AlfalfaGEDB | MS.gene062941

M. sativa cultivar XinJiangDaYe / MS.gene062941

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062941.t1	AES89296.1	91.2	91	8	0	1	91	1	91	1.70E-40	174.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062941.t1	P33083	81.1	90	14	2	1	88	1	89	1.4e-33	143.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062941.t1	G7JL21	91.2	91	8	0	1	91	1	91	1.3e-40	174.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049356	MS.gene062941	0.806416	8.32E-50	-1.69E-46
MS.gene049369	MS.gene062941	0.831777	1.38E-55	-1.69E-46
MS.gene049396	MS.gene062941	0.812849	3.45E-51	-1.69E-46
MS.gene050083	MS.gene062941	-0.823212	1.56E-53	-1.69E-46
MS.gene050809	MS.gene062941	-0.827505	1.51E-54	-1.69E-46
MS.gene051228	MS.gene062941	0.821705	3.50E-53	-1.69E-46
MS.gene051874	MS.gene062941	0.817669	2.92E-52	-1.69E-46
MS.gene053103	MS.gene062941	0.804126	2.51E-49	-1.69E-46
MS.gene053104	MS.gene062941	0.830345	3.09E-55	-1.69E-46
MS.gene053384	MS.gene062941	0.804248	2.37E-49	-1.69E-46
MS.gene053449	MS.gene062941	0.836613	8.45E-57	-1.69E-46
MS.gene053912	MS.gene062941	0.811585	6.50E-51	-1.69E-46
MS.gene053916	MS.gene062941	0.830176	3.40E-55	-1.69E-46
MS.gene054543	MS.gene062941	0.810687	1.02E-50	-1.69E-46
MS.gene05505	MS.gene062941	0.814337	1.62E-51	-1.69E-46
MS.gene05592	MS.gene062941	0.840633	7.73E-58	-1.69E-46
MS.gene056422	MS.gene062941	0.86391	1.78E-64	-1.69E-46
MS.gene056511	MS.gene062941	0.817801	2.73E-52	-1.69E-46
MS.gene05735	MS.gene062941	0.817109	3.91E-52	-1.69E-46
MS.gene057537	MS.gene062941	0.817766	2.78E-52	-1.69E-46
MS.gene057926	MS.gene062941	0.835168	1.96E-56	-1.69E-46
MS.gene057927	MS.gene062941	0.816329	5.85E-52	-1.69E-46
MS.gene058459	MS.gene062941	0.858505	7.87E-63	-1.69E-46
MS.gene058840	MS.gene062941	-0.836989	6.77E-57	-1.69E-46
MS.gene058928	MS.gene062941	0.811238	7.74E-51	-1.69E-46
MS.gene05913	MS.gene062941	0.831783	1.37E-55	-1.69E-46
MS.gene059366	MS.gene062941	0.808701	2.72E-50	-1.69E-46
MS.gene059536	MS.gene062941	0.801277	9.71E-49	-1.69E-46
MS.gene059711	MS.gene062941	0.818332	2.07E-52	-1.69E-46
MS.gene059807	MS.gene062941	0.841944	3.49E-58	-1.69E-46
MS.gene060804	MS.gene062941	0.830045	3.66E-55	-1.69E-46
MS.gene060818	MS.gene062941	0.863687	2.08E-64	-1.69E-46
MS.gene060837	MS.gene062941	0.803374	3.59E-49	-1.69E-46
MS.gene061041	MS.gene062941	0.861909	7.37E-64	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene68164	MS.gene062941	PPI
MS.gene031198	MS.gene062941	PPI
MS.gene75674	MS.gene062941	PPI
MS.gene031200	MS.gene062941	PPI
MS.gene003615	MS.gene062941	PPI
MS.gene045364	MS.gene062941	PPI
MS.gene062941	MS.gene50764	PPI
MS.gene003602	MS.gene062941	PPI
MS.gene23372	MS.gene062941	PPI
MS.gene003627	MS.gene062941	PPI
MS.gene003577	MS.gene062941	PPI
MS.gene77524	MS.gene062941	PPI
