Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23141.t1 | XP_013450440.1 | 96 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 7.20E-129 | 469.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23141.t1 | O23403 | 71.4 | 217 | 57 | 3 | 35 | 247 | 72 | 287 | 1.6e-81 | 303.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23141.t1 | A0A072U5R2 | 96.0 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 5.2e-129 | 469.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049173 | MS.gene23141 | 0.806822 | 6.83E-50 | -1.69E-46 |
MS.gene049217 | MS.gene23141 | 0.823412 | 1.40E-53 | -1.69E-46 |
MS.gene049285 | MS.gene23141 | 0.832498 | 9.14E-56 | -1.69E-46 |
MS.gene049320 | MS.gene23141 | 0.82388 | 1.09E-53 | -1.69E-46 |
MS.gene049351 | MS.gene23141 | 0.818651 | 1.75E-52 | -1.69E-46 |
MS.gene049369 | MS.gene23141 | 0.805035 | 1.62E-49 | -1.69E-46 |
MS.gene049427 | MS.gene23141 | 0.862651 | 4.36E-64 | -1.69E-46 |
MS.gene049491 | MS.gene23141 | 0.832067 | 1.17E-55 | -1.69E-46 |
MS.gene049614 | MS.gene23141 | 0.886859 | 2.37E-72 | -1.69E-46 |
MS.gene049661 | MS.gene23141 | 0.832185 | 1.09E-55 | -1.69E-46 |
MS.gene049662 | MS.gene23141 | 0.825723 | 4.01E-54 | -1.69E-46 |
MS.gene049760 | MS.gene23141 | 0.8181 | 2.34E-52 | -1.69E-46 |
MS.gene049805 | MS.gene23141 | 0.828187 | 1.03E-54 | -1.69E-46 |
MS.gene049828 | MS.gene23141 | 0.823234 | 1.55E-53 | -1.69E-46 |
MS.gene050076 | MS.gene23141 | 0.862774 | 3.99E-64 | -1.69E-46 |
MS.gene050163 | MS.gene23141 | 0.854976 | 8.60E-62 | -1.69E-46 |
MS.gene050165 | MS.gene23141 | 0.831083 | 2.04E-55 | -1.69E-46 |
MS.gene050301 | MS.gene23141 | 0.821333 | 4.27E-53 | -1.69E-46 |
MS.gene050333 | MS.gene23141 | 0.85241 | 4.70E-61 | -1.69E-46 |
MS.gene050432 | MS.gene23141 | 0.86242 | 5.13E-64 | -1.69E-46 |
MS.gene05053 | MS.gene23141 | 0.802741 | 4.86E-49 | -1.69E-46 |
MS.gene050581 | MS.gene23141 | 0.81683 | 4.52E-52 | -1.69E-46 |
MS.gene050767 | MS.gene23141 | 0.999382 | 2.62E-307 | -1.69E-46 |
MS.gene050770 | MS.gene23141 | 0.99883 | 3.04E-278 | -1.69E-46 |
MS.gene050772 | MS.gene23141 | 0.835227 | 1.90E-56 | -1.69E-46 |
MS.gene050783 | MS.gene23141 | 0.82589 | 3.66E-54 | -1.69E-46 |
MS.gene05100 | MS.gene23141 | 0.8454 | 4.16E-59 | -1.69E-46 |
MS.gene05101 | MS.gene23141 | 0.880643 | 4.64E-70 | -1.69E-46 |
MS.gene05105 | MS.gene23141 | 0.81425 | 1.69E-51 | -1.69E-46 |
