Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66305.t1 | XP_003620935.1 | 98.4 | 245 | 4 | 0 | 1 | 245 | 64 | 308 | 2.10E-136 | 495 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66305.t1 | G7KJU8 | 98.4 | 245 | 4 | 0 | 1 | 245 | 64 | 308 | 1.5e-136 | 495.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene66305 | 0.855138 | 7.71E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene66305 | 0.837897 | 3.96E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene66305 | 0.841399 | 4.87E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene66305 | 0.861303 | 1.13E-63 | -1.69E-46 |
| MS.gene049320 | MS.gene66305 | 0.845183 | 4.76E-59 | -1.69E-46 |
| MS.gene04939 | MS.gene66305 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene66305 | 0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene66305 | 0.855136 | 7.72E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene66305 | 0.808757 | 2.65E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene66305 | 0.851345 | 9.43E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene66305 | 0.863354 | 2.64E-64 | -1.69E-46 |
| MS.gene050170 | MS.gene66305 | 0.825453 | 4.65E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene66305 | 0.834495 | 2.90E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene66305 | 0.850281 | 1.88E-60 | -1.69E-46 |
| MS.gene050338 | MS.gene66305 | -0.809872 | 1.53E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene66305 | 0.885165 | 1.03E-71 | -1.69E-46 |
| MS.gene050496 | MS.gene66305 | 0.817128 | 3.87E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene66305 | 0.85089 | 1.27E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene66305 | 0.825134 | 5.53E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene66305 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene66305 | 0.873125 | 1.87E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene66305 | 0.840341 | 9.22E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene66305 | 0.837681 | 4.50E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene66305 | 0.835859 | 1.31E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene66305 | -0.825672 | 4.12E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene66305 | 0.85155 | 8.25E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene66305 | 0.815515 | 8.89E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene66305 | 0.839852 | 1.24E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene66305 | 0.836609 | 8.46E-57 | -1.69E-46 |
| MS.gene050876 | MS.gene66305 | 0.859267 | 4.66E-63 | -1.69E-46 |
| MS.gene050904 | MS.gene66305 | 0.843988 | 9.98E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene66305 | 0.824667 | 7.13E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene66305 | -0.821909 | 3.14E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene66305 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene66305 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene66305 | 0.865332 | 6.37E-65 | -1.69E-46 |
| MS.gene051434 | MS.gene66305 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene66305 | 0.837207 | 5.96E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene66305 | 0.804439 | 2.16E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene66305 | 0.850419 | 1.72E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene66305 | 0.833157 | 6.27E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene66305 | 0.842709 | 2.19E-58 | -1.69E-46 |
| MS.gene051874 | MS.gene66305 | 0.823242 | 1.54E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene66305 | 0.860414 | 2.10E-63 | -1.69E-46 |
| MS.gene052129 | MS.gene66305 | -0.844464 | 7.44E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene66305 | 0.818819 | 1.61E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene66305 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene66305 | 0.822216 | 2.67E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene66305 | 0.804583 | 2.02E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene66305 | -0.818419 | 1.98E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene66305 | 0.837556 | 4.85E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene66305 | 0.876983 | 9.04E-69 | -1.69E-46 |
| MS.gene052872 | MS.gene66305 | 0.893508 | 5.89E-75 | -1.69E-46 |