MS.gene062984	MS.gene062941	PPI
MS.gene057801	MS.gene062941	PPI
MS.gene014222	MS.gene062941	PPI
MS.gene40327	MS.gene062941	PPI
MS.gene031201	MS.gene062941	PPI
MS.gene062941	MS.gene014670	PPI
MS.gene045362	MS.gene062941	PPI
MS.gene77523	MS.gene062941	PPI
MS.gene003587	MS.gene062941	PPI
MS.gene062941	MS.gene75679	PPI
MS.gene003590	MS.gene062941	PPI
MS.gene045368	MS.gene062941	PPI
MS.gene063112	MS.gene062941	PPI
MS.gene79891	MS.gene062941	PPI
MS.gene79890	MS.gene062941	PPI
MS.gene79887	MS.gene062941	PPI
MS.gene062973	MS.gene062941	PPI
MS.gene77526	MS.gene062941	PPI
MS.gene047517	MS.gene062941	PPI
MS.gene062941	MS.gene014671	PPI
MS.gene045360	MS.gene062941	PPI
MS.gene014669	MS.gene062941	PPI
MS.gene057818	MS.gene062941	PPI
MS.gene062941	MS.gene75672	PPI
MS.gene68162	MS.gene062941	PPI
MS.gene014223	MS.gene062941	PPI
MS.gene50687	MS.gene062941	PPI
MS.gene062941	MS.gene062974	PPI
MS.gene75677	MS.gene062941	PPI
MS.gene057795	MS.gene062941	PPI
MS.gene68165	MS.gene062941	PPI
MS.gene045361	MS.gene062941	PPI
MS.gene50675	MS.gene062941	PPI
MS.gene003591	MS.gene062941	PPI
MS.gene062979	MS.gene062941	PPI
MS.gene40325	MS.gene062941	PPI
MS.gene062943	MS.gene062941	PPI
MS.gene01358	MS.gene062941	PPI
MS.gene014668	MS.gene062941	PPI
MS.gene003608	MS.gene062941	PPI
MS.gene75675	MS.gene062941	PPI
MS.gene003583	MS.gene062941	PPI
MS.gene062941	MS.gene50684	PPI
MS.gene79888	MS.gene062941	PPI
MS.gene40326	MS.gene062941	PPI
MS.gene77527	MS.gene062941	PPI
MS.gene062941	MS.gene79886	PPI
MS.gene062941	MS.gene50765	PPI
MS.gene50654	MS.gene062941	PPI
MS.gene50676	MS.gene062941	PPI
MS.gene003614	MS.gene062941	PPI
MS.gene057797	MS.gene062941	PPI
MS.gene50652	MS.gene062941	PPI
MS.gene23370	MS.gene062941	PPI
MS.gene50766	MS.gene062941	PPI
MS.gene003594	MS.gene062941	PPI
MS.gene003596	MS.gene062941	PPI
MS.gene50665	MS.gene062941	PPI
MS.gene79889	MS.gene062941	PPI
MS.gene50677	MS.gene062941	PPI
MS.gene003625	MS.gene062941	PPI
MS.gene68759	MS.gene062941	PPI
MS.gene003586	MS.gene062941	PPI
MS.gene062941	MS.gene045367	PPI
MS.gene01764	MS.gene062941	PPI
MS.gene50763	MS.gene062941	PPI
MS.gene062941	MS.gene057808	PPI
MS.gene062941	MS.gene002380	PPI
MS.gene045365	MS.gene062941	PPI
MS.gene79885	MS.gene062941	PPI
MS.gene50659	MS.gene062941	PPI
MS.gene75316	MS.gene062941	PPI
MS.gene057790	MS.gene062941	PPI
MS.gene062941	MS.gene68163	PPI
MS.gene062952	MS.gene062941	PPI
MS.gene045363	MS.gene062941	PPI
MS.gene003624	MS.gene062941	PPI
MS.gene062941	MS.gene75315	PPI
MS.gene23371	MS.gene062941	PPI
MS.gene031199	MS.gene062941	PPI
MS.gene75314	MS.gene062941	PPI
MS.gene77529	MS.gene062941	PPI
MS.gene68761	MS.gene062941	PPI
MS.gene014667	MS.gene062941	PPI
MS.gene68760	MS.gene062941	PPI
MS.gene75676	MS.gene062941	PPI
MS.gene062951	MS.gene062941	PPI
