Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99139.t1 | XP_013443838.1 | 92.9 | 294 | 15 | 2 | 1 | 292 | 1 | 290 | 5.80E-138 | 500.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99139.t1 | O80361 | 63.4 | 257 | 88 | 3 | 12 | 263 | 2 | 257 | 2.1e-83 | 310.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99139.t1 | A0A072TM19 | 92.9 | 294 | 15 | 2 | 1 | 292 | 1 | 290 | 4.2e-138 | 500.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene99139 | 0.819312 | 1.24E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene99139 | 0.860564 | 1.89E-63 | -1.69E-46 |
| MS.gene049389 | MS.gene99139 | 0.834592 | 2.74E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene99139 | 0.840701 | 7.42E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene99139 | 0.865684 | 4.94E-65 | -1.69E-46 |
| MS.gene049614 | MS.gene99139 | 0.839857 | 1.23E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene99139 | 0.842891 | 1.96E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene99139 | 0.834572 | 2.77E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene99139 | 0.864862 | 8.96E-65 | -1.69E-46 |
| MS.gene049760 | MS.gene99139 | 0.834816 | 2.41E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene99139 | 0.812335 | 4.46E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene99139 | 0.89124 | 4.76E-74 | -1.69E-46 |
| MS.gene050099 | MS.gene99139 | 0.822864 | 1.89E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene99139 | 0.824121 | 9.58E-54 | -1.69E-46 |
| MS.gene050231 | MS.gene99139 | 0.819 | 1.46E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene99139 | 0.895711 | 7.39E-76 | -1.69E-46 |
| MS.gene050397 | MS.gene99139 | 0.825418 | 4.74E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene99139 | 0.863418 | 2.52E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene99139 | 0.820443 | 6.84E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene99139 | 0.840525 | 8.25E-58 | -1.69E-46 |
| MS.gene05053 | MS.gene99139 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene99139 | 0.804914 | 1.72E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene99139 | 0.873982 | 9.63E-68 | -1.69E-46 |
| MS.gene050770 | MS.gene99139 | 0.874258 | 7.77E-68 | -1.69E-46 |
| MS.gene050783 | MS.gene99139 | 0.832444 | 9.42E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene99139 | 0.832378 | 9.78E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene99139 | 0.899305 | 2.26E-77 | -1.69E-46 |
| MS.gene051387 | MS.gene99139 | 0.813011 | 3.18E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene99139 | 0.920629 | 1.00E-87 | -1.69E-46 |
| MS.gene051582 | MS.gene99139 | 0.85305 | 3.09E-61 | -1.69E-46 |
| MS.gene051662 | MS.gene99139 | 0.843331 | 1.50E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene99139 | 0.836219 | 1.06E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene99139 | 0.830622 | 2.65E-55 | -1.69E-46 |
| MS.gene051692 | MS.gene99139 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene99139 | 0.804768 | 1.84E-49 | -1.69E-46 |
| MS.gene051877 | MS.gene99139 | 0.828417 | 9.10E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene99139 | 0.899287 | 2.30E-77 | -1.69E-46 |
| MS.gene052178 | MS.gene99139 | 0.859431 | 4.16E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene99139 | 0.834602 | 2.73E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene99139 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene99139 | 0.865432 | 5.93E-65 | -1.69E-46 |
| MS.gene052293 | MS.gene99139 | 0.802113 | 6.54E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene99139 | 0.873013 | 2.04E-67 | -1.69E-46 |
| MS.gene052322 | MS.gene99139 | 0.849299 | 3.53E-60 | -1.69E-46 |
| MS.gene052326 | MS.gene99139 | 0.907767 | 3.55E-81 | -1.69E-46 |
| MS.gene052340 | MS.gene99139 | 0.838709 | 2.45E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene99139 | 0.811525 | 6.70E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene99139 | 0.805789 | 1.13E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene99139 | 0.841809 | 3.79E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene99139 | 0.879032 | 1.74E-69 | -1.69E-46 |
| MS.gene053104 | MS.gene99139 | 0.824603 | 7.38E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene99139 | 0.805027 | 1.63E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene99139 | 0.821747 | 3.43E-53 | -1.69E-46 |
| MS.gene053322 | MS.gene99139 | 0.886984 | 2.12E-72 | -1.69E-46 |
