AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68963


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68963.t1 MTR_4g132500 98.854 349 4 0 1 349 298 646 0.0 717
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68963.t1 AT4G04350 75.575 348 85 0 1 348 301 648 0.0 569

Find 0 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATATTAAATGATAT+AGG - 32679:2377-2396 MS.gene68963:intergenic 10.0%
!! AAAATTTAATAGTGAGATTT+CGG - 32679:1865-1884 MS.gene68963:intergenic 15.0%
!! TTAAAATCCTTCTAATAAAT+AGG - 32679:849-868 MS.gene68963:intergenic 15.0%
!!! ATCTATAGATTGATTATTTT+AGG + 32679:2183-2202 MS.gene68963:intron 15.0%
!!! TAACTATGTTTTTTTATGTA+TGG - 32679:1888-1907 MS.gene68963:intergenic 15.0%
!!! TCGTTCTTTTATATTTTTTT+TGG + 32679:2611-2630 MS.gene68963:intron 15.0%
!!! TCTTTTATATTTTTTTTGGA+TGG + 32679:2615-2634 MS.gene68963:intron 15.0%
!!! TTTATTAGAAGGATTTTAAT+CGG + 32679:850-869 MS.gene68963:intron 15.0%
!! AAATTCATCAAATACGTTAA+TGG + 32679:1345-1364 MS.gene68963:CDS 20.0%
!! AATTCATCAAATACGTTAAT+GGG + 32679:1346-1365 MS.gene68963:CDS 20.0%
!! AGTTTCCTTATAAATTAGAA+CGG - 32679:2429-2448 MS.gene68963:intergenic 20.0%
!! CCATAAAATTTCAAGAATAT+AGG - 32679:2473-2492 MS.gene68963:intergenic 20.0%
!! TAATTTATAAGGAAACTGAA+AGG + 32679:2432-2451 MS.gene68963:intron 20.0%
!! TACACATTTAGAAATGTTAA+TGG - 32679:2506-2525 MS.gene68963:intergenic 20.0%
!!! AATAAGCTTGTTCATTTTAT+TGG + 32679:1472-1491 MS.gene68963:intron 20.0%
!!! ACTTTGTTATCAAGATATAA+TGG + 32679:1784-1803 MS.gene68963:intron 20.0%
!!! AGAGAAAAACAATTTTAAAG+TGG - 32679:3096-3115 MS.gene68963:intergenic 20.0%
!!! CCTATATTCTTGAAATTTTA+TGG + 32679:2470-2489 MS.gene68963:intron 20.0%
!!! GAGAAAAACAATTTTAAAGT+GGG - 32679:3095-3114 MS.gene68963:intergenic 20.0%
! AACATTGTCTTGATATGAAA+GGG - 32679:2072-2091 MS.gene68963:intergenic 25.0%
! AATTGAATCATTGTCTTATC+TGG + 32679:2107-2126 MS.gene68963:intron 25.0%
! ATAAGCCGTTCTAATTTATA+AGG + 32679:2421-2440 MS.gene68963:intron 25.0%
! ATGAAACCAGAATATAATTG+TGG + 32679:1154-1173 MS.gene68963:intron 25.0%
! ATGCCAAAGAAATGATAAAA+AGG - 32679:1820-1839 MS.gene68963:intergenic 25.0%
! ATTCATCAAATACGTTAATG+GGG + 32679:1347-1366 MS.gene68963:CDS 25.0%
! ATTGAATCATTGTCTTATCT+GGG + 32679:2108-2127 MS.gene68963:intron 25.0%
! GACAATGATTCAATTAGAAA+AGG - 32679:2102-2121 MS.gene68963:intergenic 25.0%
! TAACATTGTCTTGATATGAA+AGG - 32679:2073-2092 MS.gene68963:intergenic 25.0%
! TATAAGAAACCAGCAAAAAA+TGG - 32679:3034-3053 MS.gene68963:intergenic 25.0%
! TATCAAGATATAATGGCAAT+TGG + 32679:1791-1810 MS.gene68963:intron 25.0%
!! ATGCCTTTTTATCATTTCTT+TGG + 32679:1814-1833 MS.gene68963:intron 25.0%
!! TTTTATCATTTCTTTGGCAT+TGG + 32679:1820-1839 MS.gene68963:intron 25.0%
