Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23357.t1 | XP_003607078.1 | 98.3 | 302 | 5 | 0 | 1 | 302 | 49 | 350 | 8.10E-167 | 596.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23357.t1 | Q9SJU9 | 82.4 | 301 | 53 | 0 | 1 | 301 | 46 | 346 | 8.2e-144 | 511.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23357.t1 | G7JJX2 | 98.3 | 302 | 5 | 0 | 1 | 302 | 49 | 350 | 5.8e-167 | 596.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene23357 | 0.810178 | 1.31E-50 | -1.69E-46 |
| MS.gene049170 | MS.gene23357 | 0.826922 | 2.08E-54 | -1.69E-46 |
| MS.gene049284 | MS.gene23357 | 0.816691 | 4.85E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene23357 | 0.876502 | 1.33E-68 | -1.69E-46 |
| MS.gene049369 | MS.gene23357 | 0.847147 | 1.39E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene23357 | 0.828615 | 8.15E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene23357 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene23357 | 0.80373 | 3.03E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene23357 | 0.811775 | 5.91E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene23357 | 0.83936 | 1.66E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene23357 | 0.835506 | 1.61E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene23357 | 0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene23357 | 0.830354 | 3.08E-55 | -1.69E-46 |
| MS.gene050397 | MS.gene23357 | 0.81888 | 1.56E-52 | -1.69E-46 |
| MS.gene050404 | MS.gene23357 | 0.805634 | 1.21E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene23357 | 0.803263 | 3.79E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene23357 | -0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene23357 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene23357 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene23357 | 0.856789 | 2.54E-62 | -1.69E-46 |
| MS.gene050538 | MS.gene23357 | 0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene23357 | 0.868897 | 4.64E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene23357 | 0.803144 | 4.01E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene23357 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene23357 | 0.830001 | 3.75E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene23357 | 0.817481 | 3.22E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene23357 | 0.882753 | 8.00E-71 | -1.69E-46 |
| MS.gene051360 | MS.gene23357 | 0.818088 | 2.35E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene23357 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene23357 | 0.865107 | 7.50E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene23357 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene23357 | 0.829113 | 6.17E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene23357 | 0.802829 | 4.66E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene23357 | 0.816165 | 6.36E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene23357 | 0.834832 | 2.39E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene23357 | 0.838142 | 3.43E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene23357 | 0.848817 | 4.81E-60 | -1.69E-46 |
| MS.gene052136 | MS.gene23357 | 0.848557 | 5.68E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene23357 | 0.903973 | 1.99E-79 | -1.69E-46 |
| MS.gene052253 | MS.gene23357 | 0.873822 | 1.09E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene23357 | 0.869876 | 2.23E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene23357 | 0.841986 | 3.41E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene23357 | 0.882685 | 8.46E-71 | -1.69E-46 |
| MS.gene052414 | MS.gene23357 | 0.889246 | 2.87E-73 | -1.69E-46 |
| MS.gene052421 | MS.gene23357 | 0.836967 | 6.86E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene23357 | 0.852418 | 4.68E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene23357 | 0.856169 | 3.86E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene23357 | 0.85956 | 3.80E-63 | -1.69E-46 |
| MS.gene052505 | MS.gene23357 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene23357 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene23357 | 0.815059 | 1.12E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene23357 | 0.832547 | 8.88E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene23357 | 0.820734 | 5.87E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene23357 | 0.85365 | 2.08E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene23357 | 0.810867 | 9.31E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene23357 | 0.83663 | 8.36E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene23357 | 0.847308 | 1.26E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene23357 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene23357 | 0.852459 | 4.55E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene23357 | 0.806082 | 9.78E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene23357 | 0.825944 | 3.56E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene23357 | 0.849282 | 3.57E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene23357 | 0.806898 | 6.58E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene23357 | 0.812891 | 3.38E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene23357 | 0.843258 | 1.57E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene23357 | 0.902918 | 5.93E-79 | -1.69E-46 |