| MS.gene053557 | MS.gene99139 | 0.833198 | 6.12E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene99139 | 0.877931 | 4.23E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene99139 | 0.813243 | 2.82E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene99139 | 0.807878 | 4.08E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene99139 | 0.821688 | 3.53E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene99139 | 0.884892 | 1.30E-71 | -1.69E-46 |
| MS.gene054376 | MS.gene99139 | 0.872261 | 3.64E-67 | -1.69E-46 |
| MS.gene054473 | MS.gene99139 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene99139 | 0.87831 | 3.11E-69 | -1.69E-46 |
| MS.gene054802 | MS.gene99139 | 0.883664 | 3.71E-71 | -1.69E-46 |
| MS.gene054803 | MS.gene99139 | 0.883567 | 4.02E-71 | -1.69E-46 |
| MS.gene054804 | MS.gene99139 | 0.884314 | 2.13E-71 | -1.69E-46 |
| MS.gene054955 | MS.gene99139 | 0.812862 | 3.42E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene99139 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene99139 | 0.846717 | 1.82E-59 | -1.69E-46 |
| MS.gene055277 | MS.gene99139 | 0.897109 | 1.93E-76 | -1.69E-46 |
| MS.gene055390 | MS.gene99139 | 0.873766 | 1.14E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene99139 | 0.842549 | 2.42E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene99139 | 0.864324 | 1.32E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene99139 | 0.914754 | 1.32E-84 | -1.69E-46 |
| MS.gene055428 | MS.gene99139 | 0.912776 | 1.32E-83 | -1.69E-46 |
| MS.gene055499 | MS.gene99139 | 0.843733 | 1.17E-58 | -1.69E-46 |
| MS.gene055647 | MS.gene99139 | 0.803506 | 3.37E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene99139 | 0.845088 | 5.05E-59 | -1.69E-46 |
| MS.gene055896 | MS.gene99139 | 0.865236 | 6.84E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene99139 | 0.818178 | 2.25E-52 | -1.69E-46 |
| MS.gene055930 | MS.gene99139 | 0.83035 | 3.09E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene99139 | 0.81474 | 1.32E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene99139 | 0.874886 | 4.76E-68 | -1.69E-46 |
| MS.gene056410 | MS.gene99139 | 0.82931 | 5.53E-55 | -1.69E-46 |
| MS.gene056451 | MS.gene99139 | 0.80491 | 1.72E-49 | -1.69E-46 |
| MS.gene056452 | MS.gene99139 | 0.802068 | 6.69E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene99139 | 0.817002 | 4.13E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene99139 | 0.849229 | 3.70E-60 | -1.69E-46 |
| MS.gene056796 | MS.gene99139 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene056931 | MS.gene99139 | 0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene99139 | 0.804903 | 1.73E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene99139 | 0.85972 | 3.40E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene99139 | 0.864945 | 8.43E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene99139 | 0.822349 | 2.48E-53 | -1.69E-46 |
| MS.gene057123 | MS.gene99139 | 0.865758 | 4.68E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene99139 | 0.860885 | 1.51E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene99139 | 0.842524 | 2.45E-58 | -1.69E-46 |
| MS.gene057245 | MS.gene99139 | 0.84436 | 7.94E-59 | -1.69E-46 |
| MS.gene057295 | MS.gene99139 | 0.884585 | 1.69E-71 | -1.69E-46 |
| MS.gene05733 | MS.gene99139 | 0.839582 | 1.45E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene99139 | 0.800455 | 1.43E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene99139 | 0.848288 | 6.74E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene99139 | 0.807521 | 4.85E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene99139 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene99139 | 0.824513 | 7.75E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene99139 | 0.874149 | 8.46E-68 | -1.69E-46 |
| MS.gene058006 | MS.gene99139 | 0.81248 | 4.15E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene99139 | 0.803972 | 2.70E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene99139 | 0.825862 | 3.72E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene99139 | 0.854036 | 1.61E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene99139 | 0.844461 | 7.45E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene99139 | 0.830201 | 3.36E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene99139 | 0.918357 | 1.72E-86 | -1.69E-46 |
| MS.gene058365 | MS.gene99139 | 0.807127 | 5.88E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene99139 | 0.911965 | 3.34E-83 | -1.69E-46 |