!!! AAAAACAATTTTAAAGTGGG+CGG - 32679:3092-3111 MS.gene68963:intergenic 25.0%
!!! TAAAATTGTTTTTCTCTTGC+AGG + 32679:3099-3118 MS.gene68963:intron 25.0%
!!! TATTGGAACGTTGTTTTTTA+TGG + 32679:1489-1508 MS.gene68963:intron 25.0%
AAAAGAACGATTACAATGAG+AGG - 32679:2601-2620 MS.gene68961:intergenic 30.0%
AAAGAACGATTACAATGAGA+GGG - 32679:2600-2619 MS.gene68963:intergenic 30.0%
AAATACATTGTTCTTCCTTC+AGG + 32679:1525-1544 MS.gene68963:intron 30.0%
AATATAGGACCTATTACTAC+AGG - 32679:2458-2477 MS.gene68963:intergenic 30.0%
ACATTGTCTTGATATGAAAG+GGG - 32679:2071-2090 MS.gene68963:intergenic 30.0%
AGAACCTAGCATATAGTAAA+TGG - 32679:3175-3194 MS.gene68963:intergenic 30.0%
AGCTAAGAAAACAAAAACAG+AGG - 32679:2570-2589 MS.gene68963:intergenic 30.0%
ATCCAATTCAGGTAGAATAA+GGG - 32679:1668-1687 MS.gene68963:intergenic 30.0%
ATTTACTATATGCTAGGTTC+TGG + 32679:3174-3193 MS.gene68963:CDS 30.0%
CAGTAACCACAATTATATTC+TGG - 32679:1163-1182 MS.gene68963:intergenic 30.0%
CATAAATCTCAAATAGTACC+TGG - 32679:2919-2938 MS.gene68963:intergenic 30.0%
GAATATAATTGTGGTTACTG+TGG + 32679:1163-1182 MS.gene68963:intron 30.0%
GCAAAGTAACGATTTGTATT+TGG - 32679:1756-1775 MS.gene68963:intergenic 30.0%
TATGCAAAAAATCCAGCAAA+CGG + 32679:1002-1021 MS.gene68963:CDS 30.0%
TCATCAATTTCCTATTTGCT+TGG + 32679:725-744 MS.gene68963:intron 30.0%
TCCTTCTAATAAATAGGCAA+CGG - 32679:843-862 MS.gene68963:intergenic 30.0%
TGATTCAATTAGAAAAGGAC+CGG - 32679:2097-2116 MS.gene68963:intergenic 30.0%
TTCTCCATTTACTATATGCT+AGG + 32679:3168-3187 MS.gene68963:CDS 30.0%
TTGCTAAATATTCCATGACA+TGG + 32679:1111-1130 MS.gene68963:intron 30.0%
! CAGGTACTATTTGAGATTTA+TGG + 32679:2917-2936 MS.gene68963:intron 30.0%
! TTGGATTTTTGCATTCTTGA+TGG + 32679:557-576 MS.gene68963:CDS 30.0%
!! ACCAGTTCTTTGGAATTATT+TGG - 32679:2945-2964 MS.gene68963:intergenic 30.0%
!! ACGGCTTATATTTTTGAATG+AGG - 32679:2410-2429 MS.gene68963:intergenic 30.0%
!! AGCTCTAAAAGTCATTGATT+GGG + 32679:1402-1421 MS.gene68963:CDS 30.0%
!! CCAGTTCTTTGGAATTATTT+GGG - 32679:2944-2963 MS.gene68963:intergenic 30.0%
!! TGGTTGATAAGGAAAAAGAA+AGG + 32679:2961-2980 MS.gene68963:CDS 30.0%
!! TTCTTAGGGATTTTAATCTC+AGG + 32679:890-909 MS.gene68963:intron 30.0%
!!! AAAACAATTTTAAAGTGGGC+GGG - 32679:3091-3110 MS.gene68963:intergenic 30.0%
AACATGTTCCAGATTGATAC+TGG - 32679:3220-3239 MS.gene68963:intergenic 35.0%
AAGAACGATTACAATGAGAG+GGG - 32679:2599-2618 MS.gene68963:intergenic 35.0%
AAGTGGAAATGGAAAGAGAA+AGG + 32679:1432-1451 MS.gene68963:CDS 35.0%
AATATGACATTCCTATTCGC+TGG + 32679:1254-1273 MS.gene68963:CDS 35.0%
AATCAAGACCACAAAACTAC+TGG - 32679:2813-2832 MS.gene68963:intergenic 35.0%
AATCTCAAATAGTACCTGGA+AGG - 32679:2915-2934 MS.gene68963:intergenic 35.0%
