AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72287


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72287.t1 MTR_4g102230 98.707 232 3 0 4 235 1 232 1.17e-171 471
MS.gene72287.t1 MTR_4g102230 98.324 179 3 0 4 182 1 179 8.64e-131 367
MS.gene72287.t1 MTR_4g102230 98.324 179 3 0 4 182 1 179 3.02e-130 366
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72287.t1 AT1G62850 66.518 224 63 4 16 235 20 235 9.18e-94 275
MS.gene72287.t1 AT1G62850 66.518 224 63 4 16 235 20 235 9.18e-94 275
MS.gene72287.t1 AT1G62850 66.667 195 53 4 16 206 20 206 2.30e-80 239

Find 56 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCCTCAGCTTCAGATTC+TGG 0.206596 8.2:-21407787 MS.gene72287:CDS
TAGATCGATGTTCGGCTTCT+TGG 0.249968 8.2:+21407719 None:intergenic
AAACTTCTGTGTTCTAGTTT+TGG 0.258270 8.2:+21404091 None:intergenic
GGATGCTTTGGCAAAGCTTC+AGG 0.322950 8.2:-21403972 MS.gene72287:intron
TGCTCTTCTGAGGGAGGTGG+TGG 0.329151 8.2:+21402732 None:intergenic
CTTCCTCAGCTTCAGATTCT+GGG 0.393020 8.2:-21407786 MS.gene72287:CDS
CCCATTCCTAAAATCACTTT+GGG 0.395822 8.2:-21407676 MS.gene72287:intron
TGAAGAGAGGAGAGGAAGAA+AGG 0.398042 8.2:+21407847 None:intergenic
CCCCATTCCTAAAATCACTT+TGG 0.402112 8.2:-21407677 MS.gene72287:CDS
TGAAACAAAACTTGGATGTA+TGG 0.414686 8.2:-21407973 None:intergenic
AGAGGAAGAAAGGGCGAGAA+AGG 0.436039 8.2:+21407857 None:intergenic
GAAGAGAGGAGAGGAAGAAA+GGG 0.445403 8.2:+21407848 None:intergenic
AAAGAAGAAGTAAAAGTAGT+TGG 0.447871 8.2:-21402481 MS.gene72287:CDS
CGGCTTCTTGGAGAAGCTCA+TGG 0.448424 8.2:+21407731 None:intergenic
ATTGGCTAAGTGAAAGGGTC+AGG 0.448821 8.2:-21404914 MS.gene72287:CDS
GGGTAACATTGAGGATGCTT+TGG 0.448922 8.2:-21403984 MS.gene72287:CDS
CAGGGAGAAGATTATGCAAA+TGG 0.463990 8.2:-21404895 MS.gene72287:intron
GTAATGCGAAGAAGAGAAGA+AGG 0.469023 8.2:+21407886 None:intergenic
AAGAAGAAGTAAAAGTAGTT+GGG 0.476573 8.2:-21402480 MS.gene72287:CDS
GAGACGTTTGTGCTCTCCTA+TGG 0.480721 8.2:+21402538 None:intergenic
GTCGACATGCGGTTCAATGT+TGG 0.505525 8.2:-21404945 MS.gene72287:CDS
CAAAACTTGGATGTATGGTA+TGG 0.514654 8.2:-21407968 None:intergenic
GGCTTCAACAACCACTAGAA+TGG 0.521120 8.2:-21407947 MS.gene72287:CDS
TTTCTTCAGGGGTAACATTG+AGG 0.534771 8.2:-21403993 MS.gene72287:intron
GCTCTTCTGAGGGAGGTGGT+GGG 0.534879 8.2:+21402733 None:intergenic
GCGCATCGAATTGCAGTGGC+GGG 0.539361 8.2:+21407808 None:intergenic
AGTATCCTCTCGGCTTTCGC+AGG 0.539470 8.2:-21407755 MS.gene72287:CDS
AGCGGAGATAGATCGATGTT+CGG 0.541156 8.2:+21407711 None:intergenic
ATTGAACCGCATGTCGACCT+TGG 0.541896 8.2:+21404950 None:intergenic
TTTGCCAGAAGTGGAGGACC+TGG 0.545145 8.2:-21407531 MS.gene72287:CDS
GGCACATTGGCTAAGTGAAA+GGG 0.546502 8.2:-21404919 MS.gene72287:CDS
TATTCCTTTCACCATTCTAG+TGG 0.547459 8.2:+21407936 None:intergenic
CACTTCTGTAGGGCTGCCAT+AGG 0.548523 8.2:-21402554 MS.gene72287:intron
AAAATCGTATGAACAAGGAT+GGG 0.550226 8.2:-21404133 MS.gene72287:CDS
TGCCAGAAGTGGAGGACCTG+GGG 0.553451 8.2:-21407529 MS.gene72287:CDS
AATGCGAAGAAGAGAAGAAG+GGG 0.560405 8.2:+21407888 None:intergenic
AGGCACATTGGCTAAGTGAA+AGG 0.561094 8.2:-21404920 MS.gene72287:CDS
TTGCCAGAAGTGGAGGACCT+GGG 0.565073 8.2:-21407530 MS.gene72287:CDS
TAATGCGAAGAAGAGAAGAA+GGG 0.588164 8.2:+21407887 None:intergenic
CATGCGGTTCAATGTTGGAA+AGG 0.591093 8.2:-21404940 MS.gene72287:CDS
AGCGCATCGAATTGCAGTGG+CGG 0.596376 8.2:+21407807 None:intergenic
GGAACAACAAAGTATCCTCT+CGG 0.606425 8.2:-21407765 MS.gene72287:CDS
CAAACGTCTCAAAAGCAAGA+AGG 0.607475 8.2:-21402525 MS.gene72287:CDS
TCAATGTTGGAAAGGCACAT+TGG 0.618902 8.2:-21404932 MS.gene72287:CDS
AAATCGTATGAACAAGGATG+GGG 0.621165 8.2:-21404132 MS.gene72287:CDS
GTTCCCAGAATCTGAAGCTG+AGG 0.628074 8.2:+21407783 None:intergenic
TTGGCTAAGTGAAAGGGTCA+GGG 0.636328 8.2:-21404913 MS.gene72287:CDS
CGAGCGCTGTAATTGAAGAG+AGG 0.641440 8.2:+21407834 None:intergenic
ACAACCACTAGAATGGTGAA+AGG 0.641721 8.2:-21407940 MS.gene72287:CDS