| MS.gene058787 | MS.gene99139 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene99139 | 0.801916 | 7.18E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene99139 | 0.816502 | 5.35E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene99139 | 0.821018 | 5.05E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene99139 | 0.862632 | 4.42E-64 | -1.69E-46 |
| MS.gene059228 | MS.gene99139 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene059326 | MS.gene99139 | 0.867903 | 9.71E-66 | -1.69E-46 |
| MS.gene059342 | MS.gene99139 | 0.816734 | 4.75E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene99139 | 0.852465 | 4.53E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene99139 | 0.846434 | 2.18E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene99139 | 0.902363 | 1.05E-78 | -1.69E-46 |
| MS.gene05959 | MS.gene99139 | 0.846565 | 2.00E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene99139 | 0.884262 | 2.23E-71 | -1.69E-46 |
| MS.gene059688 | MS.gene99139 | 0.860365 | 2.17E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene99139 | 0.868374 | 6.85E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene99139 | 0.869139 | 3.87E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene99139 | 0.84887 | 4.65E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene99139 | 0.841732 | 3.98E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene99139 | 0.890548 | 8.92E-74 | -1.69E-46 |
| MS.gene059960 | MS.gene99139 | 0.884706 | 1.53E-71 | -1.69E-46 |
| MS.gene060005 | MS.gene99139 | 0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene99139 | 0.82948 | 5.03E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene99139 | 0.831828 | 1.34E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene99139 | 0.826282 | 2.96E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene99139 | 0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene99139 | 0.810517 | 1.11E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene99139 | 0.823129 | 1.64E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene99139 | 0.843893 | 1.06E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene99139 | 0.874747 | 5.30E-68 | -1.69E-46 |
| MS.gene061051 | MS.gene99139 | -0.852146 | 5.59E-61 | -1.69E-46 |
| MS.gene061112 | MS.gene99139 | 0.811466 | 6.90E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene99139 | 0.878067 | 3.79E-69 | -1.69E-46 |
| MS.gene061265 | MS.gene99139 | 0.804933 | 1.70E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99139.t1 | MTR_8g006995 | 94.737 | 266 | 8 | 2 | 29 | 292 | 29 | 290 | 0.0 | 511 |
| MS.gene99139.t1 | MTR_8g007000 | 88.312 | 77 | 9 | 0 | 186 | 262 | 618 | 694 | 2.76e-39 | 145 |
| MS.gene99139.t1 | MTR_3g107920 | 37.383 | 214 | 124 | 6 | 48 | 257 | 128 | 335 | 3.89e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99139.t1 | AT1G07320 | 69.369 | 222 | 64 | 2 | 41 | 259 | 42 | 262 | 1.42e-105 | 309 |
| MS.gene99139.t1 | AT1G07320 | 69.369 | 222 | 64 | 2 | 41 | 259 | 42 | 262 | 1.52e-105 | 309 |
| MS.gene99139.t1 | AT1G07320 | 69.369 | 222 | 64 | 2 | 41 | 259 | 42 | 262 | 1.77e-105 | 308 |
| MS.gene99139.t1 | AT1G07320 | 69.369 | 222 | 64 | 2 | 41 | 259 | 42 | 262 | 1.77e-105 | 308 |
| MS.gene99139.t1 | AT2G20060 | 36.408 | 206 | 117 | 7 | 53 | 252 | 91 | 288 | 8.25e-28 | 109 |
Find 91 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGAGTGAATTTGATTT+TGG | 0.177945 | 8.2:+82775208 | None:intergenic |
| ATACTCCAATCCCTTGGTTT+GGG | 0.237337 | 8.2:+82774873 | None:intergenic |
| TTAGAATGTGAATTTGAATT+TGG | 0.246363 | 8.2:+82775191 | None:intergenic |
| CTCTGACTTCGGCGCGTGTT+AGG | 0.262659 | 8.2:+82774994 | None:intergenic |
| ATACTAATGATTTACCTTCT+TGG | 0.262790 | 8.2:+82774460 | None:intergenic |
| AATACTCCAATCCCTTGGTT+TGG | 0.310060 | 8.2:+82774872 | None:intergenic |
| TTCAAATAATCCACAGCATC+AGG | 0.333341 | 8.2:+82774552 | None:intergenic |
| TTGTTGGCTAGTAGGAATAT+TGG | 0.349461 | 8.2:-82774648 | MS.gene99139:CDS |
| GAAAACCGGCCGAGCACGTC+AGG | 0.350829 | 8.2:-82774943 | MS.gene99139:CDS |
| AGAAAGTGTTGTTGGCTAGT+AGG | 0.396950 | 8.2:-82774656 | MS.gene99139:CDS |
| TCGGCACTTTCTTCTGCGTC+TGG | 0.403489 | 8.2:+82773115 | None:intergenic |
| GGCGAGTGCGGCGGTGAATA+CGG | 0.409725 | 8.2:-82774805 | MS.gene99139:CDS |
| GATTATTTGAATGGTAGGTA+TGG | 0.413472 | 8.2:-82774540 | MS.gene99139:CDS |
| TGTTGGCTAGTAGGAATATT+GGG | 0.414394 | 8.2:-82774647 | MS.gene99139:CDS |
| TCTGACTTCGGCGCGTGTTA+GGG | 0.430801 | 8.2:+82774995 | None:intergenic |