MS.gene062941	MS.gene75678	PPI
MS.gene057778	MS.gene062941	PPI
MS.gene062988	MS.gene062941	PPI
MS.gene75673	MS.gene062941	PPI
MS.gene045366	MS.gene062941	PPI
MS.gene062963	MS.gene062941	PPI
MS.gene77528	MS.gene062941	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062941.t1	MTR_4g072230	91.209	91	8	0	1	91	1	91	5.21e-59	175
MS.gene062941.t1	MTR_4g072310	84.946	93	12	1	1	91	1	93	1.07e-54	164
MS.gene062941.t1	MTR_4g072860	83.871	93	13	1	1	91	1	93	6.02e-53	160
MS.gene062941.t1	MTR_4g072270	80.645	93	16	1	1	91	1	93	7.50e-53	160
MS.gene062941.t1	MTR_4g072880	80.645	93	16	1	1	91	1	93	2.56e-52	159
MS.gene062941.t1	MTR_4g072250	80.435	92	17	1	1	91	1	92	9.52e-51	154
MS.gene062941.t1	MTR_4g072500	77.419	93	18	2	1	91	1	92	9.86e-50	152
MS.gene062941.t1	MTR_4g072480	76.344	93	19	2	1	91	1	92	2.68e-48	148
MS.gene062941.t1	MTR_4g072640	75.824	91	19	2	1	89	1	90	2.81e-47	145
MS.gene062941.t1	MTR_4g072530	73.626	91	21	2	1	89	1	90	1.22e-46	144
MS.gene062941.t1	MTR_4g072620	73.118	93	22	2	1	91	1	92	1.46e-46	144
MS.gene062941.t1	MTR_3g084240	76.344	93	19	2	1	91	1	92	3.17e-46	143
MS.gene062941.t1	MTR_3g084170	75.269	93	20	2	1	91	1	92	3.59e-45	140
MS.gene062941.t1	MTR_4g072680	70.968	93	24	2	1	91	1	92	2.79e-44	138
MS.gene062941.t1	MTR_4g072460	70.968	93	24	2	1	91	1	92	4.73e-44	137
MS.gene062941.t1	MTR_4g050700	70.968	93	25	1	1	91	1	93	5.81e-44	137
MS.gene062941.t1	MTR_2g012410	70.968	93	25	1	1	91	1	93	5.81e-44	137
MS.gene062941.t1	MTR_4g072730	69.565	92	25	2	1	90	1	91	8.46e-44	137
MS.gene062941.t1	MTR_3g084150	72.043	93	23	2	1	91	1	92	1.06e-43	137
MS.gene062941.t1	MTR_4g072370	75.824	91	17	2	1	89	1	88	5.62e-43	135
MS.gene062941.t1	MTR_3g084220	72.043	93	23	2	1	91	1	92	5.77e-43	135
MS.gene062941.t1	MTR_4g072570	72.043	93	23	2	1	91	1	92	7.03e-43	135
MS.gene062941.t1	MTR_3g084180	70.968	93	24	2	1	91	1	92	1.07e-42	134
MS.gene062941.t1	MTR_4g072240	68.132	91	27	1	1	89	1	91	1.13e-42	134
MS.gene062941.t1	MTR_3g117630	76.471	85	18	1	4	86	3	87	1.33e-42	134
MS.gene062941.t1	MTR_3g110032	70.968	93	25	1	1	91	1	93	1.48e-42	134
MS.gene062941.t1	MTR_4g072220	67.742	93	28	1	1	91	1	93	2.14e-42	133
MS.gene062941.t1	MTR_4g072870	69.231	91	26	1	1	89	1	91	3.70e-42	133
MS.gene062941.t1	MTR_8g461410	68.817	93	26	2	1	91	1	92	6.31e-42	132
MS.gene062941.t1	MTR_3g110038	72.727	88	21	2	1	86	1	87	1.44e-41	131
MS.gene062941.t1	MTR_4g072850	74.468	94	21	2	1	91	1	94	1.52e-41	131
MS.gene062941.t1	MTR_4g072660	67.742	93	22	2	1	91	1	87	6.49e-41	129
MS.gene062941.t1	MTR_3g084250	68.817	93	26	2	1	91	1	92	1.09e-40	129
MS.gene062941.t1	MTR_4g072300	64.835	91	30	1	1	89	1	91	1.36e-40	129
MS.gene062941.t1	MTR_4g072290	69.231	91	16	1	1	91	1	79	3.43e-40	127
MS.gene062941.t1	MTR_4g072580	73.333	90	16	2	1	88	1	84	7.92e-40	127