| MS.gene055206 | MS.gene23357 | 0.803674 | 3.11E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene23357 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene055289 | MS.gene23357 | 0.815314 | 9.85E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene23357 | 0.813681 | 2.26E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene23357 | 0.820714 | 5.93E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene23357 | 0.808029 | 3.79E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene23357 | 0.815041 | 1.13E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene23357 | 0.806431 | 8.25E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene23357 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene23357 | 0.82337 | 1.44E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene23357 | 0.801749 | 7.77E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene23357 | 0.864561 | 1.11E-64 | -1.69E-46 |
| MS.gene056609 | MS.gene23357 | 0.863487 | 2.40E-64 | -1.69E-46 |
| MS.gene056612 | MS.gene23357 | 0.803401 | 3.55E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene23357 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene23357 | 0.847047 | 1.48E-59 | -1.69E-46 |
| MS.gene056719 | MS.gene23357 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene23357 | 0.814304 | 1.65E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene23357 | 0.830729 | 2.49E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene23357 | 0.822176 | 2.72E-53 | -1.69E-46 |
| MS.gene057048 | MS.gene23357 | 0.801854 | 7.40E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene23357 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene23357 | 0.857014 | 2.18E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene23357 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene23357 | 0.807349 | 5.28E-50 | -1.69E-46 |
| MS.gene057207 | MS.gene23357 | 0.860092 | 2.63E-63 | -1.69E-46 |
| MS.gene05735 | MS.gene23357 | 0.806384 | 8.45E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene23357 | 0.821941 | 3.09E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene23357 | 0.826188 | 3.11E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene23357 | 0.815799 | 7.68E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene23357 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene057537 | MS.gene23357 | 0.821223 | 4.53E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene23357 | 0.836806 | 7.54E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene23357 | 0.855039 | 8.24E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene23357 | 0.852188 | 5.44E-61 | -1.69E-46 |
| MS.gene057825 | MS.gene23357 | 0.821294 | 4.36E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene23357 | 0.845125 | 4.93E-59 | -1.69E-46 |
| MS.gene058007 | MS.gene23357 | 0.848491 | 5.93E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene23357 | 0.854863 | 9.27E-62 | -1.69E-46 |
| MS.gene058090 | MS.gene23357 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene23357 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene23357 | 0.821836 | 3.27E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene23357 | 0.818702 | 1.71E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene23357 | 0.801275 | 9.72E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene23357 | 0.800981 | 1.12E-48 | -1.69E-46 |
| MS.gene058365 | MS.gene23357 | 0.831976 | 1.23E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene23357 | 0.851179 | 1.05E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene23357 | 0.828691 | 7.81E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene23357 | 0.845607 | 3.65E-59 | -1.69E-46 |
| MS.gene058710 | MS.gene23357 | 0.819703 | 1.01E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene23357 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene058748 | MS.gene23357 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene23357 | 0.804222 | 2.40E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene23357 | 0.89236 | 1.71E-74 | -1.69E-46 |
| MS.gene058948 | MS.gene23357 | 0.832357 | 9.90E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene23357 | 0.820902 | 5.37E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene23357 | 0.802443 | 5.60E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene23357 | 0.862665 | 4.32E-64 | -1.69E-46 |
| MS.gene059294 | MS.gene23357 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene23357 | 0.806936 | 6.46E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene23357 | 0.855176 | 7.52E-62 | -1.69E-46 |
| MS.gene059420 | MS.gene23357 | 0.827553 | 1.47E-54 | -1.69E-46 |
| MS.gene059455 | MS.gene23357 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene23357 | 0.828586 | 8.28E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene23357 | 0.855874 | 4.71E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene23357 | 0.829315 | 5.52E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene23357 | 0.894015 | 3.67E-75 | -1.69E-46 |