AATGGATAACGAGTAACTAC+TGG - 32679:3016-3035 MS.gene68963:intergenic 35.0%
AGAACTTATAGTCACACTAG+TGG + 32679:2268-2287 MS.gene68963:intron 35.0%
AGATTACTGTGTATACTACC+AGG + 32679:603-622 MS.gene68963:CDS 35.0%
AGTACCTGGAAGGATATTAA+AGG - 32679:2905-2924 MS.gene68963:intergenic 35.0%
ATATGACATTCCTATTCGCT+GGG + 32679:1255-1274 MS.gene68963:CDS 35.0%
ATGCAAAAAATCCAGCAAAC+GGG + 32679:1003-1022 MS.gene68963:CDS 35.0%
ATGCAAATGCAAATGCAATC+AGG + 32679:2153-2172 MS.gene68963:intron 35.0%
ATGTCCTTTAATATCCTTCC+AGG + 32679:2898-2917 MS.gene68963:intron 35.0%
ATTGATTGGGCAGAAAAAAG+TGG + 32679:1415-1434 MS.gene68963:CDS 35.0%
CATATCAAGACAATGTTACC+CGG + 32679:2075-2094 MS.gene68963:intron 35.0%
CATCCAATTCAGGTAGAATA+AGG - 32679:1669-1688 MS.gene68963:intergenic 35.0%
CCCAAATAATTCCAAAGAAC+TGG + 32679:2941-2960 MS.gene68963:CDS 35.0%
CTAACACAAACCAAGCAAAT+AGG - 32679:738-757 MS.gene68963:intergenic 35.0%
GATTCAATTAGAAAAGGACC+GGG - 32679:2096-2115 MS.gene68963:intergenic 35.0%
GGAAATCAATGATGAGATCA+AGG - 32679:787-806 MS.gene68963:intergenic 35.0%
GGAGAAAAATCATCCAATTC+AGG - 32679:1679-1698 MS.gene68963:intergenic 35.0%
GTTCATGCTGGTAAGTTATT+GGG + 32679:2720-2739 MS.gene68963:intron 35.0%
TCAGGTGAACTACAAGTTAA+GGG + 32679:1543-1562 MS.gene68963:intron 35.0%
TCCAATTCAGGTAGAATAAG+GGG - 32679:1667-1686 MS.gene68963:intergenic 35.0%
TCCGTTGCCTATTTATTAGA+AGG + 32679:839-858 MS.gene68963:intron 35.0%
TTAATGGGGCTTGACATTAA+TGG + 32679:1361-1380 MS.gene68963:CDS 35.0%
TTCAGGTGAACTACAAGTTA+AGG + 32679:1542-1561 MS.gene68963:intron 35.0%
TTCCTTATCAACCAGTTCTT+TGG - 32679:2955-2974 MS.gene68963:intergenic 35.0%
TTGTGTTAGTTACTTGGTTG+TGG + 32679:749-768 MS.gene68963:intron 35.0%
! AGTATCAATCTGGAACATGT+TGG + 32679:3219-3238 MS.gene68963:CDS 35.0%
! ATTTGGTTCCAGTATCAATC+TGG + 32679:3209-3228 MS.gene68963:CDS 35.0%
! CTTCCTGTGACAAGATTTTA+GGG - 32679:2246-2265 MS.gene68963:intergenic 35.0%
! GTTACTGATCTTGATTTGAC+TGG + 32679:1904-1923 MS.gene68963:intron 35.0%
! GTTTTTCTCTTGCAGGTATT+GGG + 32679:3106-3125 MS.gene68963:intron 35.0%
! TCTTCCTGTGACAAGATTTT+AGG - 32679:2247-2266 MS.gene68963:intergenic 35.0%
! TGTTTTTCTCTTGCAGGTAT+TGG + 32679:3105-3124 MS.gene68963:intron 35.0%
! TTCCAAAGAACTGGTTGATA+AGG + 32679:2950-2969 MS.gene68963:CDS 35.0%
!! AAGGATTTTAATCGGAGACA+AGG + 32679:858-877 MS.gene68963:intron 35.0%
!! CAGCTCTAAAAGTCATTGAT+TGG + 32679:1401-1420 MS.gene68963:CDS 35.0%
!! CTTGGTTTGTGTTAGTTACT+TGG + 32679:743-762 MS.gene68963:intron 35.0%
!! TTAACTTGTAGTTCACCTGA+AGG - 32679:1543-1562 MS.gene68963:intergenic 35.0%
!! TTTTGGATGGTACCACTTTT+AGG + 32679:2628-2647 MS.gene68963:intron 35.0%
!! TTTTTCTCTTGCAGGTATTG+GGG + 32679:3107-3126 MS.gene68963:intron 35.0%
!!! AAACAATTTTAAAGTGGGCG+GGG - 32679:3090-3109 MS.gene68963:intergenic 35.0%