| GAGTATTAAGATTAATAAGA+AGG | 0.437393 | 8.2:-82774856 | MS.gene99139:CDS |
| ATTATTTGAATGGTAGGTAT+GGG | 0.441937 | 8.2:-82774539 | MS.gene99139:CDS |
| AAAGAAAGAGAAGTTGAAGT+TGG | 0.442195 | 8.2:+82775266 | None:intergenic |
| CTCCCACTCCTCTCCTTCTC+CGG | 0.450034 | 8.2:-82775137 | MS.gene99139:CDS |
| GGAACCCTGACGTGCTCGGC+CGG | 0.453508 | 8.2:+82774938 | None:intergenic |
| TTGGCCCCAAACCAAGGGAT+TGG | 0.458041 | 8.2:-82774878 | MS.gene99139:CDS |
| CCCTACAACCAAAAGAAAAC+CGG | 0.459895 | 8.2:-82774957 | MS.gene99139:CDS |
| ATCTTAATACTCCAATCCCT+TGG | 0.462823 | 8.2:+82774867 | None:intergenic |
| GATGCTGTGGATTATTTGAA+TGG | 0.463739 | 8.2:-82774549 | MS.gene99139:CDS |
| TCCTTCTCCGGCGAGAAAAT+CGG | 0.472488 | 8.2:-82775125 | MS.gene99139:CDS |
| GGTGGCGAGTTTGCAAGAAA+TGG | 0.474159 | 8.2:+82775160 | None:intergenic |
| GGTGAATACGGTTGTGGTGG+AGG | 0.478549 | 8.2:-82774793 | MS.gene99139:CDS |
| CGCCGGAGAAGGAGAGGAGT+GGG | 0.479277 | 8.2:+82775135 | None:intergenic |
| CGGAGAAGGAGAGGAGTGGG+AGG | 0.479353 | 8.2:+82775138 | None:intergenic |
| TCTGCCACCACCTCTGACTT+CGG | 0.481182 | 8.2:+82774983 | None:intergenic |
| GAGTTTGCGGATGAGTTTGA+GGG | 0.483719 | 8.2:-82774771 | MS.gene99139:CDS |
| GGAGTTTGCGGATGAGTTTG+AGG | 0.483961 | 8.2:-82774772 | MS.gene99139:CDS |
| CGCGCCGAAGTCAGAGGTGG+TGG | 0.491088 | 8.2:-82774987 | MS.gene99139:CDS |
| GGCTATGAAACGATGGGGAT+TGG | 0.498185 | 8.2:-82774721 | MS.gene99139:CDS |
| GGTTGTGGTGGAGGAGTTTG+CGG | 0.504523 | 8.2:-82774784 | MS.gene99139:CDS |
| TTCGACTGCGGTGGCGAGTG+CGG | 0.504892 | 8.2:-82774817 | MS.gene99139:CDS |
| GGCGCGTGAGGTGGAAGGAG+GGG | 0.508091 | 8.2:+82775076 | None:intergenic |
| ACGGCGCGTGAGGTGGAAGG+AGG | 0.512712 | 8.2:+82775074 | None:intergenic |
| ACACCTCTCCGACCCGGCGG+TGG | 0.514026 | 8.2:-82774909 | MS.gene99139:CDS |
| CGGCGCGTGAGGTGGAAGGA+GGG | 0.515561 | 8.2:+82775075 | None:intergenic |
| CTGTGGATTATTTGAATGGT+AGG | 0.517004 | 8.2:-82774545 | MS.gene99139:CDS |
| GAAGGAGAGGAGTGGGAGGG+TGG | 0.517110 | 8.2:+82775142 | None:intergenic |
| TGTTCTTACCCCTGATGCTG+TGG | 0.521184 | 8.2:-82774562 | MS.gene99139:CDS |
| GTGGACGACGGCGCGTGAGG+TGG | 0.527072 | 8.2:+82775067 | None:intergenic |
| GAAGTAGAGGATAGCCAAGA+AGG | 0.527296 | 8.2:-82774474 | MS.gene99139:intron |
| GGTGAAGGAGAAAGTGTTGT+TGG | 0.529186 | 8.2:-82774664 | MS.gene99139:CDS |
| GACTGGAACCCTGACGTGCT+CGG | 0.533930 | 8.2:+82774934 | None:intergenic |
| TACTCCAATCCCTTGGTTTG+GGG | 0.536999 | 8.2:+82774874 | None:intergenic |
| GATGATGGCGCGGTGGACGA+CGG | 0.542754 | 8.2:+82775055 | None:intergenic |
| GACTTCGGCGCGTGTTAGGG+TGG | 0.548576 | 8.2:+82774998 | None:intergenic |
| TTCGGCGCGTGTTAGGGTGG+AGG | 0.548956 | 8.2:+82775001 | None:intergenic |
| AGATTAATAAGAAGGAGAAG+AGG | 0.552891 | 8.2:-82774848 | MS.gene99139:CDS |
| TCAAATAATCCACAGCATCA+GGG | 0.560294 | 8.2:+82774553 | None:intergenic |
| GCGGTGGACGACGGCGCGTG+AGG | 0.567418 | 8.2:+82775064 | None:intergenic |
| GACGCAGAAGAAAGTGCCGA+TGG | 0.571572 | 8.2:-82773112 | MS.gene99139:CDS |
| ACGCAGAAGAAAGTGCCGAT+GGG | 0.577486 | 8.2:-82773111 | MS.gene99139:CDS |
| TATTGCGGCTATGAAACGAT+GGG | 0.578180 | 8.2:-82774727 | MS.gene99139:CDS |
| GGCGCGTGTTAGGGTGGAGG+CGG | 0.579163 | 8.2:+82775004 | None:intergenic |
| AAATCACACCACCGCCGGGT+CGG | 0.584856 | 8.2:+82774901 | None:intergenic |
| TGCGGCGGTGAATACGGTTG+TGG | 0.587615 | 8.2:-82774799 | MS.gene99139:CDS |
| CGCAGAAGAAAGTGCCGATG+GGG | 0.589593 | 8.2:-82773110 | MS.gene99139:CDS |
| GGAGAAGGAGAGGAGTGGGA+GGG | 0.590282 | 8.2:+82775139 | None:intergenic |
| ACGACGGCGCGTGAGGTGGA+AGG | 0.592420 | 8.2:+82775071 | None:intergenic |
| TCATACAAATTCAACGTCCT+CGG | 0.595999 | 8.2:+82774606 | None:intergenic |
| GACTGCGGTGGCGAGTGCGG+CGG | 0.603141 | 8.2:-82774814 | MS.gene99139:CDS |
| GGGTCGGAGAGGTGTACGAC+TGG | 0.605488 | 8.2:+82774917 | None:intergenic |
| TCGCCGGAGAAGGAGAGGAG+TGG | 0.605970 | 8.2:+82775134 | None:intergenic |
| GGCGGTGAATACGGTTGTGG+TGG | 0.606327 | 8.2:-82774796 | MS.gene99139:CDS |
| TTATTTGAATGGTAGGTATG+GGG | 0.606640 | 8.2:-82774538 | MS.gene99139:CDS |
| AGTTTGCGGATGAGTTTGAG+GGG | 0.607552 | 8.2:-82774770 | MS.gene99139:CDS |
| AGTCGTACACCTCTCCGACC+CGG | 0.609736 | 8.2:-82774915 | MS.gene99139:CDS |
| ACACCACCGCCGGGTCGGAG+AGG | 0.612374 | 8.2:+82774906 | None:intergenic |
| AAATCATCAATTCACCCCAT+CGG | 0.617100 | 8.2:+82773096 | None:intergenic |
| CTAACACGCGCCGAAGTCAG+AGG | 0.624556 | 8.2:-82774993 | MS.gene99139:CDS |
| GAGGCTTGCGATTTCGACTG+CGG | 0.627957 | 8.2:-82774829 | MS.gene99139:CDS |