MS.gene051228 | MS.gene23141 | 0.881263 | 2.78E-70 | -1.69E-46 |
MS.gene051434 | MS.gene23141 | 0.807327 | 5.34E-50 | -1.69E-46 |
MS.gene051471 | MS.gene23141 | 0.847661 | 1.00E-59 | -1.69E-46 |
MS.gene051666 | MS.gene23141 | 0.810687 | 1.02E-50 | -1.69E-46 |
MS.gene051692 | MS.gene23141 | 0.809401 | 1.93E-50 | -1.69E-46 |
MS.gene051810 | MS.gene23141 | 0.836954 | 6.91E-57 | -1.69E-46 |
MS.gene051877 | MS.gene23141 | 0.831267 | 1.84E-55 | -1.69E-46 |
MS.gene052078 | MS.gene23141 | 0.845594 | 3.68E-59 | -1.69E-46 |
MS.gene052271 | MS.gene23141 | 0.898592 | 4.56E-77 | -1.69E-46 |
MS.gene052290 | MS.gene23141 | 0.884828 | 1.37E-71 | -1.69E-46 |
MS.gene052293 | MS.gene23141 | 0.815604 | 8.49E-52 | -1.69E-46 |
MS.gene052310 | MS.gene23141 | 0.851778 | 7.11E-61 | -1.69E-46 |
MS.gene052322 | MS.gene23141 | 0.80799 | 3.86E-50 | -1.69E-46 |
MS.gene052326 | MS.gene23141 | 0.8767 | 1.13E-68 | -1.69E-46 |
MS.gene052379 | MS.gene23141 | 0.862993 | 3.42E-64 | -1.69E-46 |
MS.gene052421 | MS.gene23141 | 0.820228 | 7.66E-53 | -1.69E-46 |
MS.gene052916 | MS.gene23141 | 0.812766 | 3.59E-51 | -1.69E-46 |
MS.gene053009 | MS.gene23141 | 0.866307 | 3.14E-65 | -1.69E-46 |
MS.gene053103 | MS.gene23141 | 0.826696 | 2.35E-54 | -1.69E-46 |
MS.gene053104 | MS.gene23141 | 0.835252 | 1.87E-56 | -1.69E-46 |
MS.gene053207 | MS.gene23141 | 0.80709 | 5.99E-50 | -1.69E-46 |
MS.gene053209 | MS.gene23141 | 0.811389 | 7.18E-51 | -1.69E-46 |
MS.gene053213 | MS.gene23141 | 0.841242 | 5.35E-58 | -1.69E-46 |
MS.gene053286 | MS.gene23141 | 0.831117 | 2.00E-55 | -1.69E-46 |
MS.gene053322 | MS.gene23141 | 0.907999 | 2.76E-81 | -1.69E-46 |
MS.gene053384 | MS.gene23141 | 0.825069 | 5.73E-54 | -1.69E-46 |
MS.gene053632 | MS.gene23141 | 0.812701 | 3.71E-51 | -1.69E-46 |
MS.gene053813 | MS.gene23141 | 0.833509 | 5.12E-56 | -1.69E-46 |
MS.gene053916 | MS.gene23141 | 0.801106 | 1.05E-48 | -1.69E-46 |
MS.gene054123 | MS.gene23141 | 0.818887 | 1.55E-52 | -1.69E-46 |
MS.gene054376 | MS.gene23141 | 0.974122 | 1.33E-137 | -1.69E-46 |
MS.gene05455 | MS.gene23141 | 0.814293 | 1.66E-51 | -1.69E-46 |
MS.gene054642 | MS.gene23141 | 0.856088 | 4.08E-62 | -1.69E-46 |
MS.gene054802 | MS.gene23141 | 0.911193 | 8.02E-83 | -1.69E-46 |
MS.gene054803 | MS.gene23141 | 0.913418 | 6.29E-84 | -1.69E-46 |
MS.gene054804 | MS.gene23141 | 0.915694 | 4.34E-85 | -1.69E-46 |
MS.gene05505 | MS.gene23141 | 0.837616 | 4.68E-57 | -1.69E-46 |