MS.gene062941.t1	MTR_4g072600	72.222	90	17	2	1	88	1	84	8.27e-40	127
MS.gene062941.t1	MTR_4g072260	63.441	93	32	1	1	91	1	93	1.26e-39	126
MS.gene062941.t1	MTR_3g110042	71.591	88	22	2	1	86	1	87	3.24e-39	125
MS.gene062941.t1	MTR_4g072890	63.736	91	31	1	1	89	1	91	5.50e-39	125
MS.gene062941.t1	MTR_4g072830	72.222	90	20	2	1	88	1	87	7.93e-39	124
MS.gene062941.t1	MTR_3g084260	65.591	93	30	1	1	91	1	93	1.09e-38	124
MS.gene062941.t1	MTR_3g084210	70.968	93	24	2	1	91	1	92	5.13e-38	122
MS.gene062941.t1	MTR_4g072740	70.330	91	19	2	1	89	1	85	5.95e-38	122
MS.gene062941.t1	MTR_5g008370	84.286	70	9	1	23	90	22	91	6.52e-38	124
MS.gene062941.t1	MTR_4g072330	67.033	91	25	2	1	89	1	88	7.51e-38	122
MS.gene062941.t1	MTR_4g072490	68.132	91	21	2	1	89	1	85	1.16e-37	121
MS.gene062941.t1	MTR_3g084190	69.892	93	25	2	1	91	1	92	2.60e-37	120
MS.gene062941.t1	MTR_8g461420	71.429	91	23	2	1	89	1	90	4.91e-37	120
MS.gene062941.t1	MTR_4g072940	73.256	86	20	2	3	85	33	118	1.25e-36	120
MS.gene062941.t1	MTR_3g084230	71.429	91	23	2	1	89	1	90	1.38e-36	119
MS.gene062941.t1	MTR_4g072470	70.000	90	19	2	1	88	1	84	1.71e-36	118
MS.gene062941.t1	MTR_4g072610	70.000	90	18	2	1	88	1	83	4.66e-36	117
MS.gene062941.t1	MTR_5g008360	70.886	79	21	1	15	91	5	83	4.72e-36	117
MS.gene062941.t1	MTR_3g084160	66.667	93	28	2	1	91	1	92	1.52e-35	116
MS.gene062941.t1	MTR_4g072380	68.478	92	20	3	1	89	1	86	3.68e-35	115
MS.gene062941.t1	MTR_4g072820	68.478	92	19	3	1	89	1	85	5.55e-35	114
MS.gene062941.t1	MTR_3g110045	74.118	85	20	1	9	91	67	151	8.02e-35	116
MS.gene062941.t1	MTR_4g072540	65.934	91	24	2	1	89	1	86	1.44e-34	114
MS.gene062941.t1	MTR_4g072465	65.909	88	23	2	1	86	1	83	1.98e-34	113
MS.gene062941.t1	MTR_4g072630	63.736	91	26	2	1	89	1	86	2.07e-34	113
MS.gene062941.t1	MTR_4g072720	65.934	91	24	2	1	89	1	86	4.82e-34	112
MS.gene062941.t1	MTR_4g072590	77.941	68	13	1	24	89	18	85	1.10e-33	111
MS.gene062941.t1	MTR_4g072650	67.778	90	20	3	1	88	1	83	1.52e-33	111
MS.gene062941.t1	MTR_4g072670	77.143	70	14	1	22	89	17	86	9.09e-33	109
MS.gene062941.t1	MTR_4g072550	66.250	80	24	2	15	91	24	103	1.97e-32	108
MS.gene062941.t1	MTR_4g072910	60.000	95	28	3	4	89	7	100	2.32e-32	108
MS.gene062941.t1	MTR_3g084200	72.603	73	17	2	1	71	1	72	6.20e-32	107
MS.gene062941.t1	MTR_4g072980	56.250	96	36	3	1	91	1	95	8.93e-32	107
MS.gene062941.t1	MTR_4g072560	55.102	98	35	3	1	89	1	98	1.41e-31	106
MS.gene062941.t1	MTR_5g008350	67.500	80	18	2	1	78	1	74	2.81e-31	105
MS.gene062941.t1	MTR_4g072510	72.857	70	17	1	22	89	17	86	3.31e-31	105
MS.gene062941.t1	MTR_4g072450	76.119	67	14	1	24	88	18	84	3.01e-30	102
MS.gene062941.t1	MTR_4g072770	80.952	63	10	1	26	86	15	77	1.50e-29	100
MS.gene062941.t1	MTR_4g072690	74.627	67	15	1	24	88	18	84	4.51e-29	99.8
MS.gene062941.t1	MTR_3g117640	66.667	69	20	1	25	90	33	101	8.15e-29	99.8