| MS.gene059692 | MS.gene23357 | 0.889089 | 3.31E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene23357 | 0.890565 | 8.78E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene23357 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene23357 | 0.822779 | 1.97E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene23357 | 0.845992 | 2.87E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene23357 | 0.84322 | 1.60E-58 | -1.69E-46 |
| MS.gene05986 | MS.gene23357 | 0.800156 | 1.65E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene23357 | 0.818519 | 1.88E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene23357 | 0.848098 | 7.61E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene23357 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene23357 | 0.854008 | 1.64E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene23357 | 0.842521 | 2.46E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene23357 | 0.823988 | 1.03E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene23357 | 0.856275 | 3.59E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene23357 | 0.866974 | 1.92E-65 | -1.69E-46 |
| MS.gene061049 | MS.gene23357 | 0.85865 | 7.12E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene23357 | -0.835541 | 1.58E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene23357 | 0.837452 | 5.16E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23357.t1 | MTR_4g072040 | 98.344 | 302 | 5 | 0 | 1 | 302 | 49 | 350 | 0.0 | 607 |
| MS.gene23357.t1 | MTR_4g072040 | 98.519 | 270 | 4 | 0 | 1 | 270 | 49 | 318 | 0.0 | 545 |
| MS.gene23357.t1 | MTR_4g072040 | 95.631 | 206 | 9 | 0 | 1 | 206 | 49 | 254 | 2.50e-142 | 401 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23357.t1 | AT2G21280 | 82.392 | 301 | 53 | 0 | 1 | 301 | 61 | 361 | 0.0 | 521 |
| MS.gene23357.t1 | AT2G21280 | 82.392 | 301 | 53 | 0 | 1 | 301 | 46 | 346 | 0.0 | 520 |
Find 78 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGAAATAATTGCTTTA+AGG | 0.095577 | 4.4:-37040839 | None:intergenic |
| GCAACAGCCGTTGGTTATTA+TGG | 0.241302 | 4.4:+37038714 | MS.gene23357:CDS |
| TTCAACAGGAGTTGTGAATT+TGG | 0.265572 | 4.4:+37038263 | MS.gene23357:CDS |
| TGAATACAATCTTTCCATTC+TGG | 0.270270 | 4.4:-37038237 | None:intergenic |
| TCAAGAAATAATTGCTTTAA+GGG | 0.286542 | 4.4:-37040838 | None:intergenic |
| TCTGATAATCGCACAGGATT+TGG | 0.287636 | 4.4:-37040550 | None:intergenic |
| TGAACAGCTGGGAAATGTTT+TGG | 0.324340 | 4.4:+37040579 | MS.gene23357:CDS |
| ATTCGCATCGGTGTTGTTCT+TGG | 0.330353 | 4.4:+37039496 | MS.gene23357:CDS |
| TCCATCTGGAAAGGATTATC+TGG | 0.334195 | 4.4:+37038964 | MS.gene23357:CDS |
| TTTGCACTCAAGGCTGTTCT+TGG | 0.337880 | 4.4:+37040631 | MS.gene23357:CDS |
| AGTGAATAGTTTACCTTTGT+AGG | 0.341005 | 4.4:-37040084 | None:intergenic |
| TGAAATTCGACCCAAAGTTT+TGG | 0.354784 | 4.4:+37038686 | MS.gene23357:CDS |
| CTTTAGATTTAGAGCGTGTC+AGG | 0.375570 | 4.4:-37037758 | None:intergenic |
| GATTGTATTCAGGGTTCAAC+AGG | 0.387898 | 4.4:+37038249 | MS.gene23357:CDS |
| CAAATGATCATATCTGTAAC+TGG | 0.388348 | 4.4:+37037283 | None:intergenic |
| ATCAGAATTGTGTGAACAGC+TGG | 0.389039 | 4.4:+37040567 | MS.gene23357:CDS |
| AGAATGGAAAGATTGTATTC+AGG | 0.393704 | 4.4:+37038239 | MS.gene23357:CDS |
| GAAGACCATCTGGTACTTAT+CGG | 0.402363 | 4.4:-37038294 | None:intergenic |
| TTTCCAGGAGTCAAGATTGC+TGG | 0.403323 | 4.4:+37038210 | MS.gene23357:CDS |
| TGTTGCACTAACCAAAACTT+TGG | 0.420203 | 4.4:-37038697 | None:intergenic |
| GAATGGAAAGATTGTATTCA+GGG | 0.421699 | 4.4:+37038240 | MS.gene23357:CDS |
| ATATCTGTAACTGGAGCAAC+AGG | 0.436339 | 4.4:+37037292 | MS.gene23357:CDS |
| TTTGATGAACAAAGTCCATC+TGG | 0.438138 | 4.4:+37038950 | MS.gene23357:CDS |
| ATGTTTGCCGGCGGACCTCT+AGG | 0.442511 | 4.4:+37039699 | MS.gene23357:CDS |
| AGAAAGAAATCAAGGAGAGC+AGG | 0.446253 | 4.4:+37038480 | MS.gene23357:CDS |
| TCCCCAGCAATCTTGACTCC+TGG | 0.446910 | 4.4:-37038213 | None:intergenic |
| ACTTTGGGTCGAATTTCATC+TGG | 0.451563 | 4.4:-37038681 | None:intergenic |
| GGGTCGTCCCTCATGGCTGC+CGG | 0.452471 | 4.4:+37040600 | MS.gene23357:CDS |
| TTTCCAGTGAAAGACTTTCC+AGG | 0.460284 | 4.4:+37038195 | MS.gene23357:intron |
| TTCCAGGAGTCAAGATTGCT+GGG | 0.471601 | 4.4:+37038211 | MS.gene23357:CDS |
| TGAATATTAGGAGTTATCAA+TGG | 0.472534 | 4.4:+37040520 | MS.gene23357:intron |
| ATGGGAATCAACGGCGCTAA+AGG | 0.475110 | 4.4:+37039447 | MS.gene23357:CDS |
| GCCGGCGGACCTCTAGGATC+TGG | 0.476163 | 4.4:+37039705 | MS.gene23357:CDS |
| ATCAAAGACCTGTGTCTCAC+TGG | 0.480227 | 4.4:-37038933 | None:intergenic |
| GTTGCACTAACCAAAACTTT+GGG | 0.487621 | 4.4:-37038696 | None:intergenic |
| TCCTACTCAAGCGAAGAAGC+TGG | 0.489478 | 4.4:+37040782 | MS.gene23357:CDS |
| CTCAAGGCTGTTCTTGGTGA+AGG | 0.490108 | 4.4:+37040637 | MS.gene23357:CDS |
| AATAGTTTACCTTTGTAGGA+TGG | 0.497739 | 4.4:-37040080 | None:intergenic |
| TCTGGTACTTATCGGCAATC+CGG | 0.498322 | 4.4:-37038286 | None:intergenic |
| TCAGATAAAGAAAGAAATCA+AGG | 0.501501 | 4.4:+37038472 | MS.gene23357:intron |
| ACAGGAGTTGTGAATTTGGC+CGG | 0.506650 | 4.4:+37038267 | MS.gene23357:CDS |
| ACAGCCTTGAGTGCAAAGTC+AGG | 0.520440 | 4.4:-37040625 | None:intergenic |
| GAAAGAAATCAAGGAGAGCA+GGG | 0.521820 | 4.4:+37038481 | MS.gene23357:CDS |