GCCAGAAGTGGAGGACCTGG+GGG 0.642506 8.2:-21407528 MS.gene72287:CDS
ATGCGAAGAAGAGAAGAAGG+GGG 0.642820 8.2:+21407889 None:intergenic
GCTGTAATTGAAGAGAGGAG+AGG 0.684565 8.2:+21407839 None:intergenic
GGAAGCGCATCGAATTGCAG+TGG 0.684620 8.2:+21407804 None:intergenic
ATGGACCTGCGAAAGCCGAG+AGG 0.719112 8.2:+21407750 None:intergenic
TGAACACCAAGGTCGACATG+CGG 0.719333 8.2:-21404956 MS.gene72287:CDS
TGATTGTACAGTGAACACCA+AGG 0.820851 8.2:-21404967 MS.gene72287:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGTTTCTTATAAATAA+TGG + chr8.2:21406140-21406159 None:intergenic 10.0%
!! TATAGAAAAAAAATATTAGA+TGG - chr8.2:21405875-21405894 MS.gene72287:intron 10.0%
!! TTTATAAGAAACATATTTAT+AGG - chr8.2:21406143-21406162 MS.gene72287:intron 10.0%
!!! GATTTTTATATAATTTTGTT+GGG - chr8.2:21402856-21402875 MS.gene72287:intron 10.0%
!!! TGATTTTTATATAATTTTGT+TGG - chr8.2:21402855-21402874 MS.gene72287:intron 10.0%
!! AATACAAAAATTCAATAGAA+TGG + chr8.2:21406375-21406394 None:intergenic 15.0%
!! ACATATAATTATAACTTCAA+AGG + chr8.2:21407475-21407494 None:intergenic 15.0%
!! AGTTAAATTTCATACAAAAT+GGG - chr8.2:21405719-21405738 MS.gene72287:intron 15.0%
!! ATAAATATTTGTAAGCTAAT+AGG - chr8.2:21405981-21406000 MS.gene72287:intron 15.0%
!! ATATTTATAGAGAAAAAGAA+AGG + chr8.2:21405969-21405988 None:intergenic 15.0%
!! CATATAATTATAACTTCAAA+GGG + chr8.2:21407474-21407493 None:intergenic 15.0%
!! TAAAATAAATCAATCTTCAA+AGG - chr8.2:21403231-21403250 MS.gene72287:intron 15.0%
!! TAAATATTTGTAAGCTAATA+GGG - chr8.2:21405982-21406001 MS.gene72287:intron 15.0%
!! TAGTTAAATTTCATACAAAA+TGG - chr8.2:21405718-21405737 MS.gene72287:intron 15.0%
!! TATTTATAGAGAAAAAGAAA+GGG + chr8.2:21405968-21405987 None:intergenic 15.0%
!! TTAAAATACGGTTTATTATT+TGG - chr8.2:21407791-21407810 MS.gene72287:CDS 15.0%
!!! AATTCATTTTATAAGGTATT+AGG - chr8.2:21402999-21403018 MS.gene72287:intron 15.0%
!!! TATCTAATGTAAATTTTGTA+GGG - chr8.2:21405067-21405086 MS.gene72287:intron 15.0%
!! AAAACATTCATAAATAACAG+AGG - chr8.2:21404233-21404252 MS.gene72287:intron 20.0%
!! AAACATTCATAAATAACAGA+GGG - chr8.2:21404234-21404253 MS.gene72287:intron 20.0%
!! ACAAAATTTACATTAGATAC+AGG + chr8.2:21405066-21405085 None:intergenic 20.0%
!! ACTTTGTAAAAAATTGGTAT+TGG + chr8.2:21403708-21403727 None:intergenic 20.0%
!! ATACATATTCTTTATTCTTC+AGG - chr8.2:21407768-21407787 MS.gene72287:CDS 20.0%
!! CAAAATTTACATTAGATACA+GGG + chr8.2:21405065-21405084 None:intergenic 20.0%
!! CTTTGTAAAAATATTGGTAT+TGG - chr8.2:21403594-21403613 MS.gene72287:intron 20.0%
!! GAAAAAAATCTTAATAGCTA+AGG - chr8.2:21403083-21403102 MS.gene72287:intron 20.0%
!! TAAAGGTTTAAATGTGTAAT+TGG - chr8.2:21403457-21403476 MS.gene72287:intron 20.0%
!! TAATTATATGTAACTCTTTG+TGG - chr8.2:21407484-21407503 MS.gene72287:intron 20.0%
!! TATAATTGTTGAGAAAAAAG+TGG - chr8.2:21404323-21404342 MS.gene72287:intron 20.0%
!! TGTAATTGAAAAGGAATTAA+GGG + chr8.2:21407575-21407594 None:intergenic 20.0%
!! TTAACTATTATTTAGCAAGA+AGG + chr8.2:21405705-21405724 None:intergenic 20.0%
!! TTAATTCAACATGATATACA+AGG + chr8.2:21403049-21403068 None:intergenic 20.0%
!! TTACTCTACAAATACTTTAA+AGG - chr8.2:21403440-21403459 MS.gene72287:intron 20.0%
!! TTCTTCTTTACTATCTATAT+TGG - chr8.2:21407085-21407104 MS.gene72287:intron 20.0%
!!! AAATCAAATTCTAAGAGTTT+TGG - chr8.2:21406957-21406976 MS.gene72287:intron 20.0%
!!! ACTGAAGTATTTAAGTTTTA+AGG + chr8.2:21406560-21406579 None:intergenic 20.0%
!!! ATCTAATGTAAATTTTGTAG+GGG - chr8.2:21405068-21405087 MS.gene72287:intron 20.0%
!!! ATTCTTGATTGAAGTATTAA+AGG - chr8.2:21407034-21407053 MS.gene72287:intron 20.0%
!!! ATTTAAAATGCCACTATTAT+TGG + chr8.2:21406692-21406711 None:intergenic 20.0%
!!! CTATTTTAAGTTTTTTTGCT+TGG - chr8.2:21404593-21404612 MS.gene72287:intron 20.0%
!!! GTATCTAATGTAAATTTTGT+AGG - chr8.2:21405066-21405085 MS.gene72287:intron 20.0%