MS.gene055212 | MS.gene23141 | 0.812074 | 5.09E-51 | -1.69E-46 |
MS.gene055254 | MS.gene23141 | 0.903262 | 4.16E-79 | -1.69E-46 |
MS.gene055277 | MS.gene23141 | 0.866549 | 2.63E-65 | -1.69E-46 |
MS.gene055362 | MS.gene23141 | 0.813472 | 2.52E-51 | -1.69E-46 |
MS.gene055390 | MS.gene23141 | 0.831447 | 1.66E-55 | -1.69E-46 |
MS.gene055397 | MS.gene23141 | 0.922366 | 1.08E-88 | -1.69E-46 |
MS.gene055412 | MS.gene23141 | 0.837442 | 5.19E-57 | -1.69E-46 |
MS.gene055422 | MS.gene23141 | 0.819109 | 1.38E-52 | -1.69E-46 |
MS.gene055428 | MS.gene23141 | 0.804069 | 2.58E-49 | -1.69E-46 |
MS.gene055497 | MS.gene23141 | -0.821226 | 4.52E-53 | -1.69E-46 |
MS.gene055499 | MS.gene23141 | 0.92021 | 1.71E-87 | -1.69E-46 |
MS.gene055636 | MS.gene23141 | 0.846185 | 2.55E-59 | -1.69E-46 |
MS.gene055638 | MS.gene23141 | 0.840738 | 7.26E-58 | -1.69E-46 |
MS.gene055647 | MS.gene23141 | 0.872987 | 2.08E-67 | -1.69E-46 |
MS.gene055722 | MS.gene23141 | 0.840345 | 9.20E-58 | -1.69E-46 |
MS.gene055896 | MS.gene23141 | 0.835629 | 1.50E-56 | -1.69E-46 |
MS.gene05592 | MS.gene23141 | 0.87805 | 3.84E-69 | -1.69E-46 |
MS.gene055930 | MS.gene23141 | 0.812172 | 4.85E-51 | -1.69E-46 |
MS.gene056083 | MS.gene23141 | 0.829219 | 5.82E-55 | -1.69E-46 |
MS.gene056191 | MS.gene23141 | 0.805919 | 1.06E-49 | -1.69E-46 |
MS.gene056374 | MS.gene23141 | 0.846927 | 1.60E-59 | -1.69E-46 |
MS.gene056410 | MS.gene23141 | 0.836425 | 9.43E-57 | -1.69E-46 |
MS.gene056609 | MS.gene23141 | 0.845437 | 4.06E-59 | -1.69E-46 |
MS.gene056657 | MS.gene23141 | 0.831376 | 1.73E-55 | -1.69E-46 |
MS.gene056897 | MS.gene23141 | 0.826618 | 2.46E-54 | -1.69E-46 |
MS.gene057011 | MS.gene23141 | 0.858957 | 5.76E-63 | -1.69E-46 |
MS.gene057123 | MS.gene23141 | 0.826779 | 2.25E-54 | -1.69E-46 |
MS.gene057129 | MS.gene23141 | 0.923916 | 1.41E-89 | -1.69E-46 |
MS.gene057146 | MS.gene23141 | 0.83066 | 2.59E-55 | -1.69E-46 |
MS.gene057246 | MS.gene23141 | 0.813127 | 3.00E-51 | -1.69E-46 |
MS.gene057295 | MS.gene23141 | 0.862025 | 6.79E-64 | -1.69E-46 |
MS.gene057331 | MS.gene23141 | 0.835944 | 1.25E-56 | -1.69E-46 |
MS.gene05735 | MS.gene23141 | 0.806648 | 7.43E-50 | -1.69E-46 |
MS.gene057416 | MS.gene23141 | 0.861307 | 1.12E-63 | -1.69E-46 |
MS.gene057926 | MS.gene23141 | 0.801147 | 1.03E-48 | -1.69E-46 |
MS.gene058019 | MS.gene23141 | 0.844493 | 7.31E-59 | -1.69E-46 |
