Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71829.t1 | RHN82426.1 | 95.3 | 257 | 12 | 0 | 1 | 257 | 1 | 257 | 1.90E-129 | 471.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71829.t1 | P31165 | 87.2 | 257 | 31 | 2 | 3 | 257 | 2 | 258 | 2.8e-116 | 419.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71829.t1 | A0A396JW85 | 95.3 | 257 | 12 | 0 | 1 | 257 | 1 | 257 | 1.4e-129 | 471.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene71829 | 0.801923 | 7.16E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene71829 | 0.834273 | 3.30E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene71829 | 0.864078 | 1.57E-64 | -1.69E-46 |
| MS.gene049427 | MS.gene71829 | 0.882221 | 1.25E-70 | -1.69E-46 |
| MS.gene049491 | MS.gene71829 | 0.88121 | 2.90E-70 | -1.69E-46 |
| MS.gene049614 | MS.gene71829 | 0.852888 | 3.44E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene71829 | 0.856234 | 3.69E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene71829 | 0.849207 | 3.75E-60 | -1.69E-46 |
| MS.gene049758 | MS.gene71829 | 0.837461 | 5.13E-57 | -1.69E-46 |
| MS.gene049760 | MS.gene71829 | 0.85727 | 1.83E-62 | -1.69E-46 |
| MS.gene049805 | MS.gene71829 | 0.81827 | 2.14E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene71829 | 0.912124 | 2.79E-83 | -1.69E-46 |
| MS.gene050099 | MS.gene71829 | 0.844103 | 9.30E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene71829 | 0.877211 | 7.54E-69 | -1.69E-46 |
| MS.gene050397 | MS.gene71829 | 0.845494 | 3.92E-59 | -1.69E-46 |
| MS.gene050404 | MS.gene71829 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene71829 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene050432 | MS.gene71829 | 0.874371 | 7.12E-68 | -1.69E-46 |
| MS.gene050464 | MS.gene71829 | 0.821553 | 3.80E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene71829 | 0.84866 | 5.32E-60 | -1.69E-46 |
| MS.gene05053 | MS.gene71829 | 0.806 | 1.02E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene71829 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene71829 | 0.883108 | 5.93E-71 | -1.69E-46 |
| MS.gene050770 | MS.gene71829 | 0.885428 | 8.20E-72 | -1.69E-46 |
| MS.gene050783 | MS.gene71829 | 0.84335 | 1.48E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene71829 | 0.838907 | 2.18E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene71829 | 0.909783 | 3.89E-82 | -1.69E-46 |
| MS.gene05105 | MS.gene71829 | 0.802169 | 6.37E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene71829 | 0.817334 | 3.48E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene71829 | 0.817935 | 2.55E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene71829 | 0.903022 | 5.32E-79 | -1.69E-46 |
| MS.gene051582 | MS.gene71829 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene71829 | 0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene71829 | 0.816425 | 5.57E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene71829 | 0.809981 | 1.45E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene71829 | 0.803102 | 4.09E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene71829 | 0.902343 | 1.07E-78 | -1.69E-46 |
| MS.gene052178 | MS.gene71829 | 0.846482 | 2.11E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene71829 | 0.846612 | 1.95E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene71829 | 0.811709 | 6.11E-51 | -1.69E-46 |
| MS.gene052290 | MS.gene71829 | 0.881344 | 2.59E-70 | -1.69E-46 |
| MS.gene052293 | MS.gene71829 | 0.807358 | 5.26E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene71829 | 0.881894 | 1.64E-70 | -1.69E-46 |
| MS.gene052322 | MS.gene71829 | 0.832046 | 1.18E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene71829 | 0.911439 | 6.08E-83 | -1.69E-46 |
| MS.gene052340 | MS.gene71829 | 0.826669 | 2.39E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene71829 | 0.85032 | 1.83E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene71829 | 0.801622 | 8.26E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene71829 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene71829 | 0.814292 | 1.66E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene71829 | 0.828433 | 9.02E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene71829 | 0.846098 | 2.69E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene71829 | 0.827696 | 1.36E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene71829 | 0.812689 | 3.74E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene71829 | 0.847332 | 1.24E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene71829 | 0.889284 | 2.78E-73 | -1.69E-46 |
| MS.gene053557 | MS.gene71829 | 0.829633 | 4.62E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene71829 | 0.851086 | 1.12E-60 | -1.69E-46 |
| MS.gene053907 | MS.gene71829 | 0.837903 | 3.95E-57 | -1.69E-46 |
| MS.gene053915 | MS.gene71829 | 0.803612 | 3.21E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene71829 | 0.81977 | 9.75E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene71829 | 0.867749 | 1.09E-65 | -1.69E-46 |
| MS.gene054376 | MS.gene71829 | 0.899906 | 1.25E-77 | -1.69E-46 |
| MS.gene05455 | MS.gene71829 | 0.828629 | 8.08E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene71829 | 0.896292 | 4.24E-76 | -1.69E-46 |
| MS.gene054803 | MS.gene71829 | 0.898965 | 3.16E-77 | -1.69E-46 |
| MS.gene054804 | MS.gene71829 | 0.899095 | 2.78E-77 | -1.69E-46 |
| MS.gene054955 | MS.gene71829 | 0.820279 | 7.46E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene71829 | 0.816866 | 4.43E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene71829 | 0.87128 | 7.71E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene71829 | 0.913237 | 7.77E-84 | -1.69E-46 |
| MS.gene055390 | MS.gene71829 | 0.876739 | 1.10E-68 | -1.69E-46 |
| MS.gene055397 | MS.gene71829 | 0.88626 | 3.99E-72 | -1.69E-46 |
| MS.gene055412 | MS.gene71829 | 0.865237 | 6.83E-65 | -1.69E-46 |
| MS.gene055422 | MS.gene71829 | 0.891091 | 5.45E-74 | -1.69E-46 |
| MS.gene055428 | MS.gene71829 | 0.886763 | 2.58E-72 | -1.69E-46 |
| MS.gene055499 | MS.gene71829 | 0.878561 | 2.54E-69 | -1.69E-46 |
| MS.gene055533 | MS.gene71829 | 0.802875 | 4.56E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene71829 | 0.825719 | 4.02E-54 | -1.69E-46 |
| MS.gene055712 | MS.gene71829 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene71829 | 0.880421 | 5.57E-70 | -1.69E-46 |
| MS.gene05592 | MS.gene71829 | 0.820835 | 5.56E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene71829 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene71829 | 0.844089 | 9.38E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene71829 | 0.820677 | 6.05E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene71829 | 0.885326 | 8.95E-72 | -1.69E-46 |
| MS.gene056612 | MS.gene71829 | 0.870499 | 1.39E-66 | -1.69E-46 |
