AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063172

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063172.t1 MTR_3g116320 93.263 668 44 1 1 668 28 694 0.0 1289
MS.gene063172.t1 MTR_3g116270 75.356 491 119 2 179 668 23 512 0.0 766
MS.gene063172.t1 MTR_3g116270 67.647 238 75 1 1 236 28 265 1.17e-105 330
MS.gene063172.t1 MTR_3g116270 63.801 221 80 0 127 347 41 261 3.89e-88 285
MS.gene063172.t1 MTR_3g116270 59.414 239 96 1 87 324 23 261 4.44e-86 279
MS.gene063172.t1 MTR_3g116270 57.741 239 100 1 64 301 23 261 3.44e-82 269
MS.gene063172.t1 MTR_3g116270 59.649 114 40 2 14 123 156 267 9.33e-32 130
MS.gene063172.t1 MTR_4g069570 50.177 283 115 5 406 662 54 336 4.31e-94 294
MS.gene063172.t1 MTR_4g069520 32.630 711 361 26 8 664 65 711 3.72e-93 304
MS.gene063172.t1 MTR_4g069520 32.630 711 361 26 8 664 79 725 7.82e-93 303
MS.gene063172.t1 MTR_4g069040 56.000 225 97 2 439 661 285 509 2.40e-92 296
MS.gene063172.t1 MTR_4g069550 56.780 236 100 2 431 664 230 465 1.54e-90 290
MS.gene063172.t1 MTR_6g086530 57.073 205 85 3 460 661 1 205 2.73e-70 227
MS.gene063172.t1 MTR_3g116410 47.489 219 112 1 446 661 57 275 4.99e-69 227
MS.gene063172.t1 MTR_4g069680 46.575 219 114 1 446 661 68 286 7.38e-66 219
MS.gene063172.t1 MTR_3g107830 46.119 219 115 1 446 661 37 255 7.39e-66 218
MS.gene063172.t1 MTR_3g116380 42.466 219 122 2 447 662 86 303 4.55e-60 204
MS.gene063172.t1 MTR_1g008500 41.284 218 118 5 448 660 171 383 1.09e-45 167
MS.gene063172.t1 MTR_1g008470 39.720 214 122 4 448 659 89 297 9.48e-44 159
MS.gene063172.t1 MTR_1g008510 39.535 215 123 4 448 660 115 324 3.17e-43 159
MS.gene063172.t1 MTR_4g068420 53.191 141 45 3 526 664 2 123 1.40e-42 150
MS.gene063172.t1 MTR_1g008530 39.437 213 120 5 453 660 14 222 1.46e-42 154
MS.gene063172.t1 MTR_1g008590 39.070 215 123 4 448 659 113 322 1.77e-42 156
MS.gene063172.t1 MTR_0312s0030 39.070 215 123 4 448 659 113 322 2.64e-42 156
MS.gene063172.t1 MTR_1g007520 39.070 215 123 4 448 659 113 322 2.64e-42 156
MS.gene063172.t1 MTR_1g008560 38.356 219 124 5 448 660 115 328 9.70e-41 152
MS.gene063172.t1 MTR_3g109490 40.183 219 122 6 448 661 107 321 1.03e-40 151
MS.gene063172.t1 MTR_1g008460 38.208 212 125 3 448 659 89 294 4.64e-40 149
MS.gene063172.t1 MTR_1g008450 38.710 217 125 4 446 659 99 310 4.74e-38 144
MS.gene063172.t1 MTR_1g008580 37.714 175 102 4 488 660 1 170 1.36e-33 127
MS.gene063172.t1 MTR_5g034320 33.178 214 121 8 448 650 415 617 3.14e-25 111
MS.gene063172.t1 MTR_8g064560 32.301 226 125 7 448 659 412 623 1.91e-24 108
MS.gene063172.t1 MTR_8g064500 32.432 222 112 7 448 650 159 361 2.33e-24 105
MS.gene063172.t1 MTR_3g078090 32.719 217 118 6 448 650 413 615 5.03e-24 107
MS.gene063172.t1 MTR_8g064530 31.532 222 134 6 448 660 429 641 6.67e-24 107
MS.gene063172.t1 MTR_4g069540 56.000 75 33 0 434 508 20 94 4.34e-22 92.0
MS.gene063172.t1 MTR_4g133840 32.642 193 108 6 471 660 14 187 1.94e-21 92.8
MS.gene063172.t1 MTR_8g046000 32.110 218 122 7 448 663 31 224 3.08e-21 93.6
MS.gene063172.t1 MTR_5g033350 28.497 193 121 5 474 659 16 198 1.58e-19 87.8
MS.gene063172.t1 MTR_8g445140 36.478 159 89 6 504 661 155 302 2.92e-19 89.4
MS.gene063172.t1 MTR_5g033340 29.348 184 113 5 474 650 195 368 1.93e-18 88.2
MS.gene063172.t1 MTR_5g033340 30.000 160 95 5 491 643 4 153 7.13e-15 77.4
MS.gene063172.t1 MTR_8g445170 34.177 158 92 5 505 661 237 383 4.20e-18 87.4
MS.gene063172.t1 MTR_8g045890 34.667 150 88 5 512 661 292 431 1.16e-17 86.7
MS.gene063172.t1 MTR_5g033330 28.804 184 114 5 474 650 434 607 1.19e-17 87.4
MS.gene063172.t1 MTR_5g033330 28.814 177 109 5 474 643 226 392 2.19e-15 80.1
MS.gene063172.t1 MTR_5g033330 28.249 177 110 5 474 643 18 184 8.42e-15 78.2
MS.gene063172.t1 MTR_8g045890 34.667 150 88 5 512 661 333 472 2.16e-17 85.9
MS.gene063172.t1 MTR_8g045890 34.667 150 88 5 512 661 370 509 2.70e-17 85.9
MS.gene063172.t1 MTR_8g045880 33.333 141 84 4 521 661 184 314 8.00e-15 76.6
MS.gene063172.t1 MTR_8g045880 33.333 141 84 4 521 661 221 351 9.70e-15 76.6
MS.gene063172.t1 MTR_8g045880 33.333 141 84 4 521 661 219 349 1.24e-14 76.3
MS.gene063172.t1 MTR_1g045860 32.000 150 93 4 512 661 119 259 1.17e-13 72.0
MS.gene063172.t1 MTR_8g075930 38.667 75 43 2 578 650 14 87 4.34e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063172.t1 AT1G49320 33.942 274 165 6 399 660 9 278 2.40e-44 160
MS.gene063172.t1 AT5G25610 38.073 218 125 6 448 659 176 389 6.39e-39 148