MS.gene058082 | MS.gene23141 | 0.803866 | 2.84E-49 | -1.69E-46 |
MS.gene058293 | MS.gene23141 | 0.886914 | 2.26E-72 | -1.69E-46 |
MS.gene058323 | MS.gene23141 | 0.859952 | 2.90E-63 | -1.69E-46 |
MS.gene058419 | MS.gene23141 | 0.82195 | 3.07E-53 | -1.69E-46 |
MS.gene058660 | MS.gene23141 | 0.876005 | 1.97E-68 | -1.69E-46 |
MS.gene058723 | MS.gene23141 | 0.819438 | 1.16E-52 | -1.69E-46 |
MS.gene058773 | MS.gene23141 | 0.803285 | 3.75E-49 | -1.69E-46 |
MS.gene058787 | MS.gene23141 | 0.812954 | 3.27E-51 | -1.69E-46 |
MS.gene058903 | MS.gene23141 | 0.82824 | 1.00E-54 | -1.69E-46 |
MS.gene058993 | MS.gene23141 | 0.801766 | 7.71E-49 | -1.69E-46 |
MS.gene059029 | MS.gene23141 | 0.840584 | 7.96E-58 | -1.69E-46 |
MS.gene059326 | MS.gene23141 | 0.854171 | 1.47E-61 | -1.69E-46 |
MS.gene059536 | MS.gene23141 | 0.865615 | 5.19E-65 | -1.69E-46 |
MS.gene059597 | MS.gene23141 | 0.806623 | 7.52E-50 | -1.69E-46 |
MS.gene05959 | MS.gene23141 | 0.807381 | 5.20E-50 | -1.69E-46 |
MS.gene059676 | MS.gene23141 | 0.836275 | 1.03E-56 | -1.69E-46 |
MS.gene059677 | MS.gene23141 | 0.818537 | 1.86E-52 | -1.69E-46 |
MS.gene059688 | MS.gene23141 | 0.832142 | 1.12E-55 | -1.69E-46 |
MS.gene059692 | MS.gene23141 | 0.84417 | 8.93E-59 | -1.69E-46 |
MS.gene059695 | MS.gene23141 | 0.847583 | 1.05E-59 | -1.69E-46 |
MS.gene059708 | MS.gene23141 | 0.801644 | 8.17E-49 | -1.69E-46 |
MS.gene059711 | MS.gene23141 | 0.822808 | 1.94E-53 | -1.69E-46 |
MS.gene059718 | MS.gene23141 | 0.812784 | 3.56E-51 | -1.69E-46 |
MS.gene059858 | MS.gene23141 | 0.845637 | 3.59E-59 | -1.69E-46 |
MS.gene059960 | MS.gene23141 | 0.920652 | 9.76E-88 | -1.69E-46 |
MS.gene059974 | MS.gene23141 | 0.824345 | 8.49E-54 | -1.69E-46 |
MS.gene060005 | MS.gene23141 | 0.831184 | 1.93E-55 | -1.69E-46 |
MS.gene060193 | MS.gene23141 | 0.824327 | 8.57E-54 | -1.69E-46 |
MS.gene060356 | MS.gene23141 | 0.829209 | 5.85E-55 | -1.69E-46 |
MS.gene06037 | MS.gene23141 | 0.822253 | 2.61E-53 | -1.69E-46 |
MS.gene060804 | MS.gene23141 | 0.855567 | 5.79E-62 | -1.69E-46 |
MS.gene060818 | MS.gene23141 | 0.845361 | 4.26E-59 | -1.69E-46 |
MS.gene061041 | MS.gene23141 | 0.83585 | 1.32E-56 | -1.69E-46 |
MS.gene061051 | MS.gene23141 | -0.810761 | 9.81E-51 | -1.69E-46 |
MS.gene061134 | MS.gene23141 | 0.807513 | 4.87E-50 | -1.69E-46 |
MS.gene061150 | MS.gene23141 | 0.837833 | 4.12E-57 | -1.69E-46 |