| MS.gene056659 | MS.gene71829 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene056664 | MS.gene71829 | 0.802867 | 4.58E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene71829 | 0.849234 | 3.69E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene71829 | 0.800508 | 1.39E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene71829 | 0.883303 | 5.03E-71 | -1.69E-46 |
| MS.gene05702 | MS.gene71829 | 0.866648 | 2.45E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene71829 | 0.813971 | 1.95E-51 | -1.69E-46 |
| MS.gene057123 | MS.gene71829 | 0.868276 | 7.37E-66 | -1.69E-46 |
| MS.gene057124 | MS.gene71829 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene71829 | 0.875032 | 4.24E-68 | -1.69E-46 |
| MS.gene057146 | MS.gene71829 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene71829 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene71829 | 0.87147 | 6.67E-67 | -1.69E-46 |
| MS.gene05733 | MS.gene71829 | 0.8428 | 2.07E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene71829 | 0.814901 | 1.22E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene71829 | 0.841256 | 5.31E-58 | -1.69E-46 |
| MS.gene057450 | MS.gene71829 | 0.809038 | 2.30E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene71829 | 0.85217 | 5.50E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene71829 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene71829 | 0.867079 | 1.78E-65 | -1.69E-46 |
| MS.gene05811 | MS.gene71829 | 0.840566 | 8.05E-58 | -1.69E-46 |
| MS.gene058233 | MS.gene71829 | 0.87849 | 2.69E-69 | -1.69E-46 |
| MS.gene058276 | MS.gene71829 | 0.823386 | 1.42E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene71829 | 0.883039 | 6.28E-71 | -1.69E-46 |
| MS.gene058365 | MS.gene71829 | 0.845593 | 3.69E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene71829 | 0.928948 | 1.40E-92 | -1.69E-46 |
| MS.gene058787 | MS.gene71829 | 0.827124 | 1.86E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene71829 | 0.801508 | 8.71E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene71829 | 0.816707 | 4.81E-52 | -1.69E-46 |
| MS.gene058993 | MS.gene71829 | 0.831909 | 1.28E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene71829 | 0.853428 | 2.40E-61 | -1.69E-46 |
| MS.gene059326 | MS.gene71829 | 0.856213 | 3.75E-62 | -1.69E-46 |
| MS.gene059342 | MS.gene71829 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene71829 | 0.83847 | 2.82E-57 | -1.69E-46 |
| MS.gene059536 | MS.gene71829 | 0.860814 | 1.59E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene71829 | 0.877893 | 4.36E-69 | -1.69E-46 |
| MS.gene05959 | MS.gene71829 | 0.85354 | 2.23E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene71829 | 0.885872 | 5.59E-72 | -1.69E-46 |
| MS.gene059688 | MS.gene71829 | 0.860823 | 1.58E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene71829 | 0.874884 | 4.76E-68 | -1.69E-46 |
| MS.gene059695 | MS.gene71829 | 0.869 | 4.30E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene71829 | 0.857056 | 2.12E-62 | -1.69E-46 |
| MS.gene05984 | MS.gene71829 | 0.820768 | 5.76E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene71829 | 0.817793 | 2.74E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene71829 | 0.901053 | 3.95E-78 | -1.69E-46 |
| MS.gene059960 | MS.gene71829 | 0.911208 | 7.88E-83 | -1.69E-46 |
| MS.gene060005 | MS.gene71829 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene71829 | 0.828295 | 9.74E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene71829 | 0.847588 | 1.05E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene71829 | 0.844558 | 7.02E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene71829 | 0.845321 | 4.37E-59 | -1.69E-46 |
| MS.gene06090 | MS.gene71829 | 0.847337 | 1.23E-59 | -1.69E-46 |
| MS.gene061041 | MS.gene71829 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene71829 | 0.865319 | 6.44E-65 | -1.69E-46 |
| MS.gene061051 | MS.gene71829 | -0.849239 | 3.67E-60 | -1.69E-46 |
| MS.gene061112 | MS.gene71829 | 0.812636 | 3.84E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene71829 | 0.878634 | 2.40E-69 | -1.69E-46 |
| MS.gene061265 | MS.gene71829 | 0.810818 | 9.54E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71829.t1 | MTR_1g110750 | 94.942 | 257 | 13 | 0 | 1 | 257 | 1 | 257 | 8.14e-178 | 489 |
| MS.gene71829.t1 | MTR_1g031890 | 32.639 | 144 | 88 | 5 | 78 | 218 | 74 | 211 | 1.08e-11 | 63.9 |
| MS.gene71829.t1 | MTR_1g085490 | 32.639 | 144 | 88 | 5 | 78 | 218 | 74 | 211 | 1.09e-11 | 63.9 |
| MS.gene71829.t1 | MTR_4g118060 | 32.639 | 144 | 88 | 5 | 78 | 218 | 74 | 211 | 1.23e-11 | 63.5 |
| MS.gene71829.t1 | MTR_1g031890 | 32.639 | 144 | 88 | 5 | 78 | 218 | 74 | 211 | 1.30e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71829.t1 | AT3G25920 | 70.464 | 237 | 58 | 2 | 17 | 243 | 24 | 258 | 2.42e-111 | 322 |
Find 66 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGTTTCGGTTGGACAATT+TGG | 0.209684 | 1.3:+75493331 | MS.gene71829:CDS |
| CAAGGAGCGAGTTGTGGTTT+TGG | 0.247810 | 1.3:+75493413 | MS.gene71829:CDS |
| TCCTGCAATTCCTCTAAGTT+TGG | 0.258498 | 1.3:-75493519 | None:intergenic |
| CTTCTCTTATTCCTGTTTCC+TGG | 0.269459 | 1.3:+75493082 | MS.gene71829:CDS |
| CGGTTTCGGTTGGACAATTT+GGG | 0.284648 | 1.3:+75493332 | MS.gene71829:CDS |
| AGCAGCTGCTTCTCGCTTCT+TGG | 0.291577 | 1.3:-75498112 | None:intergenic |
| TTGCATATTTAAACAGAATC+TGG | 0.313222 | 1.3:-75498141 | None:intergenic |
| CGACGATTGCCCAAACTTAG+AGG | 0.316218 | 1.3:+75493509 | MS.gene71829:CDS |
| AGATTGATGTGGACATATTT+CGG | 0.336463 | 1.3:-75494513 | None:intergenic |
| CTCTCTCGCTTCTCCATTCA+AGG | 0.354654 | 1.3:+75493110 | MS.gene71829:CDS |
| CTCTTTCTTGAACCTGGTTG+TGG | 0.358662 | 1.3:-75493356 | None:intergenic |
| TTAAGACATGGACATAGATA+TGG | 0.367880 | 1.3:-75493230 | None:intergenic |
| TGTTCCATCACTGTGATTCC+TGG | 0.369456 | 1.3:+75498027 | MS.gene71829:CDS |
| CCCAAACTTAGAGGAATTGC+AGG | 0.376415 | 1.3:+75493518 | MS.gene71829:CDS |
| TGATTCCTGGCCGTAAGAAA+TGG | 0.380224 | 1.3:+75498040 | MS.gene71829:CDS |
| CCTGCAATTCCTCTAAGTTT+GGG | 0.397805 | 1.3:-75493518 | None:intergenic |
| CTCCTTCGCTGATGTGGAAA+AGG | 0.406202 | 1.3:-75497986 | None:intergenic |
| GGAAATAGAAATACCTTGAA+TGG | 0.411477 | 1.3:-75493123 | None:intergenic |
| TTTGCTCTCTTTCTTGAACC+TGG | 0.419614 | 1.3:-75493362 | None:intergenic |
| TAATAAGGCTGCTTCTGCTT+CGG | 0.436199 | 1.3:+75493286 | MS.gene71829:CDS |
| AAGAAAGAGAGCAAAGAGAA+AGG | 0.443452 | 1.3:+75493370 | MS.gene71829:CDS |
| AGAGAGGGTAACCAGGAAAC+AGG | 0.445145 | 1.3:-75493093 | None:intergenic |
| ATGGCTTAACCCATTTCTTA+CGG | 0.452810 | 1.3:-75498050 | None:intergenic |
| AACCAGCAGGTGAAAATGTT+CGG | 0.456863 | 1.3:+75493312 | MS.gene71829:CDS |
| AGAAGGGGAAGAGGTGTCTC+TGG | 0.461261 | 1.3:+75494563 | MS.gene71829:CDS |
| CAGGTGAAAATGTTCGGTTT+CGG | 0.473561 | 1.3:+75493318 | MS.gene71829:CDS |
| GACAATTTGGGTCCACAACC+AGG | 0.479320 | 1.3:+75493344 | MS.gene71829:CDS |
