Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41713.t1 | XP_003624612.1 | 93.5 | 93 | 6 | 0 | 25 | 117 | 181 | 273 | 7.40E-44 | 186.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41713.t1 | A2Q5Q1 | 93.5 | 93 | 6 | 0 | 25 | 117 | 181 | 273 | 5.4e-44 | 186.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene41713 | 0.812248 | 4.66E-51 | -1.69E-46 |
| MS.gene049150 | MS.gene41713 | 0.812635 | 3.84E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene41713 | 0.816081 | 6.65E-52 | -1.69E-46 |
| MS.gene049170 | MS.gene41713 | 0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene41713 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene049488 | MS.gene41713 | 0.819445 | 1.16E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene41713 | 0.809798 | 1.58E-50 | -1.69E-46 |
| MS.gene049993 | MS.gene41713 | 0.847235 | 1.31E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene41713 | 0.846444 | 2.16E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene41713 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene41713 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene050400 | MS.gene41713 | 0.845962 | 2.93E-59 | -1.69E-46 |
| MS.gene050406 | MS.gene41713 | 0.824277 | 8.81E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene41713 | -0.886807 | 2.48E-72 | -1.69E-46 |
| MS.gene050464 | MS.gene41713 | 0.838462 | 2.84E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene41713 | 0.826444 | 2.70E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene41713 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene41713 | 0.889767 | 1.80E-73 | -1.69E-46 |
| MS.gene050971 | MS.gene41713 | 0.831815 | 1.35E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene41713 | 0.843562 | 1.30E-58 | -1.69E-46 |
| MS.gene051521 | MS.gene41713 | 0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene41713 | 0.903192 | 4.47E-79 | -1.69E-46 |
| MS.gene051582 | MS.gene41713 | 0.835226 | 1.90E-56 | -1.69E-46 |
| MS.gene051588 | MS.gene41713 | 0.824991 | 5.98E-54 | -1.69E-46 |
| MS.gene051605 | MS.gene41713 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene41713 | 0.823407 | 1.41E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene41713 | 0.831826 | 1.34E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene41713 | -0.89507 | 1.36E-75 | -1.69E-46 |
| MS.gene052077 | MS.gene41713 | 0.86687 | 2.08E-65 | -1.69E-46 |
| MS.gene052128 | MS.gene41713 | -0.817926 | 2.56E-52 | -1.69E-46 |
| MS.gene052134 | MS.gene41713 | 0.847107 | 1.43E-59 | -1.69E-46 |
| MS.gene052135 | MS.gene41713 | 0.855636 | 5.52E-62 | -1.69E-46 |
| MS.gene052136 | MS.gene41713 | 0.823473 | 1.36E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene41713 | 0.864082 | 1.57E-64 | -1.69E-46 |
| MS.gene052253 | MS.gene41713 | 0.884581 | 1.70E-71 | -1.69E-46 |
| MS.gene052310 | MS.gene41713 | 0.822051 | 2.91E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene41713 | 0.854281 | 1.37E-61 | -1.69E-46 |
| MS.gene052346 | MS.gene41713 | 0.808433 | 3.10E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene41713 | 0.847855 | 8.88E-60 | -1.69E-46 |
| MS.gene052421 | MS.gene41713 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene41713 | 0.845614 | 3.64E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene41713 | 0.824181 | 9.28E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene41713 | 0.816708 | 4.81E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene41713 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene41713 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene052590 | MS.gene41713 | 0.800305 | 1.53E-48 | -1.69E-46 |