MS.gene061171 | MS.gene23141 | 0.806993 | 6.28E-50 | -1.69E-46 |
MS.gene061200 | MS.gene23141 | 0.931042 | 6.77E-94 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23141.t1 | MTR_7g111880 | 96.000 | 250 | 9 | 1 | 1 | 249 | 1 | 250 | 3.30e-172 | 474 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23141.t1 | AT4G15510 | 64.659 | 249 | 76 | 5 | 10 | 247 | 40 | 287 | 4.09e-105 | 306 |
MS.gene23141.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23141.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23141.t1 | AT4G15510 | 73.039 | 204 | 52 | 2 | 46 | 247 | 3 | 205 | 2.02e-103 | 298 |
MS.gene23141.t1 | AT4G15510 | 69.595 | 148 | 40 | 3 | 35 | 178 | 72 | 218 | 1.67e-62 | 196 |
Find 0 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTCTTGATGAAAATATAT+CGG | + | 51771:8265-8284 | MS.gene23141:CDS | 15.0% |
!!! | ATATTTTCATCAAGAATATA+AGG | - | 51771:8263-8282 | None:intergenic | 15.0% |
!! | AAATAAAATAATTGTGACAG+AGG | - | 51771:7991-8010 | None:intergenic | 20.0% |
!! | TACATTTATCAGAAAAATTG+TGG | + | 51771:8492-8511 | MS.gene23141:intron | 20.0% |
! | GAATATGTTGATACATTTGA+TGG | + | 51771:8167-8186 | MS.gene23141:CDS | 25.0% |
AAAACTTACGGTAATTTGAG+GGG | + | 51771:8540-8559 | MS.gene23141:intron | 30.0% | |
AGAAAATGTGTTTCAAGAAG+AGG | + | 51771:8809-8828 | MS.gene23141:CDS | 30.0% | |
CAAAACTTACGGTAATTTGA+GGG | + | 51771:8539-8558 | MS.gene23141:intron | 30.0% | |
CATTCAACTATCCATCAAAT+TGG | + | 51771:8195-8214 | MS.gene23141:CDS | 30.0% | |
CTTACTTGAATCCAATTTGA+TGG | - | 51771:8209-8228 | None:intergenic | 30.0% | |
TCAAATTGGATTCAAGTAAG+AGG | + | 51771:8209-8228 | MS.gene23141:CDS | 30.0% | |
! | CAAATTGTACTATCAAGTTG+AGG | + | 51771:8463-8482 | MS.gene23141:CDS | 30.0% |
! | TCTTCTTGAAACACATTTTC+TGG | - | 51771:8810-8829 | None:intergenic | 30.0% |
!! | AATGACATTGCTTTTCTTCT+AGG | - | 51771:8080-8099 | None:intergenic | 30.0% |
ATGGATGGAATTTACCGAAT+TGG | - | 51771:7954-7973 | None:intergenic | 35.0% | |
ATTCAAGACTGTTCAAGACT+TGG | + | 51771:8316-8335 | MS.gene23141:CDS | 35.0% | |
CTCTGTTCTTGCAAAACTTA+CGG | + | 51771:8528-8547 | MS.gene23141:intron | 35.0% | |
GCAAAACTTACGGTAATTTG+AGG | + | 51771:8538-8557 | MS.gene23141:intron | 35.0% | |
GTAATCTCAACTCATACAGT+TGG | - | 51771:8782-8801 | None:intergenic | 35.0% | |
GTCTTGAATTTCGAAGAAGA+AGG | - | 51771:8305-8324 | None:intergenic | 35.0% | |
TGGATGGAATTTACCGAATT+GGG | - | 51771:7953-7972 | None:intergenic | 35.0% | |
