gene055636 | MS.gene072571 | 0.82238 | 2.44E-53 | -1.69E-46 |
MS.gene055638 | MS.gene072571 | 0.80161 | 8.30E-49 | -1.69E-46 |
MS.gene055647 | MS.gene072571 | 0.878651 | 2.36E-69 | -1.69E-46 |
MS.gene055722 | MS.gene072571 | 0.821655 | 3.60E-53 | -1.69E-46 |
MS.gene055896 | MS.gene072571 | 0.850734 | 1.40E-60 | -1.69E-46 |
MS.gene05592 | MS.gene072571 | 0.865308 | 6.49E-65 | -1.69E-46 |
MS.gene055930 | MS.gene072571 | 0.81646 | 5.47E-52 | -1.69E-46 |
MS.gene056083 | MS.gene072571 | 0.827346 | 1.65E-54 | -1.69E-46 |
MS.gene056191 | MS.gene072571 | 0.823144 | 1.62E-53 | -1.69E-46 |
MS.gene056374 | MS.gene072571 | 0.830547 | 2.76E-55 | -1.69E-46 |
MS.gene056407 | MS.gene072571 | 0.815221 | 1.03E-51 | -1.69E-46 |
MS.gene056410 | MS.gene072571 | 0.836828 | 7.44E-57 | -1.69E-46 |
MS.gene056452 | MS.gene072571 | 0.803202 | 3.90E-49 | -1.69E-46 |
MS.gene056609 | MS.gene072571 | 0.850351 | 1.80E-60 | -1.69E-46 |
MS.gene056612 | MS.gene072571 | 0.810575 | 1.08E-50 | -1.69E-46 |
MS.gene056657 | MS.gene072571 | 0.808183 | 3.51E-50 | -1.69E-46 |
MS.gene056897 | MS.gene072571 | 0.804798 | 1.82E-49 | -1.69E-46 |
MS.gene057011 | MS.gene072571 | 0.84817 | 7.27E-60 | -1.69E-46 |
MS.gene05702 | MS.gene072571 | 0.831853 | 1.32E-55 | -1.69E-46 |
MS.gene057123 | MS.gene072571 | 0.833418 | 5.40E-56 | -1.69E-46 |
MS.gene057129 | MS.gene072571 | 0.90354 | 3.12E-79 | -1.69E-46 |
MS.gene057146 | MS.gene072571 | 0.831721 | 1.42E-55 | -1.69E-46 |
MS.gene057246 | MS.gene072571 | 0.801249 | 9.84E-49 | -1.69E-46 |
MS.gene057295 | MS.gene072571 | 0.869639 | 2.66E-66 | -1.69E-46 |
MS.gene057331 | MS.gene072571 | 0.840891 | 6.62E-58 | -1.69E-46 |
MS.gene05733 | MS.gene072571 | 0.801138 | 1.04E-48 | -1.69E-46 |
MS.gene057416 | MS.gene072571 | 0.855275 | 7.04E-62 | -1.69E-46 |
MS.gene058019 | MS.gene072571 | 0.853128 | 2.93E-61 | -1.69E-46 |
MS.gene058082 | MS.gene072571 | 0.80535 | 1.39E-49 | -1.69E-46 |
MS.gene058233 | MS.gene072571 | 0.812606 | 3.90E-51 | -1.69E-46 |
MS.gene058293 | MS.gene072571 | 0.872074 | 4.20E-67 | -1.69E-46 |
MS.gene058323 | MS.gene072571 | 0.834169 | 3.50E-56 | -1.69E-46 |
MS.gene058660 | MS.gene072571 | 0.887447 | 1.42E-72 | -1.69E-46 |
MS.gene058787 | MS.gene072571 | 0.823864 | 1.10E-53 | -1.69E-46 |
MS.gene058903 | MS.gene072571 | 0.83637 | 9.74E-57 | -1.69E-46 |
MS.gene058993 | MS.gene072571 | 0.810207 | 1.29E-50 | -1.69E-46 |
MS.gene059029 | MS.gene072571 | 0.819799 | 9.61E-53 | -1.69E-46 |
MS.gene05907 | MS.gene072571 | 0.804581 | 2.02E-49 | -1.69E-46 |
MS.gene059228 | MS.gene072571 | 0.805715 | 1.17E-49 | -1.69E-46 |
MS.gene059326 | MS.gene072571 | 0.855652 | 5.46E-62 | -1.69E-46 |
MS.gene059518 | MS.gene072571 | 0.801879 | 7.31E-49 | -1.69E-46 |
MS.gene059536 | MS.gene072571 | 0.863289 | 2.77E-64 | -1.69E-46 |
