Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52149.t1 | XP_003607248.1 | 98.2 | 396 | 6 | 1 | 1 | 395 | 1 | 396 | 1.40E-224 | 788.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52149.t1 | O82660 | 84.5 | 348 | 52 | 1 | 50 | 395 | 56 | 403 | 5.6e-177 | 621.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52149.t1 | G7JPH8 | 98.2 | 396 | 6 | 1 | 1 | 395 | 1 | 396 | 1.0e-224 | 788.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene52149 | 0.80569 | 1.18E-49 | -1.69E-46 |
| MS.gene049173 | MS.gene52149 | 0.83861 | 2.60E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene52149 | 0.82094 | 5.26E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene52149 | 0.827487 | 1.52E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene52149 | 0.852023 | 6.06E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene52149 | 0.830843 | 2.34E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene52149 | 0.831056 | 2.07E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene52149 | 0.862746 | 4.07E-64 | -1.69E-46 |
| MS.gene049609 | MS.gene52149 | 0.819619 | 1.06E-52 | -1.69E-46 |
| MS.gene049614 | MS.gene52149 | 0.880334 | 5.98E-70 | -1.69E-46 |
| MS.gene049633 | MS.gene52149 | 0.805033 | 1.62E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene52149 | 0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene52149 | 0.806096 | 9.71E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene52149 | 0.85011 | 2.10E-60 | -1.69E-46 |
| MS.gene050083 | MS.gene52149 | -0.803792 | 2.94E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene52149 | 0.848899 | 4.57E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene52149 | 0.84011 | 1.06E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene52149 | 0.831926 | 1.27E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene52149 | 0.829024 | 6.49E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene52149 | 0.811587 | 6.50E-51 | -1.69E-46 |
| MS.gene050518 | MS.gene52149 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene52149 | 0.806509 | 7.95E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene52149 | 0.810284 | 1.24E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene52149 | 0.860641 | 1.79E-63 | -1.69E-46 |
| MS.gene050770 | MS.gene52149 | 0.864759 | 9.65E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene52149 | 0.860537 | 1.93E-63 | -1.69E-46 |
| MS.gene050812 | MS.gene52149 | 0.812578 | 3.95E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene52149 | 0.816907 | 4.34E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene52149 | 0.830683 | 2.56E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene52149 | 0.810648 | 1.04E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene52149 | 0.821436 | 4.04E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene52149 | 0.888159 | 7.56E-73 | -1.69E-46 |
| MS.gene051471 | MS.gene52149 | 0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene52149 | 0.829812 | 4.17E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene52149 | 0.846682 | 1.86E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene52149 | 0.802015 | 6.85E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene52149 | 0.87239 | 3.30E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene52149 | 0.844601 | 6.83E-59 | -1.69E-46 |
| MS.gene051949 | MS.gene52149 | 0.815634 | 8.36E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene52149 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene52149 | 0.803773 | 2.97E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene52149 | 0.858794 | 6.45E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene52149 | 0.882504 | 9.85E-71 | -1.69E-46 |
| MS.gene052310 | MS.gene52149 | 0.841448 | 4.72E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene52149 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene52149 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene52149 | 0.873851 | 1.07E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene52149 | 0.826122 | 3.23E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene52149 | 0.823951 | 1.05E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene52149 | 0.844831 | 5.93E-59 | -1.69E-46 |
| MS.gene052870 | MS.gene52149 | 0.870698 | 1.20E-66 | -1.69E-46 |
| MS.gene052872 | MS.gene52149 | 0.864732 | 9.84E-65 | -1.69E-46 |
| MS.gene053009 | MS.gene52149 | 0.89417 | 3.17E-75 | -1.69E-46 |
| MS.gene053103 | MS.gene52149 | 0.839366 | 1.65E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene52149 | 0.831527 | 1.59E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene52149 | 0.809512 | 1.82E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene52149 | 0.814258 | 1.69E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene52149 | 0.83162 | 1.51E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene52149 | 0.824308 | 8.66E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene52149 | 0.870901 | 1.03E-66 | -1.69E-46 |
| MS.gene053384 | MS.gene52149 | 0.833614 | 4.82E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene52149 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene52149 | 0.840424 | 8.77E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene52149 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene52149 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene52149 | 0.837612 | 4.69E-57 | -1.69E-46 |
| MS.gene054123 | MS.gene52149 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene52149 | 0.838515 | 2.75E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene52149 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene52149 | 0.813764 | 2.17E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene52149 | 0.8696 | 2.74E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene52149 | 0.808097 | 3.66E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene52149 | 0.807212 | 5.64E-50 | -1.69E-46 |
| MS.gene054804 | MS.gene52149 | 0.811215 | 7.83E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene52149 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene52149 | 0.862299 | 5.59E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene52149 | 0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene055212 | MS.gene52149 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene52149 | 0.857261 | 1.84E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene52149 | 0.801111 | 1.05E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene52149 | 0.807141 | 5.84E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene52149 | 0.890356 | 1.06E-73 | -1.69E-46 |
| MS.gene055412 | MS.gene52149 | 0.848951 | 4.42E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene52149 | 0.861992 | 6.95E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene52149 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene52149 | 0.857655 | 1.41E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene52149 | 0.852189 | 5.44E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene52149 | 0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene52149 | 0.826816 | 2.20E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene52149 | 0.833688 | 4.62E-56 | -1.69E-46 |