| AGAAAGAGAGCAAAGAGAAA+GGG | 0.484644 | 1.3:+75493371 | MS.gene71829:CDS |
| TGAAAATGTTCGGTTTCGGT+TGG | 0.487169 | 1.3:+75493322 | MS.gene71829:CDS |
| AGAAGCGAGAGAGGGTAACC+AGG | 0.489358 | 1.3:-75493100 | None:intergenic |
| AAGTTTCTCCTTCGCTGATG+TGG | 0.489671 | 1.3:-75497992 | None:intergenic |
| TTAACCCATTTCTTACGGCC+AGG | 0.492636 | 1.3:-75498045 | None:intergenic |
| GAAATATGTCCACATCAATC+TGG | 0.495258 | 1.3:+75494515 | MS.gene71829:CDS |
| GGAACGGAAACTTCTATTGA+AGG | 0.496485 | 1.3:+75494626 | MS.gene71829:CDS |
| AGTTTCCGTTCCCTTCCTGA+TGG | 0.497026 | 1.3:-75494615 | None:intergenic |
| ACATAATAAGGTATGCATGC+TGG | 0.501018 | 1.3:+75494486 | MS.gene71829:intron |
| TCTGCTTCGGTGAAACCAGC+AGG | 0.507750 | 1.3:+75493299 | MS.gene71829:CDS |
| AGAGCAAAGAGAAAGGGAAG+AGG | 0.509714 | 1.3:+75493377 | MS.gene71829:CDS |
| GATTCCTGGCCGTAAGAAAT+GGG | 0.511756 | 1.3:+75498041 | MS.gene71829:CDS |
| GAAGATGCTGGATTTCAAGA+AGG | 0.525528 | 1.3:+75494546 | MS.gene71829:CDS |
| AAGGAGAAACTTGAGTCTGC+TGG | 0.526406 | 1.3:+75498003 | MS.gene71829:CDS |
| CTGGTAGACATAGAAGATGC+TGG | 0.527862 | 1.3:+75494534 | MS.gene71829:CDS |
| AAACGTGTGATTAACCCATC+AGG | 0.531753 | 1.3:+75494600 | MS.gene71829:CDS |
| AAGATGCTGGATTTCAAGAA+GGG | 0.537870 | 1.3:+75494547 | MS.gene71829:CDS |
| GTTTCCGTTCCCTTCCTGAT+GGG | 0.539207 | 1.3:-75494614 | None:intergenic |
| AGAGGTATTGCCGCAGGACA+AGG | 0.557884 | 1.3:+75493395 | MS.gene71829:CDS |
| TTGGGCAATCGTCGATAAAG+TGG | 0.564517 | 1.3:-75493500 | None:intergenic |
| AAGAAGTTGACAATAAAAGC+TGG | 0.573815 | 1.3:+75497961 | MS.gene71829:CDS |
| GCAGGACAAGGAGCGAGTTG+TGG | 0.577933 | 1.3:+75493407 | MS.gene71829:CDS |
| TGGATTTCAAGAAGGGGAAG+AGG | 0.578835 | 1.3:+75494554 | MS.gene71829:CDS |
| GTAGGGAAATGTGAAAACCT+TGG | 0.584114 | 1.3:+75493199 | MS.gene71829:intron |
| AAGGGAAGAGGTATTGCCGC+AGG | 0.588347 | 1.3:+75493389 | MS.gene71829:CDS |
| CTTGAATGGAGAAGCGAGAG+AGG | 0.590843 | 1.3:-75493109 | None:intergenic |
| GGTGTCTCTGGAGACACTGA+CGG | 0.598433 | 1.3:+75494575 | MS.gene71829:CDS |
| GTGTGATTAACCCATCAGGA+AGG | 0.611754 | 1.3:+75494604 | MS.gene71829:CDS |
| TTGAATGGAGAAGCGAGAGA+GGG | 0.622388 | 1.3:-75493108 | None:intergenic |
| CTTCTTGGCGAAGTATTCGT+CGG | 0.627986 | 1.3:-75498097 | None:intergenic |
| ACGGCCAGGAATCACAGTGA+TGG | 0.630385 | 1.3:-75498031 | None:intergenic |
| TGTGATTAACCCATCAGGAA+GGG | 0.634878 | 1.3:+75494605 | MS.gene71829:CDS |
| TCTGGACCTGGTATCATGAG+AGG | 0.634957 | 1.3:+75493458 | MS.gene71829:CDS |
| TCAAAACCTCTCATGATACC+AGG | 0.646172 | 1.3:-75493464 | None:intergenic |
| CTATGTCTACCAGATTGATG+TGG | 0.650882 | 1.3:-75494524 | None:intergenic |
| TTAACCCATCAGGAAGGGAA+CGG | 0.658603 | 1.3:+75494610 | MS.gene71829:CDS |
| AGATGCTGGATTTCAAGAAG+GGG | 0.662527 | 1.3:+75494548 | MS.gene71829:CDS |
| ACAACTCGCTCCTTGTCCTG+CGG | 0.686055 | 1.3:-75493405 | None:intergenic |
| AAACTTAGAGGAATTGCAGG+AGG | 0.696930 | 1.3:+75493521 | MS.gene71829:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAAATGTACATTTA+GGG | - | chr1.3:75495378-75495397 | None:intergenic | 10.0% |
| !!! | TACACAATATATTTTTAAAA+AGG | + | chr1.3:75497876-75497895 | MS.gene71829:intron | 10.0% |
| !!! | TTTTAATTAAATGTACATTT+AGG | - | chr1.3:75495379-75495398 | None:intergenic | 10.0% |
| !! | AATTTCAACAATAAAACAAT+AGG | - | chr1.3:75493578-75493597 | None:intergenic | 15.0% |
| !! | GAATTATATTAGGATAATTT+AGG | + | chr1.3:75493963-75493982 | MS.gene71829:intron | 15.0% |
| !!! | AAAAGCAATTATTTTATGAA+AGG | + | chr1.3:75494354-75494373 | MS.gene71829:intron | 15.0% |
| !!! | GATTATTTTAGATTAACTAT+AGG | - | chr1.3:75495171-75495190 | None:intergenic | 15.0% |
| !!! | TATTAATCTTTTTCACTTTA+AGG | + | chr1.3:75496780-75496799 | MS.gene71829:intron | 15.0% |
| !!! | TCTAATATCATTTAGAATTT+TGG | + | chr1.3:75497245-75497264 | MS.gene71829:intron | 15.0% |
| !! | AAAGAGTTAAAGTTAGTTAA+TGG | + | chr1.3:75495028-75495047 | MS.gene71829:intron | 20.0% |
| !! | AAATATCAATTTCTGTCTAT+TGG | + | chr1.3:75495396-75495415 | MS.gene71829:intron | 20.0% |
| !! | AACAAAACATCGTAAAAAAA+GGG | - | chr1.3:75493891-75493910 | None:intergenic | 20.0% |
| !! | ACCAGATAGAATATTTAAAA+GGG | + | chr1.3:75495817-75495836 | MS.gene71829:intron | 20.0% |
| !! | GAGAATTCAAGAATATAAAA+TGG | + | chr1.3:75495964-75495983 | MS.gene71829:intron | 20.0% |
| !! | TAACAAAACATCGTAAAAAA+AGG | - | chr1.3:75493892-75493911 | None:intergenic | 20.0% |
| !! | TACCAGATAGAATATTTAAA+AGG | + | chr1.3:75495816-75495835 | MS.gene71829:intron | 20.0% |
| !! | TATGAGAAAATGAAATGAAA+TGG | - | chr1.3:75493147-75493166 | None:intergenic | 20.0% |
| !! | TTTCATATTATGCCTTTAAT+CGG | + | chr1.3:75494870-75494889 | MS.gene71829:intron | 20.0% |
| !!! | ACCATTGATTTTATATTTGT+AGG | + | chr1.3:75493181-75493200 | MS.gene71829:intron | 20.0% |
| !!! | ATTTCTAAAGTGATATTTAG+CGG | + | chr1.3:75497517-75497536 | MS.gene71829:intron | 20.0% |
| !!! | CCATTGATTTTATATTTGTA+GGG | + | chr1.3:75493182-75493201 | MS.gene71829:intron | 20.0% |
| !!! | CTTTGAAAATCTACATATTA+GGG | - | chr1.3:75494143-75494162 | None:intergenic | 20.0% |
| !!! | GAAAATAATGTTTTCAACTA+TGG | + | chr1.3:75493615-75493634 | MS.gene71829:intron | 20.0% |
| !!! | GGATTTTGTTGAATTATATT+AGG | + | chr1.3:75493953-75493972 | MS.gene71829:intron | 20.0% |
| !!! | TATTTTCAACAAGAGAAATA+AGG | + | chr1.3:75495207-75495226 | MS.gene71829:intron | 20.0% |
| !!! | TCTTTGAAAATCTACATATT+AGG | - | chr1.3:75494144-75494163 | None:intergenic | 20.0% |
| !!! | TTCACTTTTAAAAACAAATG+AGG | + | chr1.3:75494756-75494775 | MS.gene71829:intron | 20.0% |
| ! | AAAAGGAAAAGATGTCTTTA+TGG | + | chr1.3:75496144-75496163 | MS.gene71829:intron | 25.0% |
| ! | AAAGGAAAAGATGTCTTTAT+GGG | + | chr1.3:75496145-75496164 | MS.gene71829:intron | 25.0% |
| ! | AATAAAAAAGATTACCGAAC+AGG | + | chr1.3:75496069-75496088 | MS.gene71829:intron | 25.0% |
| ! | AGAAGTCTTTCTTGATATAT+GGG | - | chr1.3:75494802-75494821 | None:intergenic | 25.0% |
| ! | ATAAAAAAGATTACCGAACA+GGG | + | chr1.3:75496070-75496089 | MS.gene71829:intron | 25.0% |
| ! | CAATTTCAAACAACTTATAC+AGG | + | chr1.3:75497759-75497778 | MS.gene71829:intron | 25.0% |
| ! | CATTTCAAGATGTCAATAAA+GGG | - | chr1.3:75494181-75494200 | None:intergenic | 25.0% |
| ! | CCCTACAAATATAAAATCAA+TGG | - | chr1.3:75493185-75493204 | None:intergenic | 25.0% |
| ! | CTCTTGTTGAAAATATGTTT+AGG | - | chr1.3:75495202-75495221 | None:intergenic | 25.0% |
| ! | GTATATCATTGAAGATTATG+TGG | + | chr1.3:75495446-75495465 | MS.gene71829:intron | 25.0% |
| ! | GTTGTCTATAAATAAGAAGA+GGG | + | chr1.3:75495233-75495252 | MS.gene71829:intron | 25.0% |
| ! | TAGTCTATATACTACCAAAT+GGG | + | chr1.3:75493754-75493773 | MS.gene71829:intron | 25.0% |
| ! | TCATTAGTAGGAAAAAACAA+TGG | + | chr1.3:75494030-75494049 | MS.gene71829:intron | 25.0% |