| GGTAAAGATGGTGGAGCACT+AGG | 0.524807 | 4.4:+37039517 | MS.gene23357:CDS |
| AGATTGCTGGGGAACCAGAA+TGG | 0.527962 | 4.4:+37038223 | MS.gene23357:CDS |
| CTCTAGGATCTGGAAATCAA+TGG | 0.536271 | 4.4:+37039715 | MS.gene23357:CDS |
| GGTACCTGACTTTGCACTCA+AGG | 0.544437 | 4.4:+37040621 | MS.gene23357:CDS |
| AATGTCATCTAGATGAATCC+AGG | 0.545445 | 4.4:-37040027 | None:intergenic |
| CCTACTCAAGCGAAGAAGCT+GGG | 0.546377 | 4.4:+37040783 | MS.gene23357:CDS |
| TCCAGATCCTAGAGGTCCGC+CGG | 0.548152 | 4.4:-37039706 | None:intergenic |
| GGTGTTGTTCTTGGTAAAGA+TGG | 0.549228 | 4.4:+37039505 | MS.gene23357:CDS |
| CACAATTCTGATAATCGCAC+AGG | 0.550105 | 4.4:-37040556 | None:intergenic |
| AATAACCTCAGAAGACCATC+TGG | 0.553327 | 4.4:-37038304 | None:intergenic |
| TTGAGTGCAAAGTCAGGTAC+CGG | 0.557165 | 4.4:-37040619 | None:intergenic |
| TGGAAAGGATTATCTGGCTG+AGG | 0.563447 | 4.4:+37038970 | MS.gene23357:CDS |
| CCGGCAAACATCATGAAAAG+AGG | 0.568087 | 4.4:-37039687 | None:intergenic |
| GCCAGATAATCCTTTCCAGA+TGG | 0.570687 | 4.4:-37038965 | None:intergenic |
| TCAGGTACCGGCAGCCATGA+GGG | 0.572098 | 4.4:-37040607 | None:intergenic |
| TTGGTTAGTGCAACAGCCGT+TGG | 0.579483 | 4.4:+37038705 | MS.gene23357:CDS |
| AGCCACTCTAACATCTCCAT+TGG | 0.581156 | 4.4:-37039470 | None:intergenic |
| TTGGTGCAAAAGCTGCAAGC+AGG | 0.582005 | 4.4:+37037331 | MS.gene23357:CDS |
| TGAACAAAGTCCATCTGGAA+AGG | 0.591662 | 4.4:+37038955 | MS.gene23357:CDS |
| ACCAGGCACCAGTGAGACAC+AGG | 0.597945 | 4.4:+37038925 | MS.gene23357:intron |
| TCAACGGCGCTAAAGGCCAA+TGG | 0.604792 | 4.4:+37039454 | MS.gene23357:CDS |
| GTCAGGTACCGGCAGCCATG+AGG | 0.605273 | 4.4:-37040608 | None:intergenic |
| TCAGAATTGTGTGAACAGCT+GGG | 0.607624 | 4.4:+37040568 | MS.gene23357:CDS |
| ATGCAGAGAATGGGAATCAA+CGG | 0.609452 | 4.4:+37039438 | MS.gene23357:CDS |
| GTTGTTCTTGGTAAAGATGG+TGG | 0.616711 | 4.4:+37039508 | MS.gene23357:CDS |
| CCCAGCTTCTTCGCTTGAGT+AGG | 0.629518 | 4.4:-37040783 | None:intergenic |
| TCTTGGTGAAGGTGCTACTG+TGG | 0.633275 | 4.4:+37040648 | MS.gene23357:CDS |
| CTATCAAATCCATCCTACAA+AGG | 0.644854 | 4.4:+37040071 | MS.gene23357:CDS |
| AGAGTGGCTCTAATTCGCAT+CGG | 0.649797 | 4.4:+37039484 | MS.gene23357:CDS |
| GATTGCCGATAAGTACCAGA+TGG | 0.655738 | 4.4:+37038289 | MS.gene23357:CDS |
| GGCCAATGGAGATGTTAGAG+TGG | 0.661233 | 4.4:+37039468 | MS.gene23357:CDS |
| AAGTACCAGATGGTCTTCTG+AGG | 0.661589 | 4.4:+37038299 | MS.gene23357:CDS |
| CATTGATTTCCAGATCCTAG+AGG | 0.666245 | 4.4:-37039714 | None:intergenic |
| AGACATACCATAATAACCAA+CGG | 0.668091 | 4.4:-37038721 | None:intergenic |
| TCCAGGAGTCAAGATTGCTG+GGG | 0.679418 | 4.4:+37038212 | MS.gene23357:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTCAAATGATATAAAT+AGG | - | chr4.4:37037661-37037680 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr4.4:37038086-37038105 | MS.gene23357:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr4.4:37038105-37038086 | None:intergenic | 15.0% |
| !!! | TAAATATTTTTGCAAAATGA+TGG | + | chr4.4:37039146-37039165 | MS.gene23357:intron | 15.0% |
| !!! | TTTTGATCTTTTGAAAAAAT+TGG | - | chr4.4:37037881-37037900 | None:intergenic | 15.0% |
| !! | AATATTCATAAACAAGATTC+AGG | - | chr4.4:37040508-37040527 | None:intergenic | 20.0% |
| !! | AATTCAATTTACTAATGTCA+TGG | + | chr4.4:37039917-37039936 | MS.gene23357:intron | 20.0% |
| !! | ACAATGATATATTACCAATA+TGG | + | chr4.4:37040232-37040251 | MS.gene23357:intron | 20.0% |
| !! | AGGTATAAATGTACTAAAAA+AGG | - | chr4.4:37037419-37037438 | None:intergenic | 20.0% |
| !! | ATATTCATAAACAAGATTCA+GGG | - | chr4.4:37040507-37040526 | None:intergenic | 20.0% |
| !! | ATTTATCTGTTTATCATAGA+AGG | + | chr4.4:37037468-37037487 | MS.gene23357:intron | 20.0% |
| !! | GGTATAAATGTACTAAAAAA+GGG | - | chr4.4:37037418-37037437 | None:intergenic | 20.0% |
| !! | GTATAAATGTACTAAAAAAG+GGG | - | chr4.4:37037417-37037436 | None:intergenic | 20.0% |
| !! | TATTACTCACAAATTTCATA+AGG | + | chr4.4:37039099-37039118 | MS.gene23357:intron | 20.0% |
| !! | TCAAGAAATAATTGCTTTAA+GGG | - | chr4.4:37040841-37040860 | None:intergenic | 20.0% |
| !! | TTAAATAATATTCCCTCAAT+TGG | - | chr4.4:37038537-37038556 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr4.4:37037988-37038007 | MS.gene23357:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | - | chr4.4:37038007-37037988 | None:intergenic | 20.0% |
| !!! | GAATCTTGTTTATGAATATT+AGG | + | chr4.4:37040508-37040527 | MS.gene23357:intron | 20.0% |
| !!! | TTATCAGAATTTTTTTAGCA+TGG | - | chr4.4:37039229-37039248 | None:intergenic | 20.0% |
| ! | AATACCAAGTAAGAATTAAC+TGG | - | chr4.4:37038177-37038196 | None:intergenic | 25.0% |
| ! | ACTTATCTATTTAGGCATTA+TGG | + | chr4.4:37039555-37039574 | MS.gene23357:intron | 25.0% |
| ! | ATAATGCCTAAATAGATAAG+TGG | - | chr4.4:37039556-37039575 | None:intergenic | 25.0% |
| ! | ATATAACGTTATAGATTTCG+AGG | + | chr4.4:37037545-37037564 | MS.gene23357:intron | 25.0% |
| ! | ATATGGTGCTTATAAGATAA+AGG | - | chr4.4:37037924-37037943 | None:intergenic | 25.0% |
| ! | ATGTCTTTCCCAAAATATAA+AGG | - | chr4.4:37039253-37039272 | None:intergenic | 25.0% |
| ! | ATTATGAAGCAAATGTAGAA+AGG | - | chr4.4:37037389-37037408 | None:intergenic | 25.0% |