| TTATTGCGGCTATGAAACGA+TGG | 0.636194 | 8.2:-82774728 | MS.gene99139:CDS |
| TGGTGATTATGTCGAACAAG+AGG | 0.637010 | 8.2:-82774496 | MS.gene99139:CDS |
| CAAATAATCCACAGCATCAG+GGG | 0.638391 | 8.2:+82774554 | None:intergenic |
| ACGATGGGGATTGGATCCGA+CGG | 0.638837 | 8.2:-82774712 | MS.gene99139:CDS |
| TGTCGAACAAGAGGAAGTAG+AGG | 0.639664 | 8.2:-82774487 | MS.gene99139:CDS |
| AAAACCGGCCGAGCACGTCA+GGG | 0.642897 | 8.2:-82774942 | MS.gene99139:CDS |
| GACAGTGAACAAGATGATGA+TGG | 0.646519 | 8.2:-82774516 | MS.gene99139:CDS |
| GCTTGCGATTTCGACTGCGG+TGG | 0.656264 | 8.2:-82774826 | MS.gene99139:CDS |
| ATTGCGGCTATGAAACGATG+GGG | 0.665331 | 8.2:-82774726 | MS.gene99139:CDS |
| TGAGGGGAATGCGAAGACGA+AGG | 0.671267 | 8.2:-82774754 | MS.gene99139:CDS |
| GAAGGTCGTGGATGATGGCG+CGG | 0.674098 | 8.2:+82775045 | None:intergenic |
| GGTCGTGGATGATGGCGCGG+TGG | 0.680737 | 8.2:+82775048 | None:intergenic |
| ACACGCGCCGAAGTCAGAGG+TGG | 0.682489 | 8.2:-82774990 | MS.gene99139:CDS |
| GAAGACGAAGGAGTTTATTG+CGG | 0.685831 | 8.2:-82774742 | MS.gene99139:CDS |
| GACCTTCAAAACAAACGTCG+CGG | 0.705449 | 8.2:-82775029 | MS.gene99139:CDS |
| CGTACACCTCTCCGACCCGG+CGG | 0.776483 | 8.2:-82774912 | MS.gene99139:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATAAGTTTTTTACAAAAT+TGG | + | chr8.2:82774565-82774584 | None:intergenic | 15.0% |
| !! | ACAAGATACAATTACAAATT+CGG | - | chr8.2:82774189-82774208 | MS.gene99139:intron | 20.0% |
| !! | GAGTATTAAGATTAATAAGA+AGG | - | chr8.2:82773539-82773558 | MS.gene99139:intron | 20.0% |
| !! | TATTTGAAAATGTTTCATTG+AGG | - | chr8.2:82774701-82774720 | MS.gene99139:CDS | 20.0% |
| !! | TTAGAATGTGAATTTGAATT+TGG | + | chr8.2:82773207-82773226 | None:intergenic | 20.0% |
| !! | TTATAAGTAGTTCACTTATT+TGG | - | chr8.2:82774864-82774883 | MS.gene99139:CDS | 20.0% |
| !!! | TAGTTTTTAAATTGAAGTTG+CGG | - | chr8.2:82774098-82774117 | MS.gene99139:intron | 20.0% |
| ! | AATATAATAGGTTTCTGACT+TGG | - | chr8.2:82775231-82775250 | MS.gene99139:CDS | 25.0% |
| ! | ATACTAATGATTTACCTTCT+TGG | + | chr8.2:82773938-82773957 | None:intergenic | 25.0% |
| ! | ATTATTTGAATGGTAGGTAT+GGG | - | chr8.2:82773856-82773875 | MS.gene99139:intron | 25.0% |
| ! | GCAACTTCAATTTAAAAACT+AGG | + | chr8.2:82774099-82774118 | None:intergenic | 25.0% |
| ! | GGTAGAAATCAATTCAAATT+TGG | - | chr8.2:82774722-82774741 | MS.gene99139:CDS | 25.0% |
| ! | GGTAGAAATCATTTCAAATT+TGG | - | chr8.2:82774665-82774684 | MS.gene99139:CDS | 25.0% |
| ! | TACTAGTTGAATATTGATGT+CGG | - | chr8.2:82774050-82774069 | MS.gene99139:intron | 25.0% |
| ! | TATTCCTTAAGCATTATAGT+AGG | - | chr8.2:82774580-82774599 | MS.gene99139:CDS | 25.0% |
| ! | TGAATTGAAATGTTTCCTTT+AGG | - | chr8.2:82774644-82774663 | MS.gene99139:CDS | 25.0% |
| ! | TTGAAATGATTTCTACCTAA+AGG | + | chr8.2:82774662-82774681 | None:intergenic | 25.0% |
| !! | AATTTTAGATGGTACTATTG+TGG | - | chr8.2:82774154-82774173 | MS.gene99139:intron | 25.0% |
| !! | ATATGTTGGTCAATTTTAGA+TGG | - | chr8.2:82774143-82774162 | MS.gene99139:intron | 25.0% |
| !! | GGATAAACTTTTATTGAACA+TGG | - | chr8.2:82774444-82774463 | MS.gene99139:intron | 25.0% |
| !! | TTATTTGGAGTCATTAACTA+TGG | - | chr8.2:82774879-82774898 | MS.gene99139:CDS | 25.0% |
| !!! | ATTTGGAGTGAATTTGATTT+TGG | + | chr8.2:82773190-82773209 | None:intergenic | 25.0% |
| !!! | ATTTGGTTTAAGTTGCTAAA+TGG | - | chr8.2:82774739-82774758 | MS.gene99139:CDS | 25.0% |
| !!! | GCAGCTATAGTTTTAAATAA+AGG | + | chr8.2:82774377-82774396 | None:intergenic | 25.0% |
| !!! | TGCAGATCTTTTAAAATCTT+GGG | - | chr8.2:82774394-82774413 | MS.gene99139:intron | 25.0% |
| !!! | TTTGGAGTGAATTTGATTTT+GGG | + | chr8.2:82773189-82773208 | None:intergenic | 25.0% |
| !!! | TTTTGAGTTGCTTATTATTG+TGG | - | chr8.2:82775185-82775204 | MS.gene99139:CDS | 25.0% |
| AAAATGAGTCAGTGAGATTT+AGG | + | chr8.2:82775075-82775094 | None:intergenic | 30.0% | |
| AAAGAAAGAGAAGTTGAAGT+TGG | + | chr8.2:82773132-82773151 | None:intergenic | 30.0% | |
| ACAACCTACTATAATGCTTA+AGG | + | chr8.2:82774587-82774606 | None:intergenic | 30.0% | |
| AGATTAATAAGAAGGAGAAG+AGG | - | chr8.2:82773547-82773566 | MS.gene99139:intron | 30.0% | |
| ATGGGTCTGAGTAATATAAT+AGG | - | chr8.2:82775219-82775238 | MS.gene99139:CDS | 30.0% | |
| GATTATTTGAATGGTAGGTA+TGG | - | chr8.2:82773855-82773874 | MS.gene99139:intron | 30.0% | |
| TTAAATTGAAGTTGCGGTTA+TGG | - | chr8.2:82774104-82774123 | MS.gene99139:intron | 30.0% | |
| TTATTTGAATGGTAGGTATG+GGG | - | chr8.2:82773857-82773876 | MS.gene99139:intron | 30.0% | |