!!! GTGTAAGAATTCATTTTATA+AGG - chr8.2:21402992-21403011 MS.gene72287:intron 20.0%
!!! TAGAATTTGATTTACTATGA+GGG + chr8.2:21406950-21406969 None:intergenic 20.0%
!!! TGTTTTGAAAGATATAACAA+TGG - chr8.2:21407618-21407637 MS.gene72287:intron 20.0%
!!! TTAGAATTTGATTTACTATG+AGG + chr8.2:21406951-21406970 None:intergenic 20.0%
!!! TTATTCTTCAGGTTAAAATA+CGG - chr8.2:21407779-21407798 MS.gene72287:CDS 20.0%
!!! TTCTATTACTTATTTTTCTC+TGG - chr8.2:21406784-21406803 MS.gene72287:intron 20.0%
!!! TTTAAAATGCCACTATTATT+GGG + chr8.2:21406691-21406710 None:intergenic 20.0%
!!! TTTTGTAATTTGTAGGATTA+TGG + chr8.2:21405027-21405046 None:intergenic 20.0%
! AAAATTCAATAGAATGGAAG+AGG + chr8.2:21406369-21406388 None:intergenic 25.0%
! AAAGAAGAAGTAAAAGTAGT+TGG - chr8.2:21407952-21407971 MS.gene72287:CDS 25.0%
! AAATGGATCTTATATTAAGG+GGG + chr8.2:21407377-21407396 None:intergenic 25.0%
! AAGAAGAAGTAAAAGTAGTT+GGG - chr8.2:21407953-21407972 MS.gene72287:CDS 25.0%
! AATAGCTAAGAAAATCAACA+TGG + chr8.2:21404578-21404597 None:intergenic 25.0%
! AATTTATGACTCTTTACCTA+CGG + chr8.2:21406014-21406033 None:intergenic 25.0%
! ACATAAACCTTAACTTTGTA+CGG - chr8.2:21406111-21406130 MS.gene72287:intron 25.0%
! ACTAAGTTGTTTATCCAAAT+AGG - chr8.2:21405001-21405020 MS.gene72287:intron 25.0%
! AGTAGGTTTAAATGTGTAAT+TGG + chr8.2:21403858-21403877 None:intergenic 25.0%
! ATAGCTAAGAAAATCAACAT+GGG + chr8.2:21404577-21404596 None:intergenic 25.0%
! ATTAAATCAGGTAAAAGCTA+CGG + chr8.2:21403171-21403190 None:intergenic 25.0%
! CTTTGTAAAAATATTGGCAT+TGG - chr8.2:21403548-21403567 MS.gene72287:intron 25.0%
! CTTTGTAAAAATATTGGCAT+TGG + chr8.2:21403567-21403548 None:intergenic 25.0%
! GAAATGGATCTTATATTAAG+GGG + chr8.2:21407378-21407397 None:intergenic 25.0%
! GGAAATGGATCTTATATTAA+GGG + chr8.2:21407379-21407398 None:intergenic 25.0%
! GTAATTGAAAAGGAATTAAG+GGG + chr8.2:21407574-21407593 None:intergenic 25.0%
! GTGTAATTGAAAAGGAATTA+AGG + chr8.2:21407576-21407595 None:intergenic 25.0%
! GTTCATGAATACATAAGTAA+AGG + chr8.2:21404656-21404675 None:intergenic 25.0%
! TCAGTTTAAACTGATATGAA+GGG + chr8.2:21404756-21404775 None:intergenic 25.0%
! TGGAAATGGATCTTATATTA+AGG + chr8.2:21407380-21407399 None:intergenic 25.0%
! TTAAAACTCAATTGAAGCTA+CGG + chr8.2:21403135-21403154 None:intergenic 25.0%
! TTATGAAATGGGGAAAAAAT+AGG - chr8.2:21407652-21407671 MS.gene72287:intron 25.0%
! TTATTCTTTCCCAATAATAG+TGG - chr8.2:21406679-21406698 MS.gene72287:intron 25.0%
!! ATGATTTCAGTAGAATGTTT+TGG - chr8.2:21404123-21404142 MS.gene72287:CDS 25.0%
!! ATTCGTTTTATATCCATGTT+GGG - chr8.2:21405109-21405128 MS.gene72287:intron 25.0%
!! ATTTGGTTAACATTTTGCTA+AGG - chr8.2:21407808-21407827 MS.gene72287:CDS 25.0%
!! CTTTGGAAAAATATTGGTAT+TGG + chr8.2:21403677-21403696 None:intergenic 25.0%
!! TCATTCATTTTCTTCATTCT+CGG - chr8.2:21406919-21406938 MS.gene72287:intron 25.0%
!! TGCTTTTCTGTTTATGAAAT+GGG - chr8.2:21407641-21407660 MS.gene72287:intron 25.0%
!! TTTAAGTTATTAACTGCAAG+TGG + chr8.2:21405433-21405452 None:intergenic 25.0%
!! TTTGGTTAACATTTTGCTAA+GGG - chr8.2:21407809-21407828 MS.gene72287:CDS 25.0%
!!! ACTTTTGTTATAAAGACAGT+AGG + chr8.2:21407152-21407171 None:intergenic 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG - chr8.2:21403771-21403790 MS.gene72287:intron 25.0%
!!! CAATATTTTTACAAAGTGCA+GGG + chr8.2:21403790-21403771 None:intergenic 25.0%
!!! CAATATTTTTTCAAAGTGCA+GGG + chr8.2:21403621-21403640 None:intergenic 25.0%
!!! CTTTTCTTTGAGGAAATTAT+TGG + chr8.2:21407299-21407318 None:intergenic 25.0%
!!! GTATTTTTTTCATTGTATGC+TGG - chr8.2:21406390-21406409 MS.gene72287:intron 25.0%
!!! GTCTATGTTTTTTTTGCTTA+AGG - chr8.2:21402970-21402989 MS.gene72287:intron 25.0%
!!! TACTTTTTTTTGTTTGGCAT+TGG + chr8.2:21403738-21403757 None:intergenic 25.0%
!!! TATTACTTATTTTTCTCTGG+TGG - chr8.2:21406787-21406806 MS.gene72287:intron 25.0%
AAAAATCGTATGAACAAGGA+TGG - chr8.2:21406299-21406318 MS.gene72287:intron 30.0%