| ! | ATTTATTCATTTCATTGCGA+AGG | + | chr4.4:37038635-37038654 | MS.gene23357:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr4.4:37038052-37038071 | None:intergenic | 25.0% |
| ! | CTTATCTATTTAGGCATTAT+GGG | + | chr4.4:37039556-37039575 | MS.gene23357:intron | 25.0% |
| ! | GATAAAGGTAAGTTAGATTT+AGG | - | chr4.4:37037909-37037928 | None:intergenic | 25.0% |
| ! | GGTTGTAGATTTGATAAAAA+AGG | + | chr4.4:37038656-37038675 | MS.gene23357:intron | 25.0% |
| ! | GTTAATTAAAATGATCACAC+AGG | + | chr4.4:37038787-37038806 | MS.gene23357:intron | 25.0% |
| ! | TAATATATTACCTTCTTACC+CGG | - | chr4.4:37037798-37037817 | None:intergenic | 25.0% |
| ! | TCAGATAAAGAAAGAAATCA+AGG | + | chr4.4:37038472-37038491 | MS.gene23357:intron | 25.0% |
| ! | TGAATATTAGGAGTTATCAA+TGG | + | chr4.4:37040520-37040539 | MS.gene23357:intron | 25.0% |
| ! | TGTCTTTCCCAAAATATAAA+GGG | - | chr4.4:37039252-37039271 | None:intergenic | 25.0% |
| ! | TTAACCAGTTAATTCTTACT+TGG | + | chr4.4:37038170-37038189 | MS.gene23357:intron | 25.0% |
| ! | TTAACTATTAGTATGCTTTG+AGG | - | chr4.4:37038129-37038148 | None:intergenic | 25.0% |
| ! | TTATCTATTTAGGCATTATG+GGG | + | chr4.4:37039557-37039576 | MS.gene23357:intron | 25.0% |
| ! | TTCATATTAGAAGATCGATA+TGG | - | chr4.4:37040707-37040726 | None:intergenic | 25.0% |
| ! | TTCTAACCACTTATCTATTT+AGG | + | chr4.4:37039547-37039566 | MS.gene23357:intron | 25.0% |
| !! | AATGATATATATGAGAGCAT+TGG | - | chr4.4:37037451-37037470 | None:intergenic | 25.0% |
| !! | CTGATAACCCTTTATATTTT+GGG | + | chr4.4:37039242-37039261 | MS.gene23357:intron | 25.0% |
| !! | CTTTTTCCTTAGAACTAATT+TGG | + | chr4.4:37038388-37038407 | MS.gene23357:intron | 25.0% |
| !! | GTTAGAAAATGCATTACTTT+TGG | + | chr4.4:37038828-37038847 | MS.gene23357:intron | 25.0% |
| !! | TAAAGCAGAACTAATTTTTC+CGG | + | chr4.4:37037776-37037795 | MS.gene23357:CDS | 25.0% |
| !! | TCTGATAACCCTTTATATTT+TGG | + | chr4.4:37039241-37039260 | MS.gene23357:intron | 25.0% |
| !!! | AAATCCAGTTTTTGAGATAT+GGG | - | chr4.4:37040110-37040129 | None:intergenic | 25.0% |
| !!! | AAGAAACCAAATTAGTTCTA+AGG | - | chr4.4:37038397-37038416 | None:intergenic | 25.0% |
| !!! | AGGTTTTATAGGTAAAAGAT+TGG | + | chr4.4:37037312-37037331 | MS.gene23357:CDS | 25.0% |
| !!! | ATGATATATATGAGAGCATT+GGG | - | chr4.4:37037450-37037469 | None:intergenic | 25.0% |
| !!! | TCTTTTTTGTTTTTCCATAC+AGG | + | chr4.4:37040000-37040019 | MS.gene23357:intron | 25.0% |
| !!! | TGTCTAAGTAATGGATTAAA+AGG | - | chr4.4:37039787-37039806 | None:intergenic | 25.0% |
| !!! | TTTATATTTTGGGAAAGACA+TGG | + | chr4.4:37039252-37039271 | MS.gene23357:intron | 25.0% |
| AATAGATAAGTGGTTAGAAC+TGG | - | chr4.4:37039546-37039565 | None:intergenic | 30.0% | |
| AATAGTTTACCTTTGTAGGA+TGG | - | chr4.4:37040083-37040102 | None:intergenic | 30.0% | |
| AATATGTTTAATCAGAACCG+TGG | - | chr4.4:37039323-37039342 | None:intergenic | 30.0% | |
| AGAATGGAAAGATTGTATTC+AGG | + | chr4.4:37038239-37038258 | MS.gene23357:CDS | 30.0% | |
| AGACATACCATAATAACCAA+CGG | - | chr4.4:37038724-37038743 | None:intergenic | 30.0% | |
| AGTGAATAGTTTACCTTTGT+AGG | - | chr4.4:37040087-37040106 | None:intergenic | 30.0% | |
| ATATACTTACACCTAGTTAG+AGG | + | chr4.4:37038361-37038380 | MS.gene23357:intron | 30.0% | |
| ATGAAAACCAACAACAGATA+TGG | - | chr4.4:37037941-37037960 | None:intergenic | 30.0% | |
| ATGAATGGTTTGAAGACTTA+CGG | + | chr4.4:37040262-37040281 | MS.gene23357:intron | 30.0% | |
| ATTGTTCAGCAAAGAAAACT+TGG | - | chr4.4:37039069-37039088 | None:intergenic | 30.0% | |
| CACATGATGCAAATATTTAC+CGG | - | chr4.4:37037581-37037600 | None:intergenic | 30.0% | |
| CAGGTGTTAATTAAATGCTT+TGG | + | chr4.4:37038806-37038825 | MS.gene23357:intron | 30.0% | |
| CATTCATTTAACGATGTATG+TGG | + | chr4.4:37038013-37038032 | MS.gene23357:intron | 30.0% | |
| CATTGTGATTCATTAGTGTA+AGG | - | chr4.4:37040218-37040237 | None:intergenic | 30.0% | |
| CTTTCTACTTAATTATGACC+AGG | + | chr4.4:37038908-37038927 | MS.gene23357:intron | 30.0% | |
| GAAAAAGATAACCTCTAACT+AGG | - | chr4.4:37038375-37038394 | None:intergenic | 30.0% | |
| GAATGGAAAGATTGTATTCA+GGG | + | chr4.4:37038240-37038259 | MS.gene23357:CDS | 30.0% | |
| GATGTATGTGGTTCATAATA+TGG | - | chr4.4:37038040-37038059 | None:intergenic | 30.0% | |
| GCAGAGTAGTGATATAATTA+AGG | - | chr4.4:37037613-37037632 | None:intergenic | 30.0% | |
| TAAGTATGCATTCCAATTGA+GGG | + | chr4.4:37038522-37038541 | MS.gene23357:intron | 30.0% | |
| TAATTATATCACTACTCTGC+AGG | + | chr4.4:37037613-37037632 | MS.gene23357:intron | 30.0% | |
| TAGCGAAATGTTAGATTGAT+TGG | - | chr4.4:37039364-37039383 | None:intergenic | 30.0% | |
| TAGTGAGAGTAATAGAAACA+CGG | - | chr4.4:37038331-37038350 | None:intergenic | 30.0% | |
| TGAATACAATCTTTCCATTC+TGG | - | chr4.4:37038240-37038259 | None:intergenic | 30.0% | |
| ! | AAAGCAGAACTAATTTTTCC+GGG | + | chr4.4:37037777-37037796 | MS.gene23357:CDS | 30.0% |
| ! | AACCAATAGAGAACCATTTT+TGG | - | chr4.4:37038752-37038771 | None:intergenic | 30.0% |
| ! | GGTTTCTTTGTTTGCTAATT+TGG | + | chr4.4:37038409-37038428 | MS.gene23357:intron | 30.0% |
| ! | TCTTTTGCCTTATCTCTTAA+TGG | + | chr4.4:37038435-37038454 | MS.gene23357:intron | 30.0% |
| ! | TGTAGTGGAAAATTGTTTGA+TGG | - | chr4.4:37039814-37039833 | None:intergenic | 30.0% |