TTACTGAGTTTATGTCCACT+AGG | + | 51771:8381-8400 | MS.gene23141:CDS | 35.0% | |
TTCAAGACTGTTCAAGACTT+GGG | + | 51771:8317-8336 | MS.gene23141:CDS | 35.0% | |
! | GGGTGTCTTTTATATGGTAA+TGG | + | 51771:8560-8579 | MS.gene23141:intron | 35.0% |
!!! | TGGTGCTGATATTTTCTTCA+GGG | + | 51771:8235-8254 | MS.gene23141:CDS | 35.0% |
!!! | TTTGAGGGGTGTCTTTTATA+TGG | + | 51771:8554-8573 | MS.gene23141:intron | 35.0% |
ACATATTCACGAAACACACG+AGG | - | 51771:8155-8174 | None:intergenic | 40.0% | |
ACCCGTTGTTGTGATTGTAT+TGG | - | 51771:7867-7886 | None:intergenic | 40.0% | |
ACTTACATTCTCTCCGACAT+TGG | + | 51771:8110-8129 | MS.gene23141:CDS | 40.0% | |
AGAGGAGAAAGCTCATGAAA+TGG | - | 51771:7973-7992 | None:intergenic | 40.0% | |
ATGGAAGTGAAATGGTGACA+TGG | - | 51771:7903-7922 | None:intergenic | 40.0% | |
GAATTTACCGAATTGGGTGT+GGG | - | 51771:7947-7966 | None:intergenic | 40.0% | |
GAGAAAGCTCATGAAATGGA+TGG | - | 51771:7969-7988 | None:intergenic | 40.0% | |
GCCAATACAATCACAACAAC+GGG | + | 51771:7863-7882 | MS.gene23141:CDS | 40.0% | |
GGCCAATACAATCACAACAA+CGG | + | 51771:7862-7881 | MS.gene23141:CDS | 40.0% | |
TAGCGCTAGACTACAATGTA+TGG | - | 51771:8588-8607 | None:intergenic | 40.0% | |
TGCTAATGCTGTACCAATGT+CGG | - | 51771:8126-8145 | None:intergenic | 40.0% | |
TGCTGTTATGCCACAAGATA+GGG | + | 51771:8701-8720 | MS.gene23141:CDS | 40.0% | |
TGGAAGTGAAATGGTGACAT+GGG | - | 51771:7902-7921 | None:intergenic | 40.0% | |
TTTCAACTCCTAGAACAGAC+AGG | - | 51771:8755-8774 | None:intergenic | 40.0% | |
! | TTGCTGTTATGCCACAAGAT+AGG | + | 51771:8700-8719 | MS.gene23141:CDS | 40.0% |
!! | TGTGTGTTGTTTGTGTTGCT+AGG | + | 51771:8644-8663 | MS.gene23141:intron | 40.0% |
!!! | CTGGTGCTGATATTTTCTTC+AGG | + | 51771:8234-8253 | MS.gene23141:CDS | 40.0% |
ACGTTTAACACCAAGCCTAG+TGG | - | 51771:8399-8418 | None:intergenic | 45.0% | |
AGTGAAATGGTGACATGGGT+CGG | - | 51771:7898-7917 | None:intergenic | 45.0% | |
ATCATCAGCAACTCTCTCAG+AGG | - | 51771:8441-8460 | None:intergenic | 45.0% | |
CATTTCTCCCACACCCAATT+CGG | + | 51771:7937-7956 | MS.gene23141:CDS | 45.0% | |
GAGTGAACTTCGTCAAGTCA+TGG | + | 51771:8833-8852 | MS.gene23141:CDS | 45.0% | |
GAGTTTATGTCCACTAGGCT+TGG | + | 51771:8386-8405 | MS.gene23141:CDS | 45.0% | |
GGAATTTACCGAATTGGGTG+TGG | - | 51771:7948-7967 | None:intergenic | 45.0% | |
GGCTTCGTTTCGAGCAAATA+AGG | + | 51771:8854-8873 | MS.gene23141:CDS | 45.0% | |