| !! | GTGAACATTCTGAAATATGA+AGG | - | chr8.2:82774770-82774789 | MS.gene99139:CDS | 30.0% |
| !!! | CTGCAGATCTTTTAAAATCT+TGG | - | chr8.2:82774393-82774412 | MS.gene99139:intron | 30.0% |
| !!! | GAAAGTGACGTTTTTTATGA+TGG | - | chr8.2:82773707-82773726 | MS.gene99139:intron | 30.0% |
| AAGCAACTCAAAAGTTACAG+AGG | + | chr8.2:82775178-82775197 | None:intergenic | 35.0% | |
| AATTGGATGATCATGAGACA+TGG | + | chr8.2:82774548-82774567 | None:intergenic | 35.0% | |
| AGCAACTCAAAAGTTACAGA+GGG | + | chr8.2:82775177-82775196 | None:intergenic | 35.0% | |
| AGTAGAGATCCTTGATATTG+CGG | - | chr8.2:82774262-82774281 | MS.gene99139:intron | 35.0% | |
| ATCTTAATACTCCAATCCCT+TGG | + | chr8.2:82773531-82773550 | None:intergenic | 35.0% | |
| ATTGTGGAAGAGCTTAAGAT+GGG | - | chr8.2:82775201-82775220 | MS.gene99139:CDS | 35.0% | |
| GCTTTCTTCTATTTGGATAC+AGG | - | chr8.2:82775256-82775275 | MS.gene99139:CDS | 35.0% | |
| GTGTTAGATAGGAGTTAGTT+TGG | - | chr8.2:82774423-82774442 | MS.gene99139:intron | 35.0% | |
| TATTGTGGAAGAGCTTAAGA+TGG | - | chr8.2:82775200-82775219 | MS.gene99139:CDS | 35.0% | |
| TCAAATAATCCACAGCATCA+GGG | + | chr8.2:82773845-82773864 | None:intergenic | 35.0% | |
| TCATACAAATTCAACGTCCT+CGG | + | chr8.2:82773792-82773811 | None:intergenic | 35.0% | |
| TGTGTATTGGACATTCATGT+TGG | - | chr8.2:82775123-82775142 | MS.gene99139:CDS | 35.0% | |
| TTCAAATAATCCACAGCATC+AGG | + | chr8.2:82773846-82773865 | None:intergenic | 35.0% | |
| ! | CTGTGGATTATTTGAATGGT+AGG | - | chr8.2:82773850-82773869 | MS.gene99139:intron | 35.0% |
| ! | CTTGGTTGCTTTCTTCTATT+TGG | - | chr8.2:82775249-82775268 | MS.gene99139:CDS | 35.0% |
| ! | GATGCTGTGGATTATTTGAA+TGG | - | chr8.2:82773846-82773865 | MS.gene99139:intron | 35.0% |
| ! | TGTTGGCTAGTAGGAATATT+GGG | - | chr8.2:82773748-82773767 | MS.gene99139:intron | 35.0% |
| ! | TTGTTGGCTAGTAGGAATAT+TGG | - | chr8.2:82773747-82773766 | MS.gene99139:intron | 35.0% |
| !! | TGTGTAGTCTTATTTGTCAC+TGG | - | chr8.2:82774954-82774973 | MS.gene99139:CDS | 35.0% |
| !!! | AGTGACGTTTTTTATGATGG+AGG | - | chr8.2:82773710-82773729 | MS.gene99139:intron | 35.0% |
| !!! | GTTTTTTATGATGGAGGTGA+AGG | - | chr8.2:82773716-82773735 | MS.gene99139:intron | 35.0% |
| AATACTCCAATCCCTTGGTT+TGG | + | chr8.2:82773526-82773545 | None:intergenic | 40.0% | |
| AGATACCAGCTCCAAAGTTA+AGG | + | chr8.2:82774986-82775005 | None:intergenic | 40.0% | |
| ATACTCCAATCCCTTGGTTT+GGG | + | chr8.2:82773525-82773544 | None:intergenic | 40.0% | |
| CAAATAATCCACAGCATCAG+GGG | + | chr8.2:82773844-82773863 | None:intergenic | 40.0% | |
| CCCTACAACCAAAAGAAAAC+CGG | - | chr8.2:82773438-82773457 | MS.gene99139:intron | 40.0% | |
| GAAGACGAAGGAGTTTATTG+CGG | - | chr8.2:82773653-82773672 | MS.gene99139:intron | 40.0% | |
| GACAACATCAAAGACCGTTA+TGG | - | chr8.2:82774321-82774340 | MS.gene99139:intron | 40.0% | |
| GACAGTGAACAAGATGATGA+TGG | - | chr8.2:82773879-82773898 | MS.gene99139:intron | 40.0% | |
| GATGTTGTGATCACAAATGC+GGG | - | chr8.2:82774211-82774230 | MS.gene99139:intron | 40.0% | |
| GCAACTCAAAAGTTACAGAG+GGG | + | chr8.2:82775176-82775195 | None:intergenic | 40.0% | |
| GCGTGCAATTGTTGATATGT+TGG | - | chr8.2:82774129-82774148 | MS.gene99139:intron | 40.0% | |
| GGATGTTGTGATCACAAATG+CGG | - | chr8.2:82774210-82774229 | MS.gene99139:intron | 40.0% | |
| TATTGCGGCTATGAAACGAT+GGG | - | chr8.2:82773668-82773687 | MS.gene99139:intron | 40.0% | |
| TGGTGATTATGTCGAACAAG+AGG | - | chr8.2:82773899-82773918 | MS.gene99139:intron | 40.0% | |
| TTATTGCGGCTATGAAACGA+TGG | - | chr8.2:82773667-82773686 | MS.gene99139:intron | 40.0% | |
| TTGATGTTGTCAAAGACGCA+AGG | + | chr8.2:82774312-82774331 | None:intergenic | 40.0% | |
| TTGTGCATGTGTGTGTGTAT+TGG | - | chr8.2:82775110-82775129 | MS.gene99139:CDS | 40.0% | |
| ! | AAAAACGTCACTTTCTCCGT+CGG | + | chr8.2:82773702-82773721 | None:intergenic | 40.0% |
| !! | ACTGGCTTTAGCCTTAACTT+TGG | - | chr8.2:82774972-82774991 | MS.gene99139:CDS | 40.0% |
| !! | AGAAAGTGTTGTTGGCTAGT+AGG | - | chr8.2:82773739-82773758 | MS.gene99139:intron | 40.0% |
| !! | CCGGTTTTCTTTTGGTTGTA+GGG | + | chr8.2:82773441-82773460 | None:intergenic | 40.0% |
| !! | GGACATTCATGTTGGTAGTT+GGG | - | chr8.2:82775131-82775150 | MS.gene99139:CDS | 40.0% |
| !! | TGGACATTCATGTTGGTAGT+TGG | - | chr8.2:82775130-82775149 | MS.gene99139:CDS | 40.0% |
| !! | TTTAGCCTTAACTTTGGAGC+TGG | - | chr8.2:82774978-82774997 | MS.gene99139:CDS | 40.0% |
| AAAGGTCTGCGACTGAGATT+TGG | + | chr8.2:82774359-82774378 | None:intergenic | 45.0% | |