| ! | TTTATCATAGAAGGTGCATT+GGG | + | chr4.4:37037477-37037496 | MS.gene23357:intron | 30.0% |
| !!! | ATCTCTTTGTAGGTTTTAGA+AGG | + | chr4.4:37040747-37040766 | MS.gene23357:intron | 30.0% |
| !!! | CAAATCCAGTTTTTGAGATA+TGG | - | chr4.4:37040111-37040130 | None:intergenic | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr4.4:37038090-37038109 | MS.gene23357:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr4.4:37038109-37038090 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr4.4:37038089-37038108 | MS.gene23357:intron | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr4.4:37038108-37038089 | None:intergenic | 30.0% |
| AACATAAGAGAACTATGACC+AGG | - | chr4.4:37037518-37037537 | None:intergenic | 35.0% | |
| AATGTCATCTAGATGAATCC+AGG | - | chr4.4:37040030-37040049 | None:intergenic | 35.0% | |
| ATAAGCACCATATCTGTTGT+TGG | + | chr4.4:37037931-37037950 | MS.gene23357:intron | 35.0% | |
| ATGATAAGCCCTTAATGAAG+AGG | - | chr4.4:37040303-37040322 | None:intergenic | 35.0% | |
| CAATATGGAGCACAAATGAA+TGG | + | chr4.4:37040247-37040266 | MS.gene23357:intron | 35.0% | |
| CAGTTTCTTACACTCGTAAT+TGG | + | chr4.4:37039747-37039766 | MS.gene23357:intron | 35.0% | |
| CATTCATTTGTGCTCCATAT+TGG | - | chr4.4:37040249-37040268 | None:intergenic | 35.0% | |
| CGGATAAACCTCTTCATTAA+GGG | + | chr4.4:37040292-37040311 | MS.gene23357:intron | 35.0% | |
| CGGTAAATATTTGCATCATG+TGG | + | chr4.4:37037579-37037598 | MS.gene23357:intron | 35.0% | |
| CTATCAAATCCATCCTACAA+AGG | + | chr4.4:37040071-37040090 | MS.gene23357:CDS | 35.0% | |
| GAATAAATCAGCAGCAGAAT+AGG | - | chr4.4:37038623-37038642 | None:intergenic | 35.0% | |
| GAGATTAACAGTGCATTTGA+TGG | - | chr4.4:37040732-37040751 | None:intergenic | 35.0% | |
| GATTCATTAGTGTAAGGCAT+GGG | - | chr4.4:37040212-37040231 | None:intergenic | 35.0% | |
| GCAAACACCATTAAGAGATA+AGG | - | chr4.4:37038445-37038464 | None:intergenic | 35.0% | |
| GTAAGTATGCATTCCAATTG+AGG | + | chr4.4:37038521-37038540 | MS.gene23357:intron | 35.0% | |
| GTATGTCTGTATGCCAAAAA+TGG | + | chr4.4:37038736-37038755 | MS.gene23357:intron | 35.0% | |
| GTGGAAAATTGTTTGATGGA+TGG | - | chr4.4:37039810-37039829 | None:intergenic | 35.0% | |
| GTTGCACTAACCAAAACTTT+GGG | - | chr4.4:37038699-37038718 | None:intergenic | 35.0% | |
| TGATTCATTAGTGTAAGGCA+TGG | - | chr4.4:37040213-37040232 | None:intergenic | 35.0% | |
| TGCACTGTTAATCTCTTTGT+AGG | + | chr4.4:37040737-37040756 | MS.gene23357:intron | 35.0% | |
| TGCCAAAAATGGTTCTCTAT+TGG | + | chr4.4:37038747-37038766 | MS.gene23357:intron | 35.0% | |
| TGTTGCACTAACCAAAACTT+TGG | - | chr4.4:37038700-37038719 | None:intergenic | 35.0% | |
| TTCAACAGGAGTTGTGAATT+TGG | + | chr4.4:37038263-37038282 | MS.gene23357:CDS | 35.0% | |
| TTTGATGAACAAAGTCCATC+TGG | + | chr4.4:37038950-37038969 | MS.gene23357:CDS | 35.0% | |
| ! | ACATGCTTTTGCAAAATGTG+AGG | - | chr4.4:37037841-37037860 | None:intergenic | 35.0% |
| ! | ACTAATTTTTCCGGGTAAGA+AGG | + | chr4.4:37037785-37037804 | MS.gene23357:intron | 35.0% |
| ! | ATCGATATGGATTGATGACA+TGG | - | chr4.4:37040694-37040713 | None:intergenic | 35.0% |
| ! | GTTTATCATAGAAGGTGCAT+TGG | + | chr4.4:37037476-37037495 | MS.gene23357:intron | 35.0% |
| ! | TGAAATTCGACCCAAAGTTT+TGG | + | chr4.4:37038686-37038705 | MS.gene23357:CDS | 35.0% |
| ! | TTTTCCACTACAATACACCT+TGG | + | chr4.4:37039822-37039841 | MS.gene23357:intron | 35.0% |
| !! | AATCACTTGTGAGAGCATTT+GGG | - | chr4.4:37040410-37040429 | None:intergenic | 35.0% |
| !! | ATTTCGAGGCTTTAAAAGAC+CGG | + | chr4.4:37037559-37037578 | MS.gene23357:intron | 35.0% |
| !! | GCAATTTTGAAAACACACCA+AGG | - | chr4.4:37039842-37039861 | None:intergenic | 35.0% |
| !! | GGAATGCATACTTACTTTTG+AGG | - | chr4.4:37038516-37038535 | None:intergenic | 35.0% |
| !! | TAATCACTTGTGAGAGCATT+TGG | - | chr4.4:37040411-37040430 | None:intergenic | 35.0% |
| !!! | TTTTCAGGTATGCAGAGAAT+GGG | + | chr4.4:37039429-37039448 | MS.gene23357:intron | 35.0% |
| AATAACCTCAGAAGACCATC+TGG | - | chr4.4:37038307-37038326 | None:intergenic | 40.0% | |
| ACATAATCCTTCAGAGTCCA+CGG | + | chr4.4:37039303-37039322 | MS.gene23357:intron | 40.0% | |
| ACTTTGGGTCGAATTTCATC+TGG | - | chr4.4:37038684-37038703 | None:intergenic | 40.0% | |
| AGAAAGAAATCAAGGAGAGC+AGG | + | chr4.4:37038480-37038499 | MS.gene23357:CDS | 40.0% | |
| AGATTAGACGACAGGCAAAA+TGG | - | chr4.4:37040187-37040206 | None:intergenic | 40.0% | |
| AGCTATGCTGATAAGATCTG+CGG | + | chr4.4:37039879-37039898 | MS.gene23357:intron | 40.0% | |
| ATATCTGTAACTGGAGCAAC+AGG | + | chr4.4:37037292-37037311 | MS.gene23357:CDS | 40.0% | |
| ATCAGAATTGTGTGAACAGC+TGG | + | chr4.4:37040567-37040586 | MS.gene23357:CDS | 40.0% | |
| ATGCAGAGAATGGGAATCAA+CGG | + | chr4.4:37039438-37039457 | MS.gene23357:CDS | 40.0% | |
| ATTTGGAGGTAGTCACATTC+TGG | + | chr4.4:37039976-37039995 | MS.gene23357:intron | 40.0% | |
| CACAATTCTGATAATCGCAC+AGG | - | chr4.4:37040559-37040578 | None:intergenic | 40.0% | |
| CACTCCCATATCTCAAAAAC+TGG | + | chr4.4:37040103-37040122 | MS.gene23357:intron | 40.0% | |
| CCTCCAAATTAAGACGCAAA+CGG | - | chr4.4:37039965-37039984 | None:intergenic | 40.0% | |
| CTCTGCATACCTGAAAAGAT+GGG | - | chr4.4:37039426-37039445 | None:intergenic | 40.0% | |