| ! | TGATGTGTCATAATGTTATT+AGG | + | chr1.3:75495676-75495695 | MS.gene71829:intron | 25.0% |
| ! | TGTAAAAGTTGGAATATAAG+AGG | + | chr1.3:75494994-75495013 | MS.gene71829:intron | 25.0% |
| ! | TGTCAGATTCTAAACATATT+TGG | - | chr1.3:75496376-75496395 | None:intergenic | 25.0% |
| ! | TGTTGTCTATAAATAAGAAG+AGG | + | chr1.3:75495232-75495251 | MS.gene71829:intron | 25.0% |
| ! | TTAGTCTATATACTACCAAA+TGG | + | chr1.3:75493753-75493772 | MS.gene71829:intron | 25.0% |
| ! | TTATTAACAACAAAAACACG+AGG | - | chr1.3:75493272-75493291 | None:intergenic | 25.0% |
| ! | TTGACATTGTAATTCAATGA+TGG | + | chr1.3:75493651-75493670 | MS.gene71829:intron | 25.0% |
| ! | TTTCATATGAAATAGGTGTT+GGG | + | chr1.3:75495571-75495590 | MS.gene71829:intron | 25.0% |
| !! | AAAGTTAGTTAATGGATGTT+GGG | + | chr1.3:75495036-75495055 | MS.gene71829:intron | 25.0% |
| !! | AATAATGTTTTCAACTATGG+TGG | + | chr1.3:75493618-75493637 | MS.gene71829:intron | 25.0% |
| !! | AATATTTTCCTGAGTTTATG+AGG | - | chr1.3:75497722-75497741 | None:intergenic | 25.0% |
| !! | ACCCTTTTAAATATTCTATC+TGG | - | chr1.3:75495821-75495840 | None:intergenic | 25.0% |
| !! | GAATTTGAAACTGTAAAAGT+TGG | + | chr1.3:75494983-75495002 | MS.gene71829:intron | 25.0% |
| !! | TAAAGTTAGTTAATGGATGT+TGG | + | chr1.3:75495035-75495054 | MS.gene71829:intron | 25.0% |
| !! | TAAGTTCAAACGCAATATTT+TGG | + | chr1.3:75494942-75494961 | MS.gene71829:intron | 25.0% |
| !! | TTAAAAGGGTTTTTCTTGAA+AGG | + | chr1.3:75495831-75495850 | MS.gene71829:intron | 25.0% |
| !! | TTCGTAGATATGAAAAGTAT+TGG | - | chr1.3:75497485-75497504 | None:intergenic | 25.0% |
| !! | TTTTCATATGAAATAGGTGT+TGG | + | chr1.3:75495570-75495589 | MS.gene71829:intron | 25.0% |
| !!! | AATTCTATTTCTAAGTTGGT+TGG | - | chr1.3:75496999-75497018 | None:intergenic | 25.0% |
| !!! | CTTGTATTTTTAATAGAGCT+GGG | + | chr1.3:75496945-75496964 | MS.gene71829:intron | 25.0% |
| !!! | CTTTTAAAAACAAATGAGGA+TGG | + | chr1.3:75494760-75494779 | MS.gene71829:intron | 25.0% |
| !!! | GAGGTATTTTCATATGAAAT+AGG | + | chr1.3:75495564-75495583 | MS.gene71829:intron | 25.0% |
| !!! | TCGTGTTTTTGTTGTTAATA+AGG | + | chr1.3:75493271-75493290 | MS.gene71829:CDS | 25.0% |
| !!! | TCTTGTATTTTTAATAGAGC+TGG | + | chr1.3:75496944-75496963 | MS.gene71829:intron | 25.0% |
| !!! | TCTTGTCATTTTAGTATAGT+CGG | + | chr1.3:75495279-75495298 | MS.gene71829:intron | 25.0% |
| !!! | TCTTTTTCACTTTAAGGATA+AGG | + | chr1.3:75496786-75496805 | MS.gene71829:intron | 25.0% |
| !!! | TTGCTTTTGAAATGAAATCA+TGG | - | chr1.3:75494342-75494361 | None:intergenic | 25.0% |
| !!! | TTTTGAAATGAAATCATGGA+AGG | - | chr1.3:75494338-75494357 | None:intergenic | 25.0% |
| AAATGAGTGAAGAAAAGAGT+CGG | + | chr1.3:75495919-75495938 | MS.gene71829:intron | 30.0% | |
| AAATGGAGAAGTAAGAAGAA+AGG | + | chr1.3:75495981-75496000 | MS.gene71829:intron | 30.0% | |
| AACATGTAAGACAACAACTA+AGG | - | chr1.3:75494692-75494711 | None:intergenic | 30.0% | |
| AACCAAAATTCTCCGATTAA+AGG | - | chr1.3:75494885-75494904 | None:intergenic | 30.0% | |
| AACTACTACATCAAGCTAAA+AGG | + | chr1.3:75496699-75496718 | MS.gene71829:intron | 30.0% | |
| AACTTTATTCACGATAGACA+AGG | - | chr1.3:75494836-75494855 | None:intergenic | 30.0% | |
| AAGAAGAAAGGTGAAAGAAA+TGG | + | chr1.3:75495993-75496012 | MS.gene71829:intron | 30.0% | |
| AAGAAGTTGACAATAAAAGC+TGG | + | chr1.3:75497961-75497980 | MS.gene71829:CDS | 30.0% | |
| AAGACTTCCTTTATAAGAAG+AGG | + | chr1.3:75496560-75496579 | MS.gene71829:intron | 30.0% | |
| AATGAAATCATGGAAGGATA+TGG | - | chr1.3:75494332-75494351 | None:intergenic | 30.0% | |
| ACATGTAAGACAACAACTAA+GGG | - | chr1.3:75494691-75494710 | None:intergenic | 30.0% | |
| ACTACTACATCAAGCTAAAA+GGG | + | chr1.3:75496700-75496719 | MS.gene71829:intron | 30.0% | |
| ACTTCTAATTAGTCATGCAT+TGG | + | chr1.3:75497803-75497822 | MS.gene71829:intron | 30.0% | |
| ACTTTAACTCTTTCAACCAA+CGG | - | chr1.3:75495021-75495040 | None:intergenic | 30.0% | |
| ACTTTATTCACGATAGACAA+GGG | - | chr1.3:75494835-75494854 | None:intergenic | 30.0% | |
| AGAAGAGCTCTTTCAAATAA+TGG | - | chr1.3:75497694-75497713 | None:intergenic | 30.0% | |
| AGATTGATGTGGACATATTT+CGG | - | chr1.3:75494516-75494535 | None:intergenic | 30.0% | |
| AGGAAGAGAAATTTAGGTAT+TGG | - | chr1.3:75494253-75494272 | None:intergenic | 30.0% | |
| ATACCCAACAAAATACCAAA+TGG | - | chr1.3:75495729-75495748 | None:intergenic | 30.0% | |
| ATGACTTTCAAATGTGATGT+AGG | - | chr1.3:75494077-75494096 | None:intergenic | 30.0% | |
| ATTATTTGAAAGAGCTCTTC+TGG | + | chr1.3:75497693-75497712 | MS.gene71829:intron | 30.0% | |
| ATTTCTGTCTATTGGTATCA+AGG | + | chr1.3:75495404-75495423 | MS.gene71829:intron | 30.0% | |
| CAAACATGCATAAACTTCTA+GGG | + | chr1.3:75497148-75497167 | MS.gene71829:intron | 30.0% | |
| CAGAAGTCTTTCTTGATATA+TGG | - | chr1.3:75494803-75494822 | None:intergenic | 30.0% | |
| CAGAGTTTCACAATTTGTAA+TGG | - | chr1.3:75496268-75496287 | None:intergenic | 30.0% | |
| CCATTTCAAGATGTCAATAA+AGG | - | chr1.3:75494182-75494201 | None:intergenic | 30.0% | |
| CCTTTATTGACATCTTGAAA+TGG | + | chr1.3:75494179-75494198 | MS.gene71829:intron | 30.0% | |
| CTTCTAATTAGTCATGCATT+GGG | + | chr1.3:75497804-75497823 | MS.gene71829:intron | 30.0% | |
| GAAGTCTTTCTTGATATATG+GGG | - | chr1.3:75494801-75494820 | None:intergenic | 30.0% | |
| GATATATACAACAGCATATC+CGG | - | chr1.3:75494121-75494140 | None:intergenic | 30.0% | |
| GGAAATAGAAATACCTTGAA+TGG | - | chr1.3:75493126-75493145 | None:intergenic | 30.0% | |
| GTATCTACCTCTTCTTATAA+AGG | - | chr1.3:75496570-75496589 | None:intergenic | 30.0% | |
| TAAAAAAGATTACCGAACAG+GGG | + | chr1.3:75496071-75496090 | MS.gene71829:intron | 30.0% | |
| TACCCAACAAAATACCAAAT+GGG | - | chr1.3:75495728-75495747 | None:intergenic | 30.0% | |
| TATAAATAAGAAGAGGGCTT+AGG | + | chr1.3:75495239-75495258 | MS.gene71829:intron | 30.0% | |
| TATATATAAGAAGAGGCTGA+AGG | + | chr1.3:75496914-75496933 | MS.gene71829:intron | 30.0% | |
| TGCTCTACATGAATAATACT+TGG | - | chr1.3:75496602-75496621 | None:intergenic | 30.0% | |
| TGCTGTCTATATATAAGAAG+AGG | + | chr1.3:75496907-75496926 | MS.gene71829:intron | 30.0% | |
| TGTTGGATTGTATTTCAAAG+AGG | + | chr1.3:75496492-75496511 | MS.gene71829:intron | 30.0% | |
| TTAAGACATGGACATAGATA+TGG | - | chr1.3:75493233-75493252 | None:intergenic | 30.0% | |
| TTAGGGAAAATTTCCTTGTA+TGG | - | chr1.3:75495361-75495380 | None:intergenic | 30.0% | |
| TTATTGTCTGAAGAGAATCA+TGG | + | chr1.3:75494205-75494224 | MS.gene71829:intron | 30.0% | |
| TTTCTTTCATTCTTTGTCGT+AGG | + | chr1.3:75494379-75494398 | MS.gene71829:intron | 30.0% | |
| TTTCTTTGAGCCTTACAAAA+CGG | - | chr1.3:75495107-75495126 | None:intergenic | 30.0% | |
| ! | AACCCATTTGGTATTTTGTT+GGG | + | chr1.3:75495723-75495742 | MS.gene71829:intron | 30.0% |
| ! | AATAAGAATAAAGGCACACA+TGG | + | chr1.3:75495473-75495492 | MS.gene71829:intron | 30.0% |
| ! | AATATAATTTGCCCGCTAAT+AGG | + | chr1.3:75493862-75493881 | MS.gene71829:intron | 30.0% |