!!! ACTCGTTATCCATTTTTTGC+TGG + 32679:3022-3041 MS.gene68963:intron 35.0%
!!! TAGTTTTGTGGTCTTGATTC+TGG + 32679:2814-2833 MS.gene68963:intron 35.0%
!!! TTTTGCATTCTTGATGGTGA+TGG + 32679:563-582 MS.gene68963:CDS 35.0%
AAACAAATACCATGCCACAG+TGG + 32679:2693-2712 MS.gene68963:CDS 40.0%
AAACCTACCAAACTTGAACC+AGG + 32679:1940-1959 MS.gene68963:intron 40.0%
AACAAATACCATGCCACAGT+GGG + 32679:2694-2713 MS.gene68963:CDS 40.0%
AACCTACCAAACTTGAACCA+GGG + 32679:1941-1960 MS.gene68963:intron 40.0%
AAGACCACAGATAGGTTATC+CGG + 32679:2653-2672 MS.gene68963:CDS 40.0%
ACAAGGAGATGGTGATTCTT+AGG + 32679:875-894 MS.gene68963:intron 40.0%
ACACCAGACTGTTATCATGT+CGG - 32679:2027-2046 MS.gene68963:intergenic 40.0%
ACATAATCTGCCACCCATAT+CGG - 32679:1038-1057 MS.gene68963:intergenic 40.0%
ACTCCCTAAAATCTTGTCAC+AGG + 32679:2240-2259 MS.gene68963:intron 40.0%
ACTGAAAGGCCTGTAGTAAT+AGG + 32679:2446-2465 MS.gene68963:intron 40.0%
AGTCGATGTATAGTAGCAGA+GGG - 32679:1990-2009 MS.gene68963:intergenic 40.0%
ATGATAACAGTCTGGTGTAG+TGG + 32679:2029-2048 MS.gene68963:intron 40.0%
ATTCCATGACATGGTCAATG+TGG + 32679:1120-1139 MS.gene68963:intron 40.0%
CAAAAAAGAGTGACCTTGAG+AGG + 32679:937-956 MS.gene68963:CDS 40.0%
CAAATGCAAATGCAATCAGG+TGG + 32679:2156-2175 MS.gene68963:intron 40.0%
CAAGGAGATGGTGATTCTTA+GGG + 32679:876-895 MS.gene68963:intron 40.0%
CACCAACATACACATCAACA+GGG - 32679:3133-3152 MS.gene68963:intergenic 40.0%
CCACAGACAGGTTAAATTCA+TGG - 32679:3268-3287 MS.gene68963:intergenic 40.0%
CCATGAATTTAACCTGTCTG+TGG + 32679:3265-3284 MS.gene68963:CDS 40.0%
GAAAAGACTGGAGTCTTTAC+TGG + 32679:975-994 MS.gene68963:CDS 40.0%
GGTTCATGCTGGTAAGTTAT+TGG + 32679:2719-2738 MS.gene68963:intron 40.0%
TAGTCGATGTATAGTAGCAG+AGG - 32679:1991-2010 MS.gene68963:intergenic 40.0%
TCTGGCACAAGGTTTGTATT+TGG + 32679:3192-3211 MS.gene68963:CDS 40.0%
TGAACTACAAGTTAAGGGAC+TGG + 32679:1548-1567 MS.gene68963:CDS 40.0%
TGCAAAAAATCCAGCAAACG+GGG + 32679:1004-1023 MS.gene68963:CDS 40.0%
TGGGCAGAAAAAAGTGGAAA+TGG + 32679:1421-1440 MS.gene68963:CDS 40.0%
TGTCATCCAAGAAGATGACA+GGG - 32679:1609-1628 MS.gene68963:intergenic 40.0%
TTATGGAACAGGAGCAATCA+TGG + 32679:1189-1208 MS.gene68963:CDS 40.0%
TTTAATCGGAGACAAGGAGA+TGG + 32679:864-883 MS.gene68963:intron 40.0%
TTTAGGTGAAGACCACAGAT+AGG + 32679:2645-2664 MS.gene68963:intron 40.0%
TTTGCAATAATGCCTTCACC+TGG - 32679:1328-1347 MS.gene68963:intergenic 40.0%
! ATGGGTGGCAGATTATGTTT+TGG + 32679:1040-1059 MS.gene68963:CDS 40.0%
! ATTTTTCTCCCACAGGAACA+GGG + 32679:1689-1708 MS.gene68963:CDS 40.0%
! GGAGTTTCAAGTACCTTCAA+AGG + 32679:2204-2223 MS.gene68963:intron 40.0%
! TCAGCGATGCTTTTATCATC+TGG - 32679:1289-1308 MS.gene68963:intergenic 40.0%