| CTGTGGTAAGGAATCATTTC+TGG | + | chr4.4:37040665-37040684 | MS.gene23357:intron | 40.0% | |
| GAAAGAAATCAAGGAGAGCA+GGG | + | chr4.4:37038481-37038500 | MS.gene23357:CDS | 40.0% | |
| GAAGACCATCTGGTACTTAT+CGG | - | chr4.4:37038297-37038316 | None:intergenic | 40.0% | |
| GATGGATGGTGTCTAAGTAA+TGG | - | chr4.4:37039796-37039815 | None:intergenic | 40.0% | |
| GATTGTATTCAGGGTTCAAC+AGG | + | chr4.4:37038249-37038268 | MS.gene23357:CDS | 40.0% | |
| GCGGATAAACCTCTTCATTA+AGG | + | chr4.4:37040291-37040310 | MS.gene23357:intron | 40.0% | |
| GTGTTGAACCTCTTAACAGA+TGG | + | chr4.4:37039168-37039187 | MS.gene23357:intron | 40.0% | |
| GTTGTTCTTGGTAAAGATGG+TGG | + | chr4.4:37039508-37039527 | MS.gene23357:CDS | 40.0% | |
| TCAGAATTGTGTGAACAGCT+GGG | + | chr4.4:37040568-37040587 | MS.gene23357:CDS | 40.0% | |
| TCCATCTGGAAAGGATTATC+TGG | + | chr4.4:37038964-37038983 | MS.gene23357:CDS | 40.0% | |
| TCTCTGCATACCTGAAAAGA+TGG | - | chr4.4:37039427-37039446 | None:intergenic | 40.0% | |
| TCTGATAATCGCACAGGATT+TGG | - | chr4.4:37040553-37040572 | None:intergenic | 40.0% | |
| TGAACAAAGTCCATCTGGAA+AGG | + | chr4.4:37038955-37038974 | MS.gene23357:CDS | 40.0% | |
| TTTCCAGTGAAAGACTTTCC+AGG | + | chr4.4:37038195-37038214 | MS.gene23357:intron | 40.0% | |
| ! | CCTCTTTTCATGATGTTTGC+CGG | + | chr4.4:37039687-37039706 | MS.gene23357:CDS | 40.0% |
| ! | CTTTAGATTTAGAGCGTGTC+AGG | - | chr4.4:37037761-37037780 | None:intergenic | 40.0% |
| ! | GAACAGCTGGGAAATGTTTT+GGG | + | chr4.4:37040580-37040599 | MS.gene23357:CDS | 40.0% |
| ! | TGAACAGCTGGGAAATGTTT+TGG | + | chr4.4:37040579-37040598 | MS.gene23357:CDS | 40.0% |
| ! | TTTTTCCATACAGGTTCTCC+TGG | + | chr4.4:37040009-37040028 | MS.gene23357:intron | 40.0% |
| !! | ACTGGAGCAACAGGTTTTAT+AGG | + | chr4.4:37037301-37037320 | MS.gene23357:CDS | 40.0% |
| !! | CATTGATTTCCAGATCCTAG+AGG | - | chr4.4:37039717-37039736 | None:intergenic | 40.0% |
| !! | CTCTAGGATCTGGAAATCAA+TGG | + | chr4.4:37039715-37039734 | MS.gene23357:CDS | 40.0% |
| !! | GAGAGCATTGGGAAAATGTT+AGG | - | chr4.4:37037439-37037458 | None:intergenic | 40.0% |
| !! | GGTGTTGTTCTTGGTAAAGA+TGG | + | chr4.4:37039505-37039524 | MS.gene23357:CDS | 40.0% |
| !!! | AGGTATCATTTTAGCTGCAG+TGG | - | chr4.4:37039670-37039689 | None:intergenic | 40.0% |
| !!! | CTTTTCAGGTATGCAGAGAA+TGG | + | chr4.4:37039428-37039447 | MS.gene23357:intron | 40.0% |
| !!! | GGTTTTAGAAGGACAAAGAG+TGG | + | chr4.4:37040758-37040777 | MS.gene23357:intron | 40.0% |
| AAGTACCAGATGGTCTTCTG+AGG | + | chr4.4:37038299-37038318 | MS.gene23357:CDS | 45.0% | |
| ACAGGAGTTGTGAATTTGGC+CGG | + | chr4.4:37038267-37038286 | MS.gene23357:CDS | 45.0% | |
| ACTCCTGGAAAGTCTTTCAC+TGG | - | chr4.4:37038201-37038220 | None:intergenic | 45.0% | |
| AGCCACTCTAACATCTCCAT+TGG | - | chr4.4:37039473-37039492 | None:intergenic | 45.0% | |
| ATCAAAGACCTGTGTCTCAC+TGG | - | chr4.4:37038936-37038955 | None:intergenic | 45.0% | |
| CACACCAAGGTGTATTGTAG+TGG | - | chr4.4:37039829-37039848 | None:intergenic | 45.0% | |
| CCGGCAAACATCATGAAAAG+AGG | - | chr4.4:37039690-37039709 | None:intergenic | 45.0% | |
| CTGTGACTCCATCTGTTAAG+AGG | - | chr4.4:37039179-37039198 | None:intergenic | 45.0% | |
| GATTGCCGATAAGTACCAGA+TGG | + | chr4.4:37038289-37038308 | MS.gene23357:CDS | 45.0% | |
| GCCAGATAATCCTTTCCAGA+TGG | - | chr4.4:37038968-37038987 | None:intergenic | 45.0% | |
| GGATTATCTGGCTGAGGTAA+AGG | + | chr4.4:37038976-37038995 | MS.gene23357:intron | 45.0% | |
| GGGATTGTATTGTACTCTCC+TGG | + | chr4.4:37037497-37037516 | MS.gene23357:intron | 45.0% | |
| TCTGGTACTTATCGGCAATC+CGG | - | chr4.4:37038289-37038308 | None:intergenic | 45.0% | |
| TGAAGAGGTTTATCCGCACA+TGG | - | chr4.4:37040288-37040307 | None:intergenic | 45.0% | |
| TGAATCCAGGAGAACCTGTA+TGG | - | chr4.4:37040017-37040036 | None:intergenic | 45.0% | |
| TGGAAAGGATTATCTGGCTG+AGG | + | chr4.4:37038970-37038989 | MS.gene23357:CDS | 45.0% | |
| TTCCAGGAGTCAAGATTGCT+GGG | + | chr4.4:37038211-37038230 | MS.gene23357:CDS | 45.0% | |
| TTGAGTGCAAAGTCAGGTAC+CGG | - | chr4.4:37040622-37040641 | None:intergenic | 45.0% | |
| TTTCCAGGAGTCAAGATTGC+TGG | + | chr4.4:37038210-37038229 | MS.gene23357:CDS | 45.0% | |
| TTTGCACTCAAGGCTGTTCT+TGG | + | chr4.4:37040631-37040650 | MS.gene23357:CDS | 45.0% | |
| ! | CCGTTTGCGTCTTAATTTGG+AGG | + | chr4.4:37039962-37039981 | MS.gene23357:intron | 45.0% |
| ! | CTAGTAAGTACTGCCAGAGA+CGG | - | chr4.4:37037365-37037384 | None:intergenic | 45.0% |
| ! | CTGAATCTGCCCATCTTTTC+AGG | + | chr4.4:37039414-37039433 | MS.gene23357:intron | 45.0% |
| ! | CTTTTCATGATGTTTGCCGG+CGG | + | chr4.4:37039690-37039709 | MS.gene23357:CDS | 45.0% |
| ! | GCAACAGCCGTTGGTTATTA+TGG | + | chr4.4:37038714-37038733 | MS.gene23357:CDS | 45.0% |
| !! | AGAGTGGCTCTAATTCGCAT+CGG | + | chr4.4:37039484-37039503 | MS.gene23357:CDS | 45.0% |
| !! | ATTCGCATCGGTGTTGTTCT+TGG | + | chr4.4:37039496-37039515 | MS.gene23357:CDS | 45.0% |
| ACAGCCTTGAGTGCAAAGTC+AGG | - | chr4.4:37040628-37040647 | None:intergenic | 50.0% | |
| AGATTGCTGGGGAACCAGAA+TGG | + | chr4.4:37038223-37038242 | MS.gene23357:CDS | 50.0% | |
| ATCAGAACCGTGGACTCTGA+AGG | - | chr4.4:37039313-37039332 | None:intergenic | 50.0% | |