| MS.gene052916 | MS.gene66305 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene66305 | 0.833001 | 6.85E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene66305 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene053203 | MS.gene66305 | 0.806707 | 7.22E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene66305 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene053284 | MS.gene66305 | 0.84642 | 2.20E-59 | -1.69E-46 |
| MS.gene053285 | MS.gene66305 | 0.839117 | 1.92E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene66305 | 0.834685 | 2.60E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene66305 | 0.806556 | 7.77E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene66305 | 0.849968 | 2.30E-60 | -1.69E-46 |
| MS.gene053776 | MS.gene66305 | -0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene66305 | 0.880479 | 5.31E-70 | -1.69E-46 |
| MS.gene053916 | MS.gene66305 | 0.870471 | 1.42E-66 | -1.69E-46 |
| MS.gene054344 | MS.gene66305 | 0.80561 | 1.23E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene66305 | 0.84186 | 3.68E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene66305 | 0.83763 | 4.64E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene66305 | 0.836065 | 1.16E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene66305 | 0.856707 | 2.68E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene66305 | 0.839817 | 1.26E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene66305 | 0.843963 | 1.01E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene66305 | 0.83041 | 2.98E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene66305 | 0.844195 | 8.79E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene66305 | 0.842897 | 1.95E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene66305 | 0.881968 | 1.54E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene66305 | 0.805599 | 1.24E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene66305 | 0.883291 | 5.08E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene66305 | 0.857876 | 1.21E-62 | -1.69E-46 |
| MS.gene055751 | MS.gene66305 | 0.889013 | 3.54E-73 | -1.69E-46 |
| MS.gene055776 | MS.gene66305 | 0.819988 | 8.70E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene66305 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene66305 | 0.847893 | 8.67E-60 | -1.69E-46 |
| MS.gene056283 | MS.gene66305 | 0.834697 | 2.58E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene66305 | 0.813373 | 2.64E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene66305 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene66305 | 0.841138 | 5.70E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene66305 | 0.822861 | 1.89E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene66305 | 0.841008 | 6.17E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene66305 | 0.843195 | 1.63E-58 | -1.69E-46 |
| MS.gene056856 | MS.gene66305 | -0.824496 | 7.82E-54 | -1.69E-46 |
| MS.gene056857 | MS.gene66305 | -0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene056903 | MS.gene66305 | 0.836899 | 7.14E-57 | -1.69E-46 |
| MS.gene056946 | MS.gene66305 | 0.801187 | 1.01E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene66305 | 0.815524 | 8.84E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene66305 | 0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene66305 | 0.808407 | 3.14E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene66305 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene66305 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene66305 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene66305 | 0.822255 | 2.61E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene66305 | 0.82088 | 5.43E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene66305 | 0.811798 | 5.85E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene66305 | 0.825085 | 5.68E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene66305 | 0.848159 | 7.32E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene66305 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene66305 | 0.874897 | 4.72E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene66305 | 0.859083 | 5.29E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene66305 | 0.863054 | 3.27E-64 | -1.69E-46 |
| MS.gene059022 | MS.gene66305 | 0.854992 | 8.50E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene66305 | 0.880019 | 7.74E-70 | -1.69E-46 |
| MS.gene059079 | MS.gene66305 | 0.856175 | 3.84E-62 | -1.69E-46 |
| MS.gene059102 | MS.gene66305 | -0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene66305 | 0.805248 | 1.46E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene66305 | 0.805454 | 1.32E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene66305 | 0.810729 | 9.97E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene66305 | 0.873707 | 1.19E-67 | -1.69E-46 |
| MS.gene059718 | MS.gene66305 | 0.850109 | 2.10E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene66305 | 0.813872 | 2.05E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene66305 | 0.83004 | 3.67E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene66305 | 0.832575 | 8.74E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene66305 | 0.803713 | 3.06E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene66305 | -0.803169 | 3.96E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene66305 | 0.827772 | 1.30E-54 | -1.69E-46 |
| MS.gene060761 | MS.gene66305 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene66305 | 0.878419 | 2.85E-69 | -1.69E-46 |
| MS.gene060778 | MS.gene66305 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene66305 | 0.819712 | 1.01E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene66305 | 0.822022 | 2.96E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene66305 | 0.851065 | 1.13E-60 | -1.69E-46 |
| MS.gene06111 | MS.gene66305 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene66305 | 0.859287 | 4.59E-63 | -1.69E-46 |
| MS.gene061231 | MS.gene66305 | 0.808062 | 3.72E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66305.t1 | MTR_6g092630 | 98.367 | 245 | 4 | 0 | 1 | 245 | 64 | 308 | 0.0 | 501 |
| MS.gene66305.t1 | MTR_6g092630 | 98.198 | 222 | 4 | 0 | 1 | 222 | 64 | 285 | 2.94e-164 | 456 |
| MS.gene66305.t1 | MTR_7g032900 | 41.026 | 195 | 111 | 1 | 32 | 226 | 53 | 243 | 2.96e-46 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66305.t1 | AT4G29590 | 84.454 | 238 | 37 | 0 | 5 | 242 | 77 | 314 | 1.15e-152 | 427 |
| MS.gene66305.t1 | AT3G01660 | 44.944 | 178 | 94 | 1 | 49 | 226 | 63 | 236 | 1.02e-49 | 164 |
Find 66 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAGAGCAATTCCCCTTTA+AGG | 0.183158 | 6.4:-63593980 | MS.gene66305:CDS |
| TTGGAAATCCTCCTCCTTAA+AGG | 0.202462 | 6.4:+63593966 | None:intergenic |
| TCTTCAATTCTTCTTCATTC+AGG | 0.212937 | 6.4:+63593287 | None:intergenic |
| TACTCCTGGAGTAAGCATTT+TGG | 0.244912 | 6.4:-63593466 | MS.gene66305:CDS |
| ATCACTAACATGTCTGCTTC+TGG | 0.261998 | 6.4:-63594655 | None:intergenic |
| TTACAAAAGCCATTTCTATA+TGG | 0.289442 | 6.4:-63591895 | MS.gene66305:CDS |
| AACTCGTTCTTGCTTGTATC+CGG | 0.295022 | 6.4:+63593321 | None:intergenic |
| TATCTTCAAATGAGAGTTTA+GGG | 0.299222 | 6.4:+63592814 | None:intergenic |
| TTATCTTCAAATGAGAGTTT+AGG | 0.310263 | 6.4:+63592813 | None:intergenic |
| TCCTCCTGCATAATGAAAAT+AGG | 0.331325 | 6.4:+63591832 | None:intergenic |
| ACAAGATTGTCACCTCATTA+TGG | 0.338362 | 6.4:+63592438 | None:intergenic |
| GGATCCGAGTGTCCAGGATT+TGG | 0.359391 | 6.4:+63591304 | None:intergenic |
| TGGAAATCCTCCTCCTTAAA+GGG | 0.361434 | 6.4:+63593967 | None:intergenic |
| GCTTGTATCCGGGTGGAAAA+TGG | 0.376192 | 6.4:+63593332 | None:intergenic |
| CGCTGGTCCCTCTGTTGATC+AGG | 0.393668 | 6.4:-63594599 | MS.gene66305:intron |
| GCCGATCATGTTATGATTGT+TGG | 0.395109 | 6.4:-63591857 | MS.gene66305:CDS |
| ATTTCTATATGGACATCAAC+CGG | 0.418619 | 6.4:-63591884 | MS.gene66305:CDS |
| CAAGAACGAGTTGTAGGATT+AGG | 0.428759 | 6.4:-63593310 | MS.gene66305:CDS |
| TTAGTCAGAGCAGCAATTGC+AGG | 0.435836 | 6.4:+63593519 | None:intergenic |
| TCCTTAAAGGGGAATTGCTC+TGG | 0.443401 | 6.4:+63593979 | None:intergenic |
| CTCATTATGGCCAATCCACC+TGG | 0.458613 | 6.4:+63592451 | None:intergenic |
| ATTGCTAGGTGGGAAAACTT+TGG | 0.475531 | 6.4:+63593488 | None:intergenic |
| ACTCGTTCTTGCTTGTATCC+GGG | 0.477291 | 6.4:+63593322 | None:intergenic |
| GGTTGATGTCCATATAGAAA+TGG | 0.479380 | 6.4:+63591886 | None:intergenic |
| TTTGGATATGTGTAGCAGTT+GGG | 0.481811 | 6.4:-63593448 | MS.gene66305:intron |
| GATACTCAAGCCAGGTGGAT+TGG | 0.490478 | 6.4:-63592461 | MS.gene66305:CDS |
| TATTCTTGCAGAAGCAATGA+AGG | 0.493095 | 6.4:+63594624 | None:intergenic |
| CATAACATGATCGGCATCCC+CGG | 0.501982 | 6.4:+63591865 | None:intergenic |
| AAATGTCAAGAGGCTTTGTC+AGG | 0.502031 | 6.4:+63592500 | None:intergenic |
| GCAATTCCCCTTTAAGGAGG+AGG | 0.507491 | 6.4:-63593974 | MS.gene66305:CDS |
| GTGGATATATCTCCAAATCC+TGG | 0.515525 | 6.4:-63591316 | MS.gene66305:CDS |
| CTCCAGGAGTATTGCTAGGT+GGG | 0.522868 | 6.4:+63593478 | None:intergenic |
| ATCTCCAAATCCTGGACACT+CGG | 0.525670 | 6.4:-63591308 | MS.gene66305:CDS |
| TTTGTAGATATTGAAGAATG+TGG | 0.529167 | 6.4:-63594007 | MS.gene66305:intron |
| AGGAGGATTTGAACCTCCTC+AGG | 0.530086 | 6.4:-63591816 | MS.gene66305:intron |
| TACATAGGATCCGAGTGTCC+AGG | 0.530874 | 6.4:+63591298 | None:intergenic |
| TTCCCACCTAGCAATACTCC+TGG | 0.531377 | 6.4:-63593480 | MS.gene66305:CDS |
| CTAGAGTACACAATGTACAT+AGG | 0.534544 | 6.4:+63591283 | None:intergenic |
| TACAAGCAAGAACGAGTTGT+AGG | 0.540637 | 6.4:-63593316 | MS.gene66305:CDS |
| GAACTTACTCATCATAACGT+TGG | 0.551670 | 6.4:+63593947 | None:intergenic |
| TTTCTATATGGACATCAACC+GGG | 0.564851 | 6.4:-63591883 | MS.gene66305:CDS |
| CAGTTCATATTTCTCTTAAG+CGG | 0.570966 | 6.4:+63591249 | None:intergenic |
| TCCAACAATCATAACATGAT+CGG | 0.579473 | 6.4:+63591856 | None:intergenic |
| ATATCCAAAATGCTTACTCC+AGG | 0.588855 | 6.4:+63593462 | None:intergenic |
| TAGTCAGAGCAGCAATTGCA+GGG | 0.591972 | 6.4:+63593520 | None:intergenic |
| CTTACTCCAGGAGTATTGCT+AGG | 0.592913 | 6.4:+63593474 | None:intergenic |
| ATCTCCATGAAAATGTCAAG+AGG | 0.599849 | 6.4:+63592490 | None:intergenic |
| GTTGCTGCCGTAGGTCCTCA+CGG | 0.600254 | 6.4:-63592865 | MS.gene66305:intron |
| CAGGTGGATTGGCCATAATG+AGG | 0.601130 | 6.4:-63592450 | MS.gene66305:intron |
| AGAAGAATTGAAGAGAAACC+CGG | 0.609792 | 6.4:-63593278 | MS.gene66305:intron |
| ATGAATAGGATACTCAAGCC+AGG | 0.611206 | 6.4:-63592469 | MS.gene66305:CDS |
| GCTTCTGCAAGAATAACCGC+TGG | 0.613481 | 6.4:-63594616 | MS.gene66305:CDS |
| CGTTCTTGCTTGTATCCGGG+TGG | 0.620983 | 6.4:+63593325 | None:intergenic |
| GGAAATCCTCCTCCTTAAAG+GGG | 0.624737 | 6.4:+63593968 | None:intergenic |
| TTTCGATGTCATCACTAATG+TGG | 0.633015 | 6.4:-63592787 | MS.gene66305:intron |
| TCGATGTGTGTTACGAATCG+AGG | 0.637675 | 6.4:+63593546 | None:intergenic |
| AGAGCAATTCCCCTTTAAGG+AGG | 0.643048 | 6.4:-63593977 | MS.gene66305:CDS |
| ACTCCAGGAGTATTGCTAGG+TGG | 0.650096 | 6.4:+63593477 | None:intergenic |
| AGTGAGGGAATTACCTGAGG+AGG | 0.650414 | 6.4:+63591803 | None:intergenic |
| TGACATACCTGATCAACAGA+GGG | 0.666776 | 6.4:+63594592 | None:intergenic |
| TTCTATATGGACATCAACCG+GGG | 0.671373 | 6.4:-63591882 | MS.gene66305:CDS |
| AGATATTGAAGAATGTGGAA+TGG | 0.686438 | 6.4:-63594002 | MS.gene66305:CDS |
| CTGATCAACAGAGGGACCAG+CGG | 0.689416 | 6.4:+63594600 | None:intergenic |
| CTGACATACCTGATCAACAG+AGG | 0.704579 | 6.4:+63594591 | None:intergenic |
| AATAGGATACTCAAGCCAGG+TGG | 0.715241 | 6.4:-63592466 | MS.gene66305:CDS |
| CTTGTACAGTATACTCCGTG+AGG | 0.730572 | 6.4:+63592850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAACTAACAAAAATTAA+GGG | + | chr6.4:63592286-63592305 | None:intergenic | 10.0% |
| !! | AAAAACTAACAAAAATTAAG+GGG | + | chr6.4:63592285-63592304 | None:intergenic | 15.0% |
| !! | GATGTTATTATATCTATTAT+TGG | - | chr6.4:63593917-63593936 | MS.gene66305:intron | 15.0% |
| !! | GTAAAAACTAACAAAAATTA+AGG | + | chr6.4:63592287-63592306 | None:intergenic | 15.0% |
| !! | TATTAATAACTGATCATAAA+GGG | - | chr6.4:63594289-63594308 | MS.gene66305:intron | 15.0% |
| !! | TTAATTAAAAAACAATGACT+TGG | - | chr6.4:63592957-63592976 | MS.gene66305:intron | 15.0% |
| !!! | ATAATTTTTGTTAGATTGTT+TGG | + | chr6.4:63592193-63592212 | None:intergenic | 15.0% |
| !!! | ATATATTTTAACTTCGATAT+TGG | - | chr6.4:63593161-63593180 | MS.gene66305:intron | 15.0% |
| !!! | GATTTTTACATACAAATTTA+TGG | - | chr6.4:63591667-63591686 | MS.gene66305:intron | 15.0% |
| !!! | TTTTCATCTTAAATTACTAT+CGG | + | chr6.4:63591410-63591429 | None:intergenic | 15.0% |
| !! | AAAACTAACAAAAATTAAGG+GGG | + | chr6.4:63592284-63592303 | None:intergenic | 20.0% |
| !! | AAATGAAATGATGAATTTCT+TGG | - | chr6.4:63593287-63593306 | MS.gene66305:CDS | 20.0% |
| !! | ATAAAGGTAGAATTGAAAAT+TGG | - | chr6.4:63591825-63591844 | MS.gene66305:CDS | 20.0% |
| !! | ATAAATCTTTACTTTGCATT+AGG | - | chr6.4:63592551-63592570 | MS.gene66305:intron | 20.0% |
| !! | ATTCTTCAATATCTACAAAA+AGG | + | chr6.4:63591902-63591921 | None:intergenic | 20.0% |
| !! | GTATTAATAACTGATCATAA+AGG | - | chr6.4:63594288-63594307 | MS.gene66305:intron | 20.0% |
| !! | TAACAACGTTATTACAAAAA+GGG | + | chr6.4:63594390-63594409 | None:intergenic | 20.0% |
| !! | TAACATCAAAAACAGATAAA+TGG | + | chr6.4:63593904-63593923 | None:intergenic | 20.0% |
| !! | TTAACAACGTTATTACAAAA+AGG | + | chr6.4:63594391-63594410 | None:intergenic | 20.0% |
| !!! | AGGAAAATTCTGTTTTATAT+AGG | + | chr6.4:63594465-63594484 | None:intergenic | 20.0% |
| !!! | ATTTGTTCATAAGTTGTTTT+CGG | + | chr6.4:63592158-63592177 | None:intergenic | 20.0% |
| ! | AACTATACTTTGGTTATGTT+TGG | - | chr6.4:63591990-63592009 | MS.gene66305:intron | 25.0% |
| ! | AAGTAATTCCAAAATGATAG+CGG | + | chr6.4:63593498-63593517 | None:intergenic | 25.0% |
| ! | AAGTTCAAACAACTATACTT+TGG | - | chr6.4:63591980-63591999 | MS.gene66305:intron | 25.0% |
| ! | AGCAACAATTTCTATCAATA+AGG | + | chr6.4:63593031-63593050 | None:intergenic | 25.0% |
| ! | ATACAAGAATTACAACAACA+TGG | + | chr6.4:63594272-63594291 | None:intergenic | 25.0% |
| ! | CAATCTAGAAAAGTAATCTT+AGG | + | chr6.4:63592876-63592895 | None:intergenic | 25.0% |
| ! | CGATTTCTGTTCTTATTATT+CGG | - | chr6.4:63594359-63594378 | MS.gene66305:intron | 25.0% |
| ! | GACTTATTTCAACTTATCTA+TGG | + | chr6.4:63592217-63592236 | None:intergenic | 25.0% |
| ! | GTATAATTTCACACTGAAAA+GGG | - | chr6.4:63593692-63593711 | MS.gene66305:intron | 25.0% |
| ! | TAATAACGTTGTTAACATAC+TGG | - | chr6.4:63594396-63594415 | MS.gene66305:intron | 25.0% |
| ! | TATCTTCAAATGAGAGTTTA+GGG | + | chr6.4:63593099-63593118 | None:intergenic | 25.0% |
| ! | TGAAATATGCAATGAAAAGA+AGG | + | chr6.4:63591363-63591382 | None:intergenic | 25.0% |
| ! | TGTATAATTTCACACTGAAA+AGG | - | chr6.4:63593691-63593710 | MS.gene66305:intron | 25.0% |
| ! | TTACAAAAGCCATTTCTATA+TGG | - | chr6.4:63594015-63594034 | MS.gene66305:intron | 25.0% |
| ! | TTAGGATACCAAATTCAAAA+TGG | + | chr6.4:63592858-63592877 | None:intergenic | 25.0% |
| ! | TTATCTTCAAATGAGAGTTT+AGG | + | chr6.4:63593100-63593119 | None:intergenic | 25.0% |
| ! | TTGGCTAGATAATCATATTA+AGG | + | chr6.4:63592928-63592947 | None:intergenic | 25.0% |
| ! | TTTGTAGATATTGAAGAATG+TGG | - | chr6.4:63591903-63591922 | MS.gene66305:CDS | 25.0% |
| !! | ATATCTACAAAAAGGTATAG+TGG | + | chr6.4:63591894-63591913 | None:intergenic | 25.0% |
| !! | ATATTTAGTTCGACTTCTAA+AGG | - | chr6.4:63591521-63591540 | MS.gene66305:intron | 25.0% |
| !! | TATCAGAAAATTTTCCCTTT+AGG | - | chr6.4:63592314-63592333 | MS.gene66305:intron | 25.0% |
| !! | TATCTACAAAAAGGTATAGT+GGG | + | chr6.4:63591893-63591912 | None:intergenic | 25.0% |
| !! | TATTTAGTTCGACTTCTAAA+GGG | - | chr6.4:63591522-63591541 | MS.gene66305:intron | 25.0% |
| !! | TGATATTTTCCCATTTTGTT+AGG | - | chr6.4:63594129-63594148 | MS.gene66305:intron | 25.0% |
| !!! | AATTATACACTACTGATTCT+AGG | + | chr6.4:63593680-63593699 | None:intergenic | 25.0% |
| !!! | CATGTAACTTCTTTTTTTGT+AGG | - | chr6.4:63594569-63594588 | MS.gene66305:intron | 25.0% |
| !!! | CTAAGATTACTTTTCTAGAT+TGG | - | chr6.4:63592874-63592893 | MS.gene66305:intron | 25.0% |
| AAAAATTAAGGGGGTAATTG+GGG | + | chr6.4:63592275-63592294 | None:intergenic | 30.0% | |
| AAAATGGGAAAATATCAGTG+AGG | + | chr6.4:63594126-63594145 | None:intergenic | 30.0% | |
| AAATGGGAAAATATCAGTGA+GGG | + | chr6.4:63594125-63594144 | None:intergenic | 30.0% | |
| AAGTTCTTCAAGATAGCTTA+TGG | + | chr6.4:63592124-63592143 | None:intergenic | 30.0% | |
| ACAAAAATTAAGGGGGTAAT+TGG | + | chr6.4:63592277-63592296 | None:intergenic | 30.0% | |
| ACAACAGCACTATAAAATAG+CGG | + | chr6.4:63592825-63592844 | None:intergenic | 30.0% | |
| AGATATTGAAGAATGTGGAA+TGG | - | chr6.4:63591908-63591927 | MS.gene66305:CDS | 30.0% | |
| ATTTCTATATGGACATCAAC+CGG | - | chr6.4:63594026-63594045 | MS.gene66305:intron | 30.0% | |
| CAAAAATTAAGGGGGTAATT+GGG | + | chr6.4:63592276-63592295 | None:intergenic | 30.0% | |
| CAACGCAAATTCAAACATAA+AGG | - | chr6.4:63591809-63591828 | MS.gene66305:intron | 30.0% | |
| CACAATATAACACTGAAACA+CGG | + | chr6.4:63593729-63593748 | None:intergenic | 30.0% | |
| GAAAACTCAATATATCTTGC+AGG | - | chr6.4:63593374-63593393 | MS.gene66305:intron | 30.0% | |
| GAAGTCAAAGTTAGTTGAAT+AGG | + | chr6.4:63593961-63593980 | None:intergenic | 30.0% | |
| GTAAAATATGCAACAAAGAG+AGG | + | chr6.4:63594207-63594226 | None:intergenic | 30.0% | |
| TCCAACAATCATAACATGAT+CGG | + | chr6.4:63594057-63594076 | None:intergenic | 30.0% | |
| TCTTCAATTCTTCTTCATTC+AGG | + | chr6.4:63592626-63592645 | None:intergenic | 30.0% | |
| TGTTTCATGACTACTACTAA+AGG | + | chr6.4:63594485-63594504 | None:intergenic | 30.0% | |
| TTAACTTCGATATTGGAAAC+TGG | - | chr6.4:63593168-63593187 | MS.gene66305:intron | 30.0% | |
| TTGGGGTAAGATTTATGAAA+TGG | + | chr6.4:63592258-63592277 | None:intergenic | 30.0% | |
| ! | ACATTTTCATGGAGATGAAT+AGG | - | chr6.4:63593427-63593446 | MS.gene66305:intron | 30.0% |
| ! | ATTTAGTTCGACTTCTAAAG+GGG | - | chr6.4:63591523-63591542 | MS.gene66305:intron | 30.0% |
| ! | TAAGCAAGTGACAATTTTGT+AGG | + | chr6.4:63593578-63593597 | None:intergenic | 30.0% |
| !! | GGTAGTTACATTTTAGAAAG+AGG | + | chr6.4:63594186-63594205 | None:intergenic | 30.0% |
| !! | TATTTTATAGTGCTGTTGTG+TGG | - | chr6.4:63592826-63592845 | MS.gene66305:CDS | 30.0% |
| AAGAAGTGATTCTTGAAGCT+AGG | - | chr6.4:63591619-63591638 | MS.gene66305:intron | 35.0% | |
| AATGTAATTACATGCGTCGT+CGG | - | chr6.4:63591441-63591460 | MS.gene66305:intron | 35.0% | |
| ACAAGATTGTCACCTCATTA+TGG | + | chr6.4:63593475-63593494 | None:intergenic | 35.0% | |
| ACACCTTTGATAAGATGTGT+AGG | - | chr6.4:63591477-63591496 | MS.gene66305:intron | 35.0% | |
| AGAAGAATTGAAGAGAAACC+CGG | - | chr6.4:63592632-63592651 | MS.gene66305:intron | 35.0% | |
| ATATCCAAAATGCTTACTCC+AGG | + | chr6.4:63592451-63592470 | None:intergenic | 35.0% | |
| ATCTCCATGAAAATGTCAAG+AGG | + | chr6.4:63593423-63593442 | None:intergenic | 35.0% | |
| CTACACTTCAAAATCAATCC+TGG | + | chr6.4:63591549-63591568 | None:intergenic | 35.0% | |
| CTAGAGTACACAATGTACAT+AGG | + | chr6.4:63594630-63594649 | None:intergenic | 35.0% | |
| GAACTTACTCATCATAACGT+TGG | + | chr6.4:63591966-63591985 | None:intergenic | 35.0% | |
| GAAGCTTGTCCTAACAAAAT+GGG | + | chr6.4:63594141-63594160 | None:intergenic | 35.0% | |
| TAGTTGAATAGGACCATAAG+AGG | + | chr6.4:63593950-63593969 | None:intergenic | 35.0% | |
| TATTCTTGCAGAAGCAATGA+AGG | + | chr6.4:63591289-63591308 | None:intergenic | 35.0% | |
| TCCTCCTGCATAATGAAAAT+AGG | + | chr6.4:63594081-63594100 | None:intergenic | 35.0% | |
| TCTATTCTGCTAGAGAAACA+TGG | - | chr6.4:63593005-63593024 | MS.gene66305:intron | 35.0% | |
| TGAAGCTTGTCCTAACAAAA+TGG | + | chr6.4:63594142-63594161 | None:intergenic | 35.0% | |
| TTGTTAAACAGTGTCTACTG+CGG | + | chr6.4:63592758-63592777 | None:intergenic | 35.0% | |
| TTTCGATGTCATCACTAATG+TGG | - | chr6.4:63593123-63593142 | MS.gene66305:intron | 35.0% | |
| TTTCTATATGGACATCAACC+GGG | - | chr6.4:63594027-63594046 | MS.gene66305:intron | 35.0% | |
| TTTGGATATGTGTAGCAGTT+GGG | - | chr6.4:63592462-63592481 | MS.gene66305:CDS | 35.0% | |
| ! | AAAGCCTCTTGACATTTTCA+TGG | - | chr6.4:63593416-63593435 | MS.gene66305:intron | 35.0% |
| ! | AAGCTAGGATTTGTAGCTTT+TGG | - | chr6.4:63591634-63591653 | MS.gene66305:intron | 35.0% |
| ! | AATCTTGTCCGCTATCATTT+TGG | - | chr6.4:63593487-63593506 | MS.gene66305:CDS | 35.0% |
| ! | ACAAAAAGGTATAGTGGGAT+GGG | + | chr6.4:63591888-63591907 | None:intergenic | 35.0% |
| ! | GCGTTGACAAGAATTGATTT+AGG | + | chr6.4:63591795-63591814 | None:intergenic | 35.0% |
| ! | GGATCCTATTTTCATTATGC+AGG | - | chr6.4:63594074-63594093 | MS.gene66305:intron | 35.0% |
| ! | GGTTGATGTCCATATAGAAA+TGG | + | chr6.4:63594027-63594046 | None:intergenic | 35.0% |
| ! | TACAAAAAGGTATAGTGGGA+TGG | + | chr6.4:63591889-63591908 | None:intergenic | 35.0% |
| ! | TCCTATTTTCATTATGCAGG+AGG | - | chr6.4:63594077-63594096 | MS.gene66305:intron | 35.0% |
| ! | TTTTGGATATGTGTAGCAGT+TGG | - | chr6.4:63592461-63592480 | MS.gene66305:CDS | 35.0% |
| !! | GGTTGTAGCCATTTTGAATT+TGG | - | chr6.4:63592847-63592866 | MS.gene66305:CDS | 35.0% |
| !!! | ACTTCTTTTTTTGTAGGCTG+TGG | - | chr6.4:63594575-63594594 | MS.gene66305:intron | 35.0% |
| AACTCGTTCTTGCTTGTATC+CGG | + | chr6.4:63592592-63592611 | None:intergenic | 40.0% | |
| AAGTGTCCAGAAAAGTTCTG+AGG | + | chr6.4:63593643-63593662 | None:intergenic | 40.0% | |
| ATAGAAATTGTTGCTGCCGT+AGG | - | chr6.4:63593036-63593055 | MS.gene66305:intron | 40.0% | |
| ATGAATAGGATACTCAAGCC+AGG | - | chr6.4:63593441-63593460 | MS.gene66305:intron | 40.0% | |
| ATTGCTAGGTGGGAAAACTT+TGG | + | chr6.4:63592425-63592444 | None:intergenic | 40.0% | |
| CAACATGGATGCATCAGAAA+TGG | + | chr6.4:63594257-63594276 | None:intergenic | 40.0% | |
| CAAGAACGAGTTGTAGGATT+AGG | - | chr6.4:63592600-63592619 | MS.gene66305:intron | 40.0% | |
| GCACCTACACATCTTATCAA+AGG | + | chr6.4:63591483-63591502 | None:intergenic | 40.0% | |
| GCAGAATCTGATGACCTAAA+GGG | + | chr6.4:63592331-63592350 | None:intergenic | 40.0% | |
| GCCGATCATGTTATGATTGT+TGG | - | chr6.4:63594053-63594072 | MS.gene66305:intron | 40.0% | |
| GCTTCAAGAATCACTTCTTG+AGG | + | chr6.4:63591618-63591637 | None:intergenic | 40.0% | |
| GTACAAGTGATGCATGCTAT+TGG | - | chr6.4:63593190-63593209 | MS.gene66305:intron | 40.0% | |
| GTGGATATATCTCCAAATCC+TGG | - | chr6.4:63594594-63594613 | MS.gene66305:intron | 40.0% | |
| TACAAGCAAGAACGAGTTGT+AGG | - | chr6.4:63592594-63592613 | MS.gene66305:intron | 40.0% | |
| TATTGGTCCTGTACCTCTTA+TGG | - | chr6.4:63593934-63593953 | MS.gene66305:intron | 40.0% | |
| TGACATACCTGATCAACAGA+GGG | + | chr6.4:63591321-63591340 | None:intergenic | 40.0% | |
| TGCAGAATCTGATGACCTAA+AGG | + | chr6.4:63592332-63592351 | None:intergenic | 40.0% | |
| TGGAAATCCTCCTCCTTAAA+GGG | + | chr6.4:63591946-63591965 | None:intergenic | 40.0% | |
| TTCTATATGGACATCAACCG+GGG | - | chr6.4:63594028-63594047 | MS.gene66305:intron | 40.0% | |
| TTGGAAATCCTCCTCCTTAA+AGG | + | chr6.4:63591947-63591966 | None:intergenic | 40.0% | |
| ! | AAATGTCAAGAGGCTTTGTC+AGG | + | chr6.4:63593413-63593432 | None:intergenic | 40.0% |
| ! | AATAGGACCATAAGAGGTAC+AGG | + | chr6.4:63593944-63593963 | None:intergenic | 40.0% |
| ! | ATCCATCCTCAGAACTTTTC+TGG | - | chr6.4:63593634-63593653 | MS.gene66305:intron | 40.0% |
| ! | TACTCCTGGAGTAAGCATTT+TGG | - | chr6.4:63592444-63592463 | MS.gene66305:intron | 40.0% |
| AACCCTCTTTCTGTGCTATG+TGG | - | chr6.4:63592661-63592680 | MS.gene66305:intron | 45.0% | |
| AATAGGATACTCAAGCCAGG+TGG | - | chr6.4:63593444-63593463 | MS.gene66305:intron | 45.0% | |
| ACCCAAGCTCGATTACTCTT+TGG | - | chr6.4:63593799-63593818 | MS.gene66305:intron | 45.0% | |
| ACTCGTTCTTGCTTGTATCC+GGG | + | chr6.4:63592591-63592610 | None:intergenic | 45.0% | |
| AGAAAGAGGGTTGTCTTACC+GGG | + | chr6.4:63592653-63592672 | None:intergenic | 45.0% | |
| AGTTACATGAGCCTCAGCAT+TGG | + | chr6.4:63594558-63594577 | None:intergenic | 45.0% | |
| ATCAGAAATGGCTAGGTGTG+TGG | + | chr6.4:63594245-63594264 | None:intergenic | 45.0% | |
| ATCAGTGAGGGAATTACCTG+AGG | + | chr6.4:63594113-63594132 | None:intergenic | 45.0% | |
| ATCTCCAAATCCTGGACACT+CGG | - | chr6.4:63594602-63594621 | MS.gene66305:CDS | 45.0% | |
| CAGAAAGAGGGTTGTCTTAC+CGG | + | chr6.4:63592654-63592673 | None:intergenic | 45.0% | |
| CTGACATACCTGATCAACAG+AGG | + | chr6.4:63591322-63591341 | None:intergenic | 45.0% | |
| CTTGTACAGTATACTCCGTG+AGG | + | chr6.4:63593063-63593082 | None:intergenic | 45.0% | |
| GCCAAAGAGTAATCGAGCTT+GGG | + | chr6.4:63593803-63593822 | None:intergenic | 45.0% | |
| GGAAATCCTCCTCCTTAAAG+GGG | + | chr6.4:63591945-63591964 | None:intergenic | 45.0% | |
| GTGACATTGTACCAATGCTG+AGG | - | chr6.4:63594544-63594563 | MS.gene66305:intron | 45.0% | |
| TAGTCAGAGCAGCAATTGCA+GGG | + | chr6.4:63592393-63592412 | None:intergenic | 45.0% | |
| TCCTTAAAGGGGAATTGCTC+TGG | + | chr6.4:63591934-63591953 | None:intergenic | 45.0% | |
| TCGATGTGTGTTACGAATCG+AGG | + | chr6.4:63592367-63592386 | None:intergenic | 45.0% | |
| TGCCAAAGAGTAATCGAGCT+TGG | + | chr6.4:63593804-63593823 | None:intergenic | 45.0% | |
| TGCCACATAGCACAGAAAGA+GGG | + | chr6.4:63592666-63592685 | None:intergenic | 45.0% | |
| TGGATGCATCAGAAATGGCT+AGG | + | chr6.4:63594252-63594271 | None:intergenic | 45.0% | |
| TTAGTCAGAGCAGCAATTGC+AGG | + | chr6.4:63592394-63592413 | None:intergenic | 45.0% | |
| TTGCCACATAGCACAGAAAG+AGG | + | chr6.4:63592667-63592686 | None:intergenic | 45.0% | |
| ! | AGAGCAATTCCCCTTTAAGG+AGG | - | chr6.4:63591933-63591952 | MS.gene66305:intron | 45.0% |
| ! | CTGCGGCTTTATAGCATTGT+AGG | + | chr6.4:63592741-63592760 | None:intergenic | 45.0% |
| !! | CTTACTCCAGGAGTATTGCT+AGG | + | chr6.4:63592439-63592458 | None:intergenic | 45.0% |
| !! | GTCCAGAAAAGTTCTGAGGA+TGG | + | chr6.4:63593639-63593658 | None:intergenic | 45.0% |
| !!! | TTTTAATTAAATTTAAGTAT+TGG | + | chr6.4:63592947-63592966 | None:intergenic | 5.0% |
| AAATGGCTAGGTGTGTGGAG+AGG | + | chr6.4:63594240-63594259 | None:intergenic | 50.0% | |
| AAGACTTCGATAGCGCATCG+TGG | - | chr6.4:63592776-63592795 | MS.gene66305:intron | 50.0% | |
| AATTACATGCGTCGTCGGTG+TGG | - | chr6.4:63591446-63591465 | MS.gene66305:intron | 50.0% | |
| AGGAGGATTTGAACCTCCTC+AGG | - | chr6.4:63594094-63594113 | MS.gene66305:intron | 50.0% | |
| AGTGAGGGAATTACCTGAGG+AGG | + | chr6.4:63594110-63594129 | None:intergenic | 50.0% | |
| CATAACATGATCGGCATCCC+CGG | + | chr6.4:63594048-63594067 | None:intergenic | 50.0% | |
| CTCATTATGGCCAATCCACC+TGG | + | chr6.4:63593462-63593481 | None:intergenic | 50.0% | |
| GATACTCAAGCCAGGTGGAT+TGG | - | chr6.4:63593449-63593468 | MS.gene66305:CDS | 50.0% | |
| GCCAGAGCAATTCCCCTTTA+AGG | - | chr6.4:63591930-63591949 | MS.gene66305:intron | 50.0% | |
| GCTTCTGCAAGAATAACCGC+TGG | - | chr6.4:63591294-63591313 | MS.gene66305:CDS | 50.0% | |
| GCTTGTATCCGGGTGGAAAA+TGG | + | chr6.4:63592581-63592600 | None:intergenic | 50.0% | |
| GTATACTCCGTGAGGACCTA+CGG | + | chr6.4:63593055-63593074 | None:intergenic | 50.0% | |
| TACATAGGATCCGAGTGTCC+AGG | + | chr6.4:63594615-63594634 | None:intergenic | 50.0% | |
| TTCCCACCTAGCAATACTCC+TGG | - | chr6.4:63592430-63592449 | MS.gene66305:intron | 50.0% | |
| ! | GCAATTCCCCTTTAAGGAGG+AGG | - | chr6.4:63591936-63591955 | MS.gene66305:intron | 50.0% |
| ! | GGTATAGTGGGATGGGACAA+AGG | + | chr6.4:63591881-63591900 | None:intergenic | 50.0% |
| !! | ACTCCAGGAGTATTGCTAGG+TGG | + | chr6.4:63592436-63592455 | None:intergenic | 50.0% |
| !! | CAGGTGGATTGGCCATAATG+AGG | - | chr6.4:63593460-63593479 | MS.gene66305:CDS | 50.0% |
| !! | CTCCAGGAGTATTGCTAGGT+GGG | + | chr6.4:63592435-63592454 | None:intergenic | 50.0% |
| !! | TAGGTCAGCCATTTTCCACC+CGG | - | chr6.4:63592570-63592589 | MS.gene66305:intron | 50.0% |
| CGTTCTTGCTTGTATCCGGG+TGG | + | chr6.4:63592588-63592607 | None:intergenic | 55.0% | |
| CTGATCAACAGAGGGACCAG+CGG | + | chr6.4:63591313-63591332 | None:intergenic | 55.0% | |
| GGATCCGAGTGTCCAGGATT+TGG | + | chr6.4:63594609-63594628 | None:intergenic | 55.0% | |
| ! | GTTCGACTTCTAAAGGGGCC+AGG | - | chr6.4:63591528-63591547 | MS.gene66305:intron | 55.0% |
| CGCTGGTCCCTCTGTTGATC+AGG | - | chr6.4:63591311-63591330 | MS.gene66305:CDS | 60.0% | |
| GTTGCTGCCGTAGGTCCTCA+CGG | - | chr6.4:63593045-63593064 | MS.gene66305:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63591264 | 63594668 | 63591264 | ID=MS.gene66305 |
| chr6.4 | mRNA | 63591264 | 63594668 | 63591264 | ID=MS.gene66305.t1;Parent=MS.gene66305 |
| chr6.4 | exon | 63594600 | 63594668 | 63594600 | ID=MS.gene66305.t1.exon1;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63594600 | 63594668 | 63594600 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63593955 | 63594022 | 63593955 | ID=MS.gene66305.t1.exon2;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63593955 | 63594022 | 63593955 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63593449 | 63593596 | 63593449 | ID=MS.gene66305.t1.exon3;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63593449 | 63593596 | 63593449 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63593279 | 63593359 | 63593279 | ID=MS.gene66305.t1.exon4;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63593279 | 63593359 | 63593279 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63592788 | 63592874 | 63592788 | ID=MS.gene66305.t1.exon5;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63592788 | 63592874 | 63592788 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63592451 | 63592536 | 63592451 | ID=MS.gene66305.t1.exon6;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63592451 | 63592536 | 63592451 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63591817 | 63591937 | 63591817 | ID=MS.gene66305.t1.exon7;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63591817 | 63591937 | 63591817 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| chr6.4 | exon | 63591264 | 63591341 | 63591264 | ID=MS.gene66305.t1.exon8;Parent=MS.gene66305.t1 |
| chr6.4 | CDS | 63591264 | 63591341 | 63591264 | ID=cds.MS.gene66305.t1;Parent=MS.gene66305.t1 |
| Gene Sequence |
| Protein sequence |