| AACTGCAATTGAAGCCACAC+AGG | + | chr8.2:82774288-82774307 | None:intergenic | 45.0% | |
| AAGGTCTGCGACTGAGATTT+GGG | + | chr8.2:82774358-82774377 | None:intergenic | 45.0% | |
| AGATGGTACTATTGTGGTCG+TGG | - | chr8.2:82774160-82774179 | MS.gene99139:intron | 45.0% | |
| AGTTTGCGGATGAGTTTGAG+GGG | - | chr8.2:82773625-82773644 | MS.gene99139:intron | 45.0% | |
| ATTGCGGCTATGAAACGATG+GGG | - | chr8.2:82773669-82773688 | MS.gene99139:intron | 45.0% | |
| GAAGTAGAGGATAGCCAAGA+AGG | - | chr8.2:82773921-82773940 | MS.gene99139:intron | 45.0% | |
| GACCTTCAAAACAAACGTCG+CGG | - | chr8.2:82773366-82773385 | MS.gene99139:intron | 45.0% | |
| GAGTTTGCGGATGAGTTTGA+GGG | - | chr8.2:82773624-82773643 | MS.gene99139:intron | 45.0% | |
| TGTCGAACAAGAGGAAGTAG+AGG | - | chr8.2:82773908-82773927 | MS.gene99139:intron | 45.0% | |
| TTGTGATCACAAATGCGGGT+GGG | - | chr8.2:82774215-82774234 | MS.gene99139:intron | 45.0% | |
| ! | TACTCCAATCCCTTGGTTTG+GGG | + | chr8.2:82773524-82773543 | None:intergenic | 45.0% |
| ! | TTGGGCATTGCGTGTTAGAT+AGG | - | chr8.2:82774412-82774431 | MS.gene99139:intron | 45.0% |
| !! | GCCGGTTTTCTTTTGGTTGT+AGG | + | chr8.2:82773442-82773461 | None:intergenic | 45.0% |
| !! | GGTGAAGGAGAAAGTGTTGT+TGG | - | chr8.2:82773731-82773750 | MS.gene99139:intron | 45.0% |
| !!! | GACGTTTGTTTTGAAGGTCG+TGG | + | chr8.2:82773365-82773384 | None:intergenic | 45.0% |
| !!! | GATTTTTGGCCCCAAACCAA+GGG | - | chr8.2:82773512-82773531 | MS.gene99139:intron | 45.0% |
| !!! | GTTTTGAAGGTCGTGGATGA+TGG | + | chr8.2:82773358-82773377 | None:intergenic | 45.0% |
| !!! | TGATTTTTGGCCCCAAACCA+AGG | - | chr8.2:82773511-82773530 | MS.gene99139:intron | 45.0% |
| AGGTCTGCGACTGAGATTTG+GGG | + | chr8.2:82774357-82774376 | None:intergenic | 50.0% | |
| CACAAATGCGGGTGGGATAA+GGG | - | chr8.2:82774222-82774241 | MS.gene99139:intron | 50.0% | |
| GGAGTTTGCGGATGAGTTTG+AGG | - | chr8.2:82773623-82773642 | MS.gene99139:intron | 50.0% | |
| GGCTATGAAACGATGGGGAT+TGG | - | chr8.2:82773674-82773693 | MS.gene99139:intron | 50.0% | |
| GGGGGGCTACATAACCATAA+CGG | + | chr8.2:82774338-82774357 | None:intergenic | 50.0% | |
| GGTGGCGAGTTTGCAAGAAA+TGG | + | chr8.2:82773238-82773257 | None:intergenic | 50.0% | |
| GTTGTGATCACAAATGCGGG+TGG | - | chr8.2:82774214-82774233 | MS.gene99139:intron | 50.0% | |
| TCACAAATGCGGGTGGGATA+AGG | - | chr8.2:82774221-82774240 | MS.gene99139:intron | 50.0% | |
| TCCTTCTCCGGCGAGAAAAT+CGG | - | chr8.2:82773270-82773289 | MS.gene99139:intron | 50.0% | |
| TGTTCTTACCCCTGATGCTG+TGG | - | chr8.2:82773833-82773852 | MS.gene99139:intron | 50.0% | |
| !! | ACGCAGAAGAAAGTGCCGAT+GGG | - | chr8.2:82775284-82775303 | MS.gene99139:CDS | 50.0% |
| !! | CGTTGAAGATTTTGACGCCG+AGG | - | chr8.2:82773772-82773791 | MS.gene99139:intron | 50.0% |
| !!! | TGATTCGCCGATTTTCTCGC+CGG | + | chr8.2:82773280-82773299 | None:intergenic | 50.0% |
| !!! | TGCCGCGACGTTTGTTTTGA+AGG | + | chr8.2:82773371-82773390 | None:intergenic | 50.0% |
| ACGATGGGGATTGGATCCGA+CGG | - | chr8.2:82773683-82773702 | MS.gene99139:intron | 55.0% | |
| CCAAAAATCACACCACCGCC+GGG | + | chr8.2:82773501-82773520 | None:intergenic | 55.0% | |
| CCACACAGGCCGCAATATCA+AGG | + | chr8.2:82774274-82774293 | None:intergenic | 55.0% | |
| CCTTGATATTGCGGCCTGTG+TGG | - | chr8.2:82774271-82774290 | MS.gene99139:intron | 55.0% | |
| GAGGCTTGCGATTTCGACTG+CGG | - | chr8.2:82773566-82773585 | MS.gene99139:intron | 55.0% | |
| GCCAAAAATCACACCACCGC+CGG | + | chr8.2:82773502-82773521 | None:intergenic | 55.0% | |
| GGTCTGCGACTGAGATTTGG+GGG | + | chr8.2:82774356-82774375 | None:intergenic | 55.0% | |
| GGTGAATACGGTTGTGGTGG+AGG | - | chr8.2:82773602-82773621 | MS.gene99139:intron | 55.0% | |
| GTCTGCGACTGAGATTTGGG+GGG | + | chr8.2:82774355-82774374 | None:intergenic | 55.0% | |
| TCGGCACTTTCTTCTGCGTC+TGG | + | chr8.2:82775283-82775302 | None:intergenic | 55.0% | |
| TCTGACTTCGGCGCGTGTTA+GGG | + | chr8.2:82773403-82773422 | None:intergenic | 55.0% | |
| TCTGCCACCACCTCTGACTT+CGG | + | chr8.2:82773415-82773434 | None:intergenic | 55.0% | |
| TGAGGGGAATGCGAAGACGA+AGG | - | chr8.2:82773641-82773660 | MS.gene99139:intron | 55.0% | |
| TTGGCCCCAAACCAAGGGAT+TGG | - | chr8.2:82773517-82773536 | MS.gene99139:intron | 55.0% | |
| ! | GGTTGTGGTGGAGGAGTTTG+CGG | - | chr8.2:82773611-82773630 | MS.gene99139:intron | 55.0% |
| ! | TTTTCTCGCCGGAGAAGGAG+AGG | + | chr8.2:82773269-82773288 | None:intergenic | 55.0% |