MS.gene059597 | MS.gene072571 | 0.82169 | 3.53E-53 | -1.69E-46 |
MS.gene05959 | MS.gene072571 | 0.811299 | 7.50E-51 | -1.69E-46 |
MS.gene059676 | MS.gene072571 | 0.848543 | 5.73E-60 | -1.69E-46 |
MS.gene059688 | MS.gene072571 | 0.83583 | 1.34E-56 | -1.69E-46 |
MS.gene059692 | MS.gene072571 | 0.848352 | 6.47E-60 | -1.69E-46 |
MS.gene059695 | MS.gene072571 | 0.854343 | 1.31E-61 | -1.69E-46 |
MS.gene059711 | MS.gene072571 | 0.808403 | 3.15E-50 | -1.69E-46 |
MS.gene059858 | MS.gene072571 | 0.835714 | 1.43E-56 | -1.69E-46 |
MS.gene059894 | MS.gene072571 | 0.811245 | 7.71E-51 | -1.69E-46 |
MS.gene059960 | MS.gene072571 | 0.909872 | 3.52E-82 | -1.69E-46 |
MS.gene059974 | MS.gene072571 | 0.827443 | 1.56E-54 | -1.69E-46 |
MS.gene060005 | MS.gene072571 | 0.848195 | 7.15E-60 | -1.69E-46 |
MS.gene060193 | MS.gene072571 | 0.816375 | 5.71E-52 | -1.69E-46 |
MS.gene060356 | MS.gene072571 | 0.808772 | 2.63E-50 | -1.69E-46 |
MS.gene06037 | MS.gene072571 | 0.84417 | 8.92E-59 | -1.69E-46 |
MS.gene060804 | MS.gene072571 | 0.855991 | 4.35E-62 | -1.69E-46 |
MS.gene060818 | MS.gene072571 | 0.833387 | 5.49E-56 | -1.69E-46 |
MS.gene061041 | MS.gene072571 | 0.818861 | 1.57E-52 | -1.69E-46 |
MS.gene061049 | MS.gene072571 | 0.812542 | 4.02E-51 | -1.69E-46 |
MS.gene061051 | MS.gene072571 | -0.822161 | 2.75E-53 | -1.69E-46 |
MS.gene061150 | MS.gene072571 | 0.819778 | 9.71E-53 | -1.69E-46 |
MS.gene061200 | MS.gene072571 | 0.911769 | 4.18E-83 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072571.t1 | MTR_7g111880 | 96.000 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 3.30e-172 | 474 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072571.t1 | AT4G15510 | 64.659 | 249 | 76 | 5 | 10 | 247 | 40 | 287 | 4.09e-105 | 306 |
MS.gene072571.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072571.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072571.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene072571.t1 | AT4G15510 | 69.595 | 148 | 40 | 3 | 35 | 178 | 72 | 218 | 1.67e-62 | 196 |
Find 0 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCTTGATGAAAATATAT+CGG | + | 51773:3763-3782 | MS.gene072571:CDS | 15.0% |
!!! | ATATTTTCATCAAGAATATA+AGG | - | 51773:3761-3780 | None:intergenic | 15.0% |
!! | AAATAAAATAATTGTGACAG+AGG | - | 51773:3489-3508 | None:intergenic | 20.0% |
!! | TACATTTATCAGAAAAATTG+TGG | + | 51773:3990-4009 | MS.gene072571:intron | 20.0% |
! | GAATATGTTGATACATTTGA+TGG | + | 51773:3665-3684 | MS.gene072571:CDS | 25.0% |
AAAACTTACGGTAATTTGAG+GGG | + | 51773:4038-4057 | MS.gene072571:intron | 30.0% | |
AGAAAATGTGTTTCAAGAAG+AGG | + | 51773:4307-4326 | MS.gene072571:CDS | 30.0% | |
CAAAACTTACGGTAATTTGA+GGG | + | 51773:4037-4056 | MS.gene072571:intron | 30.0% | |
CATTCAACTATCCATCAAAT+TGG | + | 51773:3693-3712 | MS.gene072571:CDS | 30.0% | |