| MS.gene052758 | MS.gene41713 | 0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene41713 | 0.832143 | 1.12E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene41713 | 0.828981 | 6.64E-55 | -1.69E-46 |
| MS.gene053176 | MS.gene41713 | 0.80573 | 1.16E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene41713 | 0.8023 | 5.99E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene41713 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene41713 | 0.813973 | 1.95E-51 | -1.69E-46 |
| MS.gene053758 | MS.gene41713 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene41713 | 0.819519 | 1.11E-52 | -1.69E-46 |
| MS.gene053873 | MS.gene41713 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene41713 | 0.81106 | 8.45E-51 | -1.69E-46 |
| MS.gene053928 | MS.gene41713 | 0.824873 | 6.38E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene41713 | 0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene41713 | 0.84341 | 1.43E-58 | -1.69E-46 |
| MS.gene054108 | MS.gene41713 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene054110 | MS.gene41713 | 0.82247 | 2.33E-53 | -1.69E-46 |
| MS.gene05413 | MS.gene41713 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene41713 | 0.88973 | 1.86E-73 | -1.69E-46 |
| MS.gene054349 | MS.gene41713 | 0.873171 | 1.81E-67 | -1.69E-46 |
| MS.gene054548 | MS.gene41713 | 0.804369 | 2.23E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene41713 | 0.85668 | 2.73E-62 | -1.69E-46 |
| MS.gene054719 | MS.gene41713 | 0.867194 | 1.64E-65 | -1.69E-46 |
| MS.gene054742 | MS.gene41713 | -0.810214 | 1.29E-50 | -1.69E-46 |
| MS.gene054917 | MS.gene41713 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene41713 | 0.829698 | 4.45E-55 | -1.69E-46 |
| MS.gene054920 | MS.gene41713 | 0.82175 | 3.42E-53 | -1.69E-46 |
| MS.gene054983 | MS.gene41713 | 0.80727 | 5.49E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene41713 | 0.880651 | 4.61E-70 | -1.69E-46 |
| MS.gene055217 | MS.gene41713 | 0.807241 | 5.57E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene41713 | 0.8636 | 2.22E-64 | -1.69E-46 |
| MS.gene055539 | MS.gene41713 | 0.858818 | 6.35E-63 | -1.69E-46 |
| MS.gene05553 | MS.gene41713 | 0.89223 | 1.92E-74 | -1.69E-46 |
| MS.gene05556 | MS.gene41713 | 0.840143 | 1.04E-57 | -1.69E-46 |
| MS.gene055601 | MS.gene41713 | -0.809323 | 2.00E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene41713 | 0.817355 | 3.44E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene41713 | 0.85532 | 6.83E-62 | -1.69E-46 |
| MS.gene055744 | MS.gene41713 | 0.867529 | 1.28E-65 | -1.69E-46 |
| MS.gene05594 | MS.gene41713 | 0.805608 | 1.23E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene41713 | 0.800858 | 1.18E-48 | -1.69E-46 |
| MS.gene056233 | MS.gene41713 | 0.826245 | 3.01E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene41713 | 0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene41713 | 0.82646 | 2.68E-54 | -1.69E-46 |
| MS.gene056514 | MS.gene41713 | 0.873903 | 1.02E-67 | -1.69E-46 |
| MS.gene056659 | MS.gene41713 | 0.863109 | 3.15E-64 | -1.69E-46 |
| MS.gene056723 | MS.gene41713 | 0.842761 | 2.12E-58 | -1.69E-46 |
| MS.gene056782 | MS.gene41713 | 0.806032 | 1.00E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene41713 | -0.852778 | 3.69E-61 | -1.69E-46 |