MS.gene063172.t1 AT1G70370 32.727 220 134 6 448 660 411 623 2.35e-25 111
MS.gene063172.t1 AT1G70370 32.727 220 134 6 448 660 411 623 2.35e-25 111
MS.gene063172.t1 AT1G23760 33.166 199 113 5 471 660 432 619 3.50e-24 108
MS.gene063172.t1 AT1G60390 29.798 198 117 5 472 659 435 620 2.19e-21 99.4

Find 191 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAATCAAGTTTATCTTGA+TGG 0.211968 3.2:-91861201 MS.gene063172:CDS
AGGATATCTATGCTCCTAAA+TGG 0.228868 3.2:-91860276 MS.gene063172:CDS
GAATTTGTTCATAGTGTTCT+TGG 0.231624 3.2:-91860388 MS.gene063172:CDS
TTTGCAGAACTACACCATTT+TGG 0.234201 3.2:-91860308 MS.gene063172:CDS
TCCCTGTAAAGCACGTTCTA+TGG 0.238519 3.2:-91860036 MS.gene063172:CDS
GTCTTTCATGTCTTCACCTT+GGG 0.240047 3.2:+91860486 None:intergenic
TCCAATCAAGTTTATCTTGA+TGG 0.240985 3.2:-91860994 MS.gene063172:CDS
GATAAACTTGATTGAAGTTT+GGG 0.247881 3.2:+91861208 None:intergenic
AGGTCTTCAAAGTTCTTCTA+AGG 0.253474 3.2:-91860186 MS.gene063172:CDS
ATCCTTTGAGATTTCCAAAA+TGG 0.256902 3.2:+91860294 None:intergenic
GATAAACTTGATTGGAGTTT+GGG 0.256939 3.2:+91861001 None:intergenic
TCTAATCAAGTTTATCTTGA+TGG 0.268313 3.2:-91860925 MS.gene063172:CDS
GATAAACTTGATTAGAGTTT+GGG 0.274295 3.2:+91860932 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3.2:+91861070 None:intergenic
GATAAACTTGGTTGGAGTTT+GGG 0.274888 3.2:+91861553 None:intergenic
TCCAATCGAGTTTATCTTGA+TGG 0.276513 3.2:-91861339 MS.gene063172:CDS
GGGTGACAAGCTACCCATTT+AGG 0.279438 3.2:+91860262 None:intergenic
TCCAACCAAGTTTATCTTGA+TGG 0.283723 3.2:-91861063 MS.gene063172:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3.2:-91860856 MS.gene063172:CDS
TCCAATCAAGTTTACCTTGA+TGG 0.284115 3.2:-91861132 MS.gene063172:CDS
GCGAACTCCATGAAGAAAAT+TGG 0.289076 3.2:-91860742 MS.gene063172:CDS
GCCCATAGAACGTGCTTTAC+AGG 0.291191 3.2:+91860034 None:intergenic
TACAATCAAGTTTACCTTGA+TGG 0.294768 3.2:-91861477 MS.gene063172:CDS
TCTAATCAAGTTTACCTTGA+TGG 0.295765 3.2:-91861615 MS.gene063172:CDS
AGATAAACTTGATTGAAGTT+TGG 0.296038 3.2:+91861207 None:intergenic
TCCAATCAAGTTTACCTTGA+TGG 0.298027 3.2:-91861270 MS.gene063172:CDS
AGATAAACTTGGTTGGAGTT+TGG 0.299383 3.2:+91861069 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.299708 3.2:-91860787 MS.gene063172:CDS
AGATAAACTTGATTGGAGTT+TGG 0.300825 3.2:+91861000 None:intergenic
GTTGATCAGCCTTACCTTGA+TGG 0.301941 3.2:-91861954 MS.gene063172:CDS
AGATAAACTTGATTAGAGTT+TGG 0.304429 3.2:+91860931 None:intergenic
AGATAAACTTGGTTGGAGTT+TGG 0.312080 3.2:+91861552 None:intergenic
AGTTGTGTGAATGTTATATT+TGG 0.312223 3.2:+91860357 None:intergenic
TTACCTAGATGGATGGTTAA+AGG 0.317562 3.2:-91861742 MS.gene063172:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3.2:+91860862 None:intergenic
AGGTAAACTTGATTGGAGTT+AGG 0.321370 3.2:+91861276 None:intergenic
AGGTAAACTTGATTGTAGTT+AGG 0.321428 3.2:+91861483 None:intergenic
AGGTAAACTTGATTAGAGTT+AGG 0.324677 3.2:+91861621 None:intergenic
TGGAGACATAATGGATGCTT+TGG 0.329852 3.2:-91860155 MS.gene063172:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.334772 3.2:+91861690 None:intergenic
CTCAATCAGGCTTACCTTGA+TGG 0.351388 3.2:-91861408 MS.gene063172:CDS
TCTAATCCAAGTTATCTTGA+TGG 0.360948 3.2:-91861891 MS.gene063172:CDS
AGTTGAAATATAAAATGATT+AGG 0.362732 3.2:+91860100 None:intergenic
GGTAAACTTGATTGTAGTTA+GGG 0.371166 3.2:+91861484 None:intergenic
TCCAATCAAGTTTACCTAGA+TGG 0.372314 3.2:-91861753 MS.gene063172:CDS
TTGGTTCAGTTGGTGGCCTC+TGG 0.375839 3.2:+91860001 None:intergenic
GTTCTTCTAAGGGGTCAATA+TGG 0.383693 3.2:-91860175 MS.gene063172:CDS
TCGATCTTGCTTTCTCAACT+TGG 0.386255 3.2:+91861025 None:intergenic
ACCAATCAAGTTTACCTAGA+TGG 0.387215 3.2:-91861822 MS.gene063172:CDS
AGGTAAACTTGATTGGAGTT+AGG 0.390322 3.2:+91861138 None:intergenic
TGGCAGTAGTAAAGAGCATA+AGG 0.391483 3.2:+91860229 None:intergenic
CTAGTTCCCTTTGGTTCAGT+TGG 0.397858 3.2:+91859991 None:intergenic
TTGATCTTGCCTTCTCAACT+TGG 0.398535 3.2:+91861094 None:intergenic
ACTATGGATGATCTTTATGT+AGG 0.401691 3.2:-91860643 MS.gene063172:CDS
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3.2:+91860863 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3.2:+91861277 None:intergenic
GGTAAACTTGATTGGAGTTA+GGG 0.403936 3.2:+91861691 None:intergenic
TCGATCTTGCTTTCTCAACT+TGG 0.408406 3.2:+91860956 None:intergenic
GAGAATAGTTGAAGAAGGCT+TGG 0.410178 3.2:+91860526 None:intergenic
TCCAATCAAGTTTACCTTGA+CGG 0.412584 3.2:-91861684 MS.gene063172:CDS