MS.gene062941.t1	MTR_4g072280	60.000	75	28	1	1	73	1	75	3.18e-27	95.1
MS.gene062941.t1	MTR_4g072750	59.302	86	28	4	1	80	1	85	1.47e-26	93.6
MS.gene062941.t1	MTR_6g077850	49.425	87	41	2	4	88	13	98	2.31e-25	90.9
MS.gene062941.t1	MTR_8g461400	54.945	91	16	3	1	91	1	66	1.32e-24	88.2
MS.gene062941.t1	MTR_3g113310	58.824	68	25	2	24	89	40	106	1.83e-24	89.0
MS.gene062941.t1	MTR_3g110035	56.962	79	31	2	15	91	61	138	4.36e-24	89.0
MS.gene062941.t1	MTR_3g117610	61.194	67	23	2	24	88	43	108	1.94e-23	86.3
MS.gene062941.t1	MTR_4g072190	58.571	70	26	2	22	89	32	100	2.04e-23	85.9
MS.gene062941.t1	MTR_4g072930	50.000	82	35	1	11	86	26	107	3.40e-22	83.2
MS.gene062941.t1	MTR_5g021820	56.716	67	26	2	25	89	39	104	2.81e-21	80.9
MS.gene062941.t1	MTR_8g076040	56.716	67	26	2	25	89	40	105	4.92e-21	80.1
MS.gene062941.t1	MTR_4g124750	56.716	67	26	2	25	89	68	133	1.09e-19	78.2
MS.gene062941.t1	MTR_2g043960	56.716	67	26	2	25	89	75	140	1.25e-19	78.2
MS.gene062941.t1	MTR_4g072840	48.889	90	15	3	1	89	1	60	3.97e-19	73.9
MS.gene062941.t1	MTR_7g118010	49.254	67	29	2	26	88	23	88	3.41e-16	67.8
MS.gene062941.t1	MTR_1g024085	52.857	70	27	3	15	82	29	94	4.64e-16	68.6
MS.gene062941.t1	MTR_3g092220	50.000	66	28	2	21	82	28	92	5.70e-16	67.4
MS.gene062941.t1	MTR_4g025830	48.485	66	28	2	26	86	79	143	7.39e-16	68.6
MS.gene062941.t1	MTR_8g461210	43.182	88	46	3	4	89	14	99	9.87e-16	67.0
MS.gene062941.t1	MTR_0388s0020	43.836	73	35	2	21	88	70	141	1.76e-15	67.0
MS.gene062941.t1	MTR_1g094750	43.158	95	39	4	4	84	16	109	6.22e-15	64.7
MS.gene062941.t1	MTR_8g026730	44.776	67	32	2	26	88	27	92	8.84e-15	64.3
MS.gene062941.t1	MTR_1g061570	50.000	68	31	2	25	90	18	84	1.80e-14	63.9
MS.gene062941.t1	MTR_1g009150	57.377	61	23	2	26	84	71	130	1.80e-14	65.1
MS.gene062941.t1	MTR_1g063950	44.000	75	39	2	15	87	37	110	4.85e-14	62.8
MS.gene062941.t1	MTR_4g072160	52.308	65	26	3	23	84	34	96	6.17e-14	62.8
MS.gene062941.t1	MTR_3g109160	39.623	106	42	3	6	90	30	134	1.68e-13	62.4
MS.gene062941.t1	MTR_1g059770	43.939	66	34	2	26	89	49	113	1.78e-13	61.6
MS.gene062941.t1	MTR_7g101740	51.562	64	28	2	25	86	39	101	2.90e-13	60.5
MS.gene062941.t1	MTR_4g005320	52.459	61	26	2	26	84	70	129	3.86e-13	61.2
MS.gene062941.t1	MTR_3g097120	45.946	74	29	2	21	84	4	76	1.04e-12	58.9
MS.gene062941.t1	MTR_7g104940	44.444	63	32	2	29	89	53	114	5.32e-12	57.8
MS.gene062941.t1	MTR_3g105900	70.732	41	10	1	25	63	1171	1211	1.60e-11	58.9
MS.gene062941.t1	MTR_7g104950	37.333	75	44	2	17	89	41	114	2.39e-11	55.8
MS.gene062941.t1	MTR_2g095430	46.377	69	28	3	17	77	34	101	3.06e-11	55.8
MS.gene062941.t1	MTR_8g094980	45.946	74	24	2	26	84	3	75	3.17e-11	55.1
MS.gene062941.t1	MTR_7g405740	47.541	61	29	2	26	84	67	126	6.85e-11	55.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062941.t1	AT4G38840	65.854	82	25	1	8	86	15	96	1.82e-33	111