| MS.gene056487 | MS.gene52149 | 0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene52149 | 0.807631 | 4.60E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene52149 | 0.870904 | 1.03E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene52149 | 0.842404 | 2.64E-58 | -1.69E-46 |
| MS.gene056719 | MS.gene52149 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene52149 | 0.893583 | 5.49E-75 | -1.69E-46 |
| MS.gene056903 | MS.gene52149 | 0.812894 | 3.37E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene52149 | 0.835193 | 1.93E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene52149 | 0.824986 | 6.00E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene52149 | 0.803682 | 3.10E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene52149 | 0.8999 | 1.25E-77 | -1.69E-46 |
| MS.gene057146 | MS.gene52149 | 0.825243 | 5.21E-54 | -1.69E-46 |
| MS.gene057246 | MS.gene52149 | 0.843607 | 1.26E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene52149 | 0.806065 | 9.86E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene52149 | 0.820066 | 8.35E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene52149 | 0.822986 | 1.77E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene52149 | 0.838102 | 3.51E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene52149 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene52149 | 0.80651 | 7.95E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene52149 | 0.845051 | 5.17E-59 | -1.69E-46 |
| MS.gene058293 | MS.gene52149 | 0.819125 | 1.37E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene52149 | 0.81821 | 2.21E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene52149 | 0.843428 | 1.41E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene52149 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene52149 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene52149 | 0.867397 | 1.41E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene52149 | 0.823841 | 1.11E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene52149 | 0.811055 | 8.48E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene52149 | 0.808227 | 3.44E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene52149 | 0.8127 | 3.72E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene52149 | 0.847345 | 1.23E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene52149 | 0.819262 | 1.27E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene52149 | 0.82121 | 4.56E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene52149 | 0.857437 | 1.63E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene52149 | 0.801225 | 9.95E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene52149 | 0.842623 | 2.31E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene52149 | 0.84938 | 3.36E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene52149 | 0.855175 | 7.53E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene52149 | 0.85323 | 2.74E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene52149 | 0.829469 | 5.06E-55 | -1.69E-46 |
| MS.gene059858 | MS.gene52149 | 0.830198 | 3.36E-55 | -1.69E-46 |
| MS.gene05986 | MS.gene52149 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene52149 | 0.839612 | 1.43E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene52149 | 0.873865 | 1.06E-67 | -1.69E-46 |
| MS.gene060762 | MS.gene52149 | 0.834651 | 2.65E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene52149 | 0.844654 | 6.61E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene52149 | 0.872375 | 3.34E-67 | -1.69E-46 |
| MS.gene060832 | MS.gene52149 | 0.828325 | 9.57E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene52149 | 0.810791 | 9.67E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene52149 | 0.856429 | 3.24E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene52149 | 0.848598 | 5.54E-60 | -1.69E-46 |
| MS.gene061200 | MS.gene52149 | 0.859321 | 4.48E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52149.t1 | MTR_4g075040 | 98.232 | 396 | 6 | 1 | 1 | 395 | 1 | 396 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52149.t1 | AT5G23120 | 88.415 | 328 | 38 | 0 | 68 | 395 | 99 | 426 | 0.0 | 610 |
| MS.gene52149.t1 | AT5G23120 | 88.415 | 328 | 38 | 0 | 68 | 395 | 76 | 403 | 0.0 | 609 |
Find 111 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCATGTTCTGGATTCTTC+TGG | 0.285677 | 4.1:+29154864 | None:intergenic |
| CAATTGGAAGGCTGCTGTTC+AGG | 0.287529 | 4.1:-29156001 | MS.gene52149:CDS |
| TTCTGCAATGAACTGTCTTC+TGG | 0.287847 | 4.1:+29157844 | None:intergenic |
| GGGAACGAGGCAAACCCTTT+TGG | 0.313718 | 4.1:-29156630 | MS.gene52149:CDS |
| CAGCTCTCCATCCCATGTTC+TGG | 0.319178 | 4.1:+29154854 | None:intergenic |
| CGGTGTCGGCTACTCTTAAT+AGG | 0.320019 | 4.1:-29155975 | MS.gene52149:intron |
| TGACCATGGTTAGGATCTTC+AGG | 0.343300 | 4.1:+29157698 | None:intergenic |
| AACCACGAAGCTTCGAGGTC+TGG | 0.349790 | 4.1:+29157892 | None:intergenic |
| GACAAGAAGGGATTTGTATT+GGG | 0.359279 | 4.1:-29152244 | MS.gene52149:CDS |
| CCAATTGTATCCTCTGTTTG+AGG | 0.361796 | 4.1:+29156017 | None:intergenic |
| TGCTGAACTTCCTGGTGATA+TGG | 0.362801 | 4.1:-29156426 | MS.gene52149:intron |
| TCCTGATGCTGGAGAGAGTT+GGG | 0.369099 | 4.1:-29156465 | MS.gene52149:CDS |
| CCACTCAGTGCTGAACTTCC+TGG | 0.370960 | 4.1:-29156434 | MS.gene52149:CDS |
| TGACAAGAAGGGATTTGTAT+TGG | 0.379966 | 4.1:-29152245 | MS.gene52149:CDS |
| CAGGATGAGGCTTGGGCAGC+AGG | 0.383928 | 4.1:-29153567 | MS.gene52149:CDS |
| GGAGAGCTGATGGTGGTCTC+TGG | 0.387735 | 4.1:-29154840 | MS.gene52149:CDS |
| AGAACAACACCAGGATCAAT+AGG | 0.404837 | 4.1:+29157740 | None:intergenic |
| ACCACGAAGCTTCGAGGTCT+GGG | 0.406731 | 4.1:+29157893 | None:intergenic |
| CTCCATCTTTAGTCTCCAAA+AGG | 0.407511 | 4.1:+29156615 | None:intergenic |
| ATTCTCTTGAGAACTAATAA+TGG | 0.408224 | 4.1:-29153534 | MS.gene52149:CDS |
| GGAGTGTACAACAGAATTGC+AGG | 0.409262 | 4.1:+29156485 | None:intergenic |
| TCCCAACTCTCTCCAGCATC+AGG | 0.409768 | 4.1:+29156464 | None:intergenic |
| GGATTTGTATTGGGAAATGA+TGG | 0.410591 | 4.1:-29152235 | MS.gene52149:CDS |
| CTAAAGATGGAGGAAGAACT+TGG | 0.410832 | 4.1:-29156604 | MS.gene52149:CDS |
| GCTTGGGCAGCAGGTGGCAG+TGG | 0.414180 | 4.1:-29153558 | MS.gene52149:CDS |
| ACAGATAACTGAAGAATTTG+AGG | 0.416527 | 4.1:-29154036 | MS.gene52149:intron |
| CATGACCTGGGAGCCTGGTC+AGG | 0.417923 | 4.1:-29155500 | MS.gene52149:intron |
| AGGAAATTCCTGTTCAAAGC+CGG | 0.433921 | 4.1:-29154016 | MS.gene52149:CDS |
| CTGAAGATACTCTTTCTGAA+TGG | 0.436065 | 4.1:-29157778 | MS.gene52149:CDS |
| TTTAATTCAATCAGCTTCAA+AGG | 0.437902 | 4.1:-29156533 | MS.gene52149:CDS |
| ATGAATTCAGGATGAGGCTT+GGG | 0.443791 | 4.1:-29153574 | MS.gene52149:intron |
| CCTCAAACAGAGGATACAAT+TGG | 0.450180 | 4.1:-29156017 | MS.gene52149:CDS |
| ACAGTTTCTAGTGGTATTAG+TGG | 0.451172 | 4.1:-29155610 | MS.gene52149:CDS |
| TGAAGATACTCTTTCTGAAT+GGG | 0.453872 | 4.1:-29157777 | MS.gene52149:CDS |
| AATGAACTGTCTTCTGGTTC+TGG | 0.453938 | 4.1:+29157850 | None:intergenic |
| TTCTACATGACCTGGGAGCC+TGG | 0.456770 | 4.1:-29155505 | MS.gene52149:CDS |
| AAATGTGTAGGTATACATAA+AGG | 0.461448 | 4.1:-29156094 | MS.gene52149:intron |
| TCCCAGACCTCGAAGCTTCG+TGG | 0.469085 | 4.1:-29157894 | MS.gene52149:CDS |
| TGAATGATGGATTTAGAAGA+AGG | 0.472189 | 4.1:+29157920 | None:intergenic |
| GGTCTCTGGCTTCTTGTTCG+TGG | 0.472681 | 4.1:-29154826 | MS.gene52149:CDS |
| GGGAAAGAAGGATGGATTGT+GGG | 0.472809 | 4.1:-29156512 | MS.gene52149:CDS |