| ! | AATTTAGGATCCTACTGTTA+GGG | + | chr1.3:75493978-75493997 | MS.gene71829:intron | 30.0% |
| ! | ATTGTTTTCATGATGTCTAG+AGG | + | chr1.3:75494722-75494741 | MS.gene71829:intron | 30.0% |
| ! | TAACCCATTTGGTATTTTGT+TGG | + | chr1.3:75495722-75495741 | MS.gene71829:intron | 30.0% |
| ! | TAATTTAGGATCCTACTGTT+AGG | + | chr1.3:75493977-75493996 | MS.gene71829:intron | 30.0% |
| ! | TCTAGCATCATGAATTTTGT+TGG | + | chr1.3:75497583-75497602 | MS.gene71829:intron | 30.0% |
| !! | AAATTTAGGTATTGGAAGCT+TGG | - | chr1.3:75494245-75494264 | None:intergenic | 30.0% |
| !! | AATAATAGTTTGTTGTGCTC+TGG | + | chr1.3:75497908-75497927 | MS.gene71829:intron | 30.0% |
| !! | ACACATTACTTGTTGGTTTA+TGG | + | chr1.3:75494650-75494669 | MS.gene71829:intron | 30.0% |
| !! | GAGCAATTCTATTTCTAAGT+TGG | - | chr1.3:75497003-75497022 | None:intergenic | 30.0% |
| !! | TAAACATGAAGATGGATTGT+TGG | + | chr1.3:75496475-75496494 | MS.gene71829:intron | 30.0% |
| !!! | ATTCGCTGAATTTTAAGACA+TGG | - | chr1.3:75493245-75493264 | None:intergenic | 30.0% |
| !!! | CTTGTCATTTTAGTATAGTC+GGG | + | chr1.3:75495280-75495299 | MS.gene71829:intron | 30.0% |
| !!! | TTGTCATTTTAGTATAGTCG+GGG | + | chr1.3:75495281-75495300 | MS.gene71829:intron | 30.0% |
| AAAAAAGGGCAACCTATTAG+CGG | - | chr1.3:75493877-75493896 | None:intergenic | 35.0% | |
| AAAGAAACTGTAGCATGTTC+TGG | + | chr1.3:75497543-75497562 | MS.gene71829:intron | 35.0% | |
| AAGAAAGAGAGCAAAGAGAA+AGG | + | chr1.3:75493370-75493389 | MS.gene71829:CDS | 35.0% | |
| AAGATGCTGGATTTCAAGAA+GGG | + | chr1.3:75494547-75494566 | MS.gene71829:CDS | 35.0% | |
| AATCTGACAACTTCAACCTT+TGG | + | chr1.3:75496387-75496406 | MS.gene71829:intron | 35.0% | |
| ACATAATAAGGTATGCATGC+TGG | + | chr1.3:75494486-75494505 | MS.gene71829:intron | 35.0% | |
| ACATATAATACGCTACCAAG+TGG | + | chr1.3:75497635-75497654 | MS.gene71829:intron | 35.0% | |
| ACTATTGGAGGAGATGAATT+TGG | + | chr1.3:75495886-75495905 | MS.gene71829:intron | 35.0% | |
| AGAAAGAGAGCAAAGAGAAA+GGG | + | chr1.3:75493371-75493390 | MS.gene71829:CDS | 35.0% | |
| ATCAATTTGACATACAGGTC+AGG | + | chr1.3:75495780-75495799 | MS.gene71829:intron | 35.0% | |
| ATCTCTTCTTACACAACACT+TGG | + | chr1.3:75493545-75493564 | MS.gene71829:intron | 35.0% | |
| ATCTGACAACTTCAACCTTT+GGG | + | chr1.3:75496388-75496407 | MS.gene71829:intron | 35.0% | |
| ATGGCTTAACCCATTTCTTA+CGG | - | chr1.3:75498053-75498072 | None:intergenic | 35.0% | |
| ATTGATGAGAGGCAGATTAA+TGG | + | chr1.3:75496535-75496554 | MS.gene71829:intron | 35.0% | |
| CAAGAAAGACTTCTGATATG+AGG | + | chr1.3:75494808-75494827 | MS.gene71829:intron | 35.0% | |
| CAAGGATCAATTTGACATAC+AGG | + | chr1.3:75495775-75495794 | MS.gene71829:intron | 35.0% | |
| CATATAATACGCTACCAAGT+GGG | + | chr1.3:75497636-75497655 | MS.gene71829:intron | 35.0% | |
| CTAACAGAAGTGGAATGAAA+AGG | + | chr1.3:75496127-75496146 | MS.gene71829:intron | 35.0% | |
| CTACTTGTAGCATCATTAGT+AGG | + | chr1.3:75494018-75494037 | MS.gene71829:intron | 35.0% | |
| GAAATATGTCCACATCAATC+TGG | + | chr1.3:75494515-75494534 | MS.gene71829:CDS | 35.0% | |
| GAAATGGAGTGAAATGACTA+TGG | + | chr1.3:75496009-75496028 | MS.gene71829:intron | 35.0% | |
| GAACTGAGGAAGAGAAATTT+AGG | - | chr1.3:75494259-75494278 | None:intergenic | 35.0% | |
| GAAGGATATGGAAGAATAAG+GGG | - | chr1.3:75494320-75494339 | None:intergenic | 35.0% | |
| GCAAACATGCATAAACTTCT+AGG | + | chr1.3:75497147-75497166 | MS.gene71829:intron | 35.0% | |
| GCATTCTTTACCTTACAAAC+TGG | - | chr1.3:75497290-75497309 | None:intergenic | 35.0% | |
| GGAAAACTACAGAACTTCAA+AGG | - | chr1.3:75495340-75495359 | None:intergenic | 35.0% | |
| GGAAGGATATGGAAGAATAA+GGG | - | chr1.3:75494321-75494340 | None:intergenic | 35.0% | |
| GTATATGCATAAATCTCGCT+TGG | + | chr1.3:75494421-75494440 | MS.gene71829:intron | 35.0% | |
| GTCAAGCATAATAAGAACTG+AGG | - | chr1.3:75494273-75494292 | None:intergenic | 35.0% | |
| GTGAAGGAAAATAACATGCT+CGG | + | chr1.3:75497090-75497109 | MS.gene71829:intron | 35.0% | |
| GTGAGGAAGTAATTTCAGTT+GGG | + | chr1.3:75495508-75495527 | MS.gene71829:intron | 35.0% | |
| TAGCATCATAATGCTTCACA+TGG | + | chr1.3:75493921-75493940 | MS.gene71829:intron | 35.0% | |
| TCATGAAGTATGCCTATTAC+AGG | + | chr1.3:75494093-75494112 | MS.gene71829:intron | 35.0% | |
| TCTCTTCTTACACAACACTT+GGG | + | chr1.3:75493546-75493565 | MS.gene71829:intron | 35.0% | |
| TGAAGAGAATCATGGCATTA+TGG | + | chr1.3:75494213-75494232 | MS.gene71829:intron | 35.0% | |
| TGAGGAAGTAATTTCAGTTG+GGG | + | chr1.3:75495509-75495528 | MS.gene71829:intron | 35.0% | |
| TGAGTTAAGCTTGTAGTTTG+TGG | + | chr1.3:75496856-75496875 | MS.gene71829:intron | 35.0% | |
| TGCTTCACATGGAGTTTAAA+TGG | + | chr1.3:75493932-75493951 | MS.gene71829:intron | 35.0% | |
| TGGAAGGATATGGAAGAATA+AGG | - | chr1.3:75494322-75494341 | None:intergenic | 35.0% | |
| TGTCACATCATTGTTGAATG+CGG | + | chr1.3:75496203-75496222 | MS.gene71829:intron | 35.0% | |
| TGTGGCGTGAATAAGAATAA+AGG | + | chr1.3:75495464-75495483 | MS.gene71829:intron | 35.0% | |
| TTCATGTTTAGCAACAGCAT+AGG | - | chr1.3:75496465-75496484 | None:intergenic | 35.0% | |
| TTGATACACCTGTTAGTTGA+AGG | + | chr1.3:75496829-75496848 | MS.gene71829:intron | 35.0% | |
| ! | AAAAGTGTGCTCTTGTACAA+AGG | + | chr1.3:75496234-75496253 | MS.gene71829:intron | 35.0% |
| ! | AAGGGTTTTTCTTGAAAGGA+CGG | + | chr1.3:75495835-75495854 | MS.gene71829:intron | 35.0% |
| ! | ATAATCGAGTCCGTTTTGTA+AGG | + | chr1.3:75495094-75495113 | MS.gene71829:intron | 35.0% |
| ! | CTTTTCATTCCACTTCTGTT+AGG | - | chr1.3:75496129-75496148 | None:intergenic | 35.0% |
| ! | GAGTTAAGCTTGTAGTTTGT+GGG | + | chr1.3:75496857-75496876 | MS.gene71829:intron | 35.0% |
| ! | GTTCTGTAGTTTTCCATACA+AGG | + | chr1.3:75495345-75495364 | MS.gene71829:intron | 35.0% |
| ! | TGAAGGTACACATTACTTGT+TGG | + | chr1.3:75494643-75494662 | MS.gene71829:intron | 35.0% |
| ! | TGCCTTTAATCGGAGAATTT+TGG | + | chr1.3:75494880-75494899 | MS.gene71829:intron | 35.0% |
| ! | TGTGAAGCATTATGATGCTA+CGG | - | chr1.3:75493921-75493940 | None:intergenic | 35.0% |
| ! | TTCTTGATATATGGGGTACT+AGG | - | chr1.3:75494794-75494813 | None:intergenic | 35.0% |
| ! | TTTTCCTTCACAAGGCTTAT+AGG | - | chr1.3:75497081-75497100 | None:intergenic | 35.0% |
| !! | ATTTCTAAGTTGGTTGGAAG+AGG | - | chr1.3:75496993-75497012 | None:intergenic | 35.0% |
| !! | GTTCAAACGCAATATTTTGG+TGG | + | chr1.3:75494945-75494964 | MS.gene71829:intron | 35.0% |
| !! | TAGATATGGTTTTGCTACCA+AGG | - | chr1.3:75493219-75493238 | None:intergenic | 35.0% |
| !! | TTTCTAAGTTGGTTGGAAGA+GGG | - | chr1.3:75496992-75497011 | None:intergenic | 35.0% |
| !! | TTTGTACAAGAGCACACTTT+TGG | - | chr1.3:75496235-75496254 | None:intergenic | 35.0% |
| !!! | GCATGTTATTTTCCTTCACA+AGG | - | chr1.3:75497089-75497108 | None:intergenic | 35.0% |
| !!! | TGTCATTTTAGTATAGTCGG+GGG | + | chr1.3:75495282-75495301 | MS.gene71829:intron | 35.0% |