MS.gene062941.t1	AT5G18020	67.123	73	21	1	17	86	15	87	3.75e-32	107
MS.gene062941.t1	AT4G34770	68.000	75	20	1	20	90	29	103	1.53e-31	106
MS.gene062941.t1	AT5G18080	63.158	76	25	1	17	89	15	90	2.86e-31	105
MS.gene062941.t1	AT5G18050	61.842	76	26	1	17	89	15	90	7.10e-31	104
MS.gene062941.t1	AT3G03840	54.945	91	30	2	11	90	5	95	8.84e-31	104
MS.gene062941.t1	AT5G18060	64.000	75	24	1	17	88	15	89	1.04e-30	104
MS.gene062941.t1	AT4G38850	59.770	87	20	2	8	89	13	89	1.18e-30	103
MS.gene062941.t1	AT3G03850	60.674	89	26	2	11	90	5	93	1.25e-30	103
MS.gene062941.t1	AT5G18030	59.524	84	29	2	11	89	5	88	1.78e-30	103
MS.gene062941.t1	AT2G21200	66.667	72	21	1	20	88	15	86	2.28e-30	103
MS.gene062941.t1	AT3G03820	55.319	94	34	2	2	90	6	96	3.54e-30	103
MS.gene062941.t1	AT5G18010	60.526	76	27	1	17	89	15	90	1.14e-29	101
MS.gene062941.t1	AT4G38825	66.197	71	21	1	21	88	18	88	1.36e-29	101
MS.gene062941.t1	AT2G21210	51.064	94	40	2	1	88	1	94	1.08e-28	99.4
MS.gene062941.t1	AT2G21210	62.500	72	23	1	21	88	90	161	5.07e-28	99.8
MS.gene062941.t1	AT4G34810	65.278	72	18	2	17	81	38	109	9.46e-28	97.4
MS.gene062941.t1	AT4G34800	54.651	86	29	2	1	81	1	81	1.32e-27	96.7
MS.gene062941.t1	AT4G34780	53.191	94	36	2	4	89	3	96	1.19e-26	94.4
MS.gene062941.t1	AT3G03830	55.294	85	29	2	11	86	5	89	3.80e-26	92.8
MS.gene062941.t1	AT4G13790	51.163	86	32	3	8	89	13	92	6.98e-25	89.7
MS.gene062941.t1	AT4G34790	61.538	65	21	1	26	86	39	103	4.44e-24	87.8
MS.gene062941.t1	AT4G34760	60.294	68	24	2	24	89	41	107	3.67e-23	85.5
MS.gene062941.t1	AT4G38860	58.824	68	26	1	24	89	38	105	8.89e-23	84.7
MS.gene062941.t1	AT1G75580	60.294	68	24	2	24	89	42	108	1.40e-22	84.3
MS.gene062941.t1	AT2G21220	61.538	65	22	2	24	86	38	101	2.94e-22	83.2
MS.gene062941.t1	AT3G43120	54.412	68	28	2	25	90	78	144	5.96e-20	79.0
MS.gene062941.t1	AT2G16580	46.591	88	44	2	4	89	22	108	6.78e-20	77.4
MS.gene062941.t1	AT5G20810	55.882	68	27	2	25	90	78	144	2.11e-19	77.8
MS.gene062941.t1	AT1G19830	58.333	72	26	3	21	89	43	113	2.18e-19	76.3
MS.gene062941.t1	AT4G36110	55.224	67	27	2	25	89	39	104	6.09e-19	74.7
MS.gene062941.t1	AT5G20810	55.882	68	27	2	25	90	78	144	6.13e-19	77.0
MS.gene062941.t1	AT2G18010	53.731	67	28	2	25	89	47	112	6.74e-18	72.4
MS.gene062941.t1	AT3G20220	54.839	62	24	2	26	84	47	107	3.62e-17	70.9
MS.gene062941.t1	AT2G46690	42.857	84	41	3	13	90	10	92	6.63e-17	70.1
MS.gene062941.t1	AT5G10990	55.000	60	24	2	25	82	40	98	3.72e-16	68.9
MS.gene062941.t1	AT2G45210	46.479	71	32	2	21	86	74	143	1.23e-15	67.8
MS.gene062941.t1	AT3G03847	41.250	80	46	1	3	81	48	127	1.27e-15	67.0
MS.gene062941.t1	AT1G19840	46.429	84	39	4	4	82	16	98	1.32e-15	67.4
MS.gene062941.t1	AT3G61900	47.826	69	30	2	25	88	29	96	1.35e-15	67.0
MS.gene062941.t1	AT1G75590	50.000	74	32	3	11	82	29	99	1.35e-15	67.4
MS.gene062941.t1	AT3G51200	54.688	64	25	3	21	81	34	96	1.89e-15	65.9