| CGTGCTTGTTCCTTCTCAGT+TGG | 0.474602 | 4.1:-29157807 | MS.gene52149:CDS |
| GAAGGCTGCTGTTCAGGAAT+CGG | 0.481979 | 4.1:-29155995 | MS.gene52149:CDS |
| AAATGATTATGACCATGGTT+AGG | 0.486803 | 4.1:+29157689 | None:intergenic |
| GGAGTCTTGCTTCGCTACCT+TGG | 0.487018 | 4.1:-29152214 | MS.gene52149:CDS |
| TTAATTCAATCAGCTTCAAA+GGG | 0.489001 | 4.1:-29156532 | MS.gene52149:CDS |
| CTAATAATGGTGGCAAGTCA+TGG | 0.490904 | 4.1:-29153521 | MS.gene52149:CDS |
| GGAAATTCCTGTTCAAAGCC+GGG | 0.494616 | 4.1:-29154015 | MS.gene52149:CDS |
| CCTCACCTGACCAGGCTCCC+AGG | 0.496515 | 4.1:+29155495 | None:intergenic |
| GCTTTAACCACGAAGCTTCG+AGG | 0.497087 | 4.1:+29157887 | None:intergenic |
| CTGGCAACTGCTCTGTTATG+TGG | 0.499429 | 4.1:+29154883 | None:intergenic |
| ATCAGCTTCAAAGGGAAAGA+AGG | 0.505308 | 4.1:-29156524 | MS.gene52149:CDS |
| GAAGAAGGTAGTTGAGATAA+CGG | 0.506695 | 4.1:+29157935 | None:intergenic |
| GTTTATCTACCTATTGATCC+TGG | 0.509773 | 4.1:-29157749 | MS.gene52149:CDS |
| AGTGGTGCAAGCTATTACAC+TGG | 0.515102 | 4.1:-29155592 | MS.gene52149:CDS |
| CAGGTTCATTGATGACAAGA+AGG | 0.519980 | 4.1:-29152257 | MS.gene52149:CDS |
| TATGAATTCAGGATGAGGCT+TGG | 0.522277 | 4.1:-29153575 | MS.gene52149:intron |
| CTGTTGTACACTCCTGATGC+TGG | 0.524887 | 4.1:-29156476 | MS.gene52149:CDS |
| GGGTTTGGCATTCTTGATGT+CGG | 0.525167 | 4.1:-29153993 | MS.gene52149:CDS |
| TCAGACTTTGCCAACTGAGA+AGG | 0.529755 | 4.1:+29157797 | None:intergenic |
| AGTAAAAGCCTCACCTGACC+AGG | 0.530594 | 4.1:+29155487 | None:intergenic |
| CTCCTGATGCTGGAGAGAGT+TGG | 0.533505 | 4.1:-29156466 | MS.gene52149:CDS |
| TAATGACAAGAGTGCGGAGA+TGG | 0.534559 | 4.1:-29156067 | MS.gene52149:CDS |
| AGGTTCATTGATGACAAGAA+GGG | 0.535774 | 4.1:-29152256 | MS.gene52149:CDS |
| GTGAACTGCAGAGTCGCCAT+TGG | 0.541473 | 4.1:+29157989 | None:intergenic |
| CTCTTCAGAACAGTTTCTAG+TGG | 0.545286 | 4.1:-29155619 | MS.gene52149:intron |
| AGGGAAAGAAGGATGGATTG+TGG | 0.545951 | 4.1:-29156513 | MS.gene52149:CDS |
| TCCATCTTTAGTCTCCAAAA+GGG | 0.548159 | 4.1:+29156616 | None:intergenic |
| AAATCTTCATCTTCTGCGGA+TGG | 0.551204 | 4.1:+29156566 | None:intergenic |
| GTTAAAATCTTCATCTTCTG+CGG | 0.555309 | 4.1:+29156562 | None:intergenic |
| GAAGAATCCAGAACATGGGA+TGG | 0.558266 | 4.1:-29154861 | MS.gene52149:CDS |
| AACTGTCTTCTGGTTCTGGA+AGG | 0.558899 | 4.1:+29157854 | None:intergenic |
| GCTTCAAAGGGAAAGAAGGA+TGG | 0.564781 | 4.1:-29156520 | MS.gene52149:CDS |
| TAATAATGGTGGCAAGTCAT+GGG | 0.567435 | 4.1:-29153520 | MS.gene52149:CDS |
| AGGTCTGGGAGAATGAATGA+TGG | 0.567907 | 4.1:+29157907 | None:intergenic |
| TGCCAGAAGAATCCAGAACA+TGG | 0.568338 | 4.1:-29154866 | MS.gene52149:CDS |
| GCTAAATAAAGCTCTAACCA+AGG | 0.573284 | 4.1:+29152197 | None:intergenic |
| GCGGAGATGGTGACAGATGA+AGG | 0.574878 | 4.1:-29156054 | MS.gene52149:CDS |
| TGCTGTTCAGGAATCGGTGT+CGG | 0.575734 | 4.1:-29155989 | MS.gene52149:CDS |
| TGTTGTCAGCAGCTTTGTCA+CGG | 0.578481 | 4.1:+29153496 | None:intergenic |
| ACTGCAACATACCTTCCATC+GGG | 0.579159 | 4.1:+29155544 | None:intergenic |
| ATATATGTTACCTCAAACAG+AGG | 0.581515 | 4.1:-29156027 | MS.gene52149:CDS |
| GTGGCAACTTCTACATGACC+TGG | 0.584090 | 4.1:-29155513 | MS.gene52149:CDS |
| GACTGCAACATACCTTCCAT+CGG | 0.584903 | 4.1:+29155543 | None:intergenic |
| CTCTGGCTTCTTGTTCGTGG+AGG | 0.590994 | 4.1:-29154823 | MS.gene52149:CDS |
| GATGAGGCTTGGGCAGCAGG+TGG | 0.600534 | 4.1:-29153564 | MS.gene52149:CDS |
| AGCATATATACCATATCACC+AGG | 0.604158 | 4.1:+29156416 | None:intergenic |
| GAAATTCCTGTTCAAAGCCG+GGG | 0.606014 | 4.1:-29154014 | MS.gene52149:CDS |
| CATCAAGAATGCCAAACCCC+CGG | 0.606370 | 4.1:+29153997 | None:intergenic |
| GTTCCTGAAGATCCTAACCA+TGG | 0.609851 | 4.1:-29157701 | MS.gene52149:intron |
| TCAATCGATCTCCCGATGGA+AGG | 0.610839 | 4.1:-29155555 | MS.gene52149:CDS |
| ATGCTGGAGAGAGTTGGGAA+AGG | 0.633423 | 4.1:-29156460 | MS.gene52149:CDS |
| CTCTTGAGAACTAATAATGG+TGG | 0.633424 | 4.1:-29153531 | MS.gene52149:CDS |
| TAAAGATGGAGGAAGAACTT+GGG | 0.633471 | 4.1:-29156603 | MS.gene52149:CDS |
| AACATGGGATGGAGAGCTGA+TGG | 0.634621 | 4.1:-29154850 | MS.gene52149:CDS |
| GCCAGAAGAATCCAGAACAT+GGG | 0.641481 | 4.1:-29154865 | MS.gene52149:CDS |
| AGGTCATGTAGAAGTTGCCA+CGG | 0.643318 | 4.1:+29155515 | None:intergenic |
| AAATTCCTGTTCAAAGCCGG+GGG | 0.646079 | 4.1:-29154013 | MS.gene52149:CDS |
| AAACAGAGGATACAATTGGA+AGG | 0.654671 | 4.1:-29156013 | MS.gene52149:CDS |
| AGATAACGGTCTGCATAGTG+TGG | 0.655849 | 4.1:+29157949 | None:intergenic |
| TGATGTCGGATATCGTTCAA+CGG | 0.658874 | 4.1:-29153979 | MS.gene52149:intron |
| TGGCAACTTCTACATGACCT+GGG | 0.659223 | 4.1:-29155512 | MS.gene52149:CDS |
| TATGTTGCAGTCTCAAGCCG+TGG | 0.664230 | 4.1:-29155532 | MS.gene52149:CDS |
| ATATCAAGAAGAACAACACC+AGG | 0.666129 | 4.1:+29157731 | None:intergenic |
| AACAAGCACGGATATAGCAG+TGG | 0.669152 | 4.1:+29157820 | None:intergenic |
| GGCAACTAATGACAAGAGTG+CGG | 0.670995 | 4.1:-29156073 | MS.gene52149:CDS |
| ACTGTCAATCGATCTCCCGA+TGG | 0.671901 | 4.1:-29155559 | MS.gene52149:CDS |
| TCTGCGGATGGTATAGAACG+TGG | 0.679981 | 4.1:+29156578 | None:intergenic |
| CAACTGAGAAGGAACAAGCA+CGG | 0.692148 | 4.1:+29157808 | None:intergenic |
| CCAGGAAGTTCAGCACTGAG+TGG | 0.694458 | 4.1:+29156434 | None:intergenic |
| ATGGGATGGAGAGCTGATGG+TGG | 0.712985 | 4.1:-29154847 | MS.gene52149:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATGATATAAATGAA+AGG | + | chr4.1:29155982-29156001 | None:intergenic | 10.0% |
| !! | AAATAATGATATAAATGAAA+GGG | + | chr4.1:29155981-29156000 | None:intergenic | 10.0% |
| !! | TTATATTCTACAAAATATTA+CGG | + | chr4.1:29156947-29156966 | None:intergenic | 10.0% |
| !! | AATTTGAAAAAACAAAATTG+AGG | + | chr4.1:29156101-29156120 | None:intergenic | 15.0% |
| !! | ACTAACATACAAAATTATAA+AGG | - | chr4.1:29155061-29155080 | MS.gene52149:intron | 15.0% |
| !! | ATTGACCAAAAAAAATTTAA+TGG | + | chr4.1:29156035-29156054 | None:intergenic | 15.0% |
| !! | ATTTACAAAATTATGAATTC+AGG | - | chr4.1:29156610-29156629 | MS.gene52149:CDS | 15.0% |
| !! | CTATGAAAAAAGATAAAATA+AGG | - | chr4.1:29153284-29153303 | MS.gene52149:intron | 15.0% |
| !! | TAAATATTATTAGTAGTAGT+TGG | - | chr4.1:29153856-29153875 | MS.gene52149:intron | 15.0% |
| !! | TTATGAACTAAAATAGAAAA+TGG | - | chr4.1:29157016-29157035 | MS.gene52149:intron | 15.0% |
| !!! | ATATTTTCATAAGTTGTTTT+CGG | + | chr4.1:29153168-29153187 | None:intergenic | 15.0% |
| !!! | CTTTTTTCATAGAAATATAT+GGG | + | chr4.1:29153276-29153295 | None:intergenic | 15.0% |
| !!! | TACATGTTTATTTCATTTTT+AGG | - | chr4.1:29155279-29155298 | MS.gene52149:intron | 15.0% |
| !!! | TCTTTTTTCATAGAAATATA+TGG | + | chr4.1:29153277-29153296 | None:intergenic | 15.0% |
| !!! | TTAGTTCATAATTATTTTAC+AGG | + | chr4.1:29157007-29157026 | None:intergenic | 15.0% |
| !! | AATAAAGGAAAATAAAGTAG+CGG | + | chr4.1:29157739-29157758 | None:intergenic | 20.0% |
| !! | AATAAGGTGAAAATATCTTA+TGG | - | chr4.1:29153346-29153365 | MS.gene52149:intron | 20.0% |
| !! | AATAAGTTGTTTATCAAAAC+AGG | + | chr4.1:29152988-29153007 | None:intergenic | 20.0% |
| !! | ATATTAATACATTTGGAAGT+AGG | - | chr4.1:29154408-29154427 | MS.gene52149:intron | 20.0% |
| !! | ATGATTGAGTATATTTAAGT+GGG | - | chr4.1:29156328-29156347 | MS.gene52149:intron | 20.0% |
| !! | GTAGATAAAAACAATACATT+TGG | + | chr4.1:29155853-29155872 | None:intergenic | 20.0% |
| !! | TACAAAATAATAAATGAGTG+AGG | + | chr4.1:29156389-29156408 | None:intergenic | 20.0% |