AAAATCGTATGAACAAGGAT+GGG - chr8.2:21406300-21406319 MS.gene72287:intron 30.0%
AAACAGTCAATCACATGATT+TGG + chr8.2:21405594-21405613 None:intergenic 30.0%
AACACTTTCTTACCATAAAG+GGG + chr8.2:21407423-21407442 None:intergenic 30.0%
AAGTCCATAGTCTACTTATT+TGG - chr8.2:21407168-21407187 MS.gene72287:intron 30.0%
AATAGCTAAGGAAATCAACA+TGG - chr8.2:21403095-21403114 MS.gene72287:intron 30.0%
AATGGATCTTATATTAAGGG+GGG + chr8.2:21407376-21407395 None:intergenic 30.0%
ACAAACATCTTTGAGCAATA+TGG - chr8.2:21404275-21404294 MS.gene72287:intron 30.0%
ACCATTTGTGTATATCTAGT+TGG - chr8.2:21406197-21406216 MS.gene72287:intron 30.0%
ACCTACTTTAAACATCTTGA+AGG - chr8.2:21403871-21403890 MS.gene72287:intron 30.0%
ACTTATTAGAGCTTATGTAC+TGG - chr8.2:21404775-21404794 MS.gene72287:intron 30.0%
AGGATTAAAGAGAAGGAAAA+TGG - chr8.2:21407200-21407219 MS.gene72287:intron 30.0%
AGTTGAAGATGCTTGATATA+AGG + chr8.2:21403209-21403228 None:intergenic 30.0%
ATAGCTAAGGAAATCAACAT+GGG - chr8.2:21403096-21403115 MS.gene72287:intron 30.0%
ATTATAACTTCAAAGGGAAG+AGG + chr8.2:21407468-21407487 None:intergenic 30.0%
ATTGTGATATGATAGGAAAC+TGG - chr8.2:21405155-21405174 MS.gene72287:intron 30.0%
CAACACTTTCTTACCATAAA+GGG + chr8.2:21407424-21407443 None:intergenic 30.0%
CAACATGGATATAAAACGAA+TGG + chr8.2:21405110-21405129 None:intergenic 30.0%
CATGAATACATAAGTAAAGG+AGG + chr8.2:21404653-21404672 None:intergenic 30.0%
CCATTTGTGTATATCTAGTT+GGG - chr8.2:21406198-21406217 MS.gene72287:intron 30.0%
CCTGCACTTTGTAAAAATAT+TGG - chr8.2:21403542-21403561 MS.gene72287:intron 30.0%
CCTGCACTTTGTAAAAATAT+TGG + chr8.2:21403561-21403542 None:intergenic 30.0%
CTAAGTCTGTGTAATTGAAA+AGG + chr8.2:21407584-21407603 None:intergenic 30.0%
CTCAAGTTAAAGCACATTAT+TGG + chr8.2:21405816-21405835 None:intergenic 30.0%
CTGTTATAGAAGAAAGGATA+GGG - chr8.2:21405256-21405275 MS.gene72287:intron 30.0%
GACTTTCTGTTATAGAAGAA+AGG - chr8.2:21405250-21405269 MS.gene72287:intron 30.0%
GATTAAAGAGAAGGAAAATG+GGG - chr8.2:21407202-21407221 MS.gene72287:intron 30.0%
GCAATGTTGGAAATTAAATC+AGG + chr8.2:21403183-21403202 None:intergenic 30.0%
GGAGTAGAAATCATATAGAA+AGG - chr8.2:21403020-21403039 MS.gene72287:intron 30.0%
GGATTAAAGAGAAGGAAAAT+GGG - chr8.2:21407201-21407220 MS.gene72287:intron 30.0%
GTATTTGTAGAGTAACAAAG+TGG + chr8.2:21403435-21403454 None:intergenic 30.0%
GTCAGTTTAAACTGATATGA+AGG + chr8.2:21404757-21404776 None:intergenic 30.0%
GTTAGCATTAGAATTACCAA+GGG - chr8.2:21407837-21407856 MS.gene72287:CDS 30.0%
GTTGAAGATGCTTGATATAA+GGG + chr8.2:21403208-21403227 None:intergenic 30.0%
TAGAACAACTCAATCTTCAA+AGG + chr8.2:21404388-21404407 None:intergenic 30.0%
TATTAAAGGACTTCGCAAAT+TGG - chr8.2:21407048-21407067 MS.gene72287:intron 30.0%
TCAACACTTTCTTACCATAA+AGG + chr8.2:21407425-21407444 None:intergenic 30.0%
TCAAGGAATGAGAAAATTGA+TGG + chr8.2:21402795-21402814 None:intergenic 30.0%
TCTGTTATAGAAGAAAGGAT+AGG - chr8.2:21405255-21405274 MS.gene72287:intron 30.0%
TCTTGAATTGTATTGTTCCT+TGG - chr8.2:21406270-21406289 MS.gene72287:intron 30.0%
TGAAGAAAAATCGCAGAATA+AGG + chr8.2:21406428-21406447 None:intergenic 30.0%
TGTAAACAATGTTAGTCATG+AGG + chr8.2:21406094-21406113 None:intergenic 30.0%
TGTGTGTATTGTGATATGAT+AGG - chr8.2:21405148-21405167 MS.gene72287:intron 30.0%
TGTTAGCATTAGAATTACCA+AGG - chr8.2:21407836-21407855 MS.gene72287:CDS 30.0%
TGTTATAGAAGAAAGGATAG+GGG - chr8.2:21405257-21405276 MS.gene72287:intron 30.0%
TTTGGATAAACAACTTAGTG+AGG + chr8.2:21405000-21405019 None:intergenic 30.0%
! AAATGCTTTAAACGTCTTGA+AGG + chr8.2:21404186-21404205 None:intergenic 30.0%
! ACAAGTTGAAGAAGATGTTT+GGG - chr8.2:21404407-21404426 MS.gene72287:intron 30.0%
! CAAAATCTGTTAAAAGTGCA+GGG + chr8.2:21403484-21403503 None:intergenic 30.0%
! CAATATTTTTCCAAAGTGCA+GGG - chr8.2:21403681-21403700 MS.gene72287:intron 30.0%