CTTACTTGAATCCAATTTGA+TGG | - | 51773:3707-3726 | None:intergenic | 30.0% | |
TCAAATTGGATTCAAGTAAG+AGG | + | 51773:3707-3726 | MS.gene072571:CDS | 30.0% | |
! | CAAATTGTACTATCAAGTTG+AGG | + | 51773:3961-3980 | MS.gene072571:CDS | 30.0% |
! | TCTTCTTGAAACACATTTTC+TGG | - | 51773:4308-4327 | None:intergenic | 30.0% |
!! | AATGACATTGCTTTTCTTCT+AGG | - | 51773:3578-3597 | None:intergenic | 30.0% |
ATGGATGGAATTTACCGAAT+TGG | - | 51773:3452-3471 | None:intergenic | 35.0% | |
ATTCAAGACTGTTCAAGACT+TGG | + | 51773:3814-3833 | MS.gene072571:CDS | 35.0% | |
CTCTGTTCTTGCAAAACTTA+CGG | + | 51773:4026-4045 | MS.gene072571:intron | 35.0% | |
GCAAAACTTACGGTAATTTG+AGG | + | 51773:4036-4055 | MS.gene072571:intron | 35.0% | |
GTAATCTCAACTCATACAGT+TGG | - | 51773:4280-4299 | None:intergenic | 35.0% | |
GTCTTGAATTTCGAAGAAGA+AGG | - | 51773:3803-3822 | None:intergenic | 35.0% | |
TGGATGGAATTTACCGAATT+GGG | - | 51773:3451-3470 | None:intergenic | 35.0% | |
TTACTGAGTTTATGTCCACT+AGG | + | 51773:3879-3898 | MS.gene072571:CDS | 35.0% | |
TTCAAGACTGTTCAAGACTT+GGG | + | 51773:3815-3834 | MS.gene072571:CDS | 35.0% | |
!!! | TGGTGCTGATATTTTCTTCA+GGG | + | 51773:3733-3752 | MS.gene072571:CDS | 35.0% |
!!! | TTTGAGGGGTGTCTTTTATA+TGG | + | 51773:4052-4071 | MS.gene072571:intron | 35.0% |
ACATATTCACGAAACACACG+AGG | - | 51773:3653-3672 | None:intergenic | 40.0% | |
ACCCGTTGTTGTGATTGTAT+TGG | - | 51773:3365-3384 | None:intergenic | 40.0% | |
ACTTACATTCTCTCCGACAT+TGG | + | 51773:3608-3627 | MS.gene072571:CDS | 40.0% | |
AGAGGAGAAAGCTCATGAAA+TGG | - | 51773:3471-3490 | None:intergenic | 40.0% | |
ATGGAAGTGAAATGGTGACA+TGG | - | 51773:3401-3420 | None:intergenic | 40.0% | |
GAATTTACCGAATTGGGTGT+GGG | - | 51773:3445-3464 | None:intergenic | 40.0% | |
GAGAAAGCTCATGAAATGGA+TGG | - | 51773:3467-3486 | None:intergenic | 40.0% | |
GCCAATACAATCACAACAAC+GGG | + | 51773:3361-3380 | MS.gene072571:CDS | 40.0% | |
GGCCAATACAATCACAACAA+CGG | + | 51773:3360-3379 | MS.gene072571:CDS | 40.0% | |
TGCTAATGCTGTACCAATGT+CGG | - | 51773:3624-3643 | None:intergenic | 40.0% | |
TGCTGTTATGCCACAAGATA+GGG | + | 51773:4199-4218 | MS.gene072571:CDS | 40.0% | |
TGGAAGTGAAATGGTGACAT+GGG | - | 51773:3400-3419 | None:intergenic | 40.0% | |
TTTCAACTCCTAGAACAGAC+AGG | - | 51773:4253-4272 | None:intergenic | 40.0% | |
! | TTGCTGTTATGCCACAAGAT+AGG | + | 51773:4198-4217 | MS.gene072571:CDS | 40.0% |
!! | TGTGTGTTGTTTGTGTTGCT+AGG | + | 51773:4142-4161 | MS.gene072571:intron | 40.0% |
!!! | CTGGTGCTGATATTTTCTTC+AGG | + | 51773:3732-3751 | MS.gene072571:CDS | 40.0% |
ACGTTTAACACCAAGCCTAG+TGG | - | 51773:3897-3916 | None:intergenic | 45.0% | |
AGTGAAATGGTGACATGGGT+CGG | - | 51773:3396-3415 | None:intergenic | 45.0% | |
ATCATCAGCAACTCTCTCAG+AGG | - | 51773:3939-3958 | None:intergenic | 45.0% | |