| MS.gene056979 | MS.gene41713 | 0.831303 | 1.80E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene41713 | 0.831742 | 1.40E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene41713 | 0.849898 | 2.41E-60 | -1.69E-46 |
| MS.gene057396 | MS.gene41713 | 0.86188 | 7.52E-64 | -1.69E-46 |
| MS.gene057476 | MS.gene41713 | 0.83209 | 1.15E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene41713 | 0.855075 | 8.04E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene41713 | 0.848422 | 6.19E-60 | -1.69E-46 |
| MS.gene057825 | MS.gene41713 | 0.861832 | 7.77E-64 | -1.69E-46 |
| MS.gene057888 | MS.gene41713 | 0.833194 | 6.13E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene41713 | 0.819859 | 9.31E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene41713 | 0.843668 | 1.22E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene41713 | 0.806158 | 9.42E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene41713 | 0.849008 | 4.26E-60 | -1.69E-46 |
| MS.gene058233 | MS.gene41713 | 0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene41713 | 0.822336 | 2.50E-53 | -1.69E-46 |
| MS.gene058376 | MS.gene41713 | 0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene41713 | 0.854427 | 1.24E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene41713 | 0.866709 | 2.34E-65 | -1.69E-46 |
| MS.gene058710 | MS.gene41713 | 0.827961 | 1.17E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene41713 | 0.864764 | 9.62E-65 | -1.69E-46 |
| MS.gene058928 | MS.gene41713 | 0.839019 | 2.04E-57 | -1.69E-46 |
| MS.gene058948 | MS.gene41713 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene41713 | 0.804823 | 1.80E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene41713 | 0.868879 | 4.70E-66 | -1.69E-46 |
| MS.gene05907 | MS.gene41713 | 0.839123 | 1.91E-57 | -1.69E-46 |
| MS.gene059082 | MS.gene41713 | 0.842588 | 2.36E-58 | -1.69E-46 |
| MS.gene059141 | MS.gene41713 | 0.827532 | 1.49E-54 | -1.69E-46 |
| MS.gene059247 | MS.gene41713 | 0.808883 | 2.49E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene41713 | 0.85517 | 7.55E-62 | -1.69E-46 |
| MS.gene059294 | MS.gene41713 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene41713 | 0.808582 | 2.89E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene41713 | 0.89664 | 3.04E-76 | -1.69E-46 |
| MS.gene059462 | MS.gene41713 | 0.841358 | 4.99E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene41713 | 0.843371 | 1.46E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene41713 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene41713 | 0.836269 | 1.03E-56 | -1.69E-46 |
| MS.gene059807 | MS.gene41713 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene41713 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene059868 | MS.gene41713 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene41713 | 0.817061 | 4.01E-52 | -1.69E-46 |
| MS.gene060038 | MS.gene41713 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene41713 | 0.838684 | 2.48E-57 | -1.69E-46 |
| MS.gene060372 | MS.gene41713 | 0.815054 | 1.13E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene41713 | 0.848956 | 4.40E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene41713 | 0.851221 | 1.02E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene41713 | -0.818302 | 2.10E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene41713 | 0.880685 | 4.48E-70 | -1.69E-46 |
| MS.gene061159 | MS.gene41713 | 0.847684 | 9.90E-60 | -1.69E-46 |