! CATTCATTTTCTTCATTCTC+GGG - chr8.2:21406920-21406939 MS.gene72287:intron 30.0%
! CATTCGTTTTATATCCATGT+TGG - chr8.2:21405108-21405127 MS.gene72287:intron 30.0%
! CCTGCACTTTGAAAAAATAT+TGG - chr8.2:21403619-21403638 MS.gene72287:intron 30.0%
! GCCAAACAAAAAAAAGTACA+GGG - chr8.2:21403740-21403759 MS.gene72287:intron 30.0%
! GCTTTTCTGTTTATGAAATG+GGG - chr8.2:21407642-21407661 MS.gene72287:intron 30.0%
! GTGCTTTTCTGTTTATGAAA+TGG - chr8.2:21407640-21407659 MS.gene72287:intron 30.0%
! TACAAGTTGAAGAAGATGTT+TGG - chr8.2:21404406-21404425 MS.gene72287:intron 30.0%
! TATTCTGCGATTTTTCTTCA+GGG - chr8.2:21406428-21406447 MS.gene72287:intron 30.0%
! TGCCAAACAAAAAAAAGTAC+AGG - chr8.2:21403739-21403758 MS.gene72287:intron 30.0%
! TTATTCTGCGATTTTTCTTC+AGG - chr8.2:21406427-21406446 MS.gene72287:intron 30.0%
! TTTTCCTTCTCTTTAATCCT+TGG + chr8.2:21407200-21407219 None:intergenic 30.0%
!! AATATTGGCATTGGTTTGTT+TGG - chr8.2:21403557-21403576 MS.gene72287:intron 30.0%
!! AGAGTTGTTTAGAGTCATTT+TGG - chr8.2:21405299-21405318 MS.gene72287:intron 30.0%
!! CAAAATTTGTTGAAAGTGCA+GGG - chr8.2:21403831-21403850 MS.gene72287:intron 30.0%
!! CCAATATTTTTACAAAGTGC+AGG - chr8.2:21403770-21403789 MS.gene72287:intron 30.0%
!! CCAATATTTTTACAAAGTGC+AGG + chr8.2:21403789-21403770 None:intergenic 30.0%
!! CTTTCAACAAATTTTGGCAT+TGG + chr8.2:21403827-21403846 None:intergenic 30.0%
!! CTTTTAACAGATTTTGGCAT+TGG - chr8.2:21403488-21403507 MS.gene72287:intron 30.0%
!! TCTTGATAGTGAACAAACTA+GGG - chr8.2:21406864-21406883 MS.gene72287:intron 30.0%
!!! AAACTTCTGTGTTCTAGTTT+TGG + chr8.2:21406345-21406364 None:intergenic 30.0%
!!! ACCAATTTTTTACAAAGTGC+AGG - chr8.2:21403710-21403729 MS.gene72287:intron 30.0%
!!! ACTATTTTTATGATTCTCCG+AGG - chr8.2:21406985-21407004 MS.gene72287:intron 30.0%
!!! AGTATTTTAGGTTTGAAGCA+GGG + chr8.2:21405761-21405780 None:intergenic 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG - chr8.2:21403517-21403536 MS.gene72287:intron 30.0%
!!! CACTTTTTTTTGTTTGGCAT+TGG + chr8.2:21403536-21403517 None:intergenic 30.0%
!!! CATGTGGTTTTGTAATTTGT+AGG + chr8.2:21405034-21405053 None:intergenic 30.0%
!!! CCAATATTTTTTCAAAGTGC+AGG + chr8.2:21403622-21403641 None:intergenic 30.0%
!!! CCAATTTTTTACAAAGTGCA+GGG - chr8.2:21403711-21403730 MS.gene72287:intron 30.0%
!!! TCCCTGTACTTTTTTTTGTT+TGG + chr8.2:21403744-21403763 None:intergenic 30.0%
!!! TTGAGTTTTAAGACATTTCC+TGG - chr8.2:21403144-21403163 MS.gene72287:intron 30.0%
AAAGGAATTAAGGGGAAGAA+AGG + chr8.2:21407566-21407585 None:intergenic 35.0%
AAATCGTATGAACAAGGATG+GGG - chr8.2:21406301-21406320 MS.gene72287:intron 35.0%
AACAGTTATCATTGCTTGGT+AGG - chr8.2:21406602-21406621 MS.gene72287:intron 35.0%
AAGATTATAAAAGCCTGGCA+TGG - chr8.2:21404483-21404502 MS.gene72287:intron 35.0%
AGTTATTAACTGCAAGTGGA+TGG + chr8.2:21405429-21405448 None:intergenic 35.0%
ATCAAATGTGCACTTCTGTA+GGG - chr8.2:21407869-21407888 MS.gene72287:CDS 35.0%
ATCAACATGGGAAAGGATTA+AGG - chr8.2:21403108-21403127 MS.gene72287:intron 35.0%
CCCAACTAGATATACACAAA+TGG + chr8.2:21406201-21406220 None:intergenic 35.0%
CCCATTCCTAAAATCACTTT+GGG - chr8.2:21402757-21402776 MS.gene72287:CDS 35.0%
CCCTGCACTTTGTAAAAAAT+TGG + chr8.2:21403714-21403733 None:intergenic 35.0%
CTGTAACAGTTATCATTGCT+TGG - chr8.2:21406598-21406617 MS.gene72287:intron 35.0%
GAAAGAATAATGTCTCTGGT+AGG + chr8.2:21406669-21406688 None:intergenic 35.0%
GAAGGTAATTGCTAAGAAAG+AGG + chr8.2:21403310-21403329 None:intergenic 35.0%
GAATACATAAGTAAAGGAGG+AGG + chr8.2:21404650-21404669 None:intergenic 35.0%
GCATTTGTAGAGAAACAAAG+TGG - chr8.2:21404200-21404219 MS.gene72287:intron 35.0%
GCTAGAAGATTATAAAAGCC+TGG - chr8.2:21404478-21404497 MS.gene72287:intron 35.0%
GGAGAAAAATCGTATGAACA+AGG - chr8.2:21406295-21406314 MS.gene72287:intron 35.0%
GGCGTTATACTTTGTCATTA+AGG - chr8.2:21404504-21404523 MS.gene72287:intron 35.0%
GGTTCCAAATAAGTAGACTA+TGG + chr8.2:21407175-21407194 None:intergenic 35.0%