| AAAAAGGGCAACCTATTAGC+GGG | - | chr1.3:75493876-75493895 | None:intergenic | 40.0% | |
| AAACAAAGCTTGTCCTTCCA+TGG | - | chr1.3:75495626-75495645 | None:intergenic | 40.0% | |
| AAACGTGTGATTAACCCATC+AGG | + | chr1.3:75494600-75494619 | MS.gene71829:CDS | 40.0% | |
| AAACTTAGAGGAATTGCAGG+AGG | + | chr1.3:75493521-75493540 | MS.gene71829:CDS | 40.0% | |
| AAAGAGTTCTTTGGCATGAC+TGG | + | chr1.3:75496654-75496673 | MS.gene71829:intron | 40.0% | |
| AAATGACTATGGCATGGAAG+TGG | + | chr1.3:75496020-75496039 | MS.gene71829:intron | 40.0% | |
| AACCAGCAGGTGAAAATGTT+CGG | + | chr1.3:75493312-75493331 | MS.gene71829:CDS | 40.0% | |
| AAGAATGCCCAAGCTCTATT+TGG | + | chr1.3:75497302-75497321 | MS.gene71829:intron | 40.0% | |
| AAGAGTTCTTTGGCATGACT+GGG | + | chr1.3:75496655-75496674 | MS.gene71829:intron | 40.0% | |
| AGAATGCCCAAGCTCTATTT+GGG | + | chr1.3:75497303-75497322 | MS.gene71829:intron | 40.0% | |
| AGAGCAACACAAAGTTTGAG+AGG | + | chr1.3:75496616-75496635 | MS.gene71829:intron | 40.0% | |
| AGAGGTCAAAAATCTCGATC+TGG | + | chr1.3:75493440-75493459 | MS.gene71829:CDS | 40.0% | |
| AGATGCTGGATTTCAAGAAG+GGG | + | chr1.3:75494548-75494567 | MS.gene71829:CDS | 40.0% | |
| AGCTTGAAGATGAAGTTGTG+GGG | + | chr1.3:75496419-75496438 | MS.gene71829:intron | 40.0% | |
| AGGATAAGGTGAAACTTGAG+AGG | + | chr1.3:75496800-75496819 | MS.gene71829:intron | 40.0% | |
| AGTAGCCAAGGTGATATCAA+AGG | + | chr1.3:75496339-75496358 | MS.gene71829:intron | 40.0% | |
| ATAAGTCATCTGTGTAGCCA+TGG | + | chr1.3:75495606-75495625 | MS.gene71829:intron | 40.0% | |
| ATACGAGATTCGTTGTTCGA+TGG | - | chr1.3:75496319-75496338 | None:intergenic | 40.0% | |
| ATATACTCCCAACTCCTTGA+TGG | - | chr1.3:75495432-75495451 | None:intergenic | 40.0% | |
| CACACTCAGGACTGAATATT+TGG | - | chr1.3:75497350-75497369 | None:intergenic | 40.0% | |
| CAGGTGAAAATGTTCGGTTT+CGG | + | chr1.3:75493318-75493337 | MS.gene71829:CDS | 40.0% | |
| CATTAGGTCTTCATGCATGT+AGG | - | chr1.3:75496292-75496311 | None:intergenic | 40.0% | |
| CCTGCAATTCCTCTAAGTTT+GGG | - | chr1.3:75493521-75493540 | None:intergenic | 40.0% | |
| CTATGTCTACCAGATTGATG+TGG | - | chr1.3:75494527-75494546 | None:intergenic | 40.0% | |
| CTCAAACTCCTTCAACTAAC+AGG | - | chr1.3:75496840-75496859 | None:intergenic | 40.0% | |
| CTTCTCTTATTCCTGTTTCC+TGG | + | chr1.3:75493082-75493101 | MS.gene71829:CDS | 40.0% | |
| CTTTGCCTTTGATATCACCT+TGG | - | chr1.3:75496347-75496366 | None:intergenic | 40.0% | |
| GAAAATAACATGCTCGGCAA+CGG | + | chr1.3:75497096-75497115 | MS.gene71829:intron | 40.0% | |
| GAACCAATGAAGAACAAAGC+TGG | + | chr1.3:75496170-75496189 | MS.gene71829:intron | 40.0% | |
| GAAGATGCTGGATTTCAAGA+AGG | + | chr1.3:75494546-75494565 | MS.gene71829:CDS | 40.0% | |
| GAGCTTGAAGATGAAGTTGT+GGG | + | chr1.3:75496418-75496437 | MS.gene71829:intron | 40.0% | |
| GATTATGCGGTTGAGAAACA+CGG | - | chr1.3:75495080-75495099 | None:intergenic | 40.0% | |
| GCTGTTGCTAAACATGAAGA+TGG | + | chr1.3:75496467-75496486 | MS.gene71829:intron | 40.0% | |
| GGAAAAGATGTCTTTATGGG+TGG | + | chr1.3:75496148-75496167 | MS.gene71829:intron | 40.0% | |
| GGAACGGAAACTTCTATTGA+AGG | + | chr1.3:75494626-75494645 | MS.gene71829:CDS | 40.0% | |
| GGTGAGGAAGTAATTTCAGT+TGG | + | chr1.3:75495507-75495526 | MS.gene71829:intron | 40.0% | |
| GTAGGGAAATGTGAAAACCT+TGG | + | chr1.3:75493199-75493218 | MS.gene71829:intron | 40.0% | |
| GTTGGATCAACAAGTTTGAG+AGG | + | chr1.3:75495545-75495564 | MS.gene71829:intron | 40.0% | |
| GTTTCGGCAAAAAACCTTAC+CGG | + | chr1.3:75497045-75497064 | MS.gene71829:intron | 40.0% | |
| TAATAAGGCTGCTTCTGCTT+CGG | + | chr1.3:75493286-75493305 | MS.gene71829:CDS | 40.0% | |
| TCAAAACCTCTCATGATACC+AGG | - | chr1.3:75493467-75493486 | None:intergenic | 40.0% | |
| TCCATGATTCGTAACCCATT+TGG | + | chr1.3:75495711-75495730 | MS.gene71829:intron | 40.0% | |
| TCCTGCAATTCCTCTAAGTT+TGG | - | chr1.3:75493522-75493541 | None:intergenic | 40.0% | |
| TGAAAATGTTCGGTTTCGGT+TGG | + | chr1.3:75493322-75493341 | MS.gene71829:CDS | 40.0% | |
| TGAGCTTGAAGATGAAGTTG+TGG | + | chr1.3:75496417-75496436 | MS.gene71829:intron | 40.0% | |
| TGTGATTAACCCATCAGGAA+GGG | + | chr1.3:75494605-75494624 | MS.gene71829:CDS | 40.0% | |
| TTATGACACATCACCCAAGT+CGG | - | chr1.3:75495669-75495688 | None:intergenic | 40.0% | |
| TTGGAATATAAGAGGTCCGT+TGG | + | chr1.3:75495002-75495021 | MS.gene71829:intron | 40.0% | |
| TTGTTGGGTATGAAGCAAGA+GGG | + | chr1.3:75495738-75495757 | MS.gene71829:intron | 40.0% | |
| TTTGCTCTCTTTCTTGAACC+TGG | - | chr1.3:75493365-75493384 | None:intergenic | 40.0% | |
| TTTGTTGGGTATGAAGCAAG+AGG | + | chr1.3:75495737-75495756 | MS.gene71829:intron | 40.0% | |
| ! | ACAAAACGGACTCGATTATG+CGG | - | chr1.3:75495093-75495112 | None:intergenic | 40.0% |
| ! | AGGACTGAATATTTGGAGTG+AGG | - | chr1.3:75497343-75497362 | None:intergenic | 40.0% |
| ! | TCTGGTTTCCTCATAAACTC+AGG | + | chr1.3:75497711-75497730 | MS.gene71829:intron | 40.0% |
| ! | TTTTTATTCTCCTCTGCCCT+AGG | - | chr1.3:75496057-75496076 | None:intergenic | 40.0% |
| !! | AATGGGTTACGAATCATGGA+TGG | - | chr1.3:75495711-75495730 | None:intergenic | 40.0% |
| !! | ACCAAATGGGTTACGAATCA+TGG | - | chr1.3:75495715-75495734 | None:intergenic | 40.0% |
| !! | ACCTTACAAACTGGTCTTGT+CGG | - | chr1.3:75497281-75497300 | None:intergenic | 40.0% |
| !! | CATATGAAATAGGTGTTGGG+AGG | + | chr1.3:75495574-75495593 | MS.gene71829:intron | 40.0% |
| !! | CTTCCAGCTTTGTTCTTCAT+TGG | - | chr1.3:75496176-75496195 | None:intergenic | 40.0% |
| !! | GGTATCATGAGAGGTTTTGA+AGG | + | chr1.3:75493467-75493486 | MS.gene71829:CDS | 40.0% |
| !! | GTTCTGGATCCAGGTTTTTA+GGG | - | chr1.3:75497194-75497213 | None:intergenic | 40.0% |
| !!! | AGTTGTGGTTTTGGAATGAG+AGG | + | chr1.3:75493422-75493441 | MS.gene71829:CDS | 40.0% |
| !!! | ATCATGAGAGGTTTTGAAGG+TGG | + | chr1.3:75493470-75493489 | MS.gene71829:CDS | 40.0% |
| !!! | GCAAGATTTTTGGCAACTGA+TGG | - | chr1.3:75498072-75498091 | None:intergenic | 40.0% |
| AAATACGCTGTTACCAGAGC+AGG | - | chr1.3:75497216-75497235 | None:intergenic | 45.0% | |
| AAGAAAAGAGTCGGTCGGTT+TGG | + | chr1.3:75495928-75495947 | MS.gene71829:intron | 45.0% | |
| AAGAGGGCTTAGGTTTGAGA+GGG | + | chr1.3:75495249-75495268 | MS.gene71829:intron | 45.0% | |
| AAGGAGAAACTTGAGTCTGC+TGG | + | chr1.3:75498003-75498022 | MS.gene71829:CDS | 45.0% | |
| AAGGCTTCCCAAATAGAGCT+TGG | - | chr1.3:75497313-75497332 | None:intergenic | 45.0% | |
| AAGTTTCTCCTTCGCTGATG+TGG | - | chr1.3:75497995-75498014 | None:intergenic | 45.0% | |
| AATGCTCCAAAACCCGACTT+GGG | + | chr1.3:75495653-75495672 | MS.gene71829:intron | 45.0% | |
| ACCGACAAGACCAGTTTGTA+AGG | + | chr1.3:75497277-75497296 | MS.gene71829:intron | 45.0% | |
| ACCTGGTAACCTAACAGAAG+TGG | + | chr1.3:75496117-75496136 | MS.gene71829:intron | 45.0% | |
| ACTGGGAGTCAAACTGTCAA+AGG | + | chr1.3:75496672-75496691 | MS.gene71829:intron | 45.0% | |