| !! | TACAAAATTTAGGTACTATT+TGG | - | chr4.1:29152933-29152952 | MS.gene52149:intron | 20.0% |
| !! | TAGTCGTATATTAATACATT+TGG | - | chr4.1:29154401-29154420 | MS.gene52149:intron | 20.0% |
| !! | TATGATTGAGTATATTTAAG+TGG | - | chr4.1:29156327-29156346 | MS.gene52149:intron | 20.0% |
| !! | TATTAATACATTTGGAAGTA+GGG | - | chr4.1:29154409-29154428 | MS.gene52149:intron | 20.0% |
| !! | TTCATTAATAGCATCATAAA+AGG | + | chr4.1:29154438-29154457 | None:intergenic | 20.0% |
| !! | TTTGAATTTGTGTTGTAAAA+TGG | - | chr4.1:29153513-29153532 | MS.gene52149:CDS | 20.0% |
| !!! | AAATGTTTTCTTAAAAGTAG+TGG | + | chr4.1:29154970-29154989 | None:intergenic | 20.0% |
| !!! | AAATTTGTTTCTAATGTAGA+AGG | - | chr4.1:29152869-29152888 | MS.gene52149:intron | 20.0% |
| !!! | AACTAGTTTTTATCATTTCT+AGG | + | chr4.1:29152810-29152829 | None:intergenic | 20.0% |
| !!! | AAGATGAAGATTTTAACTAT+AGG | - | chr4.1:29153640-29153659 | MS.gene52149:intron | 20.0% |
| !!! | CTACTTTTAAGAAAACATTT+TGG | - | chr4.1:29154970-29154989 | MS.gene52149:intron | 20.0% |
| !!! | GGGTATAATTTATTTTTTTG+AGG | - | chr4.1:29157548-29157567 | MS.gene52149:intron | 20.0% |
| !!! | TTGGTAATAAATCTTGTAAA+TGG | - | chr4.1:29157904-29157923 | MS.gene52149:CDS | 20.0% |
| !!! | TTTAAAACCTCTAATTTACT+TGG | - | chr4.1:29156809-29156828 | MS.gene52149:intron | 20.0% |
| !!! | TTTAATTTTCCTTTTGCTTT+TGG | + | chr4.1:29157447-29157466 | None:intergenic | 20.0% |
| ! | AAAAAGAAAACTATCCAGAA+GGG | + | chr4.1:29155495-29155514 | None:intergenic | 25.0% |
| ! | AAAATTATGAATTCAGGATG+AGG | - | chr4.1:29156616-29156635 | MS.gene52149:CDS | 25.0% |
| ! | AAACAAACTAGAAAGAATAG+TGG | + | chr4.1:29155823-29155842 | None:intergenic | 25.0% |
| ! | AAAGAGTTACATTCCTTAAA+TGG | + | chr4.1:29154332-29154351 | None:intergenic | 25.0% |
| ! | AAATGTGTAGGTATACATAA+AGG | - | chr4.1:29154102-29154121 | MS.gene52149:intron | 25.0% |
| ! | AATAATACACGAGATTATGA+AGG | - | chr4.1:29157860-29157879 | MS.gene52149:CDS | 25.0% |
| ! | AATTCACTTATTTGACCTTA+TGG | - | chr4.1:29152607-29152626 | MS.gene52149:intron | 25.0% |
| ! | ACAAGATGTAAAACATTATG+GGG | + | chr4.1:29155892-29155911 | None:intergenic | 25.0% |
| ! | AGAAGTGAAAAAGGTTTAAA+AGG | - | chr4.1:29155922-29155941 | MS.gene52149:intron | 25.0% |
| ! | AGGATTTCATAAACATGATT+TGG | + | chr4.1:29153477-29153496 | None:intergenic | 25.0% |
| ! | ATATTATTAGTAGTAGTTGG+AGG | - | chr4.1:29153859-29153878 | MS.gene52149:intron | 25.0% |
| ! | ATTAAACTGTTTATCCATAC+AGG | - | chr4.1:29152783-29152802 | MS.gene52149:intron | 25.0% |
| ! | ATTCTCTTGAGAACTAATAA+TGG | - | chr4.1:29156662-29156681 | MS.gene52149:intron | 25.0% |
| ! | CACAAGATGTAAAACATTAT+GGG | + | chr4.1:29155893-29155912 | None:intergenic | 25.0% |
| ! | GAACTAAAATAGAAAATGGA+TGG | - | chr4.1:29157020-29157039 | MS.gene52149:intron | 25.0% |
| ! | GAAGTGAAAAAGGTTTAAAA+GGG | - | chr4.1:29155923-29155942 | MS.gene52149:intron | 25.0% |
| ! | GAGAATATATCAACAACATT+AGG | + | chr4.1:29156864-29156883 | None:intergenic | 25.0% |
| ! | GATAAAAACAATACATTTGG+TGG | + | chr4.1:29155850-29155869 | None:intergenic | 25.0% |
| ! | GTACACTAAAATGATATTCT+CGG | + | chr4.1:29155437-29155456 | None:intergenic | 25.0% |
| ! | TAATCAAGTGTTTATAGCAT+AGG | + | chr4.1:29152767-29152786 | None:intergenic | 25.0% |
| ! | TCACAAAATGTTAAATGTGT+AGG | - | chr4.1:29154090-29154109 | MS.gene52149:intron | 25.0% |
| ! | TCTTATAAGTGCTTATGAAT+AGG | - | chr4.1:29153048-29153067 | MS.gene52149:intron | 25.0% |
| ! | TGATTGAGTATATTTAAGTG+GGG | - | chr4.1:29156329-29156348 | MS.gene52149:intron | 25.0% |
| ! | TGTCATAAATTGTTTCCATA+AGG | + | chr4.1:29152625-29152644 | None:intergenic | 25.0% |
| ! | TGTTGAGAGTTAATATGAAA+AGG | + | chr4.1:29156417-29156436 | None:intergenic | 25.0% |
| ! | TTAAACTGTTTATCCATACA+GGG | - | chr4.1:29152784-29152803 | MS.gene52149:intron | 25.0% |
| ! | TTAATTCAATCAGCTTCAAA+GGG | - | chr4.1:29153664-29153683 | MS.gene52149:intron | 25.0% |
| ! | TTTAATTCAATCAGCTTCAA+AGG | - | chr4.1:29153663-29153682 | MS.gene52149:intron | 25.0% |
| ! | TTTGTGTTGTAAAATGGAAA+CGG | - | chr4.1:29153519-29153538 | MS.gene52149:CDS | 25.0% |
| !! | ACATGATTTGGAAAAGAAAT+AGG | + | chr4.1:29153465-29153484 | None:intergenic | 25.0% |
| !! | AGAGTTTGTAGAACTTTTAT+TGG | - | chr4.1:29157885-29157904 | MS.gene52149:CDS | 25.0% |
| !! | AGTTCTAATCAAAGAAGATT+CGG | + | chr4.1:29154896-29154915 | None:intergenic | 25.0% |
| !! | ATAAAAACTAGTTTCTGTGT+TGG | - | chr4.1:29152817-29152836 | MS.gene52149:intron | 25.0% |
| !! | CATGATTTGGAAAAGAAATA+GGG | + | chr4.1:29153464-29153483 | None:intergenic | 25.0% |
| !! | TTATTTTCGTTAAGTTCTCT+AGG | - | chr4.1:29152666-29152685 | MS.gene52149:intron | 25.0% |
| !!! | AAGTTTTGTCACACTTTTTA+CGG | - | chr4.1:29155667-29155686 | MS.gene52149:intron | 25.0% |
| !!! | ATACGTTTTGATTTTATCAC+TGG | + | chr4.1:29157301-29157320 | None:intergenic | 25.0% |
| !!! | CGGATCCATTAAATTTTTTT+TGG | - | chr4.1:29156027-29156046 | MS.gene52149:CDS | 25.0% |
| !!! | CTTGTACATTTTCTAAGAAA+GGG | + | chr4.1:29155952-29155971 | None:intergenic | 25.0% |
| !!! | GTTAGTAGAATTTTTTCTTC+AGG | + | chr4.1:29155047-29155066 | None:intergenic | 25.0% |
| !!! | TAAGGAAAATGTTGTTTTGT+TGG | - | chr4.1:29156273-29156292 | MS.gene52149:intron | 25.0% |
| !!! | TAAGGTCAAACTGTTTTTAT+AGG | - | chr4.1:29153302-29153321 | MS.gene52149:intron | 25.0% |
| !!! | TATTTCATTTTTAGGCATAC+TGG | - | chr4.1:29155287-29155306 | MS.gene52149:intron | 25.0% |
| AAATGATTATGACCATGGTT+AGG | + | chr4.1:29152510-29152529 | None:intergenic | 30.0% | |
| AACTTTGATACACTTGTTTC+TGG | - | chr4.1:29156062-29156081 | MS.gene52149:CDS | 30.0% | |
| AAGGAATAATACAAAACCGA+TGG | + | chr4.1:29156900-29156919 | None:intergenic | 30.0% | |
| AATAAGCAGAAAAGAGCTTA+TGG | + | chr4.1:29152651-29152670 | None:intergenic | 30.0% | |
| AATAATCCCTATCTCAGTAA+AGG | + | chr4.1:29157095-29157114 | None:intergenic | 30.0% | |
| AATCTCGTGTATTATTTGTG+TGG | + | chr4.1:29157856-29157875 | None:intergenic | 30.0% | |
| ACAGATAACTGAAGAATTTG+AGG | - | chr4.1:29156160-29156179 | MS.gene52149:intron | 30.0% | |
| ACATTCCTTAAATGGCATTA+TGG | + | chr4.1:29154324-29154343 | None:intergenic | 30.0% | |
| ACTACTGAATAGTATACTAC+TGG | - | chr4.1:29157527-29157546 | MS.gene52149:intron | 30.0% | |
| AGTATACTATCCTCCAATAA+AGG | + | chr4.1:29157510-29157529 | None:intergenic | 30.0% | |
| ATAATCCCTATCTCAGTAAA+GGG | + | chr4.1:29157094-29157113 | None:intergenic | 30.0% | |
| ATATATGTTACCTCAAACAG+AGG | - | chr4.1:29154169-29154188 | MS.gene52149:intron | 30.0% | |
| ATTGCTACTCTTGAGTATAT+TGG | + | chr4.1:29154376-29154395 | None:intergenic | 30.0% | |
| CAAACAACAAAAACAGACTA+AGG | + | chr4.1:29153497-29153516 | None:intergenic | 30.0% | |
| CACATTGAAGAAGAAAGTAA+AGG | + | chr4.1:29155118-29155137 | None:intergenic | 30.0% | |
| CCACAAGATGTAAAACATTA+TGG | + | chr4.1:29155894-29155913 | None:intergenic | 30.0% | |
| CTACTGAATAGTATACTACT+GGG | - | chr4.1:29157528-29157547 | MS.gene52149:intron | 30.0% | |
| CTTATGGATATGTCATAAGT+TGG | - | chr4.1:29153362-29153381 | MS.gene52149:intron | 30.0% | |
| GAAAAAGAAAACTATCCAGA+AGG | + | chr4.1:29155496-29155515 | None:intergenic | 30.0% | |
| GAAAATAAAGTAGCGGTATT+GGG | + | chr4.1:29157732-29157751 | None:intergenic | 30.0% | |