TAAGAAAATCAACATGGGCA+AGG + chr8.2:21404572-21404591 None:intergenic 35.0%
TAAGGAAATCAACATGGGAA+AGG - chr8.2:21403101-21403120 MS.gene72287:intron 35.0%
TAATGCGAAGAAGAGAAGAA+GGG + chr8.2:21402549-21402568 None:intergenic 35.0%
TATATCCATGTTGGGATCAT+TGG - chr8.2:21405117-21405136 MS.gene72287:intron 35.0%
TATTATAACTTCCTCGTCCT+CGG + chr8.2:21407005-21407024 None:intergenic 35.0%
TATTCCTTTCACCATTCTAG+TGG + chr8.2:21402500-21402519 None:intergenic 35.0%
TGGAATTCACATGAAACTTC+TGG + chr8.2:21407400-21407419 None:intergenic 35.0%
TTAGATGGACCTCATAAGAA+CGG - chr8.2:21405890-21405909 MS.gene72287:intron 35.0%
TTCAACAACCCTCTCTTATT+GGG - chr8.2:21407344-21407363 MS.gene72287:intron 35.0%
TTGGGAAAGAATAATGTCTC+TGG + chr8.2:21406673-21406692 None:intergenic 35.0%
TTGTAGGATTATGGCCTATT+TGG + chr8.2:21405018-21405037 None:intergenic 35.0%
TTTCAACAACCCTCTCTTAT+TGG - chr8.2:21407343-21407362 MS.gene72287:intron 35.0%
TTTCTTAGTCCGAAAAGTCT+TGG + chr8.2:21404022-21404041 None:intergenic 35.0%
TTTGTAGAGTAACAAAGTGG+TGG + chr8.2:21403432-21403451 None:intergenic 35.0%
! AACAGACCCAAAGTGATTTT+AGG + chr8.2:21402766-21402785 None:intergenic 35.0%
! AAGCATTTTGTGGTACTACT+TGG - chr8.2:21404801-21404820 MS.gene72287:intron 35.0%
! AATAAAGTACTCCAACTACC+AGG - chr8.2:21403936-21403955 MS.gene72287:intron 35.0%
! AGTTTGTTCACTATCAAGAC+AGG + chr8.2:21406863-21406882 None:intergenic 35.0%
! ATTCTGCGATTTTTCTTCAG+GGG - chr8.2:21406429-21406448 MS.gene72287:intron 35.0%
! CCAAAATCTGTTAAAAGTGC+AGG + chr8.2:21403485-21403504 None:intergenic 35.0%
! CCAATATTTTTCCAAAGTGC+AGG - chr8.2:21403680-21403699 MS.gene72287:intron 35.0%
! CCTGCACTTTCAACAAATTT+TGG + chr8.2:21403833-21403852 None:intergenic 35.0%
! CCTGCACTTTGGAAAAATAT+TGG + chr8.2:21403683-21403702 None:intergenic 35.0%
! CCTGCACTTTTAACAGATTT+TGG - chr8.2:21403482-21403501 MS.gene72287:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG - chr8.2:21403800-21403819 MS.gene72287:intron 35.0%
! GCCAAACAAAAAAAAGTGCA+GGG + chr8.2:21403819-21403800 None:intergenic 35.0%
! GCCTTCAAGATGTTTAAAGT+AGG + chr8.2:21403875-21403894 None:intergenic 35.0%
! GTTGATACGACTTTTCTTTG+AGG + chr8.2:21407309-21407328 None:intergenic 35.0%
! TACTTATTTGGAACCATCCA+AGG - chr8.2:21407180-21407199 MS.gene72287:intron 35.0%
! TCACATGAAACTTCTGGAAA+TGG + chr8.2:21407394-21407413 None:intergenic 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG - chr8.2:21403799-21403818 MS.gene72287:intron 35.0%
! TGCCAAACAAAAAAAAGTGC+AGG + chr8.2:21403818-21403799 None:intergenic 35.0%
! TTCTTCTTTTGCTCTTCTGA+GGG + chr8.2:21407713-21407732 None:intergenic 35.0%
! TTGTTTCTCCAGCATTGTAA+GGG - chr8.2:21405394-21405413 MS.gene72287:intron 35.0%
! TTTATCCCTCCAAGACTTTT+CGG - chr8.2:21404010-21404029 MS.gene72287:intron 35.0%
! TTTCTTCTTTTGCTCTTCTG+AGG + chr8.2:21407714-21407733 None:intergenic 35.0%
! TTTGTTTCTCCAGCATTGTA+AGG - chr8.2:21405393-21405412 MS.gene72287:intron 35.0%
!! ACCCAAAGTGATTTTAGGAA+TGG + chr8.2:21402761-21402780 None:intergenic 35.0%
!! ATTTTGGAGAGTTCTCTCTT+TGG - chr8.2:21405315-21405334 MS.gene72287:intron 35.0%
!! CAAAGTGATTTTAGGAATGG+GGG + chr8.2:21402758-21402777 None:intergenic 35.0%
!! CCAAAATTTGTTGAAAGTGC+AGG - chr8.2:21403830-21403849 MS.gene72287:intron 35.0%
!! CCAAAGTGATTTTAGGAATG+GGG + chr8.2:21402759-21402778 None:intergenic 35.0%
!! CCCAAAGTGATTTTAGGAAT+GGG + chr8.2:21402760-21402779 None:intergenic 35.0%
!! CTTGATAGTGAACAAACTAG+GGG - chr8.2:21406865-21406884 MS.gene72287:intron 35.0%
!! GTACTGGTATAAGCATTTTG+TGG - chr8.2:21404791-21404810 MS.gene72287:intron 35.0%
!! GTCTTGATAGTGAACAAACT+AGG - chr8.2:21406863-21406882 MS.gene72287:intron 35.0%
!! TACTTATTTTTCTCTGGTGG+TGG - chr8.2:21406790-21406809 MS.gene72287:intron 35.0%
!! TGATTTGGTAGTGATGAGAA+AGG + chr8.2:21405579-21405598 None:intergenic 35.0%