| ACTTCTGTTAGGTTACCAGG+TGG | - | chr1.3:75496118-75496137 | None:intergenic | 45.0% | |
| AGAGCAAAGAGAAAGGGAAG+AGG | + | chr1.3:75493377-75493396 | MS.gene71829:CDS | 45.0% | |
| AGATTGAAGCTACCCTTGGA+CGG | + | chr1.3:75495860-75495879 | MS.gene71829:intron | 45.0% | |
| AGGCTTCCCAAATAGAGCTT+GGG | - | chr1.3:75497312-75497331 | None:intergenic | 45.0% | |
| AGTATGCCTATTACAGGAGC+CGG | + | chr1.3:75494099-75494118 | MS.gene71829:intron | 45.0% | |
| ATACGCTACCAAGTGGGAAA+AGG | + | chr1.3:75497642-75497661 | MS.gene71829:intron | 45.0% | |
| ATCCATTGTGACGAAAAGCG+TGG | - | chr1.3:75497846-75497865 | None:intergenic | 45.0% | |
| ATTCAGTCCTGAGTGTGTGA+GGG | + | chr1.3:75497353-75497372 | MS.gene71829:intron | 45.0% | |
| ATTGCGCAAAAGCTCCCATT+TGG | - | chr1.3:75493771-75493790 | None:intergenic | 45.0% | |
| CAAAAATCTCGATCTGGACC+TGG | + | chr1.3:75493446-75493465 | MS.gene71829:CDS | 45.0% | |
| CAACACAAAGTTTGAGAGGC+GGG | + | chr1.3:75496620-75496639 | MS.gene71829:intron | 45.0% | |
| CACATCATTGTTGAATGCGG+AGG | + | chr1.3:75496206-75496225 | MS.gene71829:intron | 45.0% | |
| CATCAATGCATGAGCCTATG+CGG | - | chr1.3:75496522-75496541 | None:intergenic | 45.0% | |
| CCCAAACTTAGAGGAATTGC+AGG | + | chr1.3:75493518-75493537 | MS.gene71829:CDS | 45.0% | |
| CCTCCTGTATGGTTCAGTTT+CGG | + | chr1.3:75497029-75497048 | MS.gene71829:intron | 45.0% | |
| CGAATCTCGTATAGTAGCCA+AGG | + | chr1.3:75496327-75496346 | MS.gene71829:intron | 45.0% | |
| CGGTTTCGGTTGGACAATTT+GGG | + | chr1.3:75493332-75493351 | MS.gene71829:CDS | 45.0% | |
| CTCTTTCTTGAACCTGGTTG+TGG | - | chr1.3:75493359-75493378 | None:intergenic | 45.0% | |
| CTGGGAGTCAAACTGTCAAA+GGG | + | chr1.3:75496673-75496692 | MS.gene71829:intron | 45.0% | |
| CTGGTAGACATAGAAGATGC+TGG | + | chr1.3:75494534-75494553 | MS.gene71829:CDS | 45.0% | |
| CTTCTCTACTCCCTATACCA+AGG | - | chr1.3:75495309-75495328 | None:intergenic | 45.0% | |
| CTTGATCACTCCCTAACAGT+AGG | - | chr1.3:75493991-75494010 | None:intergenic | 45.0% | |
| GAGTGAAGAAAAGAGTCGGT+CGG | + | chr1.3:75495923-75495942 | MS.gene71829:intron | 45.0% | |
| GATTCCTGGCCGTAAGAAAT+GGG | + | chr1.3:75498041-75498060 | MS.gene71829:CDS | 45.0% | |
| GCAACACAAAGTTTGAGAGG+CGG | + | chr1.3:75496619-75496638 | MS.gene71829:intron | 45.0% | |
| GGAGTGAAATGACTATGGCA+TGG | + | chr1.3:75496014-75496033 | MS.gene71829:intron | 45.0% | |
| GTCTTGCTGCAGCTAGAATA+AGG | - | chr1.3:75496750-75496769 | None:intergenic | 45.0% | |
| GTGTGATTAACCCATCAGGA+AGG | + | chr1.3:75494604-75494623 | MS.gene71829:CDS | 45.0% | |
| GTGTGCTCTTGTACAAAGGA+TGG | + | chr1.3:75496238-75496257 | MS.gene71829:intron | 45.0% | |
| TATGACACATCACCCAAGTC+GGG | - | chr1.3:75495668-75495687 | None:intergenic | 45.0% | |
| TATTCAGTCCTGAGTGTGTG+AGG | + | chr1.3:75497352-75497371 | MS.gene71829:intron | 45.0% | |
| TCCACTTCTGTTAGGTTACC+AGG | - | chr1.3:75496121-75496140 | None:intergenic | 45.0% | |
| TCGGTTTCGGTTGGACAATT+TGG | + | chr1.3:75493331-75493350 | MS.gene71829:CDS | 45.0% | |
| TGACAACTTCAACCTTTGGG+TGG | + | chr1.3:75496391-75496410 | MS.gene71829:intron | 45.0% | |
| TGATTCCTGGCCGTAAGAAA+TGG | + | chr1.3:75498040-75498059 | MS.gene71829:CDS | 45.0% | |
| TGGATTTCAAGAAGGGGAAG+AGG | + | chr1.3:75494554-75494573 | MS.gene71829:CDS | 45.0% | |
| TGTTCCATCACTGTGATTCC+TGG | + | chr1.3:75498027-75498046 | MS.gene71829:CDS | 45.0% | |
| TTAACCCATCAGGAAGGGAA+CGG | + | chr1.3:75494610-75494629 | MS.gene71829:CDS | 45.0% | |
| TTAACCCATTTCTTACGGCC+AGG | - | chr1.3:75498048-75498067 | None:intergenic | 45.0% | |
| TTGAATGGAGAAGCGAGAGA+GGG | - | chr1.3:75493111-75493130 | None:intergenic | 45.0% | |
| TTGCCGAAACTGAACCATAC+AGG | - | chr1.3:75497035-75497054 | None:intergenic | 45.0% | |
| TTGGGCAATCGTCGATAAAG+TGG | - | chr1.3:75493503-75493522 | None:intergenic | 45.0% | |
| TTGGTATCAAGGCTCCATCA+AGG | + | chr1.3:75495415-75495434 | MS.gene71829:intron | 45.0% | |
| ! | AAAGGCACACATGGATGTCA+TGG | + | chr1.3:75495482-75495501 | MS.gene71829:intron | 45.0% |
| ! | AACCGAACATTTTCACCTGC+TGG | - | chr1.3:75493317-75493336 | None:intergenic | 45.0% |
| ! | CTTCTTGGCGAAGTATTCGT+CGG | - | chr1.3:75498100-75498119 | None:intergenic | 45.0% |
| ! | GCATGGAAGTGGAAGTTGAT+CGG | + | chr1.3:75496031-75496050 | MS.gene71829:intron | 45.0% |
| ! | GCTTCCTATAAGCCTTGTGA+AGG | + | chr1.3:75497074-75497093 | MS.gene71829:intron | 45.0% |
| ! | TAGCTGCAGCAAGACTGTTT+TGG | + | chr1.3:75496755-75496774 | MS.gene71829:intron | 45.0% |
| ! | TAGGCTCATGCATTGATGAG+AGG | + | chr1.3:75496524-75496543 | MS.gene71829:intron | 45.0% |
| ! | TTCCACGCTTTTCGTCACAA+TGG | + | chr1.3:75497841-75497860 | MS.gene71829:intron | 45.0% |
| ! | TTTGGAGTGAGGACAAACGA+AGG | - | chr1.3:75497332-75497351 | None:intergenic | 45.0% |
| !! | GTACAAGAGCACACTTTTGG+TGG | - | chr1.3:75496232-75496251 | None:intergenic | 45.0% |
| !! | GTTGTTCGATGGTGGACATT+AGG | - | chr1.3:75496308-75496327 | None:intergenic | 45.0% |
| !! | GTTTGTTGTGCTCTGGTTTC+AGG | + | chr1.3:75497915-75497934 | MS.gene71829:intron | 45.0% |
| !!! | GGTTCTGGATCCAGGTTTTT+AGG | - | chr1.3:75497195-75497214 | None:intergenic | 45.0% |
| !!! | GTGCTCTGGTTTCAGGTTTT+GGG | + | chr1.3:75497922-75497941 | MS.gene71829:intron | 45.0% |
| !!! | TGGATCCAGGTTTTTAGGGT+TGG | - | chr1.3:75497190-75497209 | None:intergenic | 45.0% |
| !!! | TGGTTTCAGGTTTTGGGTGA+AGG | + | chr1.3:75497928-75497947 | MS.gene71829:intron | 45.0% |
| !!! | TGTGCTCTGGTTTCAGGTTT+TGG | + | chr1.3:75497921-75497940 | MS.gene71829:intron | 45.0% |
| !!! | TTTTATAAAAAAACATAATA+AGG | + | chr1.3:75494474-75494493 | MS.gene71829:intron | 5.0% |
| !!! | TTTTATAAAAATAAAAGAAA+AGG | - | chr1.3:75494464-75494483 | None:intergenic | 5.0% |
| AGAGAGGGTAACCAGGAAAC+AGG | - | chr1.3:75493096-75493115 | None:intergenic | 50.0% | |
| AGGGCTTGTGCATGAATGCA+AGG | + | chr1.3:75495757-75495776 | MS.gene71829:intron | 50.0% | |
| AGTTTCCGTTCCCTTCCTGA+TGG | - | chr1.3:75494618-75494637 | None:intergenic | 50.0% | |
| ATTACCGAACAGGGGACAGT+AGG | + | chr1.3:75496079-75496098 | MS.gene71829:intron | 50.0% | |
| CAAGGCTCCATCAAGGAGTT+GGG | + | chr1.3:75495422-75495441 | MS.gene71829:intron | 50.0% | |
| CAATCCTACTGTCCCCTGTT+CGG | - | chr1.3:75496086-75496105 | None:intergenic | 50.0% | |
| CAATGCTCCAAAACCCGACT+TGG | + | chr1.3:75495652-75495671 | MS.gene71829:intron | 50.0% | |
| CATGGATGTCATGGATGGTG+AGG | + | chr1.3:75495491-75495510 | MS.gene71829:intron | 50.0% | |
| CCGAAACTGAACCATACAGG+AGG | - | chr1.3:75497032-75497051 | None:intergenic | 50.0% | |
| CGACGATTGCCCAAACTTAG+AGG | + | chr1.3:75493509-75493528 | MS.gene71829:CDS | 50.0% | |
| CGAGATTCGTTGTTCGATGG+TGG | - | chr1.3:75496316-75496335 | None:intergenic | 50.0% | |
| CTACCAAGTGGGAAAAGGCA+TGG | + | chr1.3:75497647-75497666 | MS.gene71829:intron | 50.0% | |