! TGGGTGGCAGATTATGTTTT+GGG + 32679:1041-1060 MS.gene68963:CDS 40.0%
! TTGGATGATTTTTCTCCCAC+AGG + 32679:1682-1701 MS.gene68963:CDS 40.0%
!! ACAAGATTTTAGGGAGTGCA+CGG - 32679:2237-2256 MS.gene68963:intergenic 40.0%
!! CATTCTTGATGGTGATGGAA+AGG + 32679:568-587 MS.gene68963:CDS 40.0%
!!! AACCAGGGCTGTACTTTTTT+TGG + 32679:1956-1975 MS.gene68963:intron 40.0%
!!! CTCAAGGTCACTCTTTTTTG+AGG - 32679:937-956 MS.gene68963:intergenic 40.0%
AAAGAGTGACCTTGAGAGGA+CGG + 32679:941-960 MS.gene68963:CDS 45.0%
AATTGGATAGGGAGGTCAGA+AGG + 32679:527-546 MS.gene68963:CDS 45.0%
ACCTATCCCTGTCATCTTCT+TGG + 32679:1600-1619 MS.gene68963:CDS 45.0%
ATTGGATAGGGAGGTCAGAA+GGG + 32679:528-547 MS.gene68963:CDS 45.0%
CATGCTGGTAAGTTATTGGG+AGG + 32679:2723-2742 MS.gene68963:intron 45.0%
CCACCAACATACACATCAAC+AGG - 32679:3134-3153 MS.gene68963:intergenic 45.0%
CCTGTTGATGTGTATGTTGG+TGG + 32679:3131-3150 MS.gene68963:CDS 45.0%
CTGTCATCCAAGAAGATGAC+AGG - 32679:1610-1629 MS.gene68963:intergenic 45.0%
CTGTGGTCTTCACCTAAAAG+TGG - 32679:2643-2662 MS.gene68963:intergenic 45.0%
GAGCTTCAGAAGGAAAAGAC+TGG + 32679:963-982 MS.gene68963:CDS 45.0%
GATGAGATCAAGGAATGCTC+TGG - 32679:777-796 MS.gene68963:intergenic 45.0%
GCAATTCAGTCTCATCCAGA+GGG - 32679:1645-1664 MS.gene68963:intergenic 45.0%
GCACGGAAAAGTTCCTTTGA+AGG - 32679:2220-2239 MS.gene68963:intergenic 45.0%
GCCCCTTATTCTACCTGAAT+TGG + 32679:1663-1682 MS.gene68963:CDS 45.0%
GTATTTGTTTCCCGAGTAGC+TGG - 32679:2683-2702 MS.gene68963:intergenic 45.0%
GTCATCTTCTTGGATGACAG+TGG + 32679:1610-1629 MS.gene68963:CDS 45.0%
GTTGCTCCAAAGATCGTATC+AGG - 32679:629-648 MS.gene68963:intergenic 45.0%
TAATCGCGTGAATCATGTGC+CGG - 32679:1220-1239 MS.gene68963:intergenic 45.0%
TACTGTGGCAGTTATGGAAC+AGG + 32679:1178-1197 MS.gene68963:intron 45.0%
TCACCACATTGACCATGTCA+TGG - 32679:1126-1145 MS.gene68963:intergenic 45.0%
TCCAAGAAGATGACAGGGAT+AGG - 32679:1604-1623 MS.gene68963:intergenic 45.0%
TCTTCCGGATAACCTATCTG+TGG - 32679:2660-2679 MS.gene68963:intergenic 45.0%
TGCAGAGAAATTGGATAGGG+AGG + 32679:519-538 MS.gene68963:CDS 45.0%
TGGACTTAGCCACAAAACCA+TGG - 32679:2793-2812 MS.gene68963:intergenic 45.0%
TGTGGTTACTGTGGCAGTTA+TGG + 32679:1172-1191 MS.gene68963:intron 45.0%
! AGCCAAAAAAAGTACAGCCC+TGG - 32679:1961-1980 MS.gene68963:intergenic 45.0%
! ATATGCTAGGTTCTGGCACA+AGG + 32679:3181-3200 MS.gene68963:CDS 45.0%
! GATTTTTCTCCCACAGGAAC+AGG + 32679:1688-1707 MS.gene68963:CDS 45.0%
! GGGTGGCAGATTATGTTTTG+GGG + 32679:1042-1061 MS.gene68963:CDS 45.0%
! TTTTTCTCCCACAGGAACAG+GGG + 32679:1690-1709 MS.gene68963:CDS 45.0%
!! GATAAAAGCATCGCTGAGTC+TGG + 32679:1292-1311 MS.gene68963:CDS 45.0%
!! GGCATTGGCACAAATGTTGA+TGG + 32679:1835-1854 MS.gene68963:intron 45.0%
!! GGCTAAGTCCAGTAGTTTTG+TGG + 32679:2802-2821 MS.gene68963:intron 45.0%