| MS.gene061214 | MS.gene41713 | 0.815654 | 8.28E-52 | -1.69E-46 |
| MS.gene061215 | MS.gene41713 | 0.814089 | 1.84E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41713.t1 | MTR_7g085420 | 93.548 | 93 | 6 | 0 | 25 | 117 | 181 | 273 | 2.00e-61 | 189 |
| MS.gene41713.t1 | MTR_7g085420 | 89.655 | 29 | 3 | 0 | 25 | 53 | 181 | 209 | 5.84e-14 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41713.t1 | AT2G23840 | 63.810 | 105 | 30 | 1 | 11 | 115 | 182 | 278 | 2.38e-46 | 150 |
Find 23 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGTTCTGACCGCGAAAA+AGG | 0.223811 | 7.2:+22302167 | MS.gene41713:CDS |
| CTTAGAGCTGCTGCTGTTAG+AGG | 0.315554 | 7.2:-22302147 | None:intergenic |
| TCCTTTCTTTGAGTTGCATC+TGG | 0.332427 | 7.2:-22301823 | None:intergenic |
| GCAAGAATGTCATAGTCCTT+TGG | 0.416406 | 7.2:-22302120 | None:intergenic |
| CATTGTCCACCCACTGCAGC+TGG | 0.438963 | 7.2:-22299735 | None:intergenic |
| GAAAGGACGAAAGTCCTTAG+AGG | 0.463003 | 7.2:+22301839 | MS.gene41713:CDS |
| AGATACTGACGCCATTCATC+AGG | 0.493348 | 7.2:-22302195 | None:intergenic |
| TCACGTTGTGCCAGCTGCAG+TGG | 0.517496 | 7.2:+22299725 | MS.gene41713:CDS |
| AAAAGGGCACACCTGATGAA+TGG | 0.523171 | 7.2:+22302184 | MS.gene41713:CDS |
| AGCTGCTGCTGTTAGAGGTA+TGG | 0.524385 | 7.2:-22302142 | None:intergenic |
| AACTCTCAGTCACATTCATC+CGG | 0.528952 | 7.2:+22299049 | MS.gene41713:CDS |
| CAGTGGGTGGACAATGGACA+TGG | 0.531472 | 7.2:+22299742 | MS.gene41713:CDS |
| GACTAACCCATGGTTCTAAG+AGG | 0.532292 | 7.2:-22302223 | None:intergenic |
| TCCAGATGCAACTCAAAGAA+AGG | 0.539778 | 7.2:+22301822 | MS.gene41713:CDS |
| CACGTTGTGCCAGCTGCAGT+GGG | 0.556043 | 7.2:+22299726 | MS.gene41713:CDS |
| AGCTGGCACAACGTGATCGA+TGG | 0.589820 | 7.2:-22299718 | None:intergenic |
| TGACTGAGAGTTCTTTACAC+TGG | 0.598840 | 7.2:-22299038 | None:intergenic |
| TCTTGTTATTCAGAAACCAA+AGG | 0.601581 | 7.2:+22302104 | MS.gene41713:intron |
| GTACAATGAAGTATCTTCGA+AGG | 0.608014 | 7.2:+22299008 | MS.gene41713:CDS |
| CAGCTGCAGTGGGTGGACAA+TGG | 0.613401 | 7.2:+22299736 | MS.gene41713:CDS |
| GAAGTTGATTAAGGTCCCAA+AGG | 0.616973 | 7.2:+22301872 | MS.gene41713:CDS |
| GTTGTGCCAGCTGCAGTGGG+TGG | 0.629063 | 7.2:+22299729 | MS.gene41713:CDS |
| AGTGGGTGGACAATGGACAT+GGG | 0.715330 | 7.2:+22299743 | MS.gene41713:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTCTATTAGTTTTTTTT+TGG | - | chr7.2:22299388-22299407 | None:intergenic | 10.0% |
| !! | AAAAACTAATAGAATAAAAC+TGG | + | chr7.2:22299391-22299410 | MS.gene41713:intron | 15.0% |
| !! | TAATTAGTTAAATAGATACT+GGG | + | chr7.2:22300076-22300095 | MS.gene41713:intron | 15.0% |
| !! | TAGTTATTAAATGGTAATTA+AGG | - | chr7.2:22301731-22301750 | None:intergenic | 15.0% |
| !! | TTAATTAGTTAAATAGATAC+TGG | + | chr7.2:22300075-22300094 | MS.gene41713:intron | 15.0% |
| !!! | CCATTCATTTTTAATATAAA+AGG | + | chr7.2:22300928-22300947 | MS.gene41713:intron | 15.0% |
| !!! | CCTTTTATATTAAAAATGAA+TGG | - | chr7.2:22300931-22300950 | None:intergenic | 15.0% |
| !!! | CTTTTAATGTAATTAAAACT+TGG | - | chr7.2:22302005-22302024 | None:intergenic | 15.0% |
| !!! | TAATCTGTAATGATATTTTT+TGG | + | chr7.2:22301782-22301801 | MS.gene41713:intron | 15.0% |
| !!! | TTCATACTAAATTTTACAAA+AGG | - | chr7.2:22299834-22299853 | None:intergenic | 15.0% |
| !! | AAAATCATCAGGTTTAAAAA+TGG | + | chr7.2:22300384-22300403 | MS.gene41713:intron | 20.0% |
| !! | AATTAGTTAAATAGATACTG+GGG | + | chr7.2:22300077-22300096 | MS.gene41713:intron | 20.0% |