| ATGGGAATCAACGGCGCTAA+AGG | + | chr4.4:37039447-37039466 | MS.gene23357:CDS | 50.0% | |
| CCTACTCAAGCGAAGAAGCT+GGG | + | chr4.4:37040783-37040802 | MS.gene23357:CDS | 50.0% | |
| CGTCTCTGGCAGTACTTACT+AGG | + | chr4.4:37037363-37037382 | MS.gene23357:intron | 50.0% | |
| CTCAAGGCTGTTCTTGGTGA+AGG | + | chr4.4:37040637-37040656 | MS.gene23357:CDS | 50.0% | |
| GCGCCGTTTGCGTCTTAATT+TGG | + | chr4.4:37039959-37039978 | MS.gene23357:intron | 50.0% | |
| GGCCAATGGAGATGTTAGAG+TGG | + | chr4.4:37039468-37039487 | MS.gene23357:CDS | 50.0% | |
| GGTACCTGACTTTGCACTCA+AGG | + | chr4.4:37040621-37040640 | MS.gene23357:CDS | 50.0% | |
| TCCAGGAGTCAAGATTGCTG+GGG | + | chr4.4:37038212-37038231 | MS.gene23357:CDS | 50.0% | |
| TCCTACTCAAGCGAAGAAGC+TGG | + | chr4.4:37040782-37040801 | MS.gene23357:CDS | 50.0% | |
| TGAAGACTTACGGCCATGTG+CGG | + | chr4.4:37040272-37040291 | MS.gene23357:intron | 50.0% | |
| TTGGTGCAAAAGCTGCAAGC+AGG | + | chr4.4:37037331-37037350 | MS.gene23357:CDS | 50.0% | |
| TTGGTTAGTGCAACAGCCGT+TGG | + | chr4.4:37038705-37038724 | MS.gene23357:CDS | 50.0% | |
| ! | TAAGTACTGCCAGAGACGGA+GGG | - | chr4.4:37037361-37037380 | None:intergenic | 50.0% |
| !! | ATGTTTTGGGTCGTCCCTCA+TGG | + | chr4.4:37040593-37040612 | MS.gene23357:CDS | 50.0% |
| !! | CATGGGCTAGATTAGACGAC+AGG | - | chr4.4:37040195-37040214 | None:intergenic | 50.0% |
| !! | GGTAAAGATGGTGGAGCACT+AGG | + | chr4.4:37039517-37039536 | MS.gene23357:CDS | 50.0% |
| !! | GTGAAGGTGCTACTGTGGTA+AGG | + | chr4.4:37040653-37040672 | MS.gene23357:intron | 50.0% |
| !! | TCTTGGTGAAGGTGCTACTG+TGG | + | chr4.4:37040648-37040667 | MS.gene23357:CDS | 50.0% |
| CCCAGCTTCTTCGCTTGAGT+AGG | - | chr4.4:37040786-37040805 | None:intergenic | 55.0% | |
| TCAACGGCGCTAAAGGCCAA+TGG | + | chr4.4:37039454-37039473 | MS.gene23357:CDS | 55.0% | |
| TCCCCAGCAATCTTGACTCC+TGG | - | chr4.4:37038216-37038235 | None:intergenic | 55.0% | |
| ! | GTAAGTACTGCCAGAGACGG+AGG | - | chr4.4:37037362-37037381 | None:intergenic | 55.0% |
| ACCAGGCACCAGTGAGACAC+AGG | + | chr4.4:37038925-37038944 | MS.gene23357:intron | 60.0% | |
| ACCTGTGTCTCACTGGTGCC+TGG | - | chr4.4:37038929-37038948 | None:intergenic | 60.0% | |
| ATGTTTGCCGGCGGACCTCT+AGG | + | chr4.4:37039699-37039718 | MS.gene23357:CDS | 60.0% | |
| TCCAGATCCTAGAGGTCCGC+CGG | - | chr4.4:37039709-37039728 | None:intergenic | 60.0% | |
| !! | TCAGGTACCGGCAGCCATGA+GGG | - | chr4.4:37040610-37040629 | None:intergenic | 60.0% |
| ! | GCAGGTTAGCCCTCCGTCTC+TGG | + | chr4.4:37037349-37037368 | MS.gene23357:intron | 65.0% |
| !! | GTCAGGTACCGGCAGCCATG+AGG | - | chr4.4:37040611-37040630 | None:intergenic | 65.0% |
| GGGTCGTCCCTCATGGCTGC+CGG | + | chr4.4:37040600-37040619 | MS.gene23357:CDS | 70.0% | |
| !! | GCCGGCGGACCTCTAGGATC+TGG | + | chr4.4:37039705-37039724 | MS.gene23357:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37037286 | 37040860 | 37037286 | ID=MS.gene23357 |
| chr4.4 | mRNA | 37037286 | 37040860 | 37037286 | ID=MS.gene23357.t1;Parent=MS.gene23357 |
| chr4.4 | exon | 37037286 | 37037352 | 37037286 | ID=MS.gene23357.t1.exon1;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37037286 | 37037352 | 37037286 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37037739 | 37037798 | 37037739 | ID=MS.gene23357.t1.exon2;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37037739 | 37037798 | 37037739 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37038202 | 37038320 | 37038202 | ID=MS.gene23357.t1.exon3;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37038202 | 37038320 | 37038202 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37038476 | 37038520 | 37038476 | ID=MS.gene23357.t1.exon4;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37038476 | 37038520 | 37038476 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37038657 | 37038735 | 37038657 | ID=MS.gene23357.t1.exon5;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37038657 | 37038735 | 37038657 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37038930 | 37038991 | 37038930 | ID=MS.gene23357.t1.exon6;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37038930 | 37038991 | 37038930 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37039436 | 37039538 | 37039436 | ID=MS.gene23357.t1.exon7;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37039436 | 37039538 | 37039436 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37039676 | 37039736 | 37039676 | ID=MS.gene23357.t1.exon8;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37039676 | 37039736 | 37039676 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37040022 | 37040092 | 37040022 | ID=MS.gene23357.t1.exon9;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37040022 | 37040092 | 37040022 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37040530 | 37040669 | 37040530 | ID=MS.gene23357.t1.exon10;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37040530 | 37040669 | 37040530 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| chr4.4 | exon | 37040759 | 37040860 | 37040759 | ID=MS.gene23357.t1.exon11;Parent=MS.gene23357.t1 |
| chr4.4 | CDS | 37040759 | 37040860 | 37040759 | ID=cds.MS.gene23357.t1;Parent=MS.gene23357.t1 |
| Gene Sequence |
| Protein sequence |