!!! GGTCACTCTTTTTTGAGGCA+AGG - 32679:932-951 MS.gene68963:intergenic 45.0%
!!! TAAGGGACTGGCTTTTTGCT+CGG + 32679:1560-1579 MS.gene68963:CDS 45.0%
!!! TGGCAGATTATGTTTTGGGG+AGG + 32679:1045-1064 MS.gene68963:CDS 45.0%
AAACCATGGCTTAGTGGCTC+AGG - 32679:2779-2798 MS.gene68963:intergenic 50.0%
AACCATGGCTTAGTGGCTCA+GGG - 32679:2778-2797 MS.gene68963:intergenic 50.0%
ACCAGGCCTGATACGATCTT+TGG + 32679:620-639 MS.gene68963:CDS 50.0%
ATCTGCCACCCATATCGGAA+TGG - 32679:1033-1052 MS.gene68963:intergenic 50.0%
GAGCCGACATGATAACAGTC+TGG + 32679:2021-2040 MS.gene68963:intron 50.0%
GCCACAAAACCATGGCTTAG+TGG - 32679:2785-2804 MS.gene68963:intergenic 50.0%
GGCAATTCAGTCTCATCCAG+AGG - 32679:1646-1665 MS.gene68963:intergenic 50.0%
GGCATTACAACCCAGCGAAT+AGG - 32679:1268-1287 MS.gene68963:intergenic 50.0%
GGCCCTGTTGATGTGTATGT+TGG + 32679:3128-3147 MS.gene68963:CDS 50.0%
TATCCGGAAGACCAGCTACT+CGG + 32679:2669-2688 MS.gene68963:CDS 50.0%
TCCAAAGATCGTATCAGGCC+TGG - 32679:624-643 MS.gene68963:intergenic 50.0%
TCTGGCTAAGGCAGTGTCTT+GGG + 32679:1720-1739 MS.gene68963:CDS 50.0%
TTGGATAGGGAGGTCAGAAG+GGG + 32679:529-548 MS.gene68963:CDS 50.0%
! AAGCATCGCTGAGTCTGGAA+AGG + 32679:1297-1316 MS.gene68963:CDS 50.0%
! AGCCCTGGTTCAAGTTTGGT+AGG - 32679:1946-1965 MS.gene68963:intergenic 50.0%
! GAGTCTGGAAAGGCTTTTCC+AGG + 32679:1307-1326 MS.gene68963:CDS 50.0%
! GGAAAGGCTTTTCCAGGTGA+AGG + 32679:1313-1332 MS.gene68963:CDS 50.0%
! GTACAGCCCTGGTTCAAGTT+TGG - 32679:1950-1969 MS.gene68963:intergenic 50.0%
! TACATGCTTGCTCTGAGCAG+TGG - 32679:808-827 MS.gene68963:intergenic 50.0%
! TTTTGCTCGGCAGCGTTACT+GGG + 32679:1573-1592 MS.gene68963:CDS 50.0%
! TTTTTGCTCGGCAGCGTTAC+TGG + 32679:1572-1591 MS.gene68963:CDS 50.0%
!! GCCACTAAGCCATGGTTTTG+TGG + 32679:2781-2800 MS.gene68963:intron 50.0%
AATACCATGCCACAGTGGGC+TGG + 32679:2698-2717 MS.gene68963:CDS 55.0%
ACGGGGAAGCCATTCCGATA+TGG + 32679:1021-1040 MS.gene68963:CDS 55.0%
AGGAGCAATCATGGCTGTGC+CGG + 32679:1198-1217 MS.gene68963:CDS 55.0%
ATCCCTGAGCCACTAAGCCA+TGG + 32679:2773-2792 MS.gene68963:intron 55.0%
ATCCGGAAGACCAGCTACTC+GGG + 32679:2670-2689 MS.gene68963:CDS 55.0%
CAAGACACTGCCTTAGCCAG+AGG - 32679:1721-1740 MS.gene68963:intergenic 55.0%
CGGGGAAGCCATTCCGATAT+GGG + 32679:1022-1041 MS.gene68963:CDS 55.0%
CTCTGGCTAAGGCAGTGTCT+TGG + 32679:1719-1738 MS.gene68963:CDS 55.0%
GGAAGCCATTCCGATATGGG+TGG + 32679:1025-1044 MS.gene68963:CDS 55.0%
GGCATAGCTTCTCCACAGAC+AGG - 32679:3280-3299 MS.gene68963:intergenic 55.0%
TGAGAGGACGGAGCTTCAGA+AGG + 32679:953-972 MS.gene68963:CDS 55.0%
TTTGCTCGGCAGCGTTACTG+GGG + 32679:1574-1593 MS.gene68963:CDS 55.0%
! TCTGAAGCTCCGTCCTCTCA+AGG - 32679:953-972 MS.gene68963:intergenic 55.0%