| GAATGAAATGATTATGACCA+TGG | + | chr4.1:29152515-29152534 | None:intergenic | 30.0% | |
| GAATGCATGATGTATATGAA+TGG | - | chr4.1:29154292-29154311 | MS.gene52149:intron | 30.0% | |
| GATTGAGTATATTTAAGTGG+GGG | - | chr4.1:29156330-29156349 | MS.gene52149:intron | 30.0% | |
| GTATACTATCCTCCAATAAA+GGG | + | chr4.1:29157509-29157528 | None:intergenic | 30.0% | |
| GTCTTAATGTCTCAAATAGT+TGG | - | chr4.1:29155171-29155190 | MS.gene52149:intron | 30.0% | |
| GTTAAAATCTTCATCTTCTG+CGG | + | chr4.1:29153637-29153656 | None:intergenic | 30.0% | |
| GTTGTGTATTTGTGTAAAAC+TGG | - | chr4.1:29156970-29156989 | MS.gene52149:intron | 30.0% | |
| TACTTTATCCGCTATATTGT+TGG | - | chr4.1:29157813-29157832 | MS.gene52149:CDS | 30.0% | |
| TAGAAATATATGGGTCTGTT+TGG | + | chr4.1:29153267-29153286 | None:intergenic | 30.0% | |
| TAGCTTATACGAAAATGGTA+CGG | - | chr4.1:29152690-29152709 | MS.gene52149:intron | 30.0% | |
| TAGGATAGCTTATACGAAAA+TGG | - | chr4.1:29152685-29152704 | MS.gene52149:intron | 30.0% | |
| TATACTATCCTCCAATAAAG+GGG | + | chr4.1:29157508-29157527 | None:intergenic | 30.0% | |
| TGAAGATACTCTTTCTGAAT+GGG | - | chr4.1:29152419-29152438 | MS.gene52149:intron | 30.0% | |
| TGAGAGTTAATATGAAAAGG+AGG | + | chr4.1:29156414-29156433 | None:intergenic | 30.0% | |
| TGATATAAATGAAAGGGATC+TGG | + | chr4.1:29155975-29155994 | None:intergenic | 30.0% | |
| TTCTGCACTAATAGTAATAG+TGG | - | chr4.1:29155251-29155270 | MS.gene52149:intron | 30.0% | |
| ! | CCATAATGTTTTACATCTTG+TGG | - | chr4.1:29155891-29155910 | MS.gene52149:intron | 30.0% |
| ! | GAAATAGGGTTTGTTCAAAT+TGG | + | chr4.1:29153450-29153469 | None:intergenic | 30.0% |
| ! | TTCAGAGAGTTGCTTTATTA+AGG | - | chr4.1:29156255-29156274 | MS.gene52149:intron | 30.0% |
| ! | TTCTTTGTTTGATTTCATCC+AGG | - | chr4.1:29154997-29155016 | MS.gene52149:intron | 30.0% |
| ! | TTTTACATCTTGTGGAAGTA+GGG | - | chr4.1:29155899-29155918 | MS.gene52149:intron | 30.0% |
| !! | AAAATTGAGGAAGTATTCAG+CGG | + | chr4.1:29156088-29156107 | None:intergenic | 30.0% |
| !! | AGACTTTGAAATGAGTGAAA+AGG | + | chr4.1:29155531-29155550 | None:intergenic | 30.0% |
| !! | AGTTTTGTCACACTTTTTAC+GGG | - | chr4.1:29155668-29155687 | MS.gene52149:intron | 30.0% |
| !! | GAATGTAACTCTTTCAAGTT+AGG | - | chr4.1:29154338-29154357 | MS.gene52149:intron | 30.0% |
| !! | GCTTGTACATTTTCTAAGAA+AGG | + | chr4.1:29155953-29155972 | None:intergenic | 30.0% |
| !! | TAAATGGTTTTACTTGCTTC+AGG | - | chr4.1:29157920-29157939 | MS.gene52149:CDS | 30.0% |
| !! | TGAATGATGGATTTAGAAGA+AGG | + | chr4.1:29152279-29152298 | None:intergenic | 30.0% |
| !! | TGCATAATTTTGAGAACAGA+AGG | - | chr4.1:29156125-29156144 | MS.gene52149:intron | 30.0% |
| !! | TTGCTTGGTAGTTTTACTTT+TGG | - | chr4.1:29154760-29154779 | MS.gene52149:intron | 30.0% |
| !!! | ACTGTTTTTATAGGCTATCT+TGG | - | chr4.1:29153311-29153330 | MS.gene52149:intron | 30.0% |
| !!! | AGTAGAATTTTTTCTTCAGG+AGG | + | chr4.1:29155044-29155063 | None:intergenic | 30.0% |
| AAACACTTGTGAGACTGTTT+GGG | + | chr4.1:29153214-29153233 | None:intergenic | 35.0% | |
| AAACAGAGGATACAATTGGA+AGG | - | chr4.1:29154183-29154202 | MS.gene52149:intron | 35.0% | |
| AAATGACATCTGTGGCTAAA+TGG | + | chr4.1:29155218-29155237 | None:intergenic | 35.0% | |
| AACCGATGGAACAATATAAG+TGG | + | chr4.1:29156886-29156905 | None:intergenic | 35.0% | |
| ACCTATTGCCAAACAAGATA+AGG | + | chr4.1:29155743-29155762 | None:intergenic | 35.0% | |
| AGAATGAGCTAAACACATCA+TGG | + | chr4.1:29155141-29155160 | None:intergenic | 35.0% | |
| AGCATATATACCATATCACC+AGG | + | chr4.1:29153783-29153802 | None:intergenic | 35.0% | |
| AGCTCTACCAAGTAAATTAG+AGG | + | chr4.1:29156819-29156838 | None:intergenic | 35.0% | |
| ATACTATCCTCCAATAAAGG+GGG | + | chr4.1:29157507-29157526 | None:intergenic | 35.0% | |
| ATATCAAGAAGAACAACACC+AGG | + | chr4.1:29152468-29152487 | None:intergenic | 35.0% | |
| ATCCAGGTGATATCATTGAT+AGG | - | chr4.1:29155013-29155032 | MS.gene52149:intron | 35.0% | |
| ATCCTATCAATGATATCACC+TGG | + | chr4.1:29155018-29155037 | None:intergenic | 35.0% | |
| CAACTGTACAAATTAGCTGT+TGG | - | chr4.1:29154018-29154037 | MS.gene52149:CDS | 35.0% | |
| CACTCATTTCAAAGTCTTTC+TGG | - | chr4.1:29155534-29155553 | MS.gene52149:CDS | 35.0% | |
| CAGTTACATCAAACGAAGTT+TGG | + | chr4.1:29154267-29154286 | None:intergenic | 35.0% | |
| CCTATTGCCAAACAAGATAA+GGG | + | chr4.1:29155742-29155761 | None:intergenic | 35.0% | |
| CTATTGCCAAACAAGATAAG+GGG | + | chr4.1:29155741-29155760 | None:intergenic | 35.0% | |
| CTCCACTTATATTGTTCCAT+CGG | - | chr4.1:29156881-29156900 | MS.gene52149:intron | 35.0% | |
| CTCTTGAGAACTAATAATGG+TGG | - | chr4.1:29156665-29156684 | MS.gene52149:intron | 35.0% | |
| CTGAAGATACTCTTTCTGAA+TGG | - | chr4.1:29152418-29152437 | MS.gene52149:intron | 35.0% | |
| GAAGAAGGTAGTTGAGATAA+CGG | + | chr4.1:29152264-29152283 | None:intergenic | 35.0% | |
| GACAAGAAGGGATTTGTATT+GGG | - | chr4.1:29157952-29157971 | MS.gene52149:CDS | 35.0% | |
| GATGTGGAAGAAAGAGAAAA+AGG | + | chr4.1:29157657-29157676 | None:intergenic | 35.0% | |
| GCATGATGTATATGAATGGA+TGG | - | chr4.1:29154296-29154315 | MS.gene52149:intron | 35.0% | |
| GGAAAATAAAGTAGCGGTAT+TGG | + | chr4.1:29157733-29157752 | None:intergenic | 35.0% | |
| GGATTTGTATTGGGAAATGA+TGG | - | chr4.1:29157961-29157980 | MS.gene52149:CDS | 35.0% | |
| GTAGTAGTAGAAACAAGCAT+TGG | + | chr4.1:29153816-29153835 | None:intergenic | 35.0% | |
| GTGGGGATTATTCATGTATA+CGG | + | chr4.1:29157418-29157437 | None:intergenic | 35.0% | |
| GTGTATTTGTGTAAAACTGG+AGG | - | chr4.1:29156973-29156992 | MS.gene52149:intron | 35.0% | |
| GTTTATCTACCTATTGATCC+TGG | - | chr4.1:29152447-29152466 | MS.gene52149:intron | 35.0% | |
| TAAACACTTGTGAGACTGTT+TGG | + | chr4.1:29153215-29153234 | None:intergenic | 35.0% | |
| TAAAGATGGAGGAAGAACTT+GGG | - | chr4.1:29153593-29153612 | MS.gene52149:intron | 35.0% | |
| TAATAATGGTGGCAAGTCAT+GGG | - | chr4.1:29156676-29156695 | MS.gene52149:intron | 35.0% | |
| TAATACATTTGGAAGTAGGG+TGG | - | chr4.1:29154412-29154431 | MS.gene52149:intron | 35.0% | |
| TAATCCCTATCTCAGTAAAG+GGG | + | chr4.1:29157093-29157112 | None:intergenic | 35.0% | |
| TATATATGCTGTACACCCAT+AGG | - | chr4.1:29157380-29157399 | MS.gene52149:intron | 35.0% | |
| TATCAACAACATTAGGAACC+TGG | + | chr4.1:29156857-29156876 | None:intergenic | 35.0% | |
| TCAAATTGAAAGAACTGCAG+AGG | + | chr4.1:29156533-29156552 | None:intergenic | 35.0% | |
| TCAACGGAAAAAGTGACAAA+TGG | + | chr4.1:29157685-29157704 | None:intergenic | 35.0% | |
| TCCATCTTTAGTCTCCAAAA+GGG | + | chr4.1:29153583-29153602 | None:intergenic | 35.0% | |
| TCTCCTTGGAGAAATGAAAA+TGG | - | chr4.1:29157049-29157068 | MS.gene52149:intron | 35.0% | |
| TGACAAGAAGGGATTTGTAT+TGG | - | chr4.1:29157951-29157970 | MS.gene52149:CDS | 35.0% | |
| TGACCAAAATTTCCACTTCA+CGG | - | chr4.1:29157122-29157141 | MS.gene52149:intron | 35.0% | |
| TGAGGAAATCATTGACAAAG+AGG | + | chr4.1:29157190-29157209 | None:intergenic | 35.0% | |
| TGGATGTACAAGAAGATTCT+TGG | + | chr4.1:29154950-29154969 | None:intergenic | 35.0% | |
| TGTACAATTAGATAGACCAC+AGG | + | chr4.1:29154790-29154809 | None:intergenic | 35.0% | |
| TGTGGTCTATCTAATTGTAC+AGG | - | chr4.1:29154789-29154808 | MS.gene52149:intron | 35.0% | |
| TTGGAGAGCTTATGGAAATA+AGG | - | chr4.1:29153330-29153349 | MS.gene52149:intron | 35.0% | |
| TTTACTCCCCTTATCTTGTT+TGG | - | chr4.1:29155732-29155751 | MS.gene52149:intron | 35.0% | |