| !! | AGAAAATAATCAATTCTGTT+AGG | + | chr7.2:22299994-22300013 | MS.gene41713:intron | 20.0% |
| !! | ATAACAATGTAATATTGAGA+AGG | - | chr7.2:22299496-22299515 | None:intergenic | 20.0% |
| !! | ATTAAATGGTAATTAAGGTA+GGG | - | chr7.2:22301726-22301745 | None:intergenic | 20.0% |
| !! | CAAAAAATATTCTAATGCAA+TGG | + | chr7.2:22299587-22299606 | MS.gene41713:intron | 20.0% |
| !! | CATTGAATAATTTATGTATG+TGG | + | chr7.2:22300799-22300818 | MS.gene41713:intron | 20.0% |
| !! | TAACAATGTAATATTGAGAA+GGG | - | chr7.2:22299495-22299514 | None:intergenic | 20.0% |
| !! | TATTAAATGGTAATTAAGGT+AGG | - | chr7.2:22301727-22301746 | None:intergenic | 20.0% |
| !! | TATTGAATAATTGATGTATC+TGG | - | chr7.2:22300838-22300857 | None:intergenic | 20.0% |
| !! | TTACTATTTGTTCTTGATTT+AGG | - | chr7.2:22300621-22300640 | None:intergenic | 20.0% |
| !!! | AAGAGAATATTTCTACTTTT+GGG | - | chr7.2:22301597-22301616 | None:intergenic | 20.0% |
| !!! | ATACTAAATTTTACAAAAGG+AGG | - | chr7.2:22299831-22299850 | None:intergenic | 20.0% |
| !!! | ATTGCAGATTAGTTATTAAA+TGG | - | chr7.2:22301740-22301759 | None:intergenic | 20.0% |
| !!! | ATTTGATTAGTTGTTTTGAA+AGG | + | chr7.2:22300129-22300148 | MS.gene41713:intron | 20.0% |
| !!! | ATTTTCTATTTCAATTTCTC+CGG | + | chr7.2:22300227-22300246 | MS.gene41713:intron | 20.0% |
| !!! | ATTTTTAATATAAAAGGACC+TGG | + | chr7.2:22300934-22300953 | MS.gene41713:intron | 20.0% |
| !!! | CTTCTTTTTCATAAAGTAAA+CGG | + | chr7.2:22301492-22301511 | MS.gene41713:intron | 20.0% |
| !!! | GTCAATTGTTACTTATATAT+AGG | + | chr7.2:22300868-22300887 | MS.gene41713:intron | 20.0% |
| !!! | GTTAATTGTTTCTTGTAAAA+AGG | - | chr7.2:22300769-22300788 | None:intergenic | 20.0% |
| !!! | TAAGAGAATATTTCTACTTT+TGG | - | chr7.2:22301598-22301617 | None:intergenic | 20.0% |
| !!! | TTAGATTATAAGTTGATCAT+AGG | + | chr7.2:22300685-22300704 | MS.gene41713:intron | 20.0% |
| !!! | TTTGGTAATTTTGAAAACTT+TGG | - | chr7.2:22299370-22299389 | None:intergenic | 20.0% |
| ! | AAAACTGGAAGAGAATTATA+AGG | + | chr7.2:22301048-22301067 | MS.gene41713:intron | 25.0% |
| ! | AAACTTGGAATTCTTAACAT+TGG | - | chr7.2:22301990-22302009 | None:intergenic | 25.0% |
| ! | AACAATGTAATATTGAGAAG+GGG | - | chr7.2:22299494-22299513 | None:intergenic | 25.0% |
| ! | AACCATGAATATGCTAAAAT+AGG | - | chr7.2:22302046-22302065 | None:intergenic | 25.0% |
| ! | AATATAAGAAAATACTCCTC+TGG | - | chr7.2:22300895-22300914 | None:intergenic | 25.0% |
| ! | AGAAATCAGTTAGAAAGTTA+AGG | - | chr7.2:22301520-22301539 | None:intergenic | 25.0% |
| ! | AGTAATTAGAAAACTTTGAG+CGG | + | chr7.2:22300034-22300053 | MS.gene41713:intron | 25.0% |
| ! | ATTGCAATACAGTTTAAACT+TGG | - | chr7.2:22300324-22300343 | None:intergenic | 25.0% |
| ! | CGTATCTTAGATTATTTCAT+AGG | - | chr7.2:22300664-22300683 | None:intergenic | 25.0% |
| ! | GAAATAATTTGAAAGTAACC+CGG | - | chr7.2:22300249-22300268 | None:intergenic | 25.0% |
| ! | GATGACAAAATAAGAATGAA+AGG | + | chr7.2:22300973-22300992 | MS.gene41713:intron | 25.0% |
| ! | TACTCTATTTGATATTGTTC+AGG | - | chr7.2:22299141-22299160 | None:intergenic | 25.0% |
| ! | TTTACGACATTCATGAAAAT+TGG | + | chr7.2:22299270-22299289 | MS.gene41713:intron | 25.0% |
| !! | AGCAAAAATGAAGTTGATTA+AGG | + | chr7.2:22301863-22301882 | MS.gene41713:CDS | 25.0% |
| !! | ATTTTCATGAATGTCGTAAA+TGG | - | chr7.2:22299270-22299289 | None:intergenic | 25.0% |
| !! | GTGAGATTTTAGATAAAAAG+AGG | + | chr7.2:22300491-22300510 | MS.gene41713:intron | 25.0% |