MS.gene062941.t1	AT5G66260	51.515	66	29	2	26	89	34	98	1.91e-15	65.9
MS.gene062941.t1	AT5G53590	36.842	95	52	2	1	88	21	114	3.24e-15	66.2
MS.gene062941.t1	AT3G60690	47.143	70	31	2	22	86	84	152	1.06e-14	65.5
MS.gene062941.t1	AT2G37030	50.769	65	29	2	25	87	48	111	1.75e-14	63.9
MS.gene062941.t1	AT4G34750	46.875	64	31	2	25	86	36	98	2.28e-14	64.3
MS.gene062941.t1	AT4G34750	46.875	64	31	2	25	86	36	98	2.28e-14	64.3
MS.gene062941.t1	AT4G00880	42.045	88	43	3	8	88	7	93	4.56e-14	62.8
MS.gene062941.t1	AT4G12410	45.312	64	29	2	26	84	76	138	6.41e-13	60.8
MS.gene062941.t1	AT2G36210	42.105	76	42	1	16	89	44	119	7.68e-13	60.1
MS.gene062941.t1	AT4G31320	54.098	61	25	2	26	84	80	139	9.40e-13	60.8
MS.gene062941.t1	AT2G24400	54.098	61	25	2	26	84	64	123	2.01e-12	59.7
MS.gene062941.t1	AT4G22620	41.176	68	34	2	22	84	75	141	2.56e-12	59.3
MS.gene062941.t1	AT1G76190	50.000	58	27	2	28	84	23	79	3.80e-12	58.2
MS.gene062941.t1	AT3G12830	38.158	76	44	2	16	89	40	114	7.68e-12	57.4
MS.gene062941.t1	AT3G53250	43.077	65	31	2	25	87	51	111	8.71e-12	57.0
MS.gene062941.t1	AT1G20470	43.056	72	39	2	20	90	17	87	1.49e-11	57.0
MS.gene062941.t1	AT3G53250	43.077	65	31	2	25	87	82	142	1.56e-11	57.0
MS.gene062941.t1	AT1G56150	42.424	66	35	2	26	89	38	102	8.32e-11	54.3
MS.gene062941.t1	AT5G03310	43.662	71	31	3	25	87	38	107	8.58e-11	54.3

Find 23 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+TGG	0.247037	4.2:+35666411	None:intergenic
AGTAAAGCTGAAGAAGAGTT+TGG	0.322754	4.2:-35666369	MS.gene062941:CDS
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.2:+35666412	None:intergenic
CTCAATAAGTCTTGAAACAA+TGG	0.448732	4.2:+35666390	None:intergenic
CACATAACATCTTGCTTGAA+AGG	0.452058	4.2:-35666291	MS.gene062941:CDS
CCGTGTATGTTGGAGAGAAA+CGG	0.463852	4.2:-35666443	MS.gene062941:CDS
GGATATCTTGCCGTGTATGT+TGG	0.488056	4.2:-35666453	MS.gene062941:CDS
GTTTCTCTGGTATCATCAGA+AGG	0.522188	4.2:-35666527	MS.gene062941:CDS
AAAAGCTGTGGACGTGCCAA+AGG	0.525848	4.2:-35666475	MS.gene062941:CDS
ATAAGTCTTGAAACAATGGT+TGG	0.525954	4.2:+35666394	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.2:-35666351	MS.gene062941:CDS
TACACGGCAAGATATCCCTT+TGG	0.549081	4.2:+35666459	None:intergenic
GACATCTTCGGAGCAAGGAA+TGG	0.562238	4.2:+35666320	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.2:+35666336	None:intergenic
GTTTGGATATGATCATCCAA+TGG	0.573812	4.2:-35666352	MS.gene062941:CDS
AAAGCTGTGGACGTGCCAAA+GGG	0.577804	4.2:-35666474	MS.gene062941:CDS
TGAAAGACATCTTCGGAGCA+AGG	0.586129	4.2:+35666315	None:intergenic
TCGAACAGTTTCAAAAGCTG+TGG	0.596457	4.2:-35666487	MS.gene062941:CDS
CCGTTTCTCTCCAACATACA+CGG	0.600066	4.2:+35666443	None:intergenic
TATGTGTTGAAAGACATCTT+CGG	0.606742	4.2:+35666308	None:intergenic
TTTCTCTGGTATCATCAGAA+GGG	0.617336	4.2:-35666526	MS.gene062941:CDS