| ! | AGGTTCATTGATGACAAGAA+GGG | - | chr4.1:29157940-29157959 | MS.gene52149:CDS | 35.0% |
| ! | ATGTCTCAAATAGTTGGCTT+TGG | - | chr4.1:29155177-29155196 | MS.gene52149:intron | 35.0% |
| ! | GTTTTACATCTTGTGGAAGT+AGG | - | chr4.1:29155898-29155917 | MS.gene52149:intron | 35.0% |
| ! | TGACCATTTTCATTTCTCCA+AGG | + | chr4.1:29157055-29157074 | None:intergenic | 35.0% |
| ! | TGCTTTTGCTTCTATTTGCT+TGG | - | chr4.1:29154745-29154764 | MS.gene52149:intron | 35.0% |
| ! | TGGATCCATAATGCCATTTA+AGG | - | chr4.1:29154316-29154335 | MS.gene52149:intron | 35.0% |
| ! | TTTAGAGGAGTGTAACAGAA+TGG | + | chr4.1:29157162-29157181 | None:intergenic | 35.0% |
| !! | ACAGTTTCTAGTGGTATTAG+TGG | - | chr4.1:29154586-29154605 | MS.gene52149:intron | 35.0% |
| !! | ACGGTAGTTATTTTCACCTA+TGG | + | chr4.1:29157399-29157418 | None:intergenic | 35.0% |
| !! | CGGTAGTTATTTTCACCTAT+GGG | + | chr4.1:29157398-29157417 | None:intergenic | 35.0% |
| !! | GACTTTTGATTGTTTTGTGC+AGG | + | chr4.1:29157470-29157489 | None:intergenic | 35.0% |
| !! | GTTTTGTCACACTTTTTACG+GGG | - | chr4.1:29155669-29155688 | MS.gene52149:intron | 35.0% |
| !! | TTTAGCCACAGATGTCATTT+TGG | - | chr4.1:29155218-29155237 | MS.gene52149:intron | 35.0% |
| !!! | ATTAGGAACCTGGTTTTGTT+GGG | + | chr4.1:29156847-29156866 | None:intergenic | 35.0% |
| !!! | TTCCTTTTGCTTTTGGTGTT+AGG | + | chr4.1:29157440-29157459 | None:intergenic | 35.0% |
| !!! | TTTTGCTTTTGGTGTTAGGT+GGG | + | chr4.1:29157436-29157455 | None:intergenic | 35.0% |
| AAAGAGAAAAAGGAGCAGGA+AGG | + | chr4.1:29157647-29157666 | None:intergenic | 40.0% | |
| AAATCTTCATCTTCTGCGGA+TGG | + | chr4.1:29153633-29153652 | None:intergenic | 40.0% | |
| AATCCCTATCTCAGTAAAGG+GGG | + | chr4.1:29157092-29157111 | None:intergenic | 40.0% | |
| ACCAACCAAAATGACATCTG+TGG | + | chr4.1:29155226-29155245 | None:intergenic | 40.0% | |
| AGAACAACACCAGGATCAAT+AGG | + | chr4.1:29152459-29152478 | None:intergenic | 40.0% | |
| AGGAAATTCCTGTTCAAAGC+CGG | - | chr4.1:29156180-29156199 | MS.gene52149:intron | 40.0% | |
| ATAGCACGTCGAAAGAGATT+AGG | + | chr4.1:29154488-29154507 | None:intergenic | 40.0% | |
| ATCAGCTTCAAAGGGAAAGA+AGG | - | chr4.1:29153672-29153691 | MS.gene52149:intron | 40.0% | |
| ATCCTGTGCCAACAATATAG+CGG | + | chr4.1:29157824-29157843 | None:intergenic | 40.0% | |
| ATGAATTCAGGATGAGGCTT+GGG | - | chr4.1:29156622-29156641 | MS.gene52149:CDS | 40.0% | |
| ATGGATGGAGATAATCTCCT+TGG | - | chr4.1:29157035-29157054 | MS.gene52149:intron | 40.0% | |
| CACCTAACACCAAAAGCAAA+AGG | - | chr4.1:29157435-29157454 | MS.gene52149:intron | 40.0% | |
| CAGTGCAAAAAGCAAAAGAG+AGG | + | chr4.1:29155089-29155108 | None:intergenic | 40.0% | |
| CCAATTGTATCCTCTGTTTG+AGG | + | chr4.1:29154182-29154201 | None:intergenic | 40.0% | |
| CCTCAAACAGAGGATACAAT+TGG | - | chr4.1:29154179-29154198 | MS.gene52149:intron | 40.0% | |
| CTAAAGATGGAGGAAGAACT+TGG | - | chr4.1:29153592-29153611 | MS.gene52149:intron | 40.0% | |
| CTAATAATGGTGGCAAGTCA+TGG | - | chr4.1:29156675-29156694 | MS.gene52149:intron | 40.0% | |
| CTCCATCTTTAGTCTCCAAA+AGG | + | chr4.1:29153584-29153603 | None:intergenic | 40.0% | |
| GAAGAAAGAGAAAAAGGAGC+AGG | + | chr4.1:29157651-29157670 | None:intergenic | 40.0% | |
| GAAGTAGGGAGAAGTGAAAA+AGG | - | chr4.1:29155913-29155932 | MS.gene52149:intron | 40.0% | |
| GAATTCCAGTCACACAATGT+AGG | + | chr4.1:29152592-29152611 | None:intergenic | 40.0% | |
| GAGGACCACTAGTATCATAT+GGG | + | chr4.1:29155459-29155478 | None:intergenic | 40.0% | |
| GAGTATATTTAAGTGGGGGT+GGG | - | chr4.1:29156334-29156353 | MS.gene52149:intron | 40.0% | |
| GGAAATCATTGACAAAGAGG+AGG | + | chr4.1:29157187-29157206 | None:intergenic | 40.0% | |
| GTGTACCCATATGATACTAG+TGG | - | chr4.1:29155451-29155470 | MS.gene52149:intron | 40.0% | |
| TATGAATTCAGGATGAGGCT+TGG | - | chr4.1:29156621-29156640 | MS.gene52149:CDS | 40.0% | |
| TATGGTGCATGTTTACAGGA+GGG | + | chr4.1:29157764-29157783 | None:intergenic | 40.0% | |
| TGAGTATATTTAAGTGGGGG+TGG | - | chr4.1:29156333-29156352 | MS.gene52149:intron | 40.0% | |
| TGATGTCGGATATCGTTCAA+CGG | - | chr4.1:29156217-29156236 | MS.gene52149:intron | 40.0% | |
| TTCCGATAATTGCATCCGAT+AGG | + | chr4.1:29157789-29157808 | None:intergenic | 40.0% | |
| TTCTGCAATGAACTGTCTTC+TGG | + | chr4.1:29152355-29152374 | None:intergenic | 40.0% | |
| ! | AAATGGAAACGGATTTGTCG+TGG | - | chr4.1:29153530-29153549 | MS.gene52149:CDS | 40.0% |
| ! | ACATAGCTTTTGCGTTGAGT+TGG | - | chr4.1:29153922-29153941 | MS.gene52149:intron | 40.0% |
| ! | AGGAGTGTAACAGAATGGAA+GGG | + | chr4.1:29157157-29157176 | None:intergenic | 40.0% |
| ! | CAGGTTCATTGATGACAAGA+AGG | - | chr4.1:29157939-29157958 | MS.gene52149:CDS | 40.0% |
| ! | CCCTTATCTTGTTTGGCAAT+AGG | - | chr4.1:29155739-29155758 | MS.gene52149:intron | 40.0% |
| ! | CTCTTCAGAACAGTTTCTAG+TGG | - | chr4.1:29154577-29154596 | MS.gene52149:intron | 40.0% |
| ! | GATCCGTGAAGTGGAAATTT+TGG | + | chr4.1:29157128-29157147 | None:intergenic | 40.0% |
| ! | GGTAGTCTTTTTCTCAGCAA+AGG | - | chr4.1:29155394-29155413 | MS.gene52149:intron | 40.0% |
| ! | GTGAGGCTTTTACTTTGTGA+TGG | - | chr4.1:29154718-29154737 | MS.gene52149:intron | 40.0% |
| ! | TATCATTTCTAGGCCCTGTA+TGG | + | chr4.1:29152800-29152819 | None:intergenic | 40.0% |
| ! | TTTTGCCTACATTGTGTGAC+TGG | - | chr4.1:29152584-29152603 | MS.gene52149:intron | 40.0% |
| !! | AATGAACTGTCTTCTGGTTC+TGG | + | chr4.1:29152349-29152368 | None:intergenic | 40.0% |
| !! | ACCCTTTTGGAGACTAAAGA+TGG | - | chr4.1:29153579-29153598 | MS.gene52149:intron | 40.0% |
| !! | CACTAGAAACTGTTCTGAAG+AGG | + | chr4.1:29154579-29154598 | None:intergenic | 40.0% |
| !! | CTTTTGGAGACTAAAGATGG+AGG | - | chr4.1:29153582-29153601 | MS.gene52149:intron | 40.0% |
| !! | GAAGTGGAAATTTTGGTCAC+TGG | + | chr4.1:29157121-29157140 | None:intergenic | 40.0% |
| !! | GACAAAGAGGAGGTATTTAG+AGG | + | chr4.1:29157177-29157196 | None:intergenic | 40.0% |
| !! | TAAAGGGGGTACTCTTACTA+AGG | + | chr4.1:29157078-29157097 | None:intergenic | 40.0% |
| !! | TATTACGGTTTTAGCCTCTC+TGG | + | chr4.1:29156932-29156951 | None:intergenic | 40.0% |
| !! | TCAGCTCTGGAAATGAAAAG+AGG | - | chr4.1:29157275-29157294 | MS.gene52149:intron | 40.0% |
| !! | TTTTACTTTTGGCATGCCTG+TGG | - | chr4.1:29154771-29154790 | MS.gene52149:intron | 40.0% |
| !! | TTTTAGCCTCTCTGGAGAAT+AGG | + | chr4.1:29156924-29156943 | None:intergenic | 40.0% |
| !! | TTTTTCTCAGCAAAGGCACA+GGG | - | chr4.1:29155401-29155420 | MS.gene52149:intron | 40.0% |
| !!! | ATTTTTTTGAGGCCCATCCT+TGG | - | chr4.1:29157559-29157578 | MS.gene52149:intron | 40.0% |
| !!! | CATTAGGAACCTGGTTTTGT+TGG | + | chr4.1:29156848-29156867 | None:intergenic | 40.0% |
| !!! | CTTTTGCTTTTGGTGTTAGG+TGG | + | chr4.1:29157437-29157456 | None:intergenic | 40.0% |
| !!! | TTTGCTTTTGGTGTTAGGTG+GGG | + | chr4.1:29157435-29157454 | None:intergenic | 40.0% |
| !!! | TTTTTTTGAGGCCCATCCTT+GGG | - | chr4.1:29157560-29157579 | MS.gene52149:intron | 40.0% |
| AAATTCCTGTTCAAAGCCGG+GGG | - | chr4.1:29156183-29156202 | MS.gene52149:intron | 45.0% | |
| AACAAGCACGGATATAGCAG+TGG | + | chr4.1:29152379-29152398 | None:intergenic | 45.0% | |
| AACATGCACCATAGGCCTAT+CGG | - | chr4.1:29157771-29157790 | MS.gene52149:CDS | 45.0% | |
| AATTGCATCCGATAGGCCTA+TGG | + | chr4.1:29157782-29157801 | None:intergenic | 45.0% | |