TCTGAGAGAGTTGCTGATGA+TGG | + | 51771:8440-8459 | MS.gene23141:CDS | 45.0% | |
TGTTATGCCACAAGATAGGG+TGG | + | 51771:8704-8723 | MS.gene23141:CDS | 45.0% | |
! | TGGATTCAAGTAAGAGGTGC+TGG | + | 51771:8215-8234 | MS.gene23141:CDS | 45.0% |
!! | ACTTTCTTCCCAGCTTGTTG+AGG | - | 51771:8347-8366 | None:intergenic | 45.0% |
AAACGCACCACCCTATCTTG+TGG | - | 51771:8714-8733 | None:intergenic | 50.0% | |
ACAAGATAGGGTGGTGCGTT+TGG | + | 51771:8713-8732 | MS.gene23141:CDS | 50.0% | |
ATAGGGTGGTGCGTTTGGAA+TGG | + | 51771:8718-8737 | MS.gene23141:CDS | 50.0% | |
ATCAGCAACTCTCTCAGAGG+TGG | - | 51771:8438-8457 | None:intergenic | 50.0% | |
CGAATTGGGTGTGGGAGAAA+TGG | - | 51771:7939-7958 | None:intergenic | 50.0% | |
CGAGGGGAATGGAAGTGAAA+TGG | - | 51771:7911-7930 | None:intergenic | 50.0% | |
GTGAAATGGTGACATGGGTC+GGG | - | 51771:7897-7916 | None:intergenic | 50.0% | |
! | TAGGGTGGTGCGTTTGGAAT+GGG | + | 51771:8719-8738 | MS.gene23141:CDS | 50.0% |
! | TGCGTTTGGAATGGGATAGG+AGG | + | 51771:8727-8746 | MS.gene23141:CDS | 50.0% |
! | TGGTGCGTTTGGAATGGGAT+AGG | + | 51771:8724-8743 | MS.gene23141:CDS | 50.0% |
!! | AGGAGGTACCTGTCTGTTCT+AGG | + | 51771:8744-8763 | MS.gene23141:CDS | 50.0% |
AAATGGAGCAGCGAGGGGAA+TGG | - | 51771:7922-7941 | None:intergenic | 55.0% | |
TGGGAGAAATGGAGCAGCGA+GGG | - | 51771:7928-7947 | None:intergenic | 55.0% | |
TGGGTTCGCCTCAACAAGCT+GGG | + | 51771:8336-8355 | MS.gene23141:CDS | 55.0% | |
TTGGGTTCGCCTCAACAAGC+TGG | + | 51771:8335-8354 | MS.gene23141:CDS | 55.0% | |
GGGAGAAATGGAGCAGCGAG+GGG | - | 51771:7927-7946 | None:intergenic | 60.0% | |
GTGGGAGAAATGGAGCAGCG+AGG | - | 51771:7929-7948 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51771 | gene | 7860 | 8887 | 7860 | ID=MS.gene23141 |
51771 | mRNA | 7860 | 8887 | 7860 | ID=MS.gene23141.t1;Parent=MS.gene23141 |
51771 | exon | 7860 | 7958 | 7860 | ID=MS.gene23141.t1.exon1;Parent=MS.gene23141.t1 |
51771 | CDS | 7860 | 7958 | 7860 | ID=cds.MS.gene23141.t1;Parent=MS.gene23141.t1 |
51771 | exon | 8056 | 8484 | 8056 | ID=MS.gene23141.t1.exon2;Parent=MS.gene23141.t1 |
51771 | CDS | 8056 | 8484 | 8056 | ID=cds.MS.gene23141.t1;Parent=MS.gene23141.t1 |
51771 | exon | 8666 | 8887 | 8666 | ID=MS.gene23141.t1.exon3;Parent=MS.gene23141.t1 |
51771 | CDS | 8666 | 8887 | 8666 | ID=cds.MS.gene23141.t1;Parent=MS.gene23141.t1 |
Gene Sequence |
Protein sequence |