GGATATGATCATCCAATGGG+TGG	0.648071	4.2:-35666348	MS.gene062941:CDS
CTTCGGAGCAAGGAATGGTG+AGG	0.674250	4.2:+35666325	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATAAGTCTTGAAACAATGGT+TGG	+	chr4.2:35666430-35666449	None:intergenic	30.0%
	CTCAATAAGTCTTGAAACAA+TGG	+	chr4.2:35666434-35666453	None:intergenic	30.0%
	TATGTGTTGAAAGACATCTT+CGG	+	chr4.2:35666516-35666535	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.2:35666470-35666489	MS.gene062941:CDS	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	chr4.2:35666412-35666431	None:intergenic	30.0%
	AGTAAAGCTGAAGAAGAGTT+TGG	-	chr4.2:35666452-35666471	MS.gene062941:CDS	35.0%
	CACATAACATCTTGCTTGAA+AGG	-	chr4.2:35666530-35666549	MS.gene062941:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	-	chr4.2:35666469-35666488	MS.gene062941:CDS	35.0%
	TTTCTCTGGTATCATCAGAA+GGG	-	chr4.2:35666295-35666314	MS.gene062941:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	chr4.2:35666413-35666432	None:intergenic	35.0%
	GTTTCTCTGGTATCATCAGA+AGG	-	chr4.2:35666294-35666313	MS.gene062941:CDS	40.0%
	TCGAACAGTTTCAAAAGCTG+TGG	-	chr4.2:35666334-35666353	MS.gene062941:CDS	40.0%
	CCGTGTATGTTGGAGAGAAA+CGG	-	chr4.2:35666378-35666397	MS.gene062941:CDS	45.0%
	CCGTTTCTCTCCAACATACA+CGG	+	chr4.2:35666381-35666400	None:intergenic	45.0%
	GGATATCTTGCCGTGTATGT+TGG	-	chr4.2:35666368-35666387	MS.gene062941:CDS	45.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.2:35666473-35666492	MS.gene062941:CDS	45.0%
	TACACGGCAAGATATCCCTT+TGG	+	chr4.2:35666365-35666384	None:intergenic	45.0%
	TGAAAGACATCTTCGGAGCA+AGG	+	chr4.2:35666509-35666528	None:intergenic	45.0%
	AAAAGCTGTGGACGTGCCAA+AGG	-	chr4.2:35666346-35666365	MS.gene062941:CDS	50.0%
	AAAGCTGTGGACGTGCCAAA+GGG	-	chr4.2:35666347-35666366	MS.gene062941:CDS	50.0%
	GACATCTTCGGAGCAAGGAA+TGG	+	chr4.2:35666504-35666523	None:intergenic	50.0%
	CTTCGGAGCAAGGAATGGTG+AGG	+	chr4.2:35666499-35666518	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	+	chr4.2:35666488-35666507	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35666284	35666559	35666284	ID=MS.gene062941
chr4.2	mRNA	35666284	35666559	35666284	ID=MS.gene062941.t1;Parent=MS.gene062941
chr4.2	exon	35666284	35666559	35666284	ID=MS.gene062941.t1.exon1;Parent=MS.gene062941.t1
chr4.2	CDS	35666284	35666559	35666284	ID=cds.MS.gene062941.t1;Parent=MS.gene062941.t1

Gene Sequence	>MS.gene062941 ATGGGTTTTCGTTTCTCTGGTATCATCAGAAGGGCATCATTTTCTGCAAATCGAACAGTTTCAAAAGCTGTGGACGTGCCAAAGGGATATCTTGCCGTGTATGTTGGAGAGAAACGGTTTGTGATCCCAATATCATACTTGAACCAACCATTGTTTCAAGACTTATTGAGTAAAGCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCTCCGAAGATGTCTTTCAACACATAACATCTTGCTTGAAAGGACTATGA
Protein sequence	>MS.gene062941.t1 MGFRFSGIIRRASFSANRTVSKAVDVPKGYLAVYVGEKRFVIPISYLNQPLFQDLLSKAEEEFGYDHPMGGLTIPCSEDVFQHITSCLKGL