!! TTGATAGTGAACAAACTAGG+GGG - chr8.2:21406866-21406885 MS.gene72287:intron 35.0%
!!! AGCTCAAGCAAGAGTATTTT+AGG + chr8.2:21405773-21405792 None:intergenic 35.0%
!!! CTGTTGTCTCAGTTTTATTG+TGG - chr8.2:21407233-21407252 MS.gene72287:intron 35.0%
!!! GAGTATTTTAGGTTTGAAGC+AGG + chr8.2:21405762-21405781 None:intergenic 35.0%
!!! GCTTTTGAAATGTTGAGTCA+TGG - chr8.2:21405644-21405663 MS.gene72287:intron 35.0%
!!! GGAGTGACTTGCTTTTTTAT+AGG + chr8.2:21404683-21404702 None:intergenic 35.0%
!!! TATTCCTTTTGCTGTTGAGT+TGG - chr8.2:21407113-21407132 MS.gene72287:intron 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG - chr8.2:21403511-21403530 MS.gene72287:intron 35.0%
!!! TCCCTGCACTTTTTTTTGTT+TGG + chr8.2:21403530-21403511 None:intergenic 35.0%
AAATAGCAACACCTGGTAGT+TGG + chr8.2:21403950-21403969 None:intergenic 40.0%
AATGCGAAGAAGAGAAGAAG+GGG + chr8.2:21402548-21402567 None:intergenic 40.0%
ACAACCACTAGAATGGTGAA+AGG - chr8.2:21402493-21402512 MS.gene72287:CDS 40.0%
ACGACATGTCATATCCTAGA+AGG + chr8.2:21407516-21407535 None:intergenic 40.0%
ACTTAATGCCCTTACAATGC+TGG + chr8.2:21405405-21405424 None:intergenic 40.0%
ACTTCAGTGAGACCTAAGAA+TGG - chr8.2:21406572-21406591 MS.gene72287:intron 40.0%
ACTTTCTTACCATAAAGGGG+TGG + chr8.2:21407420-21407439 None:intergenic 40.0%
ATACACGATGTCTCAACAGA+AGG + chr8.2:21403328-21403347 None:intergenic 40.0%
ATACAGGGTCTAAACACATG+TGG + chr8.2:21405050-21405069 None:intergenic 40.0%
ATACATGCACCGTTCTTATG+AGG + chr8.2:21405902-21405921 None:intergenic 40.0%
ATATTGGTATTTGTGCCACG+TGG - chr8.2:21403635-21403654 MS.gene72287:intron 40.0%
ATGAACTCCTAACCAAAGCT+AGG + chr8.2:21405349-21405368 None:intergenic 40.0%
ATGGCAACCGTACAAAGTTA+AGG + chr8.2:21406121-21406140 None:intergenic 40.0%
ATGTGAATTCCACCCCTTTA+TGG - chr8.2:21407408-21407427 MS.gene72287:intron 40.0%
CAAACGTCTCAAAAGCAAGA+AGG - chr8.2:21407908-21407927 MS.gene72287:CDS 40.0%
CAGGGAGAAGATTATGCAAA+TGG - chr8.2:21405538-21405557 MS.gene72287:intron 40.0%
CATCAAATGTGCACTTCTGT+AGG - chr8.2:21407868-21407887 MS.gene72287:CDS 40.0%
CATGGGCAAGGATTTAAGAA+CGG + chr8.2:21404560-21404579 None:intergenic 40.0%
CCATCCAAGGATTAAAGAGA+AGG - chr8.2:21407193-21407212 MS.gene72287:intron 40.0%
CCCCATTCCTAAAATCACTT+TGG - chr8.2:21402756-21402775 MS.gene72287:CDS 40.0%
CCTTCTCTTTAATCCTTGGA+TGG + chr8.2:21407196-21407215 None:intergenic 40.0%
CGACATGTCATATCCTAGAA+GGG + chr8.2:21407515-21407534 None:intergenic 40.0%
CTGTTACAGAACCCATTCTT+AGG + chr8.2:21406587-21406606 None:intergenic 40.0%
CTTCAGTGAGACCTAAGAAT+GGG - chr8.2:21406573-21406592 MS.gene72287:intron 40.0%
GAAGATGCTTGATATAAGGG+AGG + chr8.2:21403205-21403224 None:intergenic 40.0%
GAATTGTATTGTTCCTTGGC+AGG - chr8.2:21406274-21406293 MS.gene72287:intron 40.0%
GGAATTCACCCAATAAGAGA+GGG + chr8.2:21407355-21407374 None:intergenic 40.0%
GGTAATTGCTAAGAAAGAGG+TGG + chr8.2:21403307-21403326 None:intergenic 40.0%
GTAATGCGAAGAAGAGAAGA+AGG + chr8.2:21402550-21402569 None:intergenic 40.0%
GTTATAAAGACAGTAGGACG+CGG + chr8.2:21407146-21407165 None:intergenic 40.0%
GTTGAAATACCAACACCTTG+TGG - chr8.2:21404075-21404094 MS.gene72287:intron 40.0%
TAGAGCCTGAATAGGGAAAT+AGG - chr8.2:21405196-21405215 MS.gene72287:intron 40.0%
TCAGTTGAAATAGCAACACC+TGG + chr8.2:21403957-21403976 None:intergenic 40.0%
TCGTTCCTATTTCCCTATTC+AGG + chr8.2:21405204-21405223 None:intergenic 40.0%
TGATATAAGGGAGGCAATGT+TGG + chr8.2:21403196-21403215 None:intergenic 40.0%
TGATTGTACAGTGAACACCA+AGG - chr8.2:21405466-21405485 MS.gene72287:intron 40.0%
TTAGTCCGAAAAGTCTTGGA+GGG + chr8.2:21404018-21404037 None:intergenic 40.0%
TTCCCTATTCAGGCTCTATT+GGG + chr8.2:21405194-21405213 None:intergenic 40.0%
TTTCCCTATTCAGGCTCTAT+TGG + chr8.2:21405195-21405214 None:intergenic 40.0%
TTTCTTCAGGGGTAACATTG+AGG - chr8.2:21406440-21406459 MS.gene72287:intron 40.0%
! AAGAAGATGTTTGGGATGAC+AGG - chr8.2:21404415-21404434 MS.gene72287:intron 40.0%