GTTCCCTTTGGTTCAGTTGG+TGG 0.415275 3.2:+91859994 None:intergenic
TGAGAGAGAATAGTTGAAGA+AGG 0.421944 3.2:+91860521 None:intergenic
GGTAAACTTGATTAGAGTTA+GGG 0.423201 3.2:+91861622 None:intergenic
AACCATCCATCAAGATAACT+TGG 0.424143 3.2:+91861885 None:intergenic
CGTGCTTTACAGGGAAGAAA+TGG 0.426994 3.2:+91860044 None:intergenic
CTAACTTGAATGCCTTTGTA+TGG 0.427506 3.2:+91860674 None:intergenic
ATCAGCCTTACCTTGATGGC+TGG 0.428156 3.2:-91861950 MS.gene063172:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.430236 3.2:+91861752 None:intergenic
TTGGTGGCCTCTGGTGGGAG+TGG 0.432130 3.2:+91860010 None:intergenic
CAACTACTTGGAATGAAGCC+TGG 0.433769 3.2:-91860082 MS.gene063172:CDS
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3.2:+91860855 None:intergenic
TCCATCAAGGTAAACTTGAT+TGG 0.436782 3.2:+91861131 None:intergenic
GTTCAGTTGGTGGCCTCTGG+TGG 0.441778 3.2:+91860004 None:intergenic
TATCTTTCAACCATCCATCT+AGG 0.444354 3.2:+91861808 None:intergenic
TGTCTTTCATGTCTTCACCT+TGG 0.444739 3.2:+91860485 None:intergenic
AACTTGATTGTAGTTAGGGT+TGG 0.447399 3.2:+91861488 None:intergenic
GAAAGATACCAAGGATCAAA+TGG 0.449700 3.2:-91860827 MS.gene063172:CDS
GCCATCAAGGTAAACTTGAT+TGG 0.450457 3.2:+91861269 None:intergenic
AACTATCCACAACCTCAATC+AGG 0.453031 3.2:-91861421 MS.gene063172:CDS
AAGTTAGCATATTCTCTGAT+AGG 0.453535 3.2:+91860598 None:intergenic
GTGAATTTGAACCCACAAAA+GGG 0.456334 3.2:-91860450 MS.gene063172:CDS
GGTAAGCCTGATTGAGGTTG+TGG 0.457575 3.2:+91861415 None:intergenic
CAAGACATGGCAGAATCAAA+AGG 0.457794 3.2:-91860718 MS.gene063172:CDS
ACCAATACACAACCTCAATC+AGG 0.459181 3.2:-91860800 MS.gene063172:CDS
TCCGTCAAGGTAAACTTGAT+TGG 0.460129 3.2:+91861683 None:intergenic
TCCATCAAGATAAACTTGAT+TGG 0.461282 3.2:+91860993 None:intergenic
GAAAGACACCAAAGATCAAA+AGG 0.461407 3.2:-91861448 MS.gene063172:CDS
ATCAAGTTTACCTTGATGGC+TGG 0.461599 3.2:-91861473 MS.gene063172:CDS
GGGTCAATATGGAGACATAA+TGG 0.464907 3.2:-91860164 MS.gene063172:CDS
TCCAACCAAGTTTATCTTGA+CGG 0.468204 3.2:-91861546 MS.gene063172:CDS
TGTGAATTTGAACCCACAAA+AGG 0.468537 3.2:-91860451 MS.gene063172:CDS
AGAGCATAAGGGTAAGGCCT+AGG 0.470306 3.2:+91860241 None:intergenic
AACTACTTGGAATGAAGCCT+GGG 0.472218 3.2:-91860081 MS.gene063172:CDS
TCCATCTAGGTAAACTTGAT+TGG 0.472763 3.2:+91861821 None:intergenic
ACTAGCTATCCCACAACATC+AGG 0.475940 3.2:-91860337 MS.gene063172:CDS
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3.2:+91860867 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3.2:+91861281 None:intergenic
AACTTGATTGGAGTTAGGGG+TGG 0.478066 3.2:+91861695 None:intergenic
CCCTGTAAAGCACGTTCTAT+GGG 0.478082 3.2:-91860035 MS.gene063172:CDS
CTATGGATGATCTTTATGTA+GGG 0.478680 3.2:-91860642 MS.gene063172:CDS
GGTAGTTGCGACTTGGAGAA+AGG 0.479066 3.2:+91860547 None:intergenic
GCCTGATTGAGGTTGTGTAT+TGG 0.481303 3.2:+91860799 None:intergenic
GGAGACATAATGGATGCTTT+GGG 0.482669 3.2:-91860154 MS.gene063172:CDS
CTACCTAGACATAGGGAGTA+AGG 0.491781 3.2:-91860206 MS.gene063172:CDS
ATCAGGCTTACCTTGATGGT+TGG 0.493059 3.2:-91860783 MS.gene063172:CDS
TAATGAAGTAGGACAAGCTT+TGG 0.493432 3.2:+91860423 None:intergenic
TTCAGTTGGTGGCCTCTGGT+GGG 0.494537 3.2:+91860005 None:intergenic
GATAAACTCGATTGGAGTTG+TGG 0.497172 3.2:+91861346 None:intergenic
ATCAAGTTTACCTTGATGGC+TGG 0.497883 3.2:-91861266 MS.gene063172:CDS
TATCCTTTAACCATCCATCT+AGG 0.498476 3.2:+91861739 None:intergenic
GAAAGATACCAAGAATCAAA+AGG 0.504634 3.2:-91861793 MS.gene063172:CDS
ATCAGGCTTACCTTGATGGC+TGG 0.504911 3.2:-91861404 MS.gene063172:CDS
GGATATCTATGCTCCTAAAT+GGG 0.506971 3.2:-91860275 MS.gene063172:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.507762 3.2:-91860921 MS.gene063172:CDS
AAGGCTTGGTAGTTGCGACT+TGG 0.508594 3.2:+91860540 None:intergenic
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3.2:-91860990 MS.gene063172:CDS
ATCAAGTTTATCTTGATGGA+TGG 0.510245 3.2:-91861197 MS.gene063172:CDS
ATAAACTCGATTGGAGTTGT+GGG 0.512497 3.2:+91861347 None:intergenic
CCAACCAAGTTTATCTTGAC+GGG 0.512790 3.2:-91861545 MS.gene063172:CDS
TGTCTTTCAACCAGCCATCA+AGG 0.516147 3.2:+91861463 None:intergenic
CATCTTTCAGCCAGCCATCA+AGG 0.517526 3.2:+91861256 None:intergenic
ACCATCCATCAAGATAAACT+TGG 0.519057 3.2:+91861058 None:intergenic
TGGCTGGTTAAAAGATAGTC+GGG 0.523097 3.2:-91861388 MS.gene063172:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.523440 3.2:-91861611 MS.gene063172:CDS