CATTTCTCCCACACCCAATT+CGG | + | 51773:3435-3454 | MS.gene072571:CDS | 45.0% | |
GAGTGAACTTCGTCAAGTCA+TGG | + | 51773:4331-4350 | MS.gene072571:CDS | 45.0% | |
GAGTTTATGTCCACTAGGCT+TGG | + | 51773:3884-3903 | MS.gene072571:CDS | 45.0% | |
GGAATTTACCGAATTGGGTG+TGG | - | 51773:3446-3465 | None:intergenic | 45.0% | |
GGCTTCGTTTCGAGCAAATA+AGG | + | 51773:4352-4371 | MS.gene072571:CDS | 45.0% | |
TCTGAGAGAGTTGCTGATGA+TGG | + | 51773:3938-3957 | MS.gene072571:CDS | 45.0% | |
TGTTATGCCACAAGATAGGG+TGG | + | 51773:4202-4221 | MS.gene072571:CDS | 45.0% | |
! | TGGATTCAAGTAAGAGGTGC+TGG | + | 51773:3713-3732 | MS.gene072571:CDS | 45.0% |
!! | ACTTTCTTCCCAGCTTGTTG+AGG | - | 51773:3845-3864 | None:intergenic | 45.0% |
AAACGCACCACCCTATCTTG+TGG | - | 51773:4212-4231 | None:intergenic | 50.0% | |
ACAAGATAGGGTGGTGCGTT+TGG | + | 51773:4211-4230 | MS.gene072571:CDS | 50.0% | |
ATAGGGTGGTGCGTTTGGAA+TGG | + | 51773:4216-4235 | MS.gene072571:CDS | 50.0% | |
ATCAGCAACTCTCTCAGAGG+TGG | - | 51773:3936-3955 | None:intergenic | 50.0% | |
CGAATTGGGTGTGGGAGAAA+TGG | - | 51773:3437-3456 | None:intergenic | 50.0% | |
CGAGGGGAATGGAAGTGAAA+TGG | - | 51773:3409-3428 | None:intergenic | 50.0% | |
GTGAAATGGTGACATGGGTC+GGG | - | 51773:3395-3414 | None:intergenic | 50.0% | |
! | TAGGGTGGTGCGTTTGGAAT+GGG | + | 51773:4217-4236 | MS.gene072571:CDS | 50.0% |
! | TGCGTTTGGAATGGGATAGG+AGG | + | 51773:4225-4244 | MS.gene072571:CDS | 50.0% |
! | TGGTGCGTTTGGAATGGGAT+AGG | + | 51773:4222-4241 | MS.gene072571:CDS | 50.0% |
!! | AGGAGGTACCTGTCTGTTCT+AGG | + | 51773:4242-4261 | MS.gene072571:CDS | 50.0% |
AAATGGAGCAGCGAGGGGAA+TGG | - | 51773:3420-3439 | None:intergenic | 55.0% | |
TGGGAGAAATGGAGCAGCGA+GGG | - | 51773:3426-3445 | None:intergenic | 55.0% | |
TGGGTTCGCCTCAACAAGCT+GGG | + | 51773:3834-3853 | MS.gene072571:CDS | 55.0% | |
TTGGGTTCGCCTCAACAAGC+TGG | + | 51773:3833-3852 | MS.gene072571:CDS | 55.0% | |
GGGAGAAATGGAGCAGCGAG+GGG | - | 51773:3425-3444 | None:intergenic | 60.0% | |
GTGGGAGAAATGGAGCAGCG+AGG | - | 51773:3427-3446 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51773 | gene | 3358 | 4385 | 3358 | ID=MS.gene072571 |
51773 | mRNA | 3358 | 4385 | 3358 | ID=MS.gene072571.t1;Parent=MS.gene072571 |
51773 | exon | 3358 | 3456 | 3358 | ID=MS.gene072571.t1.exon1;Parent=MS.gene072571.t1 |
51773 | CDS | 3358 | 3456 | 3358 | ID=cds.MS.gene072571.t1;Parent=MS.gene072571.t1 |
51773 | exon | 3554 | 3982 | 3554 | ID=MS.gene072571.t1.exon2;Parent=MS.gene072571.t1 |
51773 | CDS | 3554 | 3982 | 3554 | ID=cds.MS.gene072571.t1;Parent=MS.gene072571.t1 |
51773 | exon | 4164 | 4385 | 4164 | ID=MS.gene072571.t1.exon3;Parent=MS.gene072571.t1 |
51773 | CDS | 4164 | 4385 | 4164 | ID=cds.MS.gene072571.t1;Parent=MS.gene072571.t1 |
Gene Sequence |
Protein sequence |