| ACTGCAACATACCTTCCATC+GGG | + | chr4.1:29154655-29154674 | None:intergenic | 45.0% | |
| AGCAGGTTAGAATTGGAGGA+AGG | + | chr4.1:29157213-29157232 | None:intergenic | 45.0% | |
| AGCTAGCAGGTTAGAATTGG+AGG | + | chr4.1:29157217-29157236 | None:intergenic | 45.0% | |
| AGGAAGGAGTAACAACATGC+AGG | + | chr4.1:29157631-29157650 | None:intergenic | 45.0% | |
| AGGCTATCTTGGAGAGCTTA+TGG | - | chr4.1:29153322-29153341 | MS.gene52149:intron | 45.0% | |
| AGGTCATGTAGAAGTTGCCA+CGG | + | chr4.1:29154684-29154703 | None:intergenic | 45.0% | |
| AGGTCTGGGAGAATGAATGA+TGG | + | chr4.1:29152292-29152311 | None:intergenic | 45.0% | |
| AGTACCCCCTTTACTGAGAT+AGG | - | chr4.1:29157085-29157104 | MS.gene52149:intron | 45.0% | |
| AGTAGTAGTTGGAGGAGTAG+TGG | - | chr4.1:29153867-29153886 | MS.gene52149:intron | 45.0% | |
| AGTGGTGCAAGCTATTACAC+TGG | - | chr4.1:29154604-29154623 | MS.gene52149:intron | 45.0% | |
| ATCCGCTATATTGTTGGCAC+AGG | - | chr4.1:29157819-29157838 | MS.gene52149:CDS | 45.0% | |
| ATGGTGCATGTTTACAGGAG+GGG | + | chr4.1:29157763-29157782 | None:intergenic | 45.0% | |
| CAACTGAGAAGGAACAAGCA+CGG | + | chr4.1:29152391-29152410 | None:intergenic | 45.0% | |
| CCAGAAGGGAATGAGTGAAA+AGG | + | chr4.1:29155481-29155500 | None:intergenic | 45.0% | |
| CTATGGTGCATGTTTACAGG+AGG | + | chr4.1:29157765-29157784 | None:intergenic | 45.0% | |
| CTCCTGTAAACATGCACCAT+AGG | - | chr4.1:29157763-29157782 | MS.gene52149:CDS | 45.0% | |
| GAAATTCCTGTTCAAAGCCG+GGG | - | chr4.1:29156182-29156201 | MS.gene52149:intron | 45.0% | |
| GAAGAATCCAGAACATGGGA+TGG | - | chr4.1:29155335-29155354 | MS.gene52149:intron | 45.0% | |
| GAAGGGAATGAGTGAAAAGG+AGG | + | chr4.1:29155478-29155497 | None:intergenic | 45.0% | |
| GACAGCTAGCAGGTTAGAAT+TGG | + | chr4.1:29157220-29157239 | None:intergenic | 45.0% | |
| GACTGCAACATACCTTCCAT+CGG | + | chr4.1:29154656-29154675 | None:intergenic | 45.0% | |
| GCCAGAAGAATCCAGAACAT+GGG | - | chr4.1:29155331-29155350 | MS.gene52149:intron | 45.0% | |
| GCTTCAAAGGGAAAGAAGGA+TGG | - | chr4.1:29153676-29153695 | MS.gene52149:intron | 45.0% | |
| GGAAATTCCTGTTCAAAGCC+GGG | - | chr4.1:29156181-29156200 | MS.gene52149:intron | 45.0% | |
| GGAAGGAGTAACAACATGCA+GGG | + | chr4.1:29157630-29157649 | None:intergenic | 45.0% | |
| GGAGGACCACTAGTATCATA+TGG | + | chr4.1:29155460-29155479 | None:intergenic | 45.0% | |
| GGAGTGTAACAGAATGGAAG+GGG | + | chr4.1:29157156-29157175 | None:intergenic | 45.0% | |
| GGAGTGTACAACAGAATTGC+AGG | + | chr4.1:29153714-29153733 | None:intergenic | 45.0% | |
| GGCAACTAATGACAAGAGTG+CGG | - | chr4.1:29154123-29154142 | MS.gene52149:intron | 45.0% | |
| GGCCTATCGGATGCAATTAT+CGG | - | chr4.1:29157784-29157803 | MS.gene52149:CDS | 45.0% | |
| GGGTTTGGCATTCTTGATGT+CGG | - | chr4.1:29156203-29156222 | MS.gene52149:intron | 45.0% | |
| GTACCCCCTTTACTGAGATA+GGG | - | chr4.1:29157086-29157105 | MS.gene52149:intron | 45.0% | |
| GTTAGAATTGGAGGAAGGTG+AGG | + | chr4.1:29157208-29157227 | None:intergenic | 45.0% | |
| GTTCCTGAAGATCCTAACCA+TGG | - | chr4.1:29152495-29152514 | MS.gene52149:intron | 45.0% | |
| GTTTACAGGAGGGGGAATAA+AGG | + | chr4.1:29157754-29157773 | None:intergenic | 45.0% | |
| TCAGACTTTGCCAACTGAGA+AGG | + | chr4.1:29152402-29152421 | None:intergenic | 45.0% | |
| TCCTTTCCTATTCTCCAGAG+AGG | - | chr4.1:29156915-29156934 | MS.gene52149:intron | 45.0% | |
| TGACCATGGTTAGGATCTTC+AGG | + | chr4.1:29152501-29152520 | None:intergenic | 45.0% | |
| TGCCAGAAGAATCCAGAACA+TGG | - | chr4.1:29155330-29155349 | MS.gene52149:intron | 45.0% | |
| TGCTGAACTTCCTGGTGATA+TGG | - | chr4.1:29153770-29153789 | MS.gene52149:intron | 45.0% | |
| TGGCAACTTCTACATGACCT+GGG | - | chr4.1:29154684-29154703 | MS.gene52149:intron | 45.0% | |
| ! | AGATAACGGTCTGCATAGTG+TGG | + | chr4.1:29152250-29152269 | None:intergenic | 45.0% |
| ! | CCTTTTCACTCATTCCCTTC+TGG | - | chr4.1:29155478-29155497 | MS.gene52149:intron | 45.0% |
| ! | GAGGAGTGTAACAGAATGGA+AGG | + | chr4.1:29157158-29157177 | None:intergenic | 45.0% |
| ! | GGTATTGGGTCTAAAGAGCA+AGG | + | chr4.1:29157718-29157737 | None:intergenic | 45.0% |
| ! | GTCGTGGTAGGTTTTCTTCT+GGG | - | chr4.1:29153546-29153565 | MS.gene52149:CDS | 45.0% |
| ! | TAATGACAAGAGTGCGGAGA+TGG | - | chr4.1:29154129-29154148 | MS.gene52149:intron | 45.0% |
| ! | TCCCATGTTCTGGATTCTTC+TGG | + | chr4.1:29155335-29155354 | None:intergenic | 45.0% |
| ! | TGTCGTGGTAGGTTTTCTTC+TGG | - | chr4.1:29153545-29153564 | MS.gene52149:CDS | 45.0% |
| ! | TGTTGTCAGCAGCTTTGTCA+CGG | + | chr4.1:29156703-29156722 | None:intergenic | 45.0% |
| !! | AAAGAATAGTGGACAGCACG+AGG | + | chr4.1:29155812-29155831 | None:intergenic | 45.0% |
| !! | AACTGTCTTCTGGTTCTGGA+AGG | + | chr4.1:29152345-29152364 | None:intergenic | 45.0% |
| !! | AGGGAAAGAAGGATGGATTG+TGG | - | chr4.1:29153683-29153702 | MS.gene52149:intron | 45.0% |
| !! | CTTTTTCTCAGCAAAGGCAC+AGG | - | chr4.1:29155400-29155419 | MS.gene52149:intron | 45.0% |
| !! | GGGAAAGAAGGATGGATTGT+GGG | - | chr4.1:29153684-29153703 | MS.gene52149:intron | 45.0% |
| !! | TAGGTTTTCTTCTGGGAACG+AGG | - | chr4.1:29153553-29153572 | MS.gene52149:CDS | 45.0% |
| !! | TTTTCTCAGCAAAGGCACAG+GGG | - | chr4.1:29155402-29155421 | MS.gene52149:intron | 45.0% |
| !!! | GCCACAGATGTCATTTTGGT+TGG | - | chr4.1:29155222-29155241 | MS.gene52149:intron | 45.0% |
| !!! | TTTTTTGAGGCCCATCCTTG+GGG | - | chr4.1:29157561-29157580 | MS.gene52149:intron | 45.0% |
| !! | ATATATAATAAATATTGAAA+CGG | - | chr4.1:29156007-29156026 | MS.gene52149:CDS | 5.0% |
| !!! | AATTAAATTTTACAAAATTT+AGG | - | chr4.1:29152923-29152942 | MS.gene52149:intron | 5.0% |
| AACATGGGATGGAGAGCTGA+TGG | - | chr4.1:29155346-29155365 | MS.gene52149:intron | 50.0% | |
| ACTGTCAATCGATCTCCCGA+TGG | - | chr4.1:29154637-29154656 | MS.gene52149:intron | 50.0% | |
| AGTAAAAGCCTCACCTGACC+AGG | + | chr4.1:29154712-29154731 | None:intergenic | 50.0% | |
| ATGCTGGAGAGAGTTGGGAA+AGG | - | chr4.1:29153736-29153755 | MS.gene52149:intron | 50.0% | |
| CAATTGGAAGGCTGCTGTTC+AGG | - | chr4.1:29154195-29154214 | MS.gene52149:intron | 50.0% | |
| CATCAAGAATGCCAAACCCC+CGG | + | chr4.1:29156202-29156221 | None:intergenic | 50.0% | |
| CGTGCTTGTTCCTTCTCAGT+TGG | - | chr4.1:29152389-29152408 | MS.gene52149:intron | 50.0% | |
| CTGGCAACTGCTCTGTTATG+TGG | + | chr4.1:29155316-29155335 | None:intergenic | 50.0% | |
| CTGTTGTACACTCCTGATGC+TGG | - | chr4.1:29153720-29153739 | MS.gene52149:intron | 50.0% | |
| GAAGGCTGCTGTTCAGGAAT+CGG | - | chr4.1:29154201-29154220 | MS.gene52149:intron | 50.0% | |
| GCAAGGCATGTGCGTATCAA+CGG | + | chr4.1:29157701-29157720 | None:intergenic | 50.0% | |
| GCTAGCTGTCCATGTTGTCA+GGG | - | chr4.1:29157230-29157249 | MS.gene52149:intron | 50.0% | |
| GCTGTTTGCACCCCCTTTAT+TGG | - | chr4.1:29157494-29157513 | MS.gene52149:intron | 50.0% | |
| GCTTTAACCACGAAGCTTCG+AGG | + | chr4.1:29152312-29152331 | None:intergenic | 50.0% | |
| GGCCTATGGTGCATGTTTAC+AGG | + | chr4.1:29157768-29157787 | None:intergenic | 50.0% | |
| GTAGTTGGAGGAGTAGTGGT+AGG | - | chr4.1:29153871-29153890 | MS.gene52149:intron | 50.0% | |
| GTGACAAATGGCTGCAGATG+TGG | + | chr4.1:29157673-29157692 | None:intergenic | 50.0% | |
| GTGGCAACTTCTACATGACC+TGG | - | chr4.1:29154683-29154702 | MS.gene52149:intron | 50.0% | |
| GTTTGCACCCCCTTTATTGG+AGG | - | chr4.1:29157497-29157516 | MS.gene52149:intron | 50.0% | |