ATCGAGTTTATCTTGATGGA+TGG 0.523903 3.2:-91861335 MS.gene063172:CDS
TTAAGCCAGCCATCAAGGTA+AGG 0.525753 3.2:+91861945 None:intergenic
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3.2:-91860852 MS.gene063172:CDS
ACCAAGTTTATCTTGATGGA+TGG 0.525923 3.2:-91861059 MS.gene063172:CDS
ATCAAGTTTACCTTGATGGA+TGG 0.525923 3.2:-91861128 MS.gene063172:CDS
GATTCATGTCAGACGTGTCT+AGG 0.529464 3.2:+91860122 None:intergenic
ATGGCTGGTTAAAAGATAGT+CGG 0.532803 3.2:-91861389 MS.gene063172:CDS
TCTTTCATGTCTTCACCTTG+GGG 0.533710 3.2:+91860487 None:intergenic
ATAAACTTGGTTGGAGTTTG+GGG 0.533931 3.2:+91861071 None:intergenic
TAGTAAAGAGCATAAGGGTA+AGG 0.534900 3.2:+91860235 None:intergenic
AACTCGATTGGAGTTGTGGG+TGG 0.536216 3.2:+91861350 None:intergenic
GGTCTTCAAAGTTCTTCTAA+GGG 0.536641 3.2:-91860185 MS.gene063172:CDS
AATGGGTAGCTTGTCACCCT+AGG 0.538892 3.2:-91860258 MS.gene063172:CDS
AACTTGATTGGAGTTAGGAG+TGG 0.538945 3.2:+91861143 None:intergenic
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3.2:-91860910 MS.gene063172:CDS
CTTGATGGATGGTTGAAAGA+TGG 0.539962 3.2:-91861048 MS.gene063172:CDS
ATAAACTTGGTTGGAGTTTG+GGG 0.540923 3.2:+91861554 None:intergenic
GGTAAACTTGATTGGTGTTG+TGG 0.546018 3.2:+91861829 None:intergenic
GAAAGATAGCCAAGTTGAGA+AGG 0.546728 3.2:-91861103 MS.gene063172:CDS
GGCAGTAGTAAAGAGCATAA+GGG 0.547129 3.2:+91860230 None:intergenic
TCCATCAAGATAAACTCGAT+TGG 0.551426 3.2:+91861338 None:intergenic
GAGCATAAGGGTAAGGCCTA+GGG 0.551678 3.2:+91860242 None:intergenic
ATCCAAGTTATCTTGATGGA+TGG 0.552457 3.2:-91861887 MS.gene063172:CDS
GGTAAACTTGATTGGAGTCG+TGG 0.553661 3.2:+91861760 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.553950 3.2:+91860842 None:intergenic
CAAACGTGCACCTGATGTTG+TGG 0.555390 3.2:+91860327 None:intergenic
CCCATAGAACGTGCTTTACA+GGG 0.559017 3.2:+91860035 None:intergenic
ATCAAGTTTACCTTGACGGA+TGG 0.560773 3.2:-91861680 MS.gene063172:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.561030 3.2:-91861749 MS.gene063172:CDS
ATCAAGTTTACCTAGATGGA+TGG 0.563100 3.2:-91861818 MS.gene063172:CDS
TACTGCCACTACCTAGACAT+AGG 0.566616 3.2:-91860214 MS.gene063172:CDS
AAGACATGGCAGAATCAAAA+GGG 0.567319 3.2:-91860717 MS.gene063172:CDS
ACCACCCGTCAAGATAAACT+TGG 0.569100 3.2:+91861541 None:intergenic
TCCATCAAGATAAACTTGGT+TGG 0.570341 3.2:+91861062 None:intergenic
TACTCCCTATGTCTAGGTAG+TGG 0.570771 3.2:+91860209 None:intergenic
ACTGCCACTACCTAGACATA+GGG 0.575542 3.2:-91860213 MS.gene063172:CDS
GTAAACTTGATTGGAGTCGT+GGG 0.579561 3.2:+91861761 None:intergenic
ACTCGATTGGAGTTGTGGGT+GGG 0.582962 3.2:+91861351 None:intergenic
AGACCTTACTCCCTATGTCT+AGG 0.584376 3.2:+91860203 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3.2:+91860788 None:intergenic
CATCAAGGTAAGCCTGATTG+AGG 0.584619 3.2:+91861409 None:intergenic
AGTCTTTCAACCAACCATCA+AGG 0.584877 3.2:+91860773 None:intergenic
CTCACAAACGATTCTCCCCA+AGG 0.585857 3.2:-91860502 MS.gene063172:CDS
TATCTTTCAACCATCCATCA+AGG 0.588448 3.2:+91861118 None:intergenic
TATCTTTCAACCATCCATCA+AGG 0.588448 3.2:+91861601 None:intergenic
AGCATGGACTCTAATGAAGT+AGG 0.591847 3.2:+91860412 None:intergenic
CCCGTCAAGATAAACTTGGT+TGG 0.599307 3.2:+91861545 None:intergenic
AAACGTGCACCTGATGTTGT+GGG 0.607189 3.2:+91860328 None:intergenic
ACTATGAACAAATTCAAGCA+TGG 0.607524 3.2:+91860396 None:intergenic
AAAGATAGCCAAGTTGAGCA+AGG 0.607835 3.2:-91861171 MS.gene063172:CDS
GTCTTCAAAGTTCTTCTAAG+GGG 0.613953 3.2:-91860184 MS.gene063172:CDS
ATAAACTTGATTAGAGTTTG+GGG 0.616239 3.2:+91860933 None:intergenic
ATAAACTTGATTGGAGTTTG+GGG 0.619713 3.2:+91861002 None:intergenic
ACAGGGAAGAAATGGCACAT+AGG 0.619730 3.2:+91860052 None:intergenic
TGGCACATAGGAGCTTCCCC+AGG 0.628176 3.2:+91860064 None:intergenic
ATGGGCACCACTCCCACCAG+AGG 0.630918 3.2:-91860017 MS.gene063172:CDS
TTCAAAAGTTGACCATACAA+AGG 0.632099 3.2:-91860686 MS.gene063172:CDS
TGAATTTGAACCCACAAAAG+GGG 0.632371 3.2:-91860449 MS.gene063172:CDS
ATAAACTTGATTGAAGTTTG+GGG 0.634939 3.2:+91861209 None:intergenic
ACCAAGTTTATCTTGACGGG+TGG 0.636426 3.2:-91861542 MS.gene063172:CDS
GAAGAAAATTGGACAAGACA+TGG 0.638239 3.2:-91860731 MS.gene063172:CDS
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3.2:+91860864 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3.2:+91861278 None:intergenic
GTAAACTTGATTGGAGTTAG+GGG 0.649022 3.2:+91861692 None:intergenic
TCATGTCAGACGTGTCTAGG+TGG 0.678767 3.2:+91860125 None:intergenic
TGGATGGTTGAAAGATACCA+AGG 0.679634 3.2:-91860836 MS.gene063172:CDS
ACTACTTGGAATGAAGCCTG+GGG 0.737264 3.2:-91860080 MS.gene063172:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTGAAATATAAAATGATT+AGG + chr3.2:91861899-91861918 None:intergenic 15.0%
!!! CATTTTATATTTCAACTACT+TGG - chr3.2:91861902-91861921 MS.gene063172:CDS 20.0%
! AGATAAACTTGATTAGAGTT+TGG + chr3.2:91861068-91861087 None:intergenic 25.0%
! AGATAAACTTGATTGAAGTT+TGG + chr3.2:91860792-91860811 None:intergenic 25.0%
! AGTTGTGTGAATGTTATATT+TGG + chr3.2:91861642-91861661 None:intergenic 25.0%
! ATAAACTTGATTAGAGTTTG+GGG + chr3.2:91861066-91861085 None:intergenic 25.0%
! ATAAACTTGATTGAAGTTTG+GGG + chr3.2:91860790-91860809 None:intergenic 25.0%
! GATAAACTTGATTAGAGTTT+GGG + chr3.2:91861067-91861086 None:intergenic 25.0%
! GATAAACTTGATTGAAGTTT+GGG + chr3.2:91860791-91860810 None:intergenic 25.0%
! TCTAATCAAGTTTATCTTGA+TGG - chr3.2:91861071-91861090 MS.gene063172:CDS 25.0%
! TTCAATCAAGTTTATCTTGA+TGG - chr3.2:91860795-91860814 MS.gene063172:CDS 25.0%
!!! AGTTTTTTCCTTTTGATCTT+TGG + chr3.2:91860559-91860578 None:intergenic 25.0%
!!! ATAGCTTTTTTGTTTTCTTC+GGG + chr3.2:91860147-91860166 None:intergenic 25.0%
!!! GATAGCTTTTTTGTTTTCTT+CGG + chr3.2:91860148-91860167 None:intergenic 25.0%
!!! GGATTTTGTTTTTTGAACTT+GGG + chr3.2:91860283-91860302 None:intergenic 25.0%
!!! TGGATTTTGTTTTTTGAACT+TGG + chr3.2:91860284-91860303 None:intergenic 25.0%
!!! TTTAGTTTTTTGTTCTTCAG+TGG + chr3.2:91860084-91860103 None:intergenic 25.0%
AAGTTAGCATATTCTCTGAT+AGG + chr3.2:91861401-91861420 None:intergenic 30.0%
ACTATGAACAAATTCAAGCA+TGG + chr3.2:91861603-91861622 None:intergenic 30.0%
ACTATGGATGATCTTTATGT+AGG - chr3.2:91861353-91861372 MS.gene063172:CDS 30.0%
AGATAAACTTGATTGGAGTT+TGG + chr3.2:91860999-91861018 None:intergenic 30.0%
AGGTAAACTTGATTAGAGTT+AGG + chr3.2:91860378-91860397 None:intergenic 30.0%
AGGTAAACTTGATTGTAGTT+AGG + chr3.2:91860516-91860535 None:intergenic 30.0%
ATAAACTTGATTGGAGTTTG+GGG + chr3.2:91860997-91861016 None:intergenic 30.0%
ATCAAGTTTATCTTGATGGA+TGG - chr3.2:91860799-91860818 MS.gene063172:CDS 30.0%
CTATGGATGATCTTTATGTA+GGG - chr3.2:91861354-91861373 MS.gene063172:CDS 30.0%
GAAAGATACCAAGAATCAAA+AGG - chr3.2:91860203-91860222 MS.gene063172:CDS 30.0%
GATAAACTTGATTGGAGTTT+GGG + chr3.2:91860998-91861017 None:intergenic 30.0%
GGTAAACTTGATTAGAGTTA+GGG + chr3.2:91860377-91860396 None:intergenic 30.0%
GGTAAACTTGATTGTAGTTA+GGG + chr3.2:91860515-91860534 None:intergenic 30.0%
TACAATCAAGTTTACCTTGA+TGG - chr3.2:91860519-91860538 MS.gene063172:CDS 30.0%
TCCAATCAAGTTTATCTTGA+TGG - chr3.2:91861002-91861021 MS.gene063172:CDS 30.0%
TCCATCAAGATAAACTTGAT+TGG + chr3.2:91860799-91860818 None:intergenic 30.0%
TCTAATCAAGTTTACCTTGA+TGG - chr3.2:91860381-91860400 MS.gene063172:CDS 30.0%
TCTAATCCAAGTTATCTTGA+TGG - chr3.2:91860105-91860124 MS.gene063172:CDS 30.0%
TTCAAAAGTTGACCATACAA+AGG - chr3.2:91861310-91861329 MS.gene063172:CDS 30.0%
! GAATTTGTTCATAGTGTTCT+TGG - chr3.2:91861608-91861627 MS.gene063172:CDS 30.0%
! GAATTTTGCTTTCTCAACTT+GGG + chr3.2:91860352-91860371 None:intergenic 30.0%
! TGAATTTTGCTTTCTCAACT+TGG + chr3.2:91860353-91860372 None:intergenic 30.0%
! TGATTTTGCTTTCTCAAGTT+GGG + chr3.2:91860766-91860785 None:intergenic 30.0%
! TGGATTTTTCTTTCTCAACA+TGG + chr3.2:91860698-91860717 None:intergenic 30.0%
! TTGATTTTGCTTTCTCAAGT+TGG + chr3.2:91860767-91860786 None:intergenic 30.0%
!! AGTCTTTTCCTTTTGATTCT+TGG + chr3.2:91860214-91860233 None:intergenic 30.0%
!! ATCCTTTGAGATTTCCAAAA+TGG + chr3.2:91861705-91861724 None:intergenic 30.0%
!!! ATGTAGTCAGCTACTTTTTT+TGG + chr3.2:91861428-91861447 None:intergenic 30.0%
!!! CAAGTTAGCTTTTTTCACTA+TGG - chr3.2:91861337-91861356 MS.gene063172:CDS 30.0%
AACCATCCATCAAGATAACT+TGG + chr3.2:91860114-91860133 None:intergenic 35.0%
AACTTGATTGTAGTTAGGGT+TGG + chr3.2:91860511-91860530 None:intergenic 35.0%
AAGACATGGCAGAATCAAAA+GGG - chr3.2:91861279-91861298 MS.gene063172:CDS 35.0%
ACCAAGTTTATCTTGATGGA+TGG - chr3.2:91860937-91860956 MS.gene063172:CDS 35.0%
ACCAATCAAGTTTACCTAGA+TGG - chr3.2:91860174-91860193 MS.gene063172:CDS 35.0%
ACCATCCATCAAGATAAACT+TGG + chr3.2:91860665-91860684 None:intergenic 35.0%
AGATAAACTTGGTTGGAGTT+TGG + chr3.2:91860447-91860466 None:intergenic 35.0%
AGGATATCTATGCTCCTAAA+TGG - chr3.2:91861720-91861739 MS.gene063172:CDS 35.0%
AGGTAAACTTGATTGGAGTT+AGG + chr3.2:91860309-91860328 None:intergenic 35.0%
AGGTCTTCAAAGTTCTTCTA+AGG - chr3.2:91861810-91861829 MS.gene063172:CDS 35.0%
ATAAACTCGATTGGAGTTGT+GGG + chr3.2:91860652-91860671 None:intergenic 35.0%
ATAAACTTGGTTGGAGTTTG+GGG + chr3.2:91860445-91860464 None:intergenic 35.0%
ATCAAGTTTACCTAGATGGA+TGG - chr3.2:91860178-91860197 MS.gene063172:CDS 35.0%
ATCAAGTTTACCTTGATGGA+TGG - chr3.2:91860385-91860404 MS.gene063172:CDS 35.0%
ATCCAAGTTATCTTGATGGA+TGG - chr3.2:91860109-91860128 MS.gene063172:CDS 35.0%
ATCGAGTTTATCTTGATGGA+TGG - chr3.2:91860661-91860680 MS.gene063172:CDS 35.0%
CTAACTTGAATGCCTTTGTA+TGG + chr3.2:91861325-91861344 None:intergenic 35.0%
GAAAGACACCAAAGATCAAA+AGG - chr3.2:91860548-91860567 MS.gene063172:CDS 35.0%
GAAAGATACCAAGGATCAAA+TGG - chr3.2:91861169-91861188 MS.gene063172:CDS 35.0%
GAAGAAAATTGGACAAGACA+TGG - chr3.2:91861265-91861284 MS.gene063172:CDS 35.0%
GATAAACTTGGTTGGAGTTT+GGG + chr3.2:91860446-91860465 None:intergenic 35.0%
GGATATCTATGCTCCTAAAT+GGG - chr3.2:91861721-91861740 MS.gene063172:CDS 35.0%
GGTAAACTTGATTGGAGTTA+GGG + chr3.2:91860308-91860327 None:intergenic 35.0%
GGTCTTCAAAGTTCTTCTAA+GGG - chr3.2:91861811-91861830 MS.gene063172:CDS 35.0%
GTAAACTTGATTGGAGTTAG+GGG + chr3.2:91860307-91860326 None:intergenic 35.0%
GTCTTCAAAGTTCTTCTAAG+GGG - chr3.2:91861812-91861831 MS.gene063172:CDS 35.0%
GTGAATTTGAACCCACAAAA+GGG - chr3.2:91861546-91861565 MS.gene063172:CDS 35.0%
TAATGAAGTAGGACAAGCTT+TGG + chr3.2:91861576-91861595 None:intergenic 35.0%
TATCCTTTAACCATCCATCT+AGG + chr3.2:91860260-91860279 None:intergenic 35.0%
TATCTTTCAACCATCCATCA+AGG + chr3.2:91860398-91860417 None:intergenic 35.0%
TATCTTTCAACCATCCATCT+AGG + chr3.2:91860191-91860210 None:intergenic 35.0%
TCCAACCAAGTTTATCTTGA+CGG - chr3.2:91860450-91860469 MS.gene063172:CDS 35.0%
TCCAACCAAGTTTATCTTGA+TGG - chr3.2:91860450-91860469 MS.gene063172:CDS 35.0%
TCCAATCAAGTTTACCTAGA+TGG - chr3.2:91860243-91860262 MS.gene063172:CDS 35.0%
TCCAATCAAGTTTACCTTGA+CGG - chr3.2:91860312-91860331 MS.gene063172:CDS 35.0%
TCCAATCAAGTTTACCTTGA+TGG - chr3.2:91860312-91860331 MS.gene063172:CDS 35.0%
TCCAATCGAGTTTATCTTGA+TGG - chr3.2:91860657-91860676 MS.gene063172:CDS 35.0%
TCCATCAAGATAAACTCGAT+TGG + chr3.2:91860661-91860680 None:intergenic 35.0%
TCCATCAAGATAAACTTGGT+TGG + chr3.2:91860937-91860956 None:intergenic 35.0%
TCCATCAAGGTAAACTTGAT+TGG + chr3.2:91860385-91860404 None:intergenic 35.0%
TCCATCTAGGTAAACTTGAT+TGG + chr3.2:91860178-91860197 None:intergenic 35.0%
TGAATTTGAACCCACAAAAG+GGG - chr3.2:91861547-91861566 MS.gene063172:CDS 35.0%
TGAGAGAGAATAGTTGAAGA+AGG + chr3.2:91861478-91861497 None:intergenic 35.0%
TGTGAATTTGAACCCACAAA+AGG - chr3.2:91861545-91861564 MS.gene063172:CDS 35.0%
TTACCTAGATGGATGGTTAA+AGG - chr3.2:91860254-91860273 MS.gene063172:CDS 35.0%
! ATGGCTGGTTAAAAGATAGT+CGG - chr3.2:91860607-91860626 MS.gene063172:CDS 35.0%
! GTCTTGTCCAATTTTCTTCA+TGG + chr3.2:91861264-91861283 None:intergenic 35.0%
! TAGTAAAGAGCATAAGGGTA+AGG + chr3.2:91861764-91861783 None:intergenic 35.0%
! TATCTTTTAACCAGCCATCA+AGG + chr3.2:91860605-91860624 None:intergenic 35.0%
! TCGATTTTGCTTTCTCATCT+TGG + chr3.2:91860422-91860441 None:intergenic 35.0%
! TGGATTTTACTTGCTCAACT+TGG + chr3.2:91861112-91861131 None:intergenic 35.0%
! TGGATTTTTCTTTCTCAGCA+TGG + chr3.2:91860491-91860510 None:intergenic 35.0%
! TGGTTTTTCCATTTGATCCT+TGG + chr3.2:91861180-91861199 None:intergenic 35.0%
! TTTGCAGAACTACACCATTT+TGG - chr3.2:91861688-91861707 MS.gene063172:CDS 35.0%
!! CACCATTTTGGAAATCTCAA+AGG - chr3.2:91861700-91861719 MS.gene063172:CDS 35.0%
!! GTATGGTCAACTTTTGAAGA+TGG + chr3.2:91861308-91861327 None:intergenic 35.0%
AACTACTTGGAATGAAGCCT+GGG - chr3.2:91861915-91861934 MS.gene063172:CDS 40.0%
AACTATCCACAACCTCAATC+AGG - chr3.2:91860575-91860594 MS.gene063172:CDS 40.0%
AACTTGATTGGAGTTAGGAG+TGG + chr3.2:91860856-91860875 None:intergenic 40.0%
ACCAATACACAACCTCAATC+AGG - chr3.2:91861196-91861215 MS.gene063172:CDS 40.0%
AGCATGGACTCTAATGAAGT+AGG + chr3.2:91861587-91861606 None:intergenic 40.0%
AGTCTTTCAACCAACCATCA+AGG + chr3.2:91861226-91861245 None:intergenic 40.0%
ATCAAGTTTACCTTGACGGA+TGG - chr3.2:91860316-91860335 MS.gene063172:CDS 40.0%
CAAGACATGGCAGAATCAAA+AGG - chr3.2:91861278-91861297 MS.gene063172:CDS 40.0%
CCAACCAAGTTTATCTTGAC+GGG - chr3.2:91860451-91860470 MS.gene063172:CDS 40.0%
GAGAATAGTTGAAGAAGGCT+TGG + chr3.2:91861473-91861492 None:intergenic 40.0%
GATAAACTCGATTGGAGTTG+TGG + chr3.2:91860653-91860672 None:intergenic 40.0%
GCCATCAAGGTAAACTTGAT+TGG + chr3.2:91860523-91860542 None:intergenic 40.0%
GCGAACTCCATGAAGAAAAT+TGG - chr3.2:91861254-91861273 MS.gene063172:CDS 40.0%
GGGTCAATATGGAGACATAA+TGG - chr3.2:91861832-91861851 MS.gene063172:CDS 40.0%
GTAAACTTGATTGGAGTCGT+GGG + chr3.2:91860238-91860257 None:intergenic 40.0%
GTCTTTCATGTCTTCACCTT+GGG + chr3.2:91861513-91861532 None:intergenic 40.0%
TCCGTCAAGGTAAACTTGAT+TGG + chr3.2:91860316-91860335 None:intergenic 40.0%
TCGATCTTGCTTTCTCAACT+TGG + chr3.2:91860974-91860993 None:intergenic 40.0%
TCTTTCATGTCTTCACCTTG+GGG + chr3.2:91861512-91861531 None:intergenic 40.0%
TGGATGGTTGAAAGATACCA+AGG - chr3.2:91860194-91860213 MS.gene063172:CDS 40.0%
TGTCTTTCATGTCTTCACCT+TGG + chr3.2:91861514-91861533 None:intergenic 40.0%
TTGATCTTGCCTTCTCAACT+TGG + chr3.2:91860905-91860924 None:intergenic 40.0%
! AAAGATAGCCAAGTTGAGCA+AGG - chr3.2:91860825-91860844 MS.gene063172:CDS 40.0%
! ATCAAGTTTACCTTGATGGC+TGG - chr3.2:91860523-91860542 MS.gene063172:CDS 40.0%
! CTTGATGGATGGTTGAAAGA+TGG - chr3.2:91860120-91860139 MS.gene063172:CDS 40.0%
! GAAAGATAGCCAAGTTGAGA+AGG - chr3.2:91860893-91860912 MS.gene063172:CDS 40.0%
! GGCAGTAGTAAAGAGCATAA+GGG + chr3.2:91861769-91861788 None:intergenic 40.0%
! GTTCTTCTAAGGGGTCAATA+TGG - chr3.2:91861821-91861840 MS.gene063172:CDS 40.0%
! TATCTTTTAGCCATCCGTCA+AGG + chr3.2:91860329-91860348 None:intergenic 40.0%
! TGGATTTTCCTTGCTCAACT+TGG + chr3.2:91860836-91860855 None:intergenic 40.0%
! TGGCAGTAGTAAAGAGCATA+AGG + chr3.2:91861770-91861789 None:intergenic 40.0%
! TGGCTGGTTAAAAGATAGTC+GGG - chr3.2:91860608-91860627 MS.gene063172:CDS 40.0%
!! GGAGACATAATGGATGCTTT+GGG - chr3.2:91861842-91861861 MS.gene063172:CDS 40.0%
!! GGTAAACTTGATTGGTGTTG+TGG + chr3.2:91860170-91860189 None:intergenic 40.0%
!! TGGAGACATAATGGATGCTT+TGG - chr3.2:91861841-91861860 MS.gene063172:CDS 40.0%
!! TGTTTTTAAGCCAGCCATCA+AGG + chr3.2:91860059-91860078 None:intergenic 40.0%
AAACGTGCACCTGATGTTGT+GGG + chr3.2:91861671-91861690 None:intergenic 45.0%
AACTTGATTGGAGTTAGGGG+TGG + chr3.2:91860304-91860323 None:intergenic 45.0%
ACAGGGAAGAAATGGCACAT+AGG + chr3.2:91861947-91861966 None:intergenic 45.0%
ACCAAGTTTATCTTGACGGG+TGG - chr3.2:91860454-91860473 MS.gene063172:CDS 45.0%
ACCACCCGTCAAGATAAACT+TGG + chr3.2:91860458-91860477 None:intergenic 45.0%
ACTACTTGGAATGAAGCCTG+GGG - chr3.2:91861916-91861935 MS.gene063172:CDS 45.0%
ACTAGCTATCCCACAACATC+AGG - chr3.2:91861659-91861678 MS.gene063172:CDS 45.0%
ACTGCCACTACCTAGACATA+GGG - chr3.2:91861783-91861802 MS.gene063172:CDS 45.0%
AGACCTTACTCCCTATGTCT+AGG + chr3.2:91861796-91861815 None:intergenic 45.0%
CAACTACTTGGAATGAAGCC+TGG - chr3.2:91861914-91861933 MS.gene063172:CDS 45.0%
CATCAAGGTAAGCCTGATTG+AGG + chr3.2:91860590-91860609 None:intergenic 45.0%
CCCATAGAACGTGCTTTACA+GGG + chr3.2:91861964-91861983 None:intergenic 45.0%
CCCGTCAAGATAAACTTGGT+TGG + chr3.2:91860454-91860473 None:intergenic 45.0%
CCCTGTAAAGCACGTTCTAT+GGG - chr3.2:91861961-91861980 MS.gene063172:CDS 45.0%
CGTGCTTTACAGGGAAGAAA+TGG + chr3.2:91861955-91861974 None:intergenic 45.0%
CTACCTAGACATAGGGAGTA+AGG - chr3.2:91861790-91861809 MS.gene063172:CDS 45.0%
CTCAATCAGGCTTACCTTGA+TGG - chr3.2:91860588-91860607 MS.gene063172:CDS 45.0%
GATTCATGTCAGACGTGTCT+AGG + chr3.2:91861877-91861896 None:intergenic 45.0%
GCCTGATTGAGGTTGTGTAT+TGG + chr3.2:91861200-91861219 None:intergenic 45.0%
GGTAAACTTGATTGGAGTCG+TGG + chr3.2:91860239-91860258 None:intergenic 45.0%
GTTGATCAGCCTTACCTTGA+TGG - chr3.2:91860042-91860061 MS.gene063172:CDS 45.0%
TACTCCCTATGTCTAGGTAG+TGG + chr3.2:91861790-91861809 None:intergenic 45.0%
TACTGCCACTACCTAGACAT+AGG - chr3.2:91861782-91861801 MS.gene063172:CDS 45.0%
TCCCTGTAAAGCACGTTCTA+TGG - chr3.2:91861960-91861979 MS.gene063172:CDS 45.0%
TGTCTTTCAACCAGCCATCA+AGG + chr3.2:91860536-91860555 None:intergenic 45.0%
TTAAGCCAGCCATCAAGGTA+AGG + chr3.2:91860054-91860073 None:intergenic 45.0%
! ATCAGGCTTACCTTGATGGT+TGG - chr3.2:91861213-91861232 MS.gene063172:CDS 45.0%
AACTCGATTGGAGTTGTGGG+TGG + chr3.2:91860649-91860668 None:intergenic 50.0%
ACTCGATTGGAGTTGTGGGT+GGG + chr3.2:91860648-91860667 None:intergenic 50.0%
AGAGCATAAGGGTAAGGCCT+AGG + chr3.2:91861758-91861777 None:intergenic 50.0%
CAAACGTGCACCTGATGTTG+TGG + chr3.2:91861672-91861691 None:intergenic 50.0%
CATCTTTCAGCCAGCCATCA+AGG + chr3.2:91860743-91860762 None:intergenic 50.0%
CTCACAAACGATTCTCCCCA+AGG - chr3.2:91861494-91861513 MS.gene063172:CDS 50.0%
GAGCATAAGGGTAAGGCCTA+GGG + chr3.2:91861757-91861776 None:intergenic 50.0%
GCCCATAGAACGTGCTTTAC+AGG + chr3.2:91861965-91861984 None:intergenic 50.0%
GGGTGACAAGCTACCCATTT+AGG + chr3.2:91861737-91861756 None:intergenic 50.0%
GGTAAGCCTGATTGAGGTTG+TGG + chr3.2:91860584-91860603 None:intergenic 50.0%
TCATGTCAGACGTGTCTAGG+TGG + chr3.2:91861874-91861893 None:intergenic 50.0%
! AAGGCTTGGTAGTTGCGACT+TGG + chr3.2:91861459-91861478 None:intergenic 50.0%
! AATGGGTAGCTTGTCACCCT+AGG - chr3.2:91861738-91861757 MS.gene063172:CDS 50.0%
! ATCAGCCTTACCTTGATGGC+TGG - chr3.2:91860046-91860065 MS.gene063172:CDS 50.0%
! ATCAGGCTTACCTTGATGGC+TGG - chr3.2:91860592-91860611 MS.gene063172:CDS 50.0%
! GCTTTGGTCTCCCCTTTTGT+GGG + chr3.2:91861560-91861579 None:intergenic 50.0%
! GGTAGTTGCGACTTGGAGAA+AGG + chr3.2:91861452-91861471 None:intergenic 50.0%
!! AGCTTTGGTCTCCCCTTTTG+TGG + chr3.2:91861561-91861580 None:intergenic 50.0%
TGGCACATAGGAGCTTCCCC+AGG + chr3.2:91861935-91861954 None:intergenic 60.0%
ATGGGCACCACTCCCACCAG+AGG - chr3.2:91861979-91861998 MS.gene063172:CDS 65.0%
! TTGGTGGCCTCTGGTGGGAG+TGG + chr3.2:91861989-91862008 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 91860006 91862012 91860006 ID=MS.gene063172
chr3.2 mRNA 91860006 91862012 91860006 ID=MS.gene063172.t1;Parent=MS.gene063172
chr3.2 exon 91860006 91862012 91860006 ID=MS.gene063172.t1.exon1;Parent=MS.gene063172.t1
chr3.2 CDS 91860006 91862012 91860006 ID=cds.MS.gene063172.t1;Parent=MS.gene063172.t1
Gene Sequence

>MS.gene063172

ATGAAGCTTCAGCACGAGAATGTAGAAGAAAAACAAGTTGATCAGCCTTACCTTGATGGCTGGCTTAAAAACAGTCCACTGAAGAACAAAAAACTAAACTCTAATCCAAGTTATCTTGATGGATGGTTGAAAGATGCTCCCGAAGAAAACAAAAAAGCTATCCACAACACCAATCAAGTTTACCTAGATGGATGGTTGAAAGATACCAAGAATCAAAAGGAAAAGACTACCCACGACTCCAATCAAGTTTACCTAGATGGATGGTTAAAGGATACCCAAGTTCAAAAAACAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGACGGATGGCTAAAAGATACCCAAGTTGAGAAAGCAAAATTCATCCCTAACTCTAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGATGAGAAAGCAAAATCGACCCCAAACTCCAACCAAGTTTATCTTGACGGGTGGTTGAAAGATAGCCATGCTGAGAAAGAAAAATCCAACCCTAACTACAATCAAGTTTACCTTGATGGCTGGTTGAAAGACACCAAAGATCAAAAGGAAAAAACTATCCACAACCTCAATCAGGCTTACCTTGATGGCTGGTTAAAAGATAGTCGGGTTGAGAGAGCAAAACCCACCCACAACTCCAATCGAGTTTATCTTGATGGATGGTTGAAAGATAGCCATGTTGAGAAAGAAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGCTGGCTGAAAGATGCCCAACTTGAGAAAGCAAAATCAACCCCAAACTTCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGCAAGGAAAATCCACTCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAGGCAAGATCAACCCCAAACTCCAACCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCCAATCAAGTTTATCTTGATGGATGGTTGAAAGATAGCCAAGTTGAGAAAGCAAGATCGACCCCAAACTCTAATCAAGTTTATCTTGATGGATGGTTGAAAGATGGCCAAGTTGAGCAAGTAAAATCCACCCCTAACTCCAATCAAGTTTACCTTGATGGATGGTTGAAAGATACCAAGGATCAAATGGAAAAACCAATACACAACCTCAATCAGGCTTACCTTGATGGTTGGTTGAAAGACTCGCATGCAGCGAACTCCATGAAGAAAATTGGACAAGACATGGCAGAATCAAAAGGGAAACCATCTTCAAAAGTTGACCATACAAAGGCATTCAAGTTAGCTTTTTTCACTATGGATGATCTTTATGTAGGGAACGTAATGACACTGCAATTTCCTATCAGAGAATATGCTAACTTCTTGCCAAAAAAAGTAGCTGACTACATTCCTTTCTCCAAGTCGCAACTACCAAGCCTTCTTCAACTATTCTCTCTCACAAACGATTCTCCCCAAGGTGAAGACATGAAAGACATAATTGATCAATGTGAATTTGAACCCACAAAAGGGGAGACCAAAGCTTGTCCTACTTCATTAGAGTCCATGCTTGAATTTGTTCATAGTGTTCTTGGTACTGAGACCAAATATAACATTCACACAACTAGCTATCCCACAACATCAGGTGCACGTTTGCAGAACTACACCATTTTGGAAATCTCAAAGGATATCTATGCTCCTAAATGGGTAGCTTGTCACCCTAGGCCTTACCCTTATGCTCTTTACTACTGCCACTACCTAGACATAGGGAGTAAGGTCTTCAAAGTTCTTCTAAGGGGTCAATATGGAGACATAATGGATGCTTTGGGCATTTGCCACCTAGACACGTCTGACATGAATCCTAATCATTTTATATTTCAACTACTTGGAATGAAGCCTGGGGAAGCTCCTATGTGCCATTTCTTCCCTGTAAAGCACGTTCTATGGGCACCACTCCCACCAGAGGCCACCAACTGA
Protein sequence

>MS.gene063172.t1

MKLQHENVEEKQVDQPYLDGWLKNSPLKNKKLNSNPSYLDGWLKDAPEENKKAIHNTNQVYLDGWLKDTKNQKEKTTHDSNQVYLDGWLKDTQVQKTKSTPNSNQVYLDGWLKDTQVEKAKFIPNSNQVYLDGWLKDSQDEKAKSTPNSNQVYLDGWLKDSHAEKEKSNPNYNQVYLDGWLKDTKDQKEKTIHNLNQAYLDGWLKDSRVERAKPTHNSNRVYLDGWLKDSHVEKEKSTPNSNQVYLDGWLKDAQLEKAKSTPNFNQVYLDGWLKDSQVEQGKSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEKARSTPNSNQVYLDGWLKDSQVEKARSTPNSNQVYLDGWLKDGQVEQVKSTPNSNQVYLDGWLKDTKDQMEKPIHNLNQAYLDGWLKDSHAANSMKKIGQDMAESKGKPSSKVDHTKAFKLAFFTMDDLYVGNVMTLQFPIREYANFLPKKVADYIPFSKSQLPSLLQLFSLTNDSPQGEDMKDIIDQCEFEPTKGETKACPTSLESMLEFVHSVLGTETKYNIHTTSYPTTSGARLQNYTILEISKDIYAPKWVACHPRPYPYALYYCHYLDIGSKVFKVLLRGQYGDIMDALGICHLDTSDMNPNHFIFQLLGMKPGEAPMCHFFPVKHVLWAPLPPEATN