| !! | CGCAGAAGAAAGTGCCGATG+GGG | - | chr8.2:82775285-82775304 | MS.gene99139:CDS | 55.0% |
| !! | GACGCAGAAGAAAGTGCCGA+TGG | - | chr8.2:82775283-82775302 | MS.gene99139:CDS | 55.0% |
| !! | GTGCTCGGCCGGTTTTCTTT+TGG | + | chr8.2:82773449-82773468 | None:intergenic | 55.0% |
| AAAACCGGCCGAGCACGTCA+GGG | - | chr8.2:82773453-82773472 | MS.gene99139:intron | 60.0% | |
| AAATCACACCACCGCCGGGT+CGG | + | chr8.2:82773497-82773516 | None:intergenic | 60.0% | |
| AGTCGTACACCTCTCCGACC+CGG | - | chr8.2:82773480-82773499 | MS.gene99139:intron | 60.0% | |
| CTAACACGCGCCGAAGTCAG+AGG | - | chr8.2:82773402-82773421 | MS.gene99139:intron | 60.0% | |
| CTCCCACTCCTCTCCTTCTC+CGG | - | chr8.2:82773258-82773277 | MS.gene99139:intron | 60.0% | |
| CTCTGACTTCGGCGCGTGTT+AGG | + | chr8.2:82773404-82773423 | None:intergenic | 60.0% | |
| GACTGGAACCCTGACGTGCT+CGG | + | chr8.2:82773464-82773483 | None:intergenic | 60.0% | |
| GCTTGCGATTTCGACTGCGG+TGG | - | chr8.2:82773569-82773588 | MS.gene99139:intron | 60.0% | |
| GGAGAAGGAGAGGAGTGGGA+GGG | + | chr8.2:82773259-82773278 | None:intergenic | 60.0% | |
| GGCGGTGAATACGGTTGTGG+TGG | - | chr8.2:82773599-82773618 | MS.gene99139:intron | 60.0% | |
| TGCGGCGGTGAATACGGTTG+TGG | - | chr8.2:82773596-82773615 | MS.gene99139:intron | 60.0% | |
| ! | CCCGGCGGTGGTGTGATTTT+TGG | - | chr8.2:82773498-82773517 | MS.gene99139:intron | 60.0% |
| ! | GAAGGTCGTGGATGATGGCG+CGG | + | chr8.2:82773353-82773372 | None:intergenic | 60.0% |
| !! | GCCGATTTTCTCGCCGGAGA+AGG | + | chr8.2:82773274-82773293 | None:intergenic | 60.0% |
| ACACGCGCCGAAGTCAGAGG+TGG | - | chr8.2:82773405-82773424 | MS.gene99139:intron | 65.0% | |
| CGCCGGAGAAGGAGAGGAGT+GGG | + | chr8.2:82773263-82773282 | None:intergenic | 65.0% | |
| CGGAGAAGGAGAGGAGTGGG+AGG | + | chr8.2:82773260-82773279 | None:intergenic | 65.0% | |
| GAAAACCGGCCGAGCACGTC+AGG | - | chr8.2:82773452-82773471 | MS.gene99139:intron | 65.0% | |
| GAAGGAGAGGAGTGGGAGGG+TGG | + | chr8.2:82773256-82773275 | None:intergenic | 65.0% | |
| GACTTCGGCGCGTGTTAGGG+TGG | + | chr8.2:82773400-82773419 | None:intergenic | 65.0% | |
| GGCGAGTGCGGCGGTGAATA+CGG | - | chr8.2:82773590-82773609 | MS.gene99139:intron | 65.0% | |
| TCGCCGGAGAAGGAGAGGAG+TGG | + | chr8.2:82773264-82773283 | None:intergenic | 65.0% | |
| TTCGACTGCGGTGGCGAGTG+CGG | - | chr8.2:82773578-82773597 | MS.gene99139:intron | 65.0% | |
| TTCGGCGCGTGTTAGGGTGG+AGG | + | chr8.2:82773397-82773416 | None:intergenic | 65.0% | |
| ! | GATGATGGCGCGGTGGACGA+CGG | + | chr8.2:82773343-82773362 | None:intergenic | 65.0% |
| ! | GGGTCGGAGAGGTGTACGAC+TGG | + | chr8.2:82773481-82773500 | None:intergenic | 65.0% |
| ACGACGGCGCGTGAGGTGGA+AGG | + | chr8.2:82773327-82773346 | None:intergenic | 70.0% | |
| ACGGCGCGTGAGGTGGAAGG+AGG | + | chr8.2:82773324-82773343 | None:intergenic | 70.0% | |
| CGCGCCGAAGTCAGAGGTGG+TGG | - | chr8.2:82773408-82773427 | MS.gene99139:intron | 70.0% | |
| CGGCGCGTGAGGTGGAAGGA+GGG | + | chr8.2:82773323-82773342 | None:intergenic | 70.0% | |
| CGTACACCTCTCCGACCCGG+CGG | - | chr8.2:82773483-82773502 | MS.gene99139:intron | 70.0% | |
| GGAACCCTGACGTGCTCGGC+CGG | + | chr8.2:82773460-82773479 | None:intergenic | 70.0% | |
| GGCGCGTGAGGTGGAAGGAG+GGG | + | chr8.2:82773322-82773341 | None:intergenic | 70.0% | |
| GGCGCGTGTTAGGGTGGAGG+CGG | + | chr8.2:82773394-82773413 | None:intergenic | 70.0% | |
| ! | GGTCGTGGATGATGGCGCGG+TGG | + | chr8.2:82773350-82773369 | None:intergenic | 70.0% |
| ACACCACCGCCGGGTCGGAG+AGG | + | chr8.2:82773492-82773511 | None:intergenic | 75.0% | |
| ACACCTCTCCGACCCGGCGG+TGG | - | chr8.2:82773486-82773505 | MS.gene99139:intron | 75.0% | |
| GACTGCGGTGGCGAGTGCGG+CGG | - | chr8.2:82773581-82773600 | MS.gene99139:intron | 75.0% | |
| GTGGACGACGGCGCGTGAGG+TGG | + | chr8.2:82773331-82773350 | None:intergenic | 75.0% | |
| ! | GCGGTGGACGACGGCGCGTG+AGG | + | chr8.2:82773334-82773353 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 82773102 | 82775315 | 82773102 | ID=MS.gene99139 |
| chr8.2 | mRNA | 82773102 | 82775315 | 82773102 | ID=MS.gene99139.t1;Parent=MS.gene99139 |
| chr8.2 | exon | 82774475 | 82775315 | 82774475 | ID=MS.gene99139.t1.exon1;Parent=MS.gene99139.t1 |
| chr8.2 | CDS | 82774475 | 82775315 | 82774475 | ID=cds.MS.gene99139.t1;Parent=MS.gene99139.t1 |
| chr8.2 | exon | 82773102 | 82773139 | 82773102 | ID=MS.gene99139.t1.exon2;Parent=MS.gene99139.t1 |
| chr8.2 | CDS | 82773102 | 82773139 | 82773102 | ID=cds.MS.gene99139.t1;Parent=MS.gene99139.t1 |
| Gene Sequence |
| Protein sequence |