!! TTCCCGAGTAGCTGGTCTTC+CGG - 32679:2675-2694 MS.gene68963:intergenic 55.0%
CAGCATGAACCAGCCCACTG+TGG - 32679:2710-2729 MS.gene68963:intergenic 60.0%
CAGTGGTGAGACTGTCCCTC+TGG + 32679:1627-1646 MS.gene68963:CDS 60.0%
GACACTGCCTTAGCCAGAGG+AGG - 32679:1718-1737 MS.gene68963:intergenic 60.0%
GAGGTCAGAAGGGGCTGAGT+TGG + 32679:538-557 MS.gene68963:CDS 60.0%
GGAATGGCTTCCCCGTTTGC+TGG - 32679:1017-1036 MS.gene68963:intergenic 60.0%
TGAACCAGCCCACTGTGGCA+TGG - 32679:2705-2724 MS.gene68963:intergenic 60.0%
!! CACAGTGGGCTGGTTCATGC+TGG + 32679:2708-2727 MS.gene68963:CDS 60.0%
AGGAACAGGGGAGCCTCCTC+TGG + 32679:1702-1721 MS.gene68963:CDS 65.0%
AGGAGGCTCCCCTGTTCCTG+TGG - 32679:1701-1720 MS.gene68963:intergenic 65.0%
AGGGGAGCCTCCTCTGGCTA+AGG + 32679:1708-1727 MS.gene68963:CDS 65.0%
GGAGGCTCCCCTGTTCCTGT+GGG - 32679:1700-1719 MS.gene68963:intergenic 65.0%


Chromosome Type Strat End Strand Name
32679 gene 518 3319 518 ID=MS.gene68963
32679 mRNA 518 3319 518 ID=MS.gene68963.t1;Parent=MS.gene68963
32679 exon 518 648 518 ID=MS.gene68963.t1.exon1;Parent=MS.gene68963.t1
32679 CDS 518 648 518 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 758 824 758 ID=MS.gene68963.t1.exon2;Parent=MS.gene68963.t1
32679 CDS 758 824 758 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 912 1066 912 ID=MS.gene68963.t1.exon3;Parent=MS.gene68963.t1
32679 CDS 912 1066 912 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 1189 1453 1189 ID=MS.gene68963.t1.exon4;Parent=MS.gene68963.t1
32679 CDS 1189 1453 1189 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 1547 1741 1547 ID=MS.gene68963.t1.exon5;Parent=MS.gene68963.t1
32679 CDS 1547 1741 1547 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 2650 2729 2650 ID=MS.gene68963.t1.exon6;Parent=MS.gene68963.t1
32679 CDS 2650 2729 2650 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 2920 2982 2920 ID=MS.gene68963.t1.exon7;Parent=MS.gene68963.t1
32679 CDS 2920 2982 2920 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
32679 exon 3121 3319 3121 ID=MS.gene68963.t1.exon8;Parent=MS.gene68963.t1
32679 CDS 3121 3319 3121 ID=cds.MS.gene68963.t1;Parent=MS.gene68963.t1
Gene Sequence

>MS.gene68963

ATGCAGAGAAATTGGATAGGGAGGTCAGAAGGGGCTGAGTTGGATTTTTGCATTCTTGATGGTGATGGAAAGGAGAGAGACACGCAGATTACTGTGTATACTACCAGGCCTGATACGATCTTTGGAGCAACGTATTTATCTATTCAATTTTCAATAAATATTTTATGAACTTTATGAATCAGATTAAGCACTCATGAAATAAACTATTCATCAATTTCCTATTTGCTTGGTTTGTGTTAGTTACTTGGTTGTGGCACCAGAGCATTCCTTGATCTCATCATTGATTTCCACTGCTCAGAGCAAGCATGTAAGTTATGCATTTCCGTTGCCTATTTATTAGAAGGATTTTAATCGGAGACAAGGAGATGGTGATTCTTAGGGATTTTAATCTCAGGTAGAAGATTATATTGACCTTGCCTCAAAAAAGAGTGACCTTGAGAGGACGGAGCTTCAGAAGGAAAAGACTGGAGTCTTTACTGGTTGTTATGCAAAAAATCCAGCAAACGGGGAAGCCATTCCGATATGGGTGGCAGATTATGTTTTGGGGAGGTGTGTATACAAGTATCATTTAGAATGCAGATTTCATTTATTGATTGCTAAATATTCCATGACATGGTCAATGTGGTGAAAAGTTATATGAAACCAGAATATAATTGTGGTTACTGTGGCAGTTATGGAACAGGAGCAATCATGGCTGTGCCGGCACATGATTCACGCGATTATGAGTTTGCTTTGAAATATGACATTCCTATTCGCTGGGTTGTAATGCCAGATGATAAAAGCATCGCTGAGTCTGGAAAGGCTTTTCCAGGTGAAGGCATTATTGCAAATTCATCAAATACGTTAATGGGGCTTGACATTAATGGCTTGCGTAGCAAAGAAGCAGCTCTAAAAGTCATTGATTGGGCAGAAAAAAGTGGAAATGGAAAGAGAAAGGTTCATATCTAAAATTATAATAAGCTTGTTCATTTTATTGGAACGTTGTTTTTTATGGCTTGTATAATATGAAATACATTGTTCTTCCTTCAGGTGAACTACAAGTTAAGGGACTGGCTTTTTGCTCGGCAGCGTTACTGGGGCGAACCTATCCCTGTCATCTTCTTGGATGACAGTGGTGAGACTGTCCCTCTGGATGAGACTGAATTGCCCCTTATTCTACCTGAATTGGATGATTTTTCTCCCACAGGAACAGGGGAGCCTCCTCTGGCTAAGGCAGTGTCTTGGGTAAGCTTATACCAAATACAAATCGTTACTTTGCTTCTGCATACTTTGTTATCAAGATATAATGGCAATTGGATGCCTTTTTATCATTTCTTTGGCATTGGCACAAATGTTGATGGTTTACCGAAATCTCACTATTAAATTTTCCATACATAAAAAAACATAGTTACTGATCTTGATTTGACTGGCTGATCAGACGATAAACCTACCAAACTTGAACCAGGGCTGTACTTTTTTTGGCTATTAAGCCCTCTGCTACTATACATCGACTAATAAATTTAAGAGCCGACATGATAACAGTCTGGTGTAGTGGTTCATGAATTATATTTCCCCTTTCATATCAAGACAATGTTACCCGGTCCTTTTCTAATTGAATCATTGTCTTATCTGGGTACATCTTCTATTTTGCTGCAAATGCAAATGCAAATGCAATCAGGTGGAGAAATCTATAGATTGATTATTTTAGGAGTTTCAAGTACCTTCAAAGGAACTTTTCCGTGCACTCCCTAAAATCTTGTCACAGGAAGAGAGAACTTATAGTCACACTAGTGGTCATTTTCAATATCTACACGAGTTGCTCTTTAGATTATTTGTCTTCTTATATACTGTCTAAAAAATTCTGAGTAAGAACTCTGCCTATATCATTTAATATTTTCTTAATGCATTAGCCTCATTCAAAAATATAAGCCGTTCTAATTTATAAGGAAACTGAAAGGCCTGTAGTAATAGGTCCTATATTCTTGAAATTTTATGGAAGTGCAATACCATTAACATTTCTAAATGTGTACTTAGTATGACACAAGTTAAATTACTTAGATAATTCTGAGTCCTCTGTTTTTGTTTTCTTAGCTTGTTTTCCCCTCTCATTGTAATCGTTCTTTTATATTTTTTTTGGATGGTACCACTTTTAGGTGAAGACCACAGATAGGTTATCCGGAAGACCAGCTACTCGGGAAACAAATACCATGCCACAGTGGGCTGGTTCATGCTGGTAAGTTATTGGGAGGATCTTGAATGATTTTGTTTTATTAGTAATCCCTGAGCCACTAAGCCATGGTTTTGTGGCTAAGTCCAGTAGTTTTGTGGTCTTGATTCTGGATTTTTATGCATCTGATACAAATGAAAATAAAGTGTAATTCTTTTTACGTGTATATGTCACATGTCCTTTAATATCCTTCCAGGTACTATTTGAGATTTATGGACCCAAATAATTCCAAAGAACTGGTTGATAAGGAAAAAGAAAGGTGTAGCTTCAACTAATTTTGTCTATCTTTCCAGTAGTTACTCGTTATCCATTTTTTGCTGGTTTCTTATATTTTACTTGCACAATTTCTAGCTGATTGAATTTCCCCGCCCACTTTAAAATTGTTTTTCTCTTGCAGGTATTGGGGCCCTGTTGATGTGTATGTTGGTGGTGCTGAGCATGCAGTTCTCCATTTACTATATGCTAGGTTCTGGCACAAGGTTTGTATTTGGTTCCAGTATCAATCTGGAACATGTTGGTCTGTGATTTGTTTCAATCTAAGCCATGAATTTAACCTGTCTGTGGAGAAGCTATGCCCTGTCACTCTTGTTCCATGA

Protein sequence

>MS.gene68963.t1

MQRNWIGRSEGAELDFCILDGDGKERDTQITVYTTRPDTIFGATYLVVAPEHSLISSLISTAQSKHVEDYIDLASKKSDLERTELQKEKTGVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDIPIRWVVMPDDKSIAESGKAFPGEGIIANSSNTLMGLDINGLRSKEAALKVIDWAEKSGNGKRKVNYKLRDWLFARQRYWGEPIPVIFLDDSGETVPLDETELPLILPELDDFSPTGTGEPPLAKAVSWVKTTDRLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKEKERYWGPVDVYVGGAEHAVLHLLYARFWHKVCIWFQYQSGTCWSVICFNLSHEFNLSVEKLCPVTLVP