! ACTGTGAATTTTGCCAGAAG+TGG - chr8.2:21402893-21402912 MS.gene72287:intron 40.0%
! ATAAAGTACCTGCAACCACA+AGG + chr8.2:21404093-21404112 None:intergenic 40.0%
! ATACGATTTTTCTCCTGCCA+AGG + chr8.2:21406290-21406309 None:intergenic 40.0%
! ATCTGCAACTTGTTCTTCAG+CGG - chr8.2:21403266-21403285 MS.gene72287:intron 40.0%
! ATTTGATGGTTACAAGCCCT+TGG + chr8.2:21407856-21407875 None:intergenic 40.0%
! CTACAGAAGTGCACATTTGA+TGG + chr8.2:21407870-21407889 None:intergenic 40.0%
! GGAACAACAAAGTATCCTCT+CGG - chr8.2:21402668-21402687 MS.gene72287:intron 40.0%
! TAAGAACGGTGGCTTCATTT+TGG + chr8.2:21404546-21404565 None:intergenic 40.0%
! TCAATGTTGGAAAGGCACAT+TGG - chr8.2:21405501-21405520 MS.gene72287:intron 40.0%
! TTGTATGCTGGCTGTAAGAT+TGG - chr8.2:21406402-21406421 MS.gene72287:intron 40.0%
!! AAAGTGTTGAGAGTGAGTGT+CGG - chr8.2:21407435-21407454 MS.gene72287:intron 40.0%
!! TAGCTTTGGTTAGGAGTTCA+TGG - chr8.2:21405348-21405367 MS.gene72287:intron 40.0%
AAGAGAAGGAAAATGGGGTG+TGG - chr8.2:21407207-21407226 MS.gene72287:intron 45.0%
AAGCCCAATAGAGCCTGAAT+AGG - chr8.2:21405188-21405207 MS.gene72287:intron 45.0%
ACAAAGTATAACGCCATGCC+AGG + chr8.2:21404499-21404518 None:intergenic 45.0%
AGAGTCCAAGAATACCTCGA+CGG + chr8.2:21403386-21403405 None:intergenic 45.0%
AGCCCAATAGAGCCTGAATA+GGG - chr8.2:21405189-21405208 MS.gene72287:intron 45.0%
AGCGGAGATAGATCGATGTT+CGG + chr8.2:21402725-21402744 None:intergenic 45.0%
AGTTAGAAGCTCGTCCCAAT+TGG - chr8.2:21406058-21406077 MS.gene72287:intron 45.0%
ATAGGGAAATAGGAACGACG+CGG - chr8.2:21405206-21405225 MS.gene72287:intron 45.0%
ATGCGAAGAAGAGAAGAAGG+GGG + chr8.2:21402547-21402566 None:intergenic 45.0%
ATTGGCTAAGTGAAAGGGTC+AGG - chr8.2:21405519-21405538 MS.gene72287:intron 45.0%
CAAAGAAGTTTGTACCGTCG+AGG - chr8.2:21403369-21403388 MS.gene72287:intron 45.0%
CATGCGGTTCAATGTTGGAA+AGG - chr8.2:21405493-21405512 MS.gene72287:intron 45.0%
CCACGTGGCATGAAATGATT+GGG - chr8.2:21403650-21403669 MS.gene72287:intron 45.0%
CCATACCAATGATCCCAACA+TGG + chr8.2:21405125-21405144 None:intergenic 45.0%
CCATGTTGGGATCATTGGTA+TGG - chr8.2:21405122-21405141 MS.gene72287:intron 45.0%
CTTAGTCCGAAAAGTCTTGG+AGG + chr8.2:21404019-21404038 None:intergenic 45.0%
CTTCCTCAGCTTCAGATTCT+GGG - chr8.2:21402647-21402666 MS.gene72287:intron 45.0%
GAAGAGAGGAGAGGAAGAAA+GGG + chr8.2:21402588-21402607 None:intergenic 45.0%
GAGCGGTATTCTGTTAGGAT+GGG - chr8.2:21405228-21405247 MS.gene72287:intron 45.0%
GCTGTAATTGAAGAGAGGAG+AGG + chr8.2:21402597-21402616 None:intergenic 45.0%
GGCTTCAACAACCACTAGAA+TGG - chr8.2:21402486-21402505 MS.gene72287:CDS 45.0%
GGGAATTCACCCAATAAGAG+AGG + chr8.2:21407356-21407375 None:intergenic 45.0%
GGGACGAGCTTCTAACTTAT+AGG + chr8.2:21406055-21406074 None:intergenic 45.0%
GGGGGTCAGAATGTCAATAA+AGG - chr8.2:21402923-21402942 MS.gene72287:intron 45.0%
GGGTAACATTGAGGATGCTT+TGG - chr8.2:21406449-21406468 MS.gene72287:intron 45.0%
GTGTTCACTGTACAATCAGC+AGG + chr8.2:21405464-21405483 None:intergenic 45.0%
GTTAGAAGCTCGTCCCAATT+GGG - chr8.2:21406059-21406078 MS.gene72287:intron 45.0%
GTTAGGAGTTCATGGAACTC+TGG - chr8.2:21405356-21405375 MS.gene72287:intron 45.0%
TAGATCGATGTTCGGCTTCT+TGG + chr8.2:21402717-21402736 None:intergenic 45.0%
TCCACCAACTCAACAGCAAA+AGG + chr8.2:21407120-21407139 None:intergenic 45.0%
TGAAGAGAGGAGAGGAAGAA+AGG + chr8.2:21402589-21402608 None:intergenic 45.0%
TTATTGACATTCTGACCCCC+AGG + chr8.2:21402923-21402942 None:intergenic 45.0%
TTGGATAGAGAGCCTAGCTT+TGG - chr8.2:21405334-21405353 MS.gene72287:intron 45.0%
TTGGCTAAGTGAAAGGGTCA+GGG - chr8.2:21405520-21405539 MS.gene72287:intron 45.0%
TTTATGATTCTCCGAGGACG+AGG - chr8.2:21406991-21407010 MS.gene72287:intron 45.0%
! AGGCACATTGGCTAAGTGAA+AGG - chr8.2:21405513-21405532 MS.gene72287:intron 45.0%
! CTTTGTGGTTAGTCCCTTCT+AGG - chr8.2:21407499-21407518 MS.gene72287:intron 45.0%
! GATGTTTGGGATