Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064886.t1 | RHN71273.1 | 96.8 | 253 | 8 | 0 | 443 | 695 | 293 | 545 | 3.80E-143 | 518.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064886.t1 | D2CZZ9 | 39.1 | 220 | 126 | 3 | 475 | 686 | 59 | 278 | 7.9e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064886.t1 | A0A396J3N7 | 96.8 | 253 | 8 | 0 | 443 | 695 | 293 | 545 | 2.7e-143 | 518.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene064886 | 0.847555 | 1.07E-59 | -1.69E-46 |
| MS.gene049173 | MS.gene064886 | 0.835307 | 1.81E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene064886 | 0.821824 | 3.29E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene064886 | 0.857691 | 1.37E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene064886 | 0.822121 | 2.81E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene064886 | 0.872495 | 3.04E-67 | -1.69E-46 |
| MS.gene049320 | MS.gene064886 | 0.853278 | 2.66E-61 | -1.69E-46 |
| MS.gene04939 | MS.gene064886 | 0.824111 | 9.63E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene064886 | 0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene064886 | 0.854092 | 1.55E-61 | -1.69E-46 |
| MS.gene05010 | MS.gene064886 | 0.811735 | 6.03E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene064886 | 0.846846 | 1.68E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene064886 | 0.851524 | 8.39E-61 | -1.69E-46 |
| MS.gene050170 | MS.gene064886 | 0.819305 | 1.25E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene064886 | 0.848509 | 5.86E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene064886 | 0.855695 | 5.31E-62 | -1.69E-46 |
| MS.gene050403 | MS.gene064886 | 0.808576 | 2.89E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene064886 | 0.867776 | 1.07E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene064886 | 0.81569 | 8.12E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene064886 | 0.860892 | 1.50E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene064886 | 0.850861 | 1.29E-60 | -1.69E-46 |
| MS.gene050577 | MS.gene064886 | 0.835534 | 1.59E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene064886 | 0.871318 | 7.49E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene064886 | 0.855288 | 6.97E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene064886 | 0.837475 | 5.09E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene064886 | 0.827133 | 1.85E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene064886 | 0.829368 | 5.35E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene064886 | 0.869187 | 3.74E-66 | -1.69E-46 |
| MS.gene050868 | MS.gene064886 | 0.844408 | 7.70E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene064886 | 0.84248 | 2.52E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene064886 | 0.826398 | 2.77E-54 | -1.69E-46 |
| MS.gene050904 | MS.gene064886 | 0.847294 | 1.27E-59 | -1.69E-46 |
| MS.gene050950 | MS.gene064886 | 0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene064886 | 0.864472 | 1.19E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene064886 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene064886 | 0.835313 | 1.80E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene064886 | 0.851954 | 6.34E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene064886 | 0.863696 | 2.07E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene064886 | 0.815298 | 9.93E-52 | -1.69E-46 |
| MS.gene051617 | MS.gene064886 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene064886 | 0.826576 | 2.51E-54 | -1.69E-46 |
| MS.gene051838 | MS.gene064886 | 0.821483 | 3.94E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene064886 | 0.848052 | 7.83E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene064886 | 0.836124 | 1.12E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene064886 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene064886 | 0.811476 | 6.87E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene064886 | 0.815442 | 9.23E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene064886 | 0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene064886 | 0.810203 | 1.30E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene064886 | 0.801622 | 8.25E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene064886 | 0.851911 | 6.52E-61 | -1.69E-46 |
| MS.gene052872 | MS.gene064886 | 0.856529 | 3.02E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene064886 | 0.834704 | 2.57E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene064886 | 0.82049 | 6.67E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene064886 | 0.812303 | 4.54E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene064886 | 0.81619 | 6.28E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene064886 | 0.822853 | 1.90E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene064886 | 0.826398 | 2.77E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene064886 | 0.838535 | 2.71E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene064886 | 0.817608 | 3.02E-52 | -1.69E-46 |
| MS.gene053626 | MS.gene064886 | 0.804847 | 1.77E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene064886 | 0.855748 | 5.12E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene064886 | 0.829336 | 5.45E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene064886 | 0.853033 | 3.12E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene064886 | 0.840457 | 8.59E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene064886 | 0.859819 | 3.18E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene064886 | 0.844238 | 8.56E-59 | -1.69E-46 |
| MS.gene05470 | MS.gene064886 | 0.840173 | 1.02E-57 | -1.69E-46 |
| MS.gene05494 | MS.gene064886 | 0.825774 | 3.90E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene064886 | 0.868143 | 8.13E-66 | -1.69E-46 |
| MS.gene055206 | MS.gene064886 | 0.801579 | 8.42E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene064886 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene064886 | 0.810638 | 1.04E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene064886 | 0.842121 | 3.14E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene064886 | 0.846836 | 1.69E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene064886 | 0.826681 | 2.37E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene064886 | 0.810065 | 1.39E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene064886 | 0.901216 | 3.35E-78 | -1.69E-46 |
| MS.gene055750 | MS.gene064886 | 0.866238 | 3.30E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene064886 | 0.897902 | 8.95E-77 | -1.69E-46 |
| MS.gene055776 | MS.gene064886 | 0.85457 | 1.13E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene064886 | 0.860159 | 2.51E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene064886 | 0.827454 | 1.55E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene064886 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene064886 | 0.834194 | 3.45E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene064886 | 0.821353 | 4.22E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene064886 | 0.866496 | 2.73E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene064886 | 0.860588 | 1.86E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene064886 | 0.866458 | 2.81E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene064886 | 0.864255 | 1.39E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene064886 | 0.817526 | 3.15E-52 | -1.69E-46 |
| MS.gene056898 | MS.gene064886 | 0.815777 | 7.77E-52 | -1.69E-46 |
| MS.gene056903 | MS.gene064886 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene064886 | 0.823218 | 1.56E-53 | -1.69E-46 |
| MS.gene05753 | MS.gene064886 | 0.816452 | 5.49E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene064886 | 0.829127 | 6.12E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene064886 | 0.848987 | 4.32E-60 | -1.69E-46 |
| MS.gene05787 | MS.gene064886 | 0.832476 | 9.25E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene064886 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene058335 | MS.gene064886 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene064886 | 0.815274 | 1.01E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene064886 | 0.802009 | 6.88E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene064886 | 0.851862 | 6.73E-61 | -1.69E-46 |
| MS.gene058544 | MS.gene064886 | 0.825738 | 3.98E-54 | -1.69E-46 |
| MS.gene058719 | MS.gene064886 | 0.814943 | 1.19E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene064886 | 0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene064886 | 0.871342 | 7.35E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene064886 | 0.819222 | 1.30E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene064886 | 0.844111 | 9.25E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene064886 | 0.855509 | 6.01E-62 | -1.69E-46 |
| MS.gene059079 | MS.gene064886 | 0.810581 | 1.07E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene064886 | 0.828156 | 1.05E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene064886 | 0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene064886 | 0.830126 | 3.50E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene064886 | 0.86439 | 1.26E-64 | -1.69E-46 |
| MS.gene059718 | MS.gene064886 | 0.853855 | 1.81E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene064886 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene064886 | 0.849882 | 2.43E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene064886 | 0.828383 | 9.27E-55 | -1.69E-46 |
| MS.gene060295 | MS.gene064886 | 0.803512 | 3.36E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene064886 | 0.823128 | 1.64E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene064886 | 0.858965 | 5.73E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene064886 | 0.830528 | 2.79E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene064886 | 0.824646 | 7.21E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene064886 | 0.804096 | 2.54E-49 | -1.69E-46 |
| MS.gene06097 | MS.gene064886 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene060981 | MS.gene064886 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene064886 | 0.849945 | 2.33E-60 | -1.69E-46 |
| MS.gene06111 | MS.gene064886 | 0.836689 | 8.08E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene064886 | 0.839913 | 1.19E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064886.t1 | MTR_3g116320 | 93.525 | 695 | 44 | 1 | 1 | 695 | 1 | 694 | 0.0 | 1328 |
| MS.gene064886.t1 | MTR_3g116270 | 75.560 | 491 | 118 | 2 | 206 | 695 | 23 | 512 | 0.0 | 768 |
| MS.gene064886.t1 | MTR_3g116270 | 66.038 | 265 | 88 | 1 | 1 | 263 | 1 | 265 | 3.32e-114 | 353 |
| MS.gene064886.t1 | MTR_3g116270 | 63.801 | 221 | 80 | 0 | 154 | 374 | 41 | 261 | 5.72e-89 | 288 |
| MS.gene064886.t1 | MTR_3g116270 | 58.996 | 239 | 97 | 1 | 114 | 351 | 23 | 261 | 7.51e-85 | 277 |
| MS.gene064886.t1 | MTR_3g116270 | 57.322 | 239 | 101 | 1 | 91 | 328 | 23 | 261 | 5.25e-81 | 266 |
| MS.gene064886.t1 | MTR_3g116270 | 59.649 | 114 | 40 | 2 | 41 | 150 | 156 | 267 | 1.15e-31 | 130 |
| MS.gene064886.t1 | MTR_4g069520 | 33.510 | 755 | 394 | 33 | 1 | 691 | 1 | 711 | 4.83e-96 | 312 |
| MS.gene064886.t1 | MTR_4g069520 | 33.555 | 751 | 391 | 33 | 5 | 691 | 19 | 725 | 2.17e-94 | 308 |
| MS.gene064886.t1 | MTR_4g069570 | 50.530 | 283 | 114 | 5 | 433 | 689 | 54 | 336 | 2.88e-94 | 295 |
| MS.gene064886.t1 | MTR_4g069040 | 56.444 | 225 | 96 | 2 | 466 | 688 | 285 | 509 | 1.67e-92 | 297 |
| MS.gene064886.t1 | MTR_4g069550 | 57.203 | 236 | 99 | 2 | 458 | 691 | 230 | 465 | 1.23e-90 | 291 |
| MS.gene064886.t1 | MTR_6g086530 | 57.073 | 205 | 85 | 3 | 487 | 688 | 1 | 205 | 4.47e-70 | 227 |
| MS.gene064886.t1 | MTR_3g116410 | 47.489 | 219 | 112 | 1 | 473 | 688 | 57 | 275 | 7.91e-69 | 227 |
| MS.gene064886.t1 | MTR_4g069680 | 46.575 | 219 | 114 | 1 | 473 | 688 | 68 | 286 | 8.53e-66 | 219 |
| MS.gene064886.t1 | MTR_3g107830 | 46.119 | 219 | 115 | 1 | 473 | 688 | 37 | 255 | 1.08e-65 | 218 |
| MS.gene064886.t1 | MTR_3g116380 | 42.466 | 219 | 122 | 2 | 474 | 689 | 86 | 303 | 4.97e-60 | 204 |
| MS.gene064886.t1 | MTR_1g008500 | 41.284 | 218 | 118 | 5 | 475 | 687 | 171 | 383 | 1.16e-45 | 167 |
| MS.gene064886.t1 | MTR_1g008470 | 39.720 | 214 | 122 | 4 | 475 | 686 | 89 | 297 | 8.22e-44 | 160 |
| MS.gene064886.t1 | MTR_1g008510 | 39.535 | 215 | 123 | 4 | 475 | 687 | 115 | 324 | 3.35e-43 | 159 |
| MS.gene064886.t1 | MTR_1g008530 | 39.437 | 213 | 120 | 5 | 480 | 687 | 14 | 222 | 1.31e-42 | 154 |
| MS.gene064886.t1 | MTR_4g068420 | 53.191 | 141 | 45 | 3 | 553 | 691 | 2 | 123 | 1.72e-42 | 150 |
| MS.gene064886.t1 | MTR_1g008590 | 39.070 | 215 | 123 | 4 | 475 | 686 | 113 | 322 | 1.89e-42 | 157 |
| MS.gene064886.t1 | MTR_0312s0030 | 39.070 | 215 | 123 | 4 | 475 | 686 | 113 | 322 | 2.65e-42 | 156 |
| MS.gene064886.t1 | MTR_1g007520 | 39.070 | 215 | 123 | 4 | 475 | 686 | 113 | 322 | 2.65e-42 | 156 |
| MS.gene064886.t1 | MTR_3g109490 | 40.183 | 219 | 122 | 6 | 475 | 688 | 107 | 321 | 7.98e-41 | 152 |
| MS.gene064886.t1 | MTR_1g008560 | 38.356 | 219 | 124 | 5 | 475 | 687 | 115 | 328 | 8.33e-41 | 152 |
| MS.gene064886.t1 | MTR_1g008460 | 38.208 | 212 | 125 | 3 | 475 | 686 | 89 | 294 | 3.78e-40 | 149 |
| MS.gene064886.t1 | MTR_1g008450 | 38.710 | 217 | 125 | 4 | 473 | 686 | 99 | 310 | 4.26e-38 | 144 |
| MS.gene064886.t1 | MTR_1g008580 | 37.714 | 175 | 102 | 4 | 515 | 687 | 1 | 170 | 1.05e-33 | 127 |
| MS.gene064886.t1 | MTR_5g034320 | 33.178 | 214 | 121 | 8 | 475 | 677 | 415 | 617 | 5.60e-25 | 110 |
| MS.gene064886.t1 | MTR_8g064500 | 32.432 | 222 | 112 | 7 | 475 | 677 | 159 | 361 | 2.83e-24 | 105 |
| MS.gene064886.t1 | MTR_8g064560 | 32.301 | 226 | 125 | 7 | 475 | 686 | 412 | 623 | 3.74e-24 | 108 |
| MS.gene064886.t1 | MTR_3g078090 | 32.579 | 221 | 113 | 7 | 475 | 677 | 413 | 615 | 1.01e-23 | 106 |
| MS.gene064886.t1 | MTR_8g064530 | 31.532 | 222 | 134 | 6 | 475 | 687 | 429 | 641 | 1.12e-23 | 106 |
| MS.gene064886.t1 | MTR_4g069540 | 57.333 | 75 | 32 | 0 | 461 | 535 | 20 | 94 | 9.78e-23 | 94.0 |
| MS.gene064886.t1 | MTR_4g133840 | 32.642 | 193 | 108 | 6 | 498 | 687 | 14 | 187 | 1.46e-21 | 93.2 |
| MS.gene064886.t1 | MTR_8g046000 | 32.110 | 218 | 122 | 7 | 475 | 690 | 31 | 224 | 1.87e-21 | 94.4 |
| MS.gene064886.t1 | MTR_5g033350 | 28.497 | 193 | 121 | 5 | 501 | 686 | 16 | 198 | 1.76e-19 | 87.8 |
| MS.gene064886.t1 | MTR_8g445140 | 36.478 | 159 | 89 | 6 | 531 | 688 | 155 | 302 | 4.21e-19 | 89.0 |
| MS.gene064886.t1 | MTR_5g033340 | 29.204 | 226 | 138 | 8 | 472 | 686 | 163 | 377 | 1.61e-18 | 88.6 |
| MS.gene064886.t1 | MTR_5g033340 | 30.000 | 160 | 95 | 5 | 518 | 670 | 4 | 153 | 6.33e-15 | 77.8 |
| MS.gene064886.t1 | MTR_8g445170 | 34.177 | 158 | 92 | 5 | 532 | 688 | 237 | 383 | 6.00e-18 | 87.0 |
| MS.gene064886.t1 | MTR_5g033330 | 29.439 | 214 | 129 | 8 | 475 | 677 | 405 | 607 | 1.22e-17 | 87.4 |
| MS.gene064886.t1 | MTR_5g033330 | 29.469 | 207 | 124 | 8 | 475 | 670 | 197 | 392 | 1.91e-15 | 80.5 |
| MS.gene064886.t1 | MTR_5g033330 | 28.249 | 177 | 110 | 5 | 501 | 670 | 18 | 184 | 7.61e-15 | 78.6 |
| MS.gene064886.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 539 | 688 | 292 | 431 | 2.08e-17 | 85.9 |
| MS.gene064886.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 539 | 688 | 333 | 472 | 3.85e-17 | 85.5 |
| MS.gene064886.t1 | MTR_8g045890 | 34.667 | 150 | 88 | 5 | 539 | 688 | 370 | 509 | 4.68e-17 | 85.1 |
| MS.gene064886.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 548 | 688 | 184 | 314 | 9.47e-15 | 76.3 |
| MS.gene064886.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 548 | 688 | 221 | 351 | 1.24e-14 | 76.6 |
| MS.gene064886.t1 | MTR_8g045880 | 33.333 | 141 | 84 | 4 | 548 | 688 | 219 | 349 | 1.53e-14 | 76.3 |
| MS.gene064886.t1 | MTR_1g045860 | 32.000 | 150 | 93 | 4 | 539 | 688 | 119 | 259 | 1.01e-13 | 72.4 |
| MS.gene064886.t1 | MTR_2g081770 | 28.099 | 242 | 135 | 10 | 460 | 688 | 55 | 270 | 1.15e-13 | 72.4 |
| MS.gene064886.t1 | MTR_8g075930 | 38.667 | 75 | 43 | 2 | 605 | 677 | 14 | 87 | 5.14e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064886.t1 | AT1G49320 | 33.942 | 274 | 165 | 6 | 426 | 687 | 9 | 278 | 2.33e-44 | 160 |
| MS.gene064886.t1 | AT5G25610 | 38.073 | 218 | 125 | 6 | 475 | 686 | 176 | 389 | 5.44e-39 | 149 |
| MS.gene064886.t1 | AT1G70370 | 32.727 | 220 | 134 | 6 | 475 | 687 | 411 | 623 | 5.43e-25 | 110 |
| MS.gene064886.t1 | AT1G70370 | 32.727 | 220 | 134 | 6 | 475 | 687 | 411 | 623 | 5.43e-25 | 110 |
| MS.gene064886.t1 | AT1G23760 | 32.812 | 192 | 123 | 4 | 498 | 687 | 432 | 619 | 6.95e-24 | 107 |
| MS.gene064886.t1 | AT1G60390 | 29.798 | 198 | 117 | 5 | 499 | 686 | 435 | 620 | 4.48e-21 | 98.6 |
Find 196 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCAAGTTTATCTTGA+TGG | 0.211968 | 3.3:-94783293 | MS.gene064886:CDS |
| AGGATATCTATGCTCCTAAA+TGG | 0.228868 | 3.3:-94782368 | MS.gene064886:CDS |
| GAATTTGTTCATAGTGTTCT+TGG | 0.231624 | 3.3:-94782480 | MS.gene064886:CDS |
| TTTGCAGAACTACACCATTT+TGG | 0.234201 | 3.3:-94782400 | MS.gene064886:CDS |
| TCCCTGTAAAGCACGTTCTA+TGG | 0.238519 | 3.3:-94782128 | MS.gene064886:CDS |
| GTCTTTCATGTCTTCACCTT+GGG | 0.240047 | 3.3:+94782578 | None:intergenic |
| TCCAATCAAGTTTATCTTGA+TGG | 0.240985 | 3.3:-94783086 | MS.gene064886:CDS |
| GATAAACTTGATTGAAGTTT+GGG | 0.247881 | 3.3:+94783300 | None:intergenic |
| AGGTCTTCAAAGTTCTTCTA+AGG | 0.253474 | 3.3:-94782278 | MS.gene064886:CDS |
| ATCCTTTGAGATTTCCAAAA+TGG | 0.256902 | 3.3:+94782386 | None:intergenic |
| GATAAACTTGATTGGAGTTT+GGG | 0.256939 | 3.3:+94783093 | None:intergenic |
| TCTAATCAAGTTTATCTTGA+TGG | 0.268313 | 3.3:-94783017 | MS.gene064886:CDS |
| GATAAACTTGATTAGAGTTT+GGG | 0.274295 | 3.3:+94783024 | None:intergenic |
| GATAAACTTGGTTGGAGTTT+GGG | 0.274888 | 3.3:+94783162 | None:intergenic |
| GATAAACTTGGTTGGAGTTT+GGG | 0.274888 | 3.3:+94783645 | None:intergenic |
| TCCAATCGAGTTTATCTTGA+TGG | 0.276513 | 3.3:-94783431 | MS.gene064886:CDS |
| GGGTGACAAGCTACCCATTT+AGG | 0.279438 | 3.3:+94782354 | None:intergenic |
| TCCAACCAAGTTTATCTTGA+TGG | 0.283723 | 3.3:-94783155 | MS.gene064886:CDS |
| TCCAATCAAGTTTACCTTGA+TGG | 0.284115 | 3.3:-94782948 | MS.gene064886:CDS |
| TCCAATCAAGTTTACCTTGA+TGG | 0.284115 | 3.3:-94783224 | MS.gene064886:CDS |
| GCGAACTCCATGAAGAAAAT+TGG | 0.289076 | 3.3:-94782834 | MS.gene064886:CDS |
| GCCCATAGAACGTGCTTTAC+AGG | 0.291191 | 3.3:+94782126 | None:intergenic |
| TACAATCAAGTTTACCTTGA+TGG | 0.294768 | 3.3:-94783569 | MS.gene064886:CDS |
| TCTAATCAAGTTTACCTTGA+TGG | 0.295765 | 3.3:-94783707 | MS.gene064886:CDS |
| AGATAAACTTGATTGAAGTT+TGG | 0.296038 | 3.3:+94783299 | None:intergenic |
| TCCAATCAAGTTTACCTTGA+TGG | 0.298027 | 3.3:-94783362 | MS.gene064886:CDS |
| AGATAAACTTGGTTGGAGTT+TGG | 0.299383 | 3.3:+94783161 | None:intergenic |
| CTCAATCAGGCTTACCTTGA+TGG | 0.299708 | 3.3:-94782879 | MS.gene064886:CDS |
| AGATAAACTTGATTGGAGTT+TGG | 0.300825 | 3.3:+94783092 | None:intergenic |
| GTTGATCAGCCTTACCTTGA+TGG | 0.301941 | 3.3:-94784046 | MS.gene064886:CDS |
| AGATAAACTTGATTAGAGTT+TGG | 0.304429 | 3.3:+94783023 | None:intergenic |
| AGATAAACTTGGTTGGAGTT+TGG | 0.312080 | 3.3:+94783644 | None:intergenic |
| AGTTGTGTGAATGTTATATT+TGG | 0.312223 | 3.3:+94782449 | None:intergenic |
| TTACCTAGATGGATGGTTAA+AGG | 0.317562 | 3.3:-94783834 | MS.gene064886:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.321370 | 3.3:+94782954 | None:intergenic |
| AGGTAAACTTGATTGGAGTT+AGG | 0.321370 | 3.3:+94783368 | None:intergenic |
| AGGTAAACTTGATTGTAGTT+AGG | 0.321428 | 3.3:+94783575 | None:intergenic |
| AGGTAAACTTGATTAGAGTT+AGG | 0.324677 | 3.3:+94783713 | None:intergenic |
| TGGAGACATAATGGATGCTT+TGG | 0.329852 | 3.3:-94782247 | MS.gene064886:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.334772 | 3.3:+94783782 | None:intergenic |
| CTCAATCAGGCTTACCTTGA+TGG | 0.351388 | 3.3:-94783500 | MS.gene064886:CDS |
| TCTAATCCAAGTTATCTTGA+TGG | 0.360948 | 3.3:-94783983 | MS.gene064886:CDS |
| AGTTGAAATATAAAATGATT+AGG | 0.362732 | 3.3:+94782192 | None:intergenic |
| GGTAAACTTGATTGTAGTTA+GGG | 0.371166 | 3.3:+94783576 | None:intergenic |
| TCCAATCAAGTTTACCTAGA+TGG | 0.372314 | 3.3:-94783845 | MS.gene064886:CDS |
| TTGGTTCAGTTGGTGGCCTC+TGG | 0.375839 | 3.3:+94782093 | None:intergenic |
| GTTCTTCTAAGGGGTCAATA+TGG | 0.383693 | 3.3:-94782267 | MS.gene064886:CDS |
| TCGATCTTGCTTTCTCAACT+TGG | 0.386255 | 3.3:+94783117 | None:intergenic |
| ACCAATCAAGTTTACCTAGA+TGG | 0.387215 | 3.3:-94783914 | MS.gene064886:CDS |
| AGGTAAACTTGATTGGAGTT+AGG | 0.390322 | 3.3:+94783230 | None:intergenic |
| TGGCAGTAGTAAAGAGCATA+AGG | 0.391483 | 3.3:+94782321 | None:intergenic |
| CTAGTTCCCTTTGGTTCAGT+TGG | 0.397858 | 3.3:+94782083 | None:intergenic |
| TTGATCTTGCCTTCTCAACT+TGG | 0.398535 | 3.3:+94783186 | None:intergenic |
| ACTATGGATGATCTTTATGT+AGG | 0.401691 | 3.3:-94782735 | MS.gene064886:CDS |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.3:+94782955 | None:intergenic |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.3:+94783369 | None:intergenic |
| GGTAAACTTGATTGGAGTTA+GGG | 0.403936 | 3.3:+94783783 | None:intergenic |
| TCGATCTTGCTTTCTCAACT+TGG | 0.408406 | 3.3:+94783048 | None:intergenic |
| GAGAATAGTTGAAGAAGGCT+TGG | 0.410178 | 3.3:+94782618 | None:intergenic |
| TCCAATCAAGTTTACCTTGA+CGG | 0.412584 | 3.3:-94783776 | MS.gene064886:CDS |
| GTTCCCTTTGGTTCAGTTGG+TGG | 0.415275 | 3.3:+94782086 | None:intergenic |
| TGAGAGAGAATAGTTGAAGA+AGG | 0.421944 | 3.3:+94782613 | None:intergenic |
| GGTAAACTTGATTAGAGTTA+GGG | 0.423201 | 3.3:+94783714 | None:intergenic |
| AACCATCCATCAAGATAACT+TGG | 0.424143 | 3.3:+94783977 | None:intergenic |
| CGTGCTTTACAGGGAAGAAA+TGG | 0.426994 | 3.3:+94782136 | None:intergenic |
| ATCAGCCTTACCTTGATGGC+TGG | 0.428156 | 3.3:-94784042 | MS.gene064886:CDS |
| TCCATCTAGGTAAACTTGAT+TGG | 0.430236 | 3.3:+94783844 | None:intergenic |
| TTGGTGGCCTCTGGTGGGAG+TGG | 0.432130 | 3.3:+94782102 | None:intergenic |
| CAACTACTTGGAATGAAGCC+TGG | 0.433769 | 3.3:-94782174 | MS.gene064886:CDS |
| TCCATCAAGGTAAACTTGAT+TGG | 0.436782 | 3.3:+94782947 | None:intergenic |
| TCCATCAAGGTAAACTTGAT+TGG | 0.436782 | 3.3:+94783223 | None:intergenic |
| GTTCAGTTGGTGGCCTCTGG+TGG | 0.441778 | 3.3:+94782096 | None:intergenic |
| TATCTTTCAACCATCCATCT+AGG | 0.444354 | 3.3:+94783900 | None:intergenic |
| TGTCTTTCATGTCTTCACCT+TGG | 0.444739 | 3.3:+94782577 | None:intergenic |
| AACTTGATTGTAGTTAGGGT+TGG | 0.447399 | 3.3:+94783580 | None:intergenic |
| GAAAGATACCAAGGATCAAA+TGG | 0.449700 | 3.3:-94782919 | MS.gene064886:CDS |
| GCCATCAAGGTAAACTTGAT+TGG | 0.450457 | 3.3:+94783361 | None:intergenic |
| AACTATCCACAACCTCAATC+AGG | 0.453031 | 3.3:-94783513 | MS.gene064886:CDS |
| AAGTTAGCATATTCTCTGAT+AGG | 0.453535 | 3.3:+94782690 | None:intergenic |
| GTGAATTTGAACCCACAAAA+GGG | 0.456334 | 3.3:-94782542 | MS.gene064886:CDS |
| GGTAAGCCTGATTGAGGTTG+TGG | 0.457575 | 3.3:+94783507 | None:intergenic |
| CAAGACATGGCAGAATCAAA+AGG | 0.457794 | 3.3:-94782810 | MS.gene064886:CDS |
| ACCAATACACAACCTCAATC+AGG | 0.459181 | 3.3:-94782892 | MS.gene064886:CDS |
| TCCGTCAAGGTAAACTTGAT+TGG | 0.460129 | 3.3:+94783775 | None:intergenic |
| TCCATCAAGATAAACTTGAT+TGG | 0.461282 | 3.3:+94783085 | None:intergenic |
| GAAAGACACCAAAGATCAAA+AGG | 0.461407 | 3.3:-94783540 | MS.gene064886:CDS |
| ATCAAGTTTACCTTGATGGC+TGG | 0.461599 | 3.3:-94783565 | MS.gene064886:CDS |
| GGGTCAATATGGAGACATAA+TGG | 0.464907 | 3.3:-94782256 | MS.gene064886:CDS |
| TCCAACCAAGTTTATCTTGA+CGG | 0.468204 | 3.3:-94783638 | MS.gene064886:CDS |
| TGTGAATTTGAACCCACAAA+AGG | 0.468537 | 3.3:-94782543 | MS.gene064886:CDS |
| AGAGCATAAGGGTAAGGCCT+AGG | 0.470306 | 3.3:+94782333 | None:intergenic |
| AACTACTTGGAATGAAGCCT+GGG | 0.472218 | 3.3:-94782173 | MS.gene064886:CDS |
| TCCATCTAGGTAAACTTGAT+TGG | 0.472763 | 3.3:+94783913 | None:intergenic |
| ACTAGCTATCCCACAACATC+AGG | 0.475940 | 3.3:-94782429 | MS.gene064886:CDS |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.3:+94782959 | None:intergenic |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.3:+94783373 | None:intergenic |
| AACTTGATTGGAGTTAGGGG+TGG | 0.478066 | 3.3:+94783787 | None:intergenic |
| CCCTGTAAAGCACGTTCTAT+GGG | 0.478082 | 3.3:-94782127 | MS.gene064886:CDS |
| CTATGGATGATCTTTATGTA+GGG | 0.478680 | 3.3:-94782734 | MS.gene064886:CDS |
| GGTAGTTGCGACTTGGAGAA+AGG | 0.479066 | 3.3:+94782639 | None:intergenic |
| GCCTGATTGAGGTTGTGTAT+TGG | 0.481303 | 3.3:+94782891 | None:intergenic |
| GGAGACATAATGGATGCTTT+GGG | 0.482669 | 3.3:-94782246 | MS.gene064886:CDS |
| CTACCTAGACATAGGGAGTA+AGG | 0.491781 | 3.3:-94782298 | MS.gene064886:CDS |
| ATCAGGCTTACCTTGATGGT+TGG | 0.493059 | 3.3:-94782875 | MS.gene064886:CDS |
| TAATGAAGTAGGACAAGCTT+TGG | 0.493432 | 3.3:+94782515 | None:intergenic |
| TTCAGTTGGTGGCCTCTGGT+GGG | 0.494537 | 3.3:+94782097 | None:intergenic |
| GATAAACTCGATTGGAGTTG+TGG | 0.497172 | 3.3:+94783438 | None:intergenic |
| ATCAAGTTTACCTTGATGGC+TGG | 0.497883 | 3.3:-94783358 | MS.gene064886:CDS |
| TATCCTTTAACCATCCATCT+AGG | 0.498476 | 3.3:+94783831 | None:intergenic |
| GAAAGATACCAAGAATCAAA+AGG | 0.504634 | 3.3:-94783885 | MS.gene064886:CDS |
| ATCAGGCTTACCTTGATGGC+TGG | 0.504911 | 3.3:-94783496 | MS.gene064886:CDS |
| GGATATCTATGCTCCTAAAT+GGG | 0.506971 | 3.3:-94782367 | MS.gene064886:CDS |
| ATCAAGTTTATCTTGATGGA+TGG | 0.507762 | 3.3:-94783013 | MS.gene064886:CDS |
| ATATGACACACAAAGTTGTT+CGG | 0.507960 | 3.3:-94785146 | MS.gene064886:CDS |
| AAGGCTTGGTAGTTGCGACT+TGG | 0.508594 | 3.3:+94782632 | None:intergenic |
| CTAACTTGAATGCCTCTGTA+TGG | 0.508943 | 3.3:+94782766 | None:intergenic |
| ATCAAGTTTATCTTGATGGA+TGG | 0.510245 | 3.3:-94783082 | MS.gene064886:CDS |
| ATCAAGTTTATCTTGATGGA+TGG | 0.510245 | 3.3:-94783289 | MS.gene064886:CDS |
| ATAAACTCGATTGGAGTTGT+GGG | 0.512497 | 3.3:+94783439 | None:intergenic |
| CCAACCAAGTTTATCTTGAC+GGG | 0.512790 | 3.3:-94783637 | MS.gene064886:CDS |
| AACTCACGATCAACAAGAGC+AGG | 0.514406 | 3.3:+94785106 | None:intergenic |
| TGTCTTTCAACCAGCCATCA+AGG | 0.516147 | 3.3:+94783555 | None:intergenic |
| CATCTTTCAGCCAGCCATCA+AGG | 0.517526 | 3.3:+94783348 | None:intergenic |
| ACCATCCATCAAGATAAACT+TGG | 0.519057 | 3.3:+94783150 | None:intergenic |
| TGGCTGGTTAAAAGATAGTC+GGG | 0.523097 | 3.3:-94783480 | MS.gene064886:CDS |
| ATCAAGTTTACCTTGATGGA+TGG | 0.523440 | 3.3:-94783703 | MS.gene064886:CDS |
| ATCGAGTTTATCTTGATGGA+TGG | 0.523903 | 3.3:-94783427 | MS.gene064886:CDS |
| TTAAGCCAGCCATCAAGGTA+AGG | 0.525753 | 3.3:+94784037 | None:intergenic |
| ATCAAGTTTACCTTGATGGA+TGG | 0.525923 | 3.3:-94782944 | MS.gene064886:CDS |
| ACCAAGTTTATCTTGATGGA+TGG | 0.525923 | 3.3:-94783151 | MS.gene064886:CDS |
| ATCAAGTTTACCTTGATGGA+TGG | 0.525923 | 3.3:-94783220 | MS.gene064886:CDS |
| GATTCATGTCAGACGTGTCT+AGG | 0.529464 | 3.3:+94782214 | None:intergenic |
| TATCTCTAGCACAGCTTGCA+TGG | 0.531890 | 3.3:+94784104 | None:intergenic |
| ATGGCTGGTTAAAAGATAGT+CGG | 0.532803 | 3.3:-94783481 | MS.gene064886:CDS |
| TCTTTCATGTCTTCACCTTG+GGG | 0.533710 | 3.3:+94782579 | None:intergenic |
| ATAAACTTGGTTGGAGTTTG+GGG | 0.533931 | 3.3:+94783163 | None:intergenic |
| TAGTAAAGAGCATAAGGGTA+AGG | 0.534900 | 3.3:+94782327 | None:intergenic |
| AACTCGATTGGAGTTGTGGG+TGG | 0.536216 | 3.3:+94783442 | None:intergenic |
| GGTCTTCAAAGTTCTTCTAA+GGG | 0.536641 | 3.3:-94782277 | MS.gene064886:CDS |
| AATGGGTAGCTTGTCACCCT+AGG | 0.538892 | 3.3:-94782350 | MS.gene064886:CDS |
| AACTTGATTGGAGTTAGGAG+TGG | 0.538945 | 3.3:+94783235 | None:intergenic |
| CTTGATGGATGGTTGAAAGA+TGG | 0.539962 | 3.3:-94783002 | MS.gene064886:CDS |
| CTTGATGGATGGTTGAAAGA+TGG | 0.539962 | 3.3:-94783140 | MS.gene064886:CDS |
| ATAAACTTGGTTGGAGTTTG+GGG | 0.540923 | 3.3:+94783646 | None:intergenic |
| GGTAAACTTGATTGGTGTTG+TGG | 0.546018 | 3.3:+94783921 | None:intergenic |
| GAAAGATAGCCAAGTTGAGA+AGG | 0.546728 | 3.3:-94783195 | MS.gene064886:CDS |
| GGCAGTAGTAAAGAGCATAA+GGG | 0.547129 | 3.3:+94782322 | None:intergenic |
| TCCATCAAGATAAACTCGAT+TGG | 0.551426 | 3.3:+94783430 | None:intergenic |
| GAGCATAAGGGTAAGGCCTA+GGG | 0.551678 | 3.3:+94782334 | None:intergenic |
| ATCCAAGTTATCTTGATGGA+TGG | 0.552457 | 3.3:-94783979 | MS.gene064886:CDS |
| GGTAAACTTGATTGGAGTCG+TGG | 0.553661 | 3.3:+94783852 | None:intergenic |
| TATCTTTCAACCATCCATCA+AGG | 0.553950 | 3.3:+94782934 | None:intergenic |
| CAAACGTGCACCTGATGTTG+TGG | 0.555390 | 3.3:+94782419 | None:intergenic |
| CCCATAGAACGTGCTTTACA+GGG | 0.559017 | 3.3:+94782127 | None:intergenic |
| ATCAAGTTTACCTTGACGGA+TGG | 0.560773 | 3.3:-94783772 | MS.gene064886:CDS |
| ATCAAGTTTACCTAGATGGA+TGG | 0.561030 | 3.3:-94783841 | MS.gene064886:CDS |
| ATCAAGTTTACCTAGATGGA+TGG | 0.563100 | 3.3:-94783910 | MS.gene064886:CDS |
| TACTGCCACTACCTAGACAT+AGG | 0.566616 | 3.3:-94782306 | MS.gene064886:CDS |
| AAGACATGGCAGAATCAAAA+GGG | 0.567319 | 3.3:-94782809 | MS.gene064886:CDS |
| ACCACCCGTCAAGATAAACT+TGG | 0.569100 | 3.3:+94783633 | None:intergenic |
| TCCATCAAGATAAACTTGGT+TGG | 0.570341 | 3.3:+94783154 | None:intergenic |
| TACTCCCTATGTCTAGGTAG+TGG | 0.570771 | 3.3:+94782301 | None:intergenic |
| ATCAACAAGAGCAGGACAAG+AGG | 0.573982 | 3.3:+94785114 | None:intergenic |
| ACTGCCACTACCTAGACATA+GGG | 0.575542 | 3.3:-94782305 | MS.gene064886:CDS |
| GTAAACTTGATTGGAGTCGT+GGG | 0.579561 | 3.3:+94783853 | None:intergenic |
| ACTCGATTGGAGTTGTGGGT+GGG | 0.582962 | 3.3:+94783443 | None:intergenic |
| AGACCTTACTCCCTATGTCT+AGG | 0.584376 | 3.3:+94782295 | None:intergenic |
| CATCAAGGTAAGCCTGATTG+AGG | 0.584619 | 3.3:+94782880 | None:intergenic |
| CATCAAGGTAAGCCTGATTG+AGG | 0.584619 | 3.3:+94783501 | None:intergenic |
| AGTCTTTCAACCAACCATCA+AGG | 0.584877 | 3.3:+94782865 | None:intergenic |
| CTCACAAACGATTCTCCCCA+AGG | 0.585857 | 3.3:-94782594 | MS.gene064886:CDS |
| TATCTTTCAACCATCCATCA+AGG | 0.588448 | 3.3:+94783210 | None:intergenic |
| TATCTTTCAACCATCCATCA+AGG | 0.588448 | 3.3:+94783693 | None:intergenic |
| AGCATGGACTCTAATGAAGT+AGG | 0.591847 | 3.3:+94782504 | None:intergenic |
| CCCGTCAAGATAAACTTGGT+TGG | 0.599307 | 3.3:+94783637 | None:intergenic |
| ACAAGAGCAGGACAAGAGGA+AGG | 0.603034 | 3.3:+94785118 | None:intergenic |
| AAACGTGCACCTGATGTTGT+GGG | 0.607189 | 3.3:+94782420 | None:intergenic |
| ACTATGAACAAATTCAAGCA+TGG | 0.607524 | 3.3:+94782488 | None:intergenic |
| AAAGATAGCCAAGTTGAGCA+AGG | 0.607835 | 3.3:-94783263 | MS.gene064886:CDS |
| GTCTTCAAAGTTCTTCTAAG+GGG | 0.613953 | 3.3:-94782276 | MS.gene064886:CDS |
| ATAAACTTGATTAGAGTTTG+GGG | 0.616239 | 3.3:+94783025 | None:intergenic |
| ATAAACTTGATTGGAGTTTG+GGG | 0.619713 | 3.3:+94783094 | None:intergenic |
| ACAGGGAAGAAATGGCACAT+AGG | 0.619730 | 3.3:+94782144 | None:intergenic |
| TGGCACATAGGAGCTTCCCC+AGG | 0.628176 | 3.3:+94782156 | None:intergenic |
| ATGGGCACCACTCCCACCAG+AGG | 0.630918 | 3.3:-94782109 | MS.gene064886:CDS |
| TGAATTTGAACCCACAAAAG+GGG | 0.632371 | 3.3:-94782541 | MS.gene064886:CDS |
| ATAAACTTGATTGAAGTTTG+GGG | 0.634939 | 3.3:+94783301 | None:intergenic |
| ACCAAGTTTATCTTGACGGG+TGG | 0.636426 | 3.3:-94783634 | MS.gene064886:CDS |
| GAAGAAAATTGGACAAGACA+TGG | 0.638239 | 3.3:-94782823 | MS.gene064886:CDS |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.3:+94782956 | None:intergenic |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.3:+94783370 | None:intergenic |
| GTAAACTTGATTGGAGTTAG+GGG | 0.649022 | 3.3:+94783784 | None:intergenic |
| TCATGTCAGACGTGTCTAGG+TGG | 0.678767 | 3.3:+94782217 | None:intergenic |
| TGGATGGTTGAAAGATACCA+AGG | 0.679634 | 3.3:-94782928 | MS.gene064886:CDS |
| TTCAAAAGTTGACCATACAG+AGG | 0.702856 | 3.3:-94782778 | MS.gene064886:CDS |
| ACTACTTGGAATGAAGCCTG+GGG | 0.737264 | 3.3:-94782172 | MS.gene064886:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAGTTATAAAAAATAAATT+TGG | + | chr3.3:94782463-94782482 | None:intergenic | 10.0% |
| !! | AGTTGAAATATAAAATGATT+AGG | + | chr3.3:94785053-94785072 | None:intergenic | 15.0% |
| !!! | GTTTTTCCTAAAATTTATTT+TGG | - | chr3.3:94782752-94782771 | MS.gene064886:CDS | 15.0% |
| !! | ATAAAGGTGAAAATTAATGA+TGG | + | chr3.3:94782229-94782248 | None:intergenic | 20.0% |
| !! | TATTCAATTGCATTATAGAA+TGG | - | chr3.3:94783115-94783134 | MS.gene064886:CDS | 20.0% |
| !! | TCTATAATGCAATTGAATAA+AGG | + | chr3.3:94783114-94783133 | None:intergenic | 20.0% |
| !! | TTTATTATGTATACATCAGA+TGG | + | chr3.3:94782974-94782993 | None:intergenic | 20.0% |
| !!! | ACTTTAAAATGAAAAACTGT+TGG | - | chr3.3:94782724-94782743 | MS.gene064886:CDS | 20.0% |
| !!! | ATAACTTTTTTGTTTTCTTC+GGG | + | chr3.3:94783301-94783320 | None:intergenic | 20.0% |
| !!! | CATTTTATATTTCAACTACT+TGG | - | chr3.3:94785056-94785075 | MS.gene064886:intron | 20.0% |
| !!! | GATAACTTTTTTGTTTTCTT+CGG | + | chr3.3:94783302-94783321 | None:intergenic | 20.0% |
| !!! | TCATGACCAAAATAAATTTT+AGG | + | chr3.3:94782761-94782780 | None:intergenic | 20.0% |
| ! | AATGTGTCTTTAGTTAATAC+CGG | - | chr3.3:94782495-94782514 | MS.gene064886:CDS | 25.0% |
| ! | AGATAAACTTGATTAGAGTT+TGG | + | chr3.3:94784222-94784241 | None:intergenic | 25.0% |
| ! | AGATAAACTTGATTGAAGTT+TGG | + | chr3.3:94783946-94783965 | None:intergenic | 25.0% |
| ! | AGTTGTGTGAATGTTATATT+TGG | + | chr3.3:94784796-94784815 | None:intergenic | 25.0% |
| ! | ATAAACTTGATTAGAGTTTG+GGG | + | chr3.3:94784220-94784239 | None:intergenic | 25.0% |
| ! | ATAAACTTGATTGAAGTTTG+GGG | + | chr3.3:94783944-94783963 | None:intergenic | 25.0% |
| ! | CACATAAAAGTTAAAACACT+TGG | - | chr3.3:94783022-94783041 | MS.gene064886:CDS | 25.0% |
| ! | GATAAACTTGATTAGAGTTT+GGG | + | chr3.3:94784221-94784240 | None:intergenic | 25.0% |
| ! | GATAAACTTGATTGAAGTTT+GGG | + | chr3.3:94783945-94783964 | None:intergenic | 25.0% |
| ! | TACATCAGATGGATATAATT+CGG | + | chr3.3:94782963-94782982 | None:intergenic | 25.0% |
| ! | TCTAATCAAGTTTATCTTGA+TGG | - | chr3.3:94784225-94784244 | MS.gene064886:intron | 25.0% |
| ! | TTCAAAGACTATGTTGATAT+TGG | - | chr3.3:94782595-94782614 | MS.gene064886:CDS | 25.0% |
| ! | TTCAATCAAGTTTATCTTGA+TGG | - | chr3.3:94783949-94783968 | MS.gene064886:CDS | 25.0% |
| !! | GACAACTTATATTCATGTTT+TGG | + | chr3.3:94783079-94783098 | None:intergenic | 25.0% |
| !! | TCAGTTTAAAGTGTTTGTTT+AGG | - | chr3.3:94782661-94782680 | MS.gene064886:CDS | 25.0% |
| !! | TGATTTTTAATGTGAGACAA+TGG | + | chr3.3:94782926-94782945 | None:intergenic | 25.0% |
| !!! | AGTTTTTTCCTTTTGATCTT+TGG | + | chr3.3:94783713-94783732 | None:intergenic | 25.0% |
| !!! | ATTTATTTTGGTCATGAACA+AGG | - | chr3.3:94782764-94782783 | MS.gene064886:CDS | 25.0% |
| !!! | GGATTTTGTTTTTTGAACTT+GGG | + | chr3.3:94783437-94783456 | None:intergenic | 25.0% |
| !!! | TAAACAACTATTTTAGTCAC+TGG | - | chr3.3:94782380-94782399 | MS.gene064886:CDS | 25.0% |
| !!! | TGGATTTTGTTTTTTGAACT+TGG | + | chr3.3:94783438-94783457 | None:intergenic | 25.0% |
| !!! | TTTAGTTTTTTGTTCTTCAG+TGG | + | chr3.3:94783238-94783257 | None:intergenic | 25.0% |
| AAGTTAGCATATTCTCTGAT+AGG | + | chr3.3:94784555-94784574 | None:intergenic | 30.0% | |
| ACATCAGATGGATATAATTC+GGG | + | chr3.3:94782962-94782981 | None:intergenic | 30.0% | |
| ACATGCACAATAGCTAATAA+AGG | + | chr3.3:94782245-94782264 | None:intergenic | 30.0% | |
| ACTATGAACAAATTCAAGCA+TGG | + | chr3.3:94784757-94784776 | None:intergenic | 30.0% | |
| ACTATGGATGATCTTTATGT+AGG | - | chr3.3:94784507-94784526 | MS.gene064886:intron | 30.0% | |
| AGATAAACTTGATTGGAGTT+TGG | + | chr3.3:94784153-94784172 | None:intergenic | 30.0% | |
| AGGTAAACTTGATTAGAGTT+AGG | + | chr3.3:94783532-94783551 | None:intergenic | 30.0% | |
| AGGTAAACTTGATTGTAGTT+AGG | + | chr3.3:94783670-94783689 | None:intergenic | 30.0% | |
| ATAAACTTGATTGGAGTTTG+GGG | + | chr3.3:94784151-94784170 | None:intergenic | 30.0% | |
| ATCAAGTTTATCTTGATGGA+TGG | - | chr3.3:94783953-94783972 | MS.gene064886:CDS | 30.0% | |
| CTATGGATGATCTTTATGTA+GGG | - | chr3.3:94784508-94784527 | MS.gene064886:intron | 30.0% | |
| GAAAGATACCAAGAATCAAA+AGG | - | chr3.3:94783357-94783376 | MS.gene064886:CDS | 30.0% | |
| GATAAACTTGATTGGAGTTT+GGG | + | chr3.3:94784152-94784171 | None:intergenic | 30.0% | |
| GGTAAACTTGATTAGAGTTA+GGG | + | chr3.3:94783531-94783550 | None:intergenic | 30.0% | |
| GGTAAACTTGATTGTAGTTA+GGG | + | chr3.3:94783669-94783688 | None:intergenic | 30.0% | |
| TACAATCAAGTTTACCTTGA+TGG | - | chr3.3:94783673-94783692 | MS.gene064886:CDS | 30.0% | |
| TCCAATCAAGTTTATCTTGA+TGG | - | chr3.3:94784156-94784175 | MS.gene064886:intron | 30.0% | |
| TCCATCAAGATAAACTTGAT+TGG | + | chr3.3:94783953-94783972 | None:intergenic | 30.0% | |
| TCTAATCAAGTTTACCTTGA+TGG | - | chr3.3:94783535-94783554 | MS.gene064886:CDS | 30.0% | |
| TCTAATCCAAGTTATCTTGA+TGG | - | chr3.3:94783259-94783278 | MS.gene064886:CDS | 30.0% | |
| ! | GAATTTGTTCATAGTGTTCT+TGG | - | chr3.3:94784762-94784781 | MS.gene064886:intron | 30.0% |
| ! | GAATTTTGCTTTCTCAACTT+GGG | + | chr3.3:94783506-94783525 | None:intergenic | 30.0% |
| ! | TGAATTTTGCTTTCTCAACT+TGG | + | chr3.3:94783507-94783526 | None:intergenic | 30.0% |
| ! | TGATTTTGCTTTCTCAAGTT+GGG | + | chr3.3:94783920-94783939 | None:intergenic | 30.0% |
| ! | TGGATTTTTCTTTCTCAACA+TGG | + | chr3.3:94783852-94783871 | None:intergenic | 30.0% |
| ! | TTGATTTTGCTTTCTCAAGT+TGG | + | chr3.3:94783921-94783940 | None:intergenic | 30.0% |
| !! | AGTCTTTTCCTTTTGATTCT+TGG | + | chr3.3:94783368-94783387 | None:intergenic | 30.0% |
| !! | ATCCTTTGAGATTTCCAAAA+TGG | + | chr3.3:94784859-94784878 | None:intergenic | 30.0% |
| !!! | ATGTAGTCAGCTACTTTTTT+TGG | + | chr3.3:94784582-94784601 | None:intergenic | 30.0% |
| !!! | CAAGTTAGCTTTTTTCACTA+TGG | - | chr3.3:94784491-94784510 | MS.gene064886:intron | 30.0% |
| AACCATCCATCAAGATAACT+TGG | + | chr3.3:94783268-94783287 | None:intergenic | 35.0% | |
| AACTTGATTGTAGTTAGGGT+TGG | + | chr3.3:94783665-94783684 | None:intergenic | 35.0% | |
| AAGACATGGCAGAATCAAAA+GGG | - | chr3.3:94784433-94784452 | MS.gene064886:intron | 35.0% | |
| ACCAAGTTTATCTTGATGGA+TGG | - | chr3.3:94784091-94784110 | MS.gene064886:CDS | 35.0% | |
| ACCAATCAAGTTTACCTAGA+TGG | - | chr3.3:94783328-94783347 | MS.gene064886:CDS | 35.0% | |
| ACCATCCATCAAGATAAACT+TGG | + | chr3.3:94783819-94783838 | None:intergenic | 35.0% | |
| ACTAATGAGCAACACATTGA+AGG | + | chr3.3:94782522-94782541 | None:intergenic | 35.0% | |
| AGATAAACTTGGTTGGAGTT+TGG | + | chr3.3:94783601-94783620 | None:intergenic | 35.0% | |
| AGGATATCTATGCTCCTAAA+TGG | - | chr3.3:94784874-94784893 | MS.gene064886:intron | 35.0% | |
| AGGTAAACTTGATTGGAGTT+AGG | + | chr3.3:94783463-94783482 | None:intergenic | 35.0% | |
| AGGTCTTCAAAGTTCTTCTA+AGG | - | chr3.3:94784964-94784983 | MS.gene064886:intron | 35.0% | |
| ATAAACTCGATTGGAGTTGT+GGG | + | chr3.3:94783806-94783825 | None:intergenic | 35.0% | |
| ATAAACTTGGTTGGAGTTTG+GGG | + | chr3.3:94783599-94783618 | None:intergenic | 35.0% | |
| ATCAAGTTTACCTAGATGGA+TGG | - | chr3.3:94783332-94783351 | MS.gene064886:CDS | 35.0% | |
| ATCAAGTTTACCTTGATGGA+TGG | - | chr3.3:94783539-94783558 | MS.gene064886:CDS | 35.0% | |
| ATCCAAGTTATCTTGATGGA+TGG | - | chr3.3:94783263-94783282 | MS.gene064886:CDS | 35.0% | |
| ATCGAGTTTATCTTGATGGA+TGG | - | chr3.3:94783815-94783834 | MS.gene064886:CDS | 35.0% | |
| CGATACAAACTCACATCTAA+CGG | + | chr3.3:94782358-94782377 | None:intergenic | 35.0% | |
| CGTTAGATGTGAGTTTGTAT+CGG | - | chr3.3:94782356-94782375 | MS.gene064886:CDS | 35.0% | |
| GAAAGACACCAAAGATCAAA+AGG | - | chr3.3:94783702-94783721 | MS.gene064886:CDS | 35.0% | |
| GAAAGATACCAAGGATCAAA+TGG | - | chr3.3:94784323-94784342 | MS.gene064886:intron | 35.0% | |
| GAAGAAAATTGGACAAGACA+TGG | - | chr3.3:94784419-94784438 | MS.gene064886:intron | 35.0% | |
| GATAAACTTGGTTGGAGTTT+GGG | + | chr3.3:94783600-94783619 | None:intergenic | 35.0% | |
| GGATATCTATGCTCCTAAAT+GGG | - | chr3.3:94784875-94784894 | MS.gene064886:intron | 35.0% | |
| GGTAAACTTGATTGGAGTTA+GGG | + | chr3.3:94783462-94783481 | None:intergenic | 35.0% | |
| GGTCTTCAAAGTTCTTCTAA+GGG | - | chr3.3:94784965-94784984 | MS.gene064886:intron | 35.0% | |
| GTAAACTTGATTGGAGTTAG+GGG | + | chr3.3:94783461-94783480 | None:intergenic | 35.0% | |
| GTCTTCAAAGTTCTTCTAAG+GGG | - | chr3.3:94784966-94784985 | MS.gene064886:intron | 35.0% | |
| GTGAATTTGAACCCACAAAA+GGG | - | chr3.3:94784700-94784719 | MS.gene064886:intron | 35.0% | |
| GTTAGATGTGAGTTTGTATC+GGG | - | chr3.3:94782357-94782376 | MS.gene064886:CDS | 35.0% | |
| TAATGAAGTAGGACAAGCTT+TGG | + | chr3.3:94784730-94784749 | None:intergenic | 35.0% | |
| TATCCTTTAACCATCCATCT+AGG | + | chr3.3:94783414-94783433 | None:intergenic | 35.0% | |
| TATCTTTCAACCATCCATCA+AGG | + | chr3.3:94783552-94783571 | None:intergenic | 35.0% | |
| TATCTTTCAACCATCCATCT+AGG | + | chr3.3:94783345-94783364 | None:intergenic | 35.0% | |
| TCCAACCAAGTTTATCTTGA+CGG | - | chr3.3:94783604-94783623 | MS.gene064886:CDS | 35.0% | |
| TCCAACCAAGTTTATCTTGA+TGG | - | chr3.3:94783604-94783623 | MS.gene064886:CDS | 35.0% | |
| TCCAATCAAGTTTACCTAGA+TGG | - | chr3.3:94783397-94783416 | MS.gene064886:CDS | 35.0% | |
| TCCAATCAAGTTTACCTTGA+CGG | - | chr3.3:94783466-94783485 | MS.gene064886:CDS | 35.0% | |
| TCCAATCAAGTTTACCTTGA+TGG | - | chr3.3:94783466-94783485 | MS.gene064886:CDS | 35.0% | |
| TCCAATCGAGTTTATCTTGA+TGG | - | chr3.3:94783811-94783830 | MS.gene064886:CDS | 35.0% | |
| TCCATCAAGATAAACTCGAT+TGG | + | chr3.3:94783815-94783834 | None:intergenic | 35.0% | |
| TCCATCAAGATAAACTTGGT+TGG | + | chr3.3:94784091-94784110 | None:intergenic | 35.0% | |
| TCCATCAAGGTAAACTTGAT+TGG | + | chr3.3:94783539-94783558 | None:intergenic | 35.0% | |
| TCCATCTAGGTAAACTTGAT+TGG | + | chr3.3:94783332-94783351 | None:intergenic | 35.0% | |
| TCTTCTAGCAAGTAATCTGA+AGG | + | chr3.3:94782554-94782573 | None:intergenic | 35.0% | |
| TGAATTTGAACCCACAAAAG+GGG | - | chr3.3:94784701-94784720 | MS.gene064886:intron | 35.0% | |
| TGAGAGAGAATAGTTGAAGA+AGG | + | chr3.3:94784632-94784651 | None:intergenic | 35.0% | |
| TGTGAATTTGAACCCACAAA+AGG | - | chr3.3:94784699-94784718 | MS.gene064886:intron | 35.0% | |
| TTACCTAGATGGATGGTTAA+AGG | - | chr3.3:94783408-94783427 | MS.gene064886:CDS | 35.0% | |
| TTCAAAAGTTGACCATACAG+AGG | - | chr3.3:94784464-94784483 | MS.gene064886:intron | 35.0% | |
| ! | ATGGCTGGTTAAAAGATAGT+CGG | - | chr3.3:94783761-94783780 | MS.gene064886:CDS | 35.0% |
| ! | GTCTTGTCCAATTTTCTTCA+TGG | + | chr3.3:94784418-94784437 | None:intergenic | 35.0% |
| ! | TAGTAAAGAGCATAAGGGTA+AGG | + | chr3.3:94784918-94784937 | None:intergenic | 35.0% |
| ! | TATCTTTTAACCAGCCATCA+AGG | + | chr3.3:94783759-94783778 | None:intergenic | 35.0% |
| ! | TCGATTTTGCTTTCTCAACT+TGG | + | chr3.3:94783576-94783595 | None:intergenic | 35.0% |
| ! | TGGATTTTACTTGCTCAACT+TGG | + | chr3.3:94784266-94784285 | None:intergenic | 35.0% |
| ! | TGGATTTTTCTTTCTCAGCA+TGG | + | chr3.3:94783645-94783664 | None:intergenic | 35.0% |
| ! | TGGTTTTTCCATTTGATCCT+TGG | + | chr3.3:94784334-94784353 | None:intergenic | 35.0% |
| ! | TTTGCAGAACTACACCATTT+TGG | - | chr3.3:94784842-94784861 | MS.gene064886:intron | 35.0% |
| !! | CACCATTTTGGAAATCTCAA+AGG | - | chr3.3:94784854-94784873 | MS.gene064886:intron | 35.0% |
| !! | GTATGGTCAACTTTTGAAGA+TGG | + | chr3.3:94784462-94784481 | None:intergenic | 35.0% |
| AACTACTTGGAATGAAGCCT+GGG | - | chr3.3:94785069-94785088 | MS.gene064886:intron | 40.0% | |
| AACTATCCACAACCTCAATC+AGG | - | chr3.3:94783729-94783748 | MS.gene064886:CDS | 40.0% | |
| AACTTGATTGGAGTTAGGAG+TGG | + | chr3.3:94784010-94784029 | None:intergenic | 40.0% | |
| ACCAATACACAACCTCAATC+AGG | - | chr3.3:94784350-94784369 | MS.gene064886:intron | 40.0% | |
| AGCATGGACTCTAATGAAGT+AGG | + | chr3.3:94784741-94784760 | None:intergenic | 40.0% | |
| AGTCTTTCAACCAACCATCA+AGG | + | chr3.3:94784380-94784399 | None:intergenic | 40.0% | |
| ATAAACGTGTCTTCACTGTG+CGG | - | chr3.3:94782989-94783008 | MS.gene064886:CDS | 40.0% | |
| ATCAAGTTTACCTTGACGGA+TGG | - | chr3.3:94783470-94783489 | MS.gene064886:CDS | 40.0% | |
| CAAGACATGGCAGAATCAAA+AGG | - | chr3.3:94784432-94784451 | MS.gene064886:intron | 40.0% | |
| CCAACCAAGTTTATCTTGAC+GGG | - | chr3.3:94783605-94783624 | MS.gene064886:CDS | 40.0% | |
| CTAACTTGAATGCCTCTGTA+TGG | + | chr3.3:94784479-94784498 | None:intergenic | 40.0% | |
| GAGAATAGTTGAAGAAGGCT+TGG | + | chr3.3:94784627-94784646 | None:intergenic | 40.0% | |
| GATAAACTCGATTGGAGTTG+TGG | + | chr3.3:94783807-94783826 | None:intergenic | 40.0% | |
| GCCATCAAGGTAAACTTGAT+TGG | + | chr3.3:94783677-94783696 | None:intergenic | 40.0% | |
| GCGAACTCCATGAAGAAAAT+TGG | - | chr3.3:94784408-94784427 | MS.gene064886:intron | 40.0% | |
| GGGTCAATATGGAGACATAA+TGG | - | chr3.3:94784986-94785005 | MS.gene064886:intron | 40.0% | |
| GTAAACTTGATTGGAGTCGT+GGG | + | chr3.3:94783392-94783411 | None:intergenic | 40.0% | |
| GTCTTTCATGTCTTCACCTT+GGG | + | chr3.3:94784667-94784686 | None:intergenic | 40.0% | |
| TCCGTCAAGGTAAACTTGAT+TGG | + | chr3.3:94783470-94783489 | None:intergenic | 40.0% | |
| TCGATCTTGCTTTCTCAACT+TGG | + | chr3.3:94784128-94784147 | None:intergenic | 40.0% | |
| TCTTTCATGTCTTCACCTTG+GGG | + | chr3.3:94784666-94784685 | None:intergenic | 40.0% | |
| TGACTGATGATATCAGTGCA+TGG | + | chr3.3:94782313-94782332 | None:intergenic | 40.0% | |
| TGGATGGTTGAAAGATACCA+AGG | - | chr3.3:94783348-94783367 | MS.gene064886:CDS | 40.0% | |
| TGTCTTTCATGTCTTCACCT+TGG | + | chr3.3:94784668-94784687 | None:intergenic | 40.0% | |
| TTGATCTTGCCTTCTCAACT+TGG | + | chr3.3:94784059-94784078 | None:intergenic | 40.0% | |
| ! | AAAGATAGCCAAGTTGAGCA+AGG | - | chr3.3:94783979-94783998 | MS.gene064886:CDS | 40.0% |
| ! | ATCAAGTTTACCTTGATGGC+TGG | - | chr3.3:94783677-94783696 | MS.gene064886:CDS | 40.0% |
| ! | CTTGATGGATGGTTGAAAGA+TGG | - | chr3.3:94783274-94783293 | MS.gene064886:CDS | 40.0% |
| ! | GAAAGATAGCCAAGTTGAGA+AGG | - | chr3.3:94783564-94783583 | MS.gene064886:CDS | 40.0% |
| ! | GGCAGTAGTAAAGAGCATAA+GGG | + | chr3.3:94784923-94784942 | None:intergenic | 40.0% |
| ! | GTTCTTCTAAGGGGTCAATA+TGG | - | chr3.3:94784975-94784994 | MS.gene064886:intron | 40.0% |
| ! | TATCTTTTAGCCATCCGTCA+AGG | + | chr3.3:94783483-94783502 | None:intergenic | 40.0% |
| ! | TGGATTTTCCTTGCTCAACT+TGG | + | chr3.3:94783990-94784009 | None:intergenic | 40.0% |
| ! | TGGCAGTAGTAAAGAGCATA+AGG | + | chr3.3:94784924-94784943 | None:intergenic | 40.0% |
| ! | TGGCTGGTTAAAAGATAGTC+GGG | - | chr3.3:94783762-94783781 | MS.gene064886:CDS | 40.0% |
| !! | GGAGACATAATGGATGCTTT+GGG | - | chr3.3:94784996-94785015 | MS.gene064886:intron | 40.0% |
| !! | GGTAAACTTGATTGGTGTTG+TGG | + | chr3.3:94783324-94783343 | None:intergenic | 40.0% |
| !! | TGGAGACATAATGGATGCTT+TGG | - | chr3.3:94784995-94785014 | MS.gene064886:intron | 40.0% |
| !! | TGTTTTTAAGCCAGCCATCA+AGG | + | chr3.3:94783213-94783232 | None:intergenic | 40.0% |
| AAACGTGCACCTGATGTTGT+GGG | + | chr3.3:94784825-94784844 | None:intergenic | 45.0% | |
| AACTCACGATCAACAAGAGC+AGG | + | chr3.3:94782139-94782158 | None:intergenic | 45.0% | |
| AACTTGATTGGAGTTAGGGG+TGG | + | chr3.3:94783458-94783477 | None:intergenic | 45.0% | |
| ACAGGGAAGAAATGGCACAT+AGG | + | chr3.3:94785101-94785120 | None:intergenic | 45.0% | |
| ACCAAGTTTATCTTGACGGG+TGG | - | chr3.3:94783608-94783627 | MS.gene064886:CDS | 45.0% | |
| ACCACCCGTCAAGATAAACT+TGG | + | chr3.3:94783612-94783631 | None:intergenic | 45.0% | |
| ACTACTTGGAATGAAGCCTG+GGG | - | chr3.3:94785070-94785089 | MS.gene064886:intron | 45.0% | |
| ACTAGCTATCCCACAACATC+AGG | - | chr3.3:94784813-94784832 | MS.gene064886:intron | 45.0% | |
| ACTGCCACTACCTAGACATA+GGG | - | chr3.3:94784937-94784956 | MS.gene064886:intron | 45.0% | |
| AGACCTTACTCCCTATGTCT+AGG | + | chr3.3:94784950-94784969 | None:intergenic | 45.0% | |
| ATCAACAAGAGCAGGACAAG+AGG | + | chr3.3:94782131-94782150 | None:intergenic | 45.0% | |
| CAACTACTTGGAATGAAGCC+TGG | - | chr3.3:94785068-94785087 | MS.gene064886:intron | 45.0% | |
| CATCAAGGTAAGCCTGATTG+AGG | + | chr3.3:94783744-94783763 | None:intergenic | 45.0% | |
| CCCATAGAACGTGCTTTACA+GGG | + | chr3.3:94785118-94785137 | None:intergenic | 45.0% | |
| CCCGTCAAGATAAACTTGGT+TGG | + | chr3.3:94783608-94783627 | None:intergenic | 45.0% | |
| CCCTGTAAAGCACGTTCTAT+GGG | - | chr3.3:94785115-94785134 | MS.gene064886:CDS | 45.0% | |
| CGTGCTTTACAGGGAAGAAA+TGG | + | chr3.3:94785109-94785128 | None:intergenic | 45.0% | |
| CTACCTAGACATAGGGAGTA+AGG | - | chr3.3:94784944-94784963 | MS.gene064886:intron | 45.0% | |
| CTCAATCAGGCTTACCTTGA+TGG | - | chr3.3:94783742-94783761 | MS.gene064886:CDS | 45.0% | |
| GATTCATGTCAGACGTGTCT+AGG | + | chr3.3:94785031-94785050 | None:intergenic | 45.0% | |
| GCCTGATTGAGGTTGTGTAT+TGG | + | chr3.3:94784354-94784373 | None:intergenic | 45.0% | |
| GGTAAACTTGATTGGAGTCG+TGG | + | chr3.3:94783393-94783412 | None:intergenic | 45.0% | |
| GTTGATCAGCCTTACCTTGA+TGG | - | chr3.3:94783196-94783215 | MS.gene064886:CDS | 45.0% | |
| TACTCCCTATGTCTAGGTAG+TGG | + | chr3.3:94784944-94784963 | None:intergenic | 45.0% | |
| TACTGCCACTACCTAGACAT+AGG | - | chr3.3:94784936-94784955 | MS.gene064886:intron | 45.0% | |
| TATCTCTAGCACAGCTTGCA+TGG | + | chr3.3:94783141-94783160 | None:intergenic | 45.0% | |
| TCCCTGTAAAGCACGTTCTA+TGG | - | chr3.3:94785114-94785133 | MS.gene064886:CDS | 45.0% | |
| TGAGCAACACATTGAAGGAC+CGG | + | chr3.3:94782517-94782536 | None:intergenic | 45.0% | |
| TGTCTTTCAACCAGCCATCA+AGG | + | chr3.3:94783690-94783709 | None:intergenic | 45.0% | |
| TTAAGCCAGCCATCAAGGTA+AGG | + | chr3.3:94783208-94783227 | None:intergenic | 45.0% | |
| ! | ATCAGGCTTACCTTGATGGT+TGG | - | chr3.3:94784367-94784386 | MS.gene064886:intron | 45.0% |
| AACTCGATTGGAGTTGTGGG+TGG | + | chr3.3:94783803-94783822 | None:intergenic | 50.0% | |
| ACAAGAGCAGGACAAGAGGA+AGG | + | chr3.3:94782127-94782146 | None:intergenic | 50.0% | |
| ACTCGATTGGAGTTGTGGGT+GGG | + | chr3.3:94783802-94783821 | None:intergenic | 50.0% | |
| AGAGCATAAGGGTAAGGCCT+AGG | + | chr3.3:94784912-94784931 | None:intergenic | 50.0% | |
| CAAACGTGCACCTGATGTTG+TGG | + | chr3.3:94784826-94784845 | None:intergenic | 50.0% | |
| CATCTTTCAGCCAGCCATCA+AGG | + | chr3.3:94783897-94783916 | None:intergenic | 50.0% | |
| CTCACAAACGATTCTCCCCA+AGG | - | chr3.3:94784648-94784667 | MS.gene064886:intron | 50.0% | |
| GAGCATAAGGGTAAGGCCTA+GGG | + | chr3.3:94784911-94784930 | None:intergenic | 50.0% | |
| GCCCATAGAACGTGCTTTAC+AGG | + | chr3.3:94785119-94785138 | None:intergenic | 50.0% | |
| GGGTGACAAGCTACCCATTT+AGG | + | chr3.3:94784891-94784910 | None:intergenic | 50.0% | |
| GGTAAGCCTGATTGAGGTTG+TGG | + | chr3.3:94783738-94783757 | None:intergenic | 50.0% | |
| TCATGTCAGACGTGTCTAGG+TGG | + | chr3.3:94785028-94785047 | None:intergenic | 50.0% | |
| ! | AAGGCTTGGTAGTTGCGACT+TGG | + | chr3.3:94784613-94784632 | None:intergenic | 50.0% |
| ! | AATGGGTAGCTTGTCACCCT+AGG | - | chr3.3:94784892-94784911 | MS.gene064886:intron | 50.0% |
| ! | ATCAGCCTTACCTTGATGGC+TGG | - | chr3.3:94783200-94783219 | MS.gene064886:CDS | 50.0% |
| ! | ATCAGGCTTACCTTGATGGC+TGG | - | chr3.3:94783746-94783765 | MS.gene064886:CDS | 50.0% |
| ! | GCTTTGGTCTCCCCTTTTGT+GGG | + | chr3.3:94784714-94784733 | None:intergenic | 50.0% |
| ! | GGTAGTTGCGACTTGGAGAA+AGG | + | chr3.3:94784606-94784625 | None:intergenic | 50.0% |
| !! | AGCTTTGGTCTCCCCTTTTG+TGG | + | chr3.3:94784715-94784734 | None:intergenic | 50.0% |
| TGGCACATAGGAGCTTCCCC+AGG | + | chr3.3:94785089-94785108 | None:intergenic | 60.0% | |
| ATGGGCACCACTCCCACCAG+AGG | - | chr3.3:94785133-94785152 | MS.gene064886:CDS | 65.0% | |
| ! | TTGGTGGCCTCTGGTGGGAG+TGG | + | chr3.3:94785143-94785162 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 94782098 | 94785166 | 94782098 | ID=MS.gene064886 |
| chr3.3 | mRNA | 94782098 | 94785166 | 94782098 | ID=MS.gene064886.t1;Parent=MS.gene064886 |
| chr3.3 | exon | 94785113 | 94785166 | 94785113 | ID=MS.gene064886.t1.exon1;Parent=MS.gene064886.t1 |
| chr3.3 | CDS | 94785113 | 94785166 | 94785113 | ID=cds.MS.gene064886.t1;Parent=MS.gene064886.t1 |
| chr3.3 | exon | 94782098 | 94784131 | 94782098 | ID=MS.gene064886.t1.exon2;Parent=MS.gene064886.t1 |
| chr3.3 | CDS | 94782098 | 94784131 | 94782098 | ID=cds.MS.gene064886.t1;Parent=MS.gene064886.t1 |
| Gene Sequence |
| Protein sequence |