| TATGTTGCAGTCTCAAGCCG+TGG | - | chr4.1:29154664-29154683 | MS.gene52149:intron | 50.0% | |
| TCAATCGATCTCCCGATGGA+AGG | - | chr4.1:29154641-29154660 | MS.gene52149:intron | 50.0% | |
| TCCTGATGCTGGAGAGAGTT+GGG | - | chr4.1:29153731-29153750 | MS.gene52149:intron | 50.0% | |
| TCTGCGGATGGTATAGAACG+TGG | + | chr4.1:29153621-29153640 | None:intergenic | 50.0% | |
| TGACAACATGGACAGCTAGC+AGG | + | chr4.1:29157230-29157249 | None:intergenic | 50.0% | |
| TGCTAGCTGTCCATGTTGTC+AGG | - | chr4.1:29157229-29157248 | MS.gene52149:intron | 50.0% | |
| TGCTGTTCAGGAATCGGTGT+CGG | - | chr4.1:29154207-29154226 | MS.gene52149:intron | 50.0% | |
| TGGTGCATGTTTACAGGAGG+GGG | + | chr4.1:29157762-29157781 | None:intergenic | 50.0% | |
| ! | GCCTCTCTGGAGAATAGGAA+AGG | + | chr4.1:29156919-29156938 | None:intergenic | 50.0% |
| ! | GGAAACGGATTTGTCGTGGT+AGG | - | chr4.1:29153534-29153553 | MS.gene52149:CDS | 50.0% |
| !! | CGGTGTCGGCTACTCTTAAT+AGG | - | chr4.1:29154221-29154240 | MS.gene52149:intron | 50.0% |
| !!! | TTTTTGAGGCCCATCCTTGG+GGG | - | chr4.1:29157562-29157581 | MS.gene52149:intron | 50.0% |
| AACCACGAAGCTTCGAGGTC+TGG | + | chr4.1:29152307-29152326 | None:intergenic | 55.0% | |
| ACCACGAAGCTTCGAGGTCT+GGG | + | chr4.1:29152306-29152325 | None:intergenic | 55.0% | |
| AGAATTCGGAGGCTCAGCTC+TGG | - | chr4.1:29157262-29157281 | MS.gene52149:intron | 55.0% | |
| AGCCTCCGAATTCTCAGGGA+CGG | + | chr4.1:29157256-29157275 | None:intergenic | 55.0% | |
| AGCTGAGCCTCCGAATTCTC+AGG | + | chr4.1:29157261-29157280 | None:intergenic | 55.0% | |
| ATGGGATGGAGAGCTGATGG+TGG | - | chr4.1:29155349-29155368 | MS.gene52149:intron | 55.0% | |
| CAGCTCTCCATCCCATGTTC+TGG | + | chr4.1:29155345-29155364 | None:intergenic | 55.0% | |
| CTCCTGATGCTGGAGAGAGT+TGG | - | chr4.1:29153730-29153749 | MS.gene52149:intron | 55.0% | |
| GCAAACAGCTCAACCGAGCT+GGG | + | chr4.1:29157591-29157610 | None:intergenic | 55.0% | |
| GCGGAGATGGTGACAGATGA+AGG | - | chr4.1:29154142-29154161 | MS.gene52149:intron | 55.0% | |
| GCTCTCGTCCCAACAAAACC+AGG | - | chr4.1:29156836-29156855 | MS.gene52149:intron | 55.0% | |
| GCTGAGCCTCCGAATTCTCA+GGG | + | chr4.1:29157260-29157279 | None:intergenic | 55.0% | |
| GGAGTAACAACATGCAGGGC+CGG | + | chr4.1:29157626-29157645 | None:intergenic | 55.0% | |
| GGAGTCTTGCTTCGCTACCT+TGG | - | chr4.1:29157982-29158001 | MS.gene52149:CDS | 55.0% | |
| TCCCAACTCTCTCCAGCATC+AGG | + | chr4.1:29153735-29153754 | None:intergenic | 55.0% | |
| TGCAAACAGCTCAACCGAGC+TGG | + | chr4.1:29157592-29157611 | None:intergenic | 55.0% | |
| TTCTACATGACCTGGGAGCC+TGG | - | chr4.1:29154691-29154710 | MS.gene52149:intron | 55.0% | |
| TTGGAGGAGTAGTGGTAGGC+TGG | - | chr4.1:29153875-29153894 | MS.gene52149:intron | 55.0% | |
| ! | CCACTCAGTGCTGAACTTCC+TGG | - | chr4.1:29153762-29153781 | MS.gene52149:intron | 55.0% |
| ! | CCAGGAAGTTCAGCACTGAG+TGG | + | chr4.1:29153765-29153784 | None:intergenic | 55.0% |
| ! | CTCTGGCTTCTTGTTCGTGG+AGG | - | chr4.1:29155373-29155392 | MS.gene52149:intron | 55.0% |
| ! | GGGAACGAGGCAAACCCTTT+TGG | - | chr4.1:29153566-29153585 | MS.gene52149:CDS | 55.0% |
| ! | GGGGTATCTGATCCGTGAAG+TGG | + | chr4.1:29157137-29157156 | None:intergenic | 55.0% |
| ! | GGTCTCTGGCTTCTTGTTCG+TGG | - | chr4.1:29155370-29155389 | MS.gene52149:intron | 55.0% |
| CAGGGCCGTCCCTGAGAATT+CGG | - | chr4.1:29157248-29157267 | MS.gene52149:intron | 60.0% | |
| CCTGTTCAAAGCCGGGGGTT+TGG | - | chr4.1:29156188-29156207 | MS.gene52149:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+AGG | - | chr4.1:29157600-29157619 | MS.gene52149:intron | 60.0% | |
| TCCCAGACCTCGAAGCTTCG+TGG | - | chr4.1:29152302-29152321 | MS.gene52149:intron | 60.0% | |
| TGTTTGCACCCCCTCAAGGC+CGG | - | chr4.1:29157604-29157623 | MS.gene52149:intron | 60.0% | |
| !! | CCAAACCCCCGGCTTTGAAC+AGG | + | chr4.1:29156191-29156210 | None:intergenic | 60.0% |
| !! | GGAGAGCTGATGGTGGTCTC+TGG | - | chr4.1:29155356-29155375 | MS.gene52149:intron | 60.0% |
| AACATGCAGGGCCGGCCTTG+AGG | + | chr4.1:29157618-29157637 | None:intergenic | 65.0% | |
| ACATGCAGGGCCGGCCTTGA+GGG | + | chr4.1:29157617-29157636 | None:intergenic | 65.0% | |
| CAGGATGAGGCTTGGGCAGC+AGG | - | chr4.1:29156629-29156648 | MS.gene52149:CDS | 65.0% | |
| CAGGGACGGCCCTGACAACA+TGG | + | chr4.1:29157242-29157261 | None:intergenic | 65.0% | |
| CATGACCTGGGAGCCTGGTC+AGG | - | chr4.1:29154696-29154715 | MS.gene52149:intron | 65.0% | |
| GATGAGGCTTGGGCAGCAGG+TGG | - | chr4.1:29156632-29156651 | MS.gene52149:CDS | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+AGG | - | chr4.1:29157251-29157270 | MS.gene52149:intron | 65.0% | |
| TTGAGGCCCATCCTTGGGGG+AGG | - | chr4.1:29157565-29157584 | MS.gene52149:intron | 65.0% | |
| AGCTGGGCCTCCCCCAAGGA+TGG | + | chr4.1:29157575-29157594 | None:intergenic | 70.0% | |
| ATGCAGGGCCGGCCTTGAGG+GGG | + | chr4.1:29157615-29157634 | None:intergenic | 70.0% | |
| CATGCAGGGCCGGCCTTGAG+GGG | + | chr4.1:29157616-29157635 | None:intergenic | 70.0% | |
| CCTCACCTGACCAGGCTCCC+AGG | + | chr4.1:29154704-29154723 | None:intergenic | 70.0% | |
| CCTGGGAGCCTGGTCAGGTG+AGG | - | chr4.1:29154701-29154720 | MS.gene52149:intron | 70.0% | |
| GCTGGGCCTCCCCCAAGGAT+GGG | + | chr4.1:29157574-29157593 | None:intergenic | 70.0% | |
| GCTTGGGCAGCAGGTGGCAG+TGG | - | chr4.1:29156638-29156657 | MS.gene52149:CDS | 70.0% | |
| TCCTTGGGGGAGGCCCAGCT+CGG | - | chr4.1:29157575-29157594 | MS.gene52149:intron | 70.0% | |
| ACCGAGCTGGGCCTCCCCCA+AGG | + | chr4.1:29157579-29157598 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29152210 | 29158008 | 29152210 | ID=MS.gene52149 |
| chr4.1 | mRNA | 29152210 | 29158008 | 29152210 | ID=MS.gene52149.t1;Parent=MS.gene52149 |
| chr4.1 | exon | 29157702 | 29158008 | 29157702 | ID=MS.gene52149.t1.exon1;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29157702 | 29158008 | 29157702 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29156427 | 29156662 | 29156427 | ID=MS.gene52149.t1.exon2;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29156427 | 29156662 | 29156427 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29155976 | 29156106 | 29155976 | ID=MS.gene52149.t1.exon3;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29155976 | 29156106 | 29155976 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29155501 | 29155633 | 29155501 | ID=MS.gene52149.t1.exon4;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29155501 | 29155633 | 29155501 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29154795 | 29154917 | 29154795 | ID=MS.gene52149.t1.exon5;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29154795 | 29154917 | 29154795 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29153980 | 29154054 | 29153980 | ID=MS.gene52149.t1.exon6;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29153980 | 29154054 | 29153980 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29153471 | 29153586 | 29153471 | ID=MS.gene52149.t1.exon7;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29153471 | 29153586 | 29153471 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| chr4.1 | exon | 29152210 | 29152276 | 29152210 | ID=MS.gene52149.t1.exon8;Parent=MS.gene52149.t1 |
| chr4.1 | CDS | 29152210 | 29152276 | 29152210 | ID=cds.MS.gene52149.t1;Parent=MS.gene52149.t1 |
| Gene Sequence |
| Protein sequence |