| !! | TTTTCTATTTCAATTTCTCC+GGG | + | chr7.2:22300228-22300247 | MS.gene41713:intron | 25.0% |
| !!! | GATTTCTAGTTTACCTTAAT+GGG | + | chr7.2:22301533-22301552 | MS.gene41713:intron | 25.0% |
| !!! | GTAATGATATTTTTTGGTAC+AGG | + | chr7.2:22301788-22301807 | MS.gene41713:intron | 25.0% |
| !!! | TACCTATTTTAGCATATTCA+TGG | + | chr7.2:22302041-22302060 | MS.gene41713:intron | 25.0% |
| !!! | TCAGTTTTGTATCAAATGAA+AGG | - | chr7.2:22299932-22299951 | None:intergenic | 25.0% |
| !!! | TGATTTCTAGTTTACCTTAA+TGG | + | chr7.2:22301532-22301551 | MS.gene41713:intron | 25.0% |
| ACTATTGAAGTGAATCATTG+TGG | + | chr7.2:22301296-22301315 | MS.gene41713:intron | 30.0% | |
| AGAAATGATATATTCGTGCT+AGG | - | chr7.2:22299430-22299449 | None:intergenic | 30.0% | |
| AGAGCAATACCTGTTATATT+CGG | - | chr7.2:22299682-22299701 | None:intergenic | 30.0% | |
| ATATTATGAGATACTACCTC+CGG | + | chr7.2:22300742-22300761 | MS.gene41713:intron | 30.0% | |
| TAGTTGAGAACTGTGTATAA+TGG | + | chr7.2:22299451-22299470 | MS.gene41713:intron | 30.0% | |
| TATGATGCCTTAGCATAAAA+AGG | + | chr7.2:22301936-22301955 | MS.gene41713:intron | 30.0% | |
| TCAACAATAACTACAGTTCT+TGG | - | chr7.2:22300467-22300486 | None:intergenic | 30.0% | |
| TCTATGAATCTCTCTAAGTA+GGG | - | chr7.2:22300592-22300611 | None:intergenic | 30.0% | |
| TTACTTATATATAGGACCAG+AGG | + | chr7.2:22300876-22300895 | MS.gene41713:intron | 30.0% | |
| TTCAATCTCTACTAACTCAA+TGG | - | chr7.2:22299632-22299651 | None:intergenic | 30.0% | |
| TTTGATTGCGAAAAGGAAAT+TGG | - | chr7.2:22300424-22300443 | None:intergenic | 30.0% | |
| ! | AAGGAAATTGGTTTCTTAGA+TGG | - | chr7.2:22300412-22300431 | None:intergenic | 30.0% |
| ! | ATTGTTGCCTTTTTATGCTA+AGG | - | chr7.2:22301946-22301965 | None:intergenic | 30.0% |
| ! | GAATCATTGTGTGCAAATTT+TGG | - | chr7.2:22301404-22301423 | None:intergenic | 30.0% |
| ! | TTGTTTCTTGTAAAAAGGAC+CGG | - | chr7.2:22300764-22300783 | None:intergenic | 30.0% |
| !! | AATTACTTTTGCGTCATCTT+TGG | - | chr7.2:22300021-22300040 | None:intergenic | 30.0% |
| !! | GTTAAGATGAAAGTACCTTT+GGG | - | chr7.2:22301890-22301909 | None:intergenic | 30.0% |
| !! | GTTAATTTTAAAAGCTCGCA+AGG | - | chr7.2:22301447-22301466 | None:intergenic | 30.0% |
| !! | TCTTGTTATTCAGAAACCAA+AGG | + | chr7.2:22302104-22302123 | MS.gene41713:intron | 30.0% |
| !! | TGTTAAGATGAAAGTACCTT+TGG | - | chr7.2:22301891-22301910 | None:intergenic | 30.0% |
| !!! | TTTTAACTTTCTGTCACCAA+TGG | - | chr7.2:22301032-22301051 | None:intergenic | 30.0% |
| AAACTGATACAGTTTCAGCT+TGG | + | chr7.2:22299945-22299964 | MS.gene41713:intron | 35.0% | |
| AAATAGATACTGGGGAACAT+GGG | + | chr7.2:22300085-22300104 | MS.gene41713:intron | 35.0% | |
| AACAATATAGCTACCAAGGA+AGG | + | chr7.2:22301960-22301979 | MS.gene41713:intron | 35.0% | |
| ACAATATAGCTACCAAGGAA+GGG | + | chr7.2:22301961-22301980 | MS.gene41713:intron | 35.0% | |
| AGTCGAACATCAAAATCATC+AGG | + | chr7.2:22300373-22300392 | MS.gene41713:intron | 35.0% | |
| ATGATATATTCGTGCTAGGT+AGG | - | chr7.2:22299426-22299445 | None:intergenic | 35.0% | |
| ATGGTAATTAAGGTAGGGAA+AGG | - | chr7.2:22301721-22301740 | None:intergenic | 35.0% | |
| CAAGTTAATGAGTCAAAAGC+AGG | - | chr7.2:22301690-22301709 | None:intergenic | 35.0% | |
| CAATACCTGTTATATTCGGA+AGG | - | chr7.2:22299678-22299697 | None:intergenic | 35.0% | |
| CACATGATAAAACAGCTAGA+CGG | - | chr7.2:22299898-22299917 | None:intergenic | 35.0% | |