| CTCCTTCGCTGATGTGGAAA+AGG | - | chr1.3:75497989-75498008 | None:intergenic | 50.0% | |
| CTCTCTCGCTTCTCCATTCA+AGG | + | chr1.3:75493110-75493129 | MS.gene71829:CDS | 50.0% | |
| CTTGAATGGAGAAGCGAGAG+AGG | - | chr1.3:75493112-75493131 | None:intergenic | 50.0% | |
| GAAGAGGGCTTAGGTTTGAG+AGG | + | chr1.3:75495248-75495267 | MS.gene71829:intron | 50.0% | |
| GACAATTTGGGTCCACAACC+AGG | + | chr1.3:75493344-75493363 | MS.gene71829:CDS | 50.0% | |
| GATTGAAGCTACCCTTGGAC+GGG | + | chr1.3:75495861-75495880 | MS.gene71829:intron | 50.0% | |
| GCACACATGGATGTCATGGA+TGG | + | chr1.3:75495486-75495505 | MS.gene71829:intron | 50.0% | |
| GCAGGCGTCAAAGAGTTCTT+TGG | + | chr1.3:75496645-75496664 | MS.gene71829:intron | 50.0% | |
| GCATATCCGGCTCCTGTAAT+AGG | - | chr1.3:75494108-75494127 | None:intergenic | 50.0% | |
| GGCAAGATTGAAGCTACCCT+TGG | + | chr1.3:75495856-75495875 | MS.gene71829:intron | 50.0% | |
| GGCCAACTGAAGACTCATCA+GGG | - | chr1.3:75496971-75496990 | None:intergenic | 50.0% | |
| GGTTACGAATCATGGATGGC+TGG | - | chr1.3:75495707-75495726 | None:intergenic | 50.0% | |
| GTCATCTGTGTAGCCATGGA+AGG | + | chr1.3:75495610-75495629 | MS.gene71829:intron | 50.0% | |
| GTTTCCGTTCCCTTCCTGAT+GGG | - | chr1.3:75494617-75494636 | None:intergenic | 50.0% | |
| TCAAGCTCAATGCCACCCAA+AGG | - | chr1.3:75496406-75496425 | None:intergenic | 50.0% | |
| TCAAGGCTCCATCAAGGAGT+TGG | + | chr1.3:75495421-75495440 | MS.gene71829:intron | 50.0% | |
| TCCAATAGTGACCCGTCCAA+GGG | - | chr1.3:75495875-75495894 | None:intergenic | 50.0% | |
| TCTGGACCTGGTATCATGAG+AGG | + | chr1.3:75493458-75493477 | MS.gene71829:CDS | 50.0% | |
| TGCTCTTTGAGCCTCCTGTA+TGG | + | chr1.3:75497018-75497037 | MS.gene71829:intron | 50.0% | |
| TGGGGAAGATGCATCTGTGT+TGG | + | chr1.3:75495527-75495546 | MS.gene71829:intron | 50.0% | |
| TTAGTATAGTCGGGGGTCCT+TGG | + | chr1.3:75495289-75495308 | MS.gene71829:intron | 50.0% | |
| TTCAAAGAGGCTGACCGCAT+AGG | + | chr1.3:75496505-75496524 | MS.gene71829:intron | 50.0% | |
| TTCAGTCCTGAGTGTGTGAG+GGG | + | chr1.3:75497354-75497373 | MS.gene71829:intron | 50.0% | |
| ! | AAGTGGAAGTTGATCGGCCT+AGG | + | chr1.3:75496037-75496056 | MS.gene71829:intron | 50.0% |
| ! | ACATCACCCAAGTCGGGTTT+TGG | - | chr1.3:75495662-75495681 | None:intergenic | 50.0% |
| ! | AGTGGAAGTTGATCGGCCTA+GGG | + | chr1.3:75496038-75496057 | MS.gene71829:intron | 50.0% |
| ! | CAAGGAGCGAGTTGTGGTTT+TGG | + | chr1.3:75493413-75493432 | MS.gene71829:CDS | 50.0% |
| ! | GCTTGTAGTTTGTGGGAGCT+AGG | + | chr1.3:75496864-75496883 | MS.gene71829:intron | 50.0% |
| ! | GTCGGCACGTGCAAGATTTT+TGG | - | chr1.3:75498082-75498101 | None:intergenic | 50.0% |
| ! | TGCCTTTTCCACATCAGCGA+AGG | + | chr1.3:75497984-75498003 | MS.gene71829:CDS | 50.0% |
| !! | CTGGTCTTGTCGGTTCAGTT+AGG | - | chr1.3:75497271-75497290 | None:intergenic | 50.0% |
| !! | TCTAGGGTTAGCCTTGACGA+CGG | + | chr1.3:75497164-75497183 | MS.gene71829:intron | 50.0% |
| AAGTTTGAGAGGCGGGATGC+AGG | + | chr1.3:75496627-75496646 | MS.gene71829:intron | 55.0% | |
| ACAACTCGCTCCTTGTCCTG+CGG | - | chr1.3:75493408-75493427 | None:intergenic | 55.0% | |
| ACCCTTGGACGGGTCACTAT+TGG | + | chr1.3:75495871-75495890 | MS.gene71829:intron | 55.0% | |
| ACGGCCAGGAATCACAGTGA+TGG | - | chr1.3:75498034-75498053 | None:intergenic | 55.0% | |
| AGAAGCGAGAGAGGGTAACC+AGG | - | chr1.3:75493103-75493122 | None:intergenic | 55.0% | |
| AGCAGCTGCTTCTCGCTTCT+TGG | - | chr1.3:75498115-75498134 | None:intergenic | 55.0% | |
| AGTCGGGGGTCCTTGGTATA+GGG | + | chr1.3:75495296-75495315 | MS.gene71829:intron | 55.0% | |
| CAGGGGACAGTAGGATTGCA+AGG | + | chr1.3:75496088-75496107 | MS.gene71829:intron | 55.0% | |
| CTCCAATAGTGACCCGTCCA+AGG | - | chr1.3:75495876-75495895 | None:intergenic | 55.0% | |
| CTTGGACGGGTCACTATTGG+AGG | + | chr1.3:75495874-75495893 | MS.gene71829:intron | 55.0% | |
| GACGGCCAACCCTAAAAACC+TGG | + | chr1.3:75497182-75497201 | MS.gene71829:intron | 55.0% | |
| GCTGTTACCAGAGCAGGTTC+TGG | - | chr1.3:75497210-75497229 | None:intergenic | 55.0% | |
| GGATTGCAAGGTCAACCACC+TGG | + | chr1.3:75496100-75496119 | MS.gene71829:intron | 55.0% | |
| GGCCCTGATGAGTCTTCAGT+TGG | + | chr1.3:75496966-75496985 | MS.gene71829:intron | 55.0% | |
| GGGCCAACTGAAGACTCATC+AGG | - | chr1.3:75496972-75496991 | None:intergenic | 55.0% | |
| TAGTCGGGGGTCCTTGGTAT+AGG | + | chr1.3:75495295-75495314 | MS.gene71829:intron | 55.0% | |
| TCTGCTTCGGTGAAACCAGC+AGG | + | chr1.3:75493299-75493318 | MS.gene71829:CDS | 55.0% | |
| ! | AGTGGGAAAAGGCATGGTGG+TGG | + | chr1.3:75497653-75497672 | MS.gene71829:intron | 55.0% |
| ! | CCAAGTGGGAAAAGGCATGG+TGG | + | chr1.3:75497650-75497669 | MS.gene71829:intron | 55.0% |
| ! | CCACCATGCCTTTTCCCACT+TGG | - | chr1.3:75497653-75497672 | None:intergenic | 55.0% |
| ! | GGTGTCTCTGGAGACACTGA+CGG | + | chr1.3:75494575-75494594 | MS.gene71829:CDS | 55.0% |
| !! | AAGGGAAGAGGTATTGCCGC+AGG | + | chr1.3:75493389-75493408 | MS.gene71829:CDS | 55.0% |
| !! | AGAAGGGGAAGAGGTGTCTC+TGG | + | chr1.3:75494563-75494582 | MS.gene71829:CDS | 55.0% |
| !! | AGAGGTATTGCCGCAGGACA+AGG | + | chr1.3:75493395-75493414 | MS.gene71829:CDS | 55.0% |
| !! | TTTAGGGTTGGCCGTCGTCA+AGG | - | chr1.3:75497178-75497197 | None:intergenic | 55.0% |
| ACACCTCCCCTCACACACTC+AGG | - | chr1.3:75497363-75497382 | None:intergenic | 60.0% | |
| AGTCCTGAGTGTGTGAGGGG+AGG | + | chr1.3:75497357-75497376 | MS.gene71829:intron | 60.0% | |
| AGTTGATCGGCCTAGGGCAG+AGG | + | chr1.3:75496044-75496063 | MS.gene71829:intron | 60.0% | |
| CCTGGATCCAGAACCTGCTC+TGG | + | chr1.3:75497200-75497219 | MS.gene71829:intron | 60.0% | |
| GCAGGACAAGGAGCGAGTTG+TGG | + | chr1.3:75493407-75493426 | MS.gene71829:CDS | 60.0% | |
| !! | CCAGAGCAGGTTCTGGATCC+AGG | - | chr1.3:75497203-75497222 | None:intergenic | 60.0% |
| CATGCTCGGCAACGGCAGTG+CGG | + | chr1.3:75497104-75497123 | MS.gene71829:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75493069 | 75498155 | 75493069 | ID=MS.gene71829 |
| chr1.3 | mRNA | 75493069 | 75498155 | 75493069 | ID=MS.gene71829.t1;Parent=MS.gene71829 |
| chr1.3 | exon | 75493069 | 75493131 | 75493069 | ID=MS.gene71829.t1.exon1;Parent=MS.gene71829.t1 |
| chr1.3 | CDS | 75493069 | 75493131 | 75493069 | ID=cds.MS.gene71829.t1;Parent=MS.gene71829.t1 |
| chr1.3 | exon | 75493203 | 75493542 | 75493203 | ID=MS.gene71829.t1.exon2;Parent=MS.gene71829.t1 |
| chr1.3 | CDS | 75493203 | 75493542 | 75493203 | ID=cds.MS.gene71829.t1;Parent=MS.gene71829.t1 |
| chr1.3 | exon | 75494496 | 75494647 | 75494496 | ID=MS.gene71829.t1.exon3;Parent=MS.gene71829.t1 |
| chr1.3 | CDS | 75494496 | 75494647 | 75494496 | ID=cds.MS.gene71829.t1;Parent=MS.gene71829.t1 |
| chr1.3 | exon | 75497937 | 75498155 | 75497937 | ID=MS.gene71829.t1.exon4;Parent=MS.gene71829.t1 |
| chr1.3 | CDS | 75497937 | 75498155 | 75497937 | ID=cds.MS.gene71829.t1;Parent=MS.gene71829.t1 |
| Gene Sequence |
| Protein sequence |