| GATTACCTTCCGAATATAAC+AGG | + | chr7.2:22299670-22299689 | MS.gene41713:intron | 35.0% | |
| GCAACATTCATTATTCTTCG+AGG | + | chr7.2:22299101-22299120 | MS.gene41713:intron | 35.0% | |
| GTCTATGAATCTCTCTAAGT+AGG | - | chr7.2:22300593-22300612 | None:intergenic | 35.0% | |
| TAAATAGATACTGGGGAACA+TGG | + | chr7.2:22300084-22300103 | MS.gene41713:intron | 35.0% | |
| TGGAATTGAACATCAACCAT+TGG | + | chr7.2:22301013-22301032 | MS.gene41713:intron | 35.0% | |
| TGGTAATTAAGGTAGGGAAA+GGG | - | chr7.2:22301720-22301739 | None:intergenic | 35.0% | |
| TGGTGACAGAAAGTTAAAAC+TGG | + | chr7.2:22301033-22301052 | MS.gene41713:intron | 35.0% | |
| TTGCTAGTGAGATGAGAAAT+AGG | + | chr7.2:22301087-22301106 | MS.gene41713:intron | 35.0% | |
| ! | AACATTTTCAGCAACCCAAT+AGG | - | chr7.2:22300288-22300307 | None:intergenic | 35.0% |
| ! | ACCTGGTTCAAGTTATTAGT+GGG | + | chr7.2:22300951-22300970 | MS.gene41713:intron | 35.0% |
| ! | GTACAATGAAGTATCTTCGA+AGG | + | chr7.2:22299008-22299027 | MS.gene41713:CDS | 35.0% |
| ! | TTATTTCTTGAGCTGTTGTG+TGG | + | chr7.2:22300262-22300281 | MS.gene41713:intron | 35.0% |
| !! | AGTTGACTTTTTGTTCGTGT+GGG | - | chr7.2:22299081-22299100 | None:intergenic | 35.0% |
| !! | CTTCATTTTTGCTTCCTCTA+AGG | - | chr7.2:22301856-22301875 | None:intergenic | 35.0% |
| AACTCTCAGTCACATTCATC+CGG | + | chr7.2:22299049-22299068 | MS.gene41713:CDS | 40.0% | |
| AATAGATACTGGGGAACATG+GGG | + | chr7.2:22300086-22300105 | MS.gene41713:intron | 40.0% | |
| AGGACATGATACATCATCGA+TGG | + | chr7.2:22300993-22301012 | MS.gene41713:intron | 40.0% | |
| AGGCAACAATATAGCTACCA+AGG | + | chr7.2:22301956-22301975 | MS.gene41713:intron | 40.0% | |
| ATTAAGGTAGGGAAAGGGTA+AGG | - | chr7.2:22301715-22301734 | None:intergenic | 40.0% | |
| CAAGTTAGCATGACCCATTA+AGG | - | chr7.2:22301549-22301568 | None:intergenic | 40.0% | |
| CTAGAGATGTGATGCATTTC+TGG | + | chr7.2:22301341-22301360 | MS.gene41713:intron | 40.0% | |
| GAATCTCTCTAAGTAGGGAT+TGG | - | chr7.2:22300587-22300606 | None:intergenic | 40.0% | |
| GCAAGAATGTCATAGTCCTT+TGG | - | chr7.2:22302123-22302142 | None:intergenic | 40.0% | |
| GGTAATCTCTTGTCAATGCA+AGG | - | chr7.2:22299657-22299676 | None:intergenic | 40.0% | |
| TCCAGATGCAACTCAAAGAA+AGG | + | chr7.2:22301822-22301841 | MS.gene41713:CDS | 40.0% | |
| TCCCACTAATAACTTGAACC+AGG | - | chr7.2:22300955-22300974 | None:intergenic | 40.0% | |
| TGACTGAGAGTTCTTTACAC+TGG | - | chr7.2:22299041-22299060 | None:intergenic | 40.0% | |
| TTGCTTGATATGTGCCCTTA+GGG | - | chr7.2:22301574-22301593 | None:intergenic | 40.0% | |
| TTTCTTGTAAAAAGGACCGG+AGG | - | chr7.2:22300761-22300780 | None:intergenic | 40.0% | |
| ! | GAAGTTGATTAAGGTCCCAA+AGG | + | chr7.2:22301872-22301891 | MS.gene41713:CDS | 40.0% |
| ! | GACCTGGTTCAAGTTATTAG+TGG | + | chr7.2:22300950-22300969 | MS.gene41713:intron | 40.0% |
| !! | CAGTTGACTTTTTGTTCGTG+TGG | - | chr7.2:22299082-22299101 | None:intergenic | 40.0% |
| !! | GTTGACTTTTTGTTCGTGTG+GGG | - | chr7.2:22299080-22299099 | None:intergenic | 40.0% |
| !! | TCCTTTCTTTGAGTTGCATC+TGG | - | chr7.2:22301826-22301845 | None:intergenic | 40.0% |
| !! | TTGTGGCTTTGATTGCGAAA+AGG | - | chr7.2:22300431-22300450 | None:intergenic | 40.0% |
| AGATACTGACGCCATTCATC+AGG | - | chr7.2:22302198-22302217 | None:intergenic | 45.0% | |
| ATAGATACTGGGGAACATGG+GGG | + | chr7.2:22300087-22300106 | MS.gene41713:intron | 45.0% | |
| GAAAGGACGAAAGTCCTTAG+AGG | + | chr7.2:22301839-22301858 | MS.gene41713:CDS | 45.0% | |
| GTCGTAAATGGTATCTGTGC+TGG | - | chr7.2:22299258-22299277 | None:intergenic | 45.0% | |
| GTTGCTTGATATGTGCCCTT+AGG | - | chr7.2:22301575-22301594 | None:intergenic | 45.0% | |
| TAACATTGGCAACCCTTCCT+TGG | - | chr7.2:22301976-22301995 | None:intergenic | 45.0% | |
| ! | AAAAGGGCACACCTGATGAA+TGG | + | chr7.2:22302184-22302203 | MS.gene41713:CDS | 45.0% |
| ! | AAGAGTTCTGACCGCGAAAA+AGG | + | chr7.2:22302167-22302186 | MS.gene41713:CDS | 45.0% |
| ! | AGAGTTCTGACCGCGAAAAA+GGG | + | chr7.2:22302168-22302187 | MS.gene41713:CDS | 45.0% |
| ! | ATGGTATCTGTGCTGGTAGT+TGG | - | chr7.2:22299251-22299270 | None:intergenic | 45.0% |
| ! | CATGCTAACTTGTGCCCTAA+GGG | + | chr7.2:22301557-22301576 | MS.gene41713:intron | 45.0% |
| ! | TCATGCTAACTTGTGCCCTA+AGG | + | chr7.2:22301556-22301575 | MS.gene41713:intron | 45.0% |
| AGCTGCTGCTGTTAGAGGTA+TGG | - | chr7.2:22302145-22302164 | None:intergenic | 50.0% | |
| AGTGGGTGGACAATGGACAT+GGG | + | chr7.2:22299743-22299762 | MS.gene41713:CDS | 50.0% | |
| CGCAATCAAAGCCACAAGCA+TGG | + | chr7.2:22300434-22300453 | MS.gene41713:intron | 50.0% | |
| CTTAGAGCTGCTGCTGTTAG+AGG | - | chr7.2:22302150-22302169 | None:intergenic | 50.0% | |
| GAGCTGTTGTGTGGCCTATT+GGG | + | chr7.2:22300271-22300290 | MS.gene41713:intron | 50.0% | |
| TAGATACTGGGGAACATGGG+GGG | + | chr7.2:22300088-22300107 | MS.gene41713:intron | 50.0% | |
| TGAGCTGTTGTGTGGCCTAT+TGG | + | chr7.2:22300270-22300289 | MS.gene41713:intron | 50.0% | |
| TTGTTCGTGTGGGGTTGTAC+CGG | - | chr7.2:22299071-22299090 | None:intergenic | 50.0% | |
| !! | ATCAGGTGTGCCCTTTTTCG+CGG | - | chr7.2:22302181-22302200 | None:intergenic | 50.0% |
| AGCTGGCACAACGTGATCGA+TGG | - | chr7.2:22299721-22299740 | None:intergenic | 55.0% | |
| CAGTGGGTGGACAATGGACA+TGG | + | chr7.2:22299742-22299761 | MS.gene41713:CDS | 55.0% | |
| !! | TTGGTGTCGTGCCATGCTTG+TGG | - | chr7.2:22300448-22300467 | None:intergenic | 55.0% |
| CACGTTGTGCCAGCTGCAGT+GGG | + | chr7.2:22299726-22299745 | MS.gene41713:CDS | 60.0% | |
| CAGCTGCAGTGGGTGGACAA+TGG | + | chr7.2:22299736-22299755 | MS.gene41713:CDS | 60.0% | |
| CATTGTCCACCCACTGCAGC+TGG | - | chr7.2:22299738-22299757 | None:intergenic | 60.0% | |
| TCACGTTGTGCCAGCTGCAG+TGG | + | chr7.2:22299725-22299744 | MS.gene41713:CDS | 60.0% | |
| CTGGGGAACATGGGGGGAGA+AGG | + | chr7.2:22300094-22300113 | MS.gene41713:intron | 65.0% | |
| GTTGTGCCAGCTGCAGTGGG+TGG | + | chr7.2:22299729-22299748 | MS.gene41713:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22298997 | 22302230 | 22298997 | ID=MS.gene41713 |
| chr7.2 | mRNA | 22298997 | 22302230 | 22298997 | ID=MS.gene41713.t1;Parent=MS.gene41713 |
| chr7.2 | exon | 22298997 | 22299070 | 22298997 | ID=MS.gene41713.t1.exon1;Parent=MS.gene41713.t1 |
| chr7.2 | CDS | 22298997 | 22299070 | 22298997 | ID=cds.MS.gene41713.t1;Parent=MS.gene41713.t1 |
| chr7.2 | exon | 22299692 | 22299773 | 22299692 | ID=MS.gene41713.t1.exon2;Parent=MS.gene41713.t1 |
| chr7.2 | CDS | 22299692 | 22299773 | 22299692 | ID=cds.MS.gene41713.t1;Parent=MS.gene41713.t1 |
| chr7.2 | exon | 22301810 | 22301893 | 22301810 | ID=MS.gene41713.t1.exon3;Parent=MS.gene41713.t1 |
| chr7.2 | CDS | 22301810 | 22301893 | 22301810 | ID=cds.MS.gene41713.t1;Parent=MS.gene41713.t1 |
| chr7.2 | exon | 22302117 | 22302230 | 22302117 | ID=MS.gene41713.t1.exon4;Parent=MS.gene41713.t1 |
| chr7.2 | CDS | 22302117 | 22302230 | 22302117 | ID=cds.MS.gene41713.t1;Parent=MS.gene41713.t1 |
| Gene Sequence |
| Protein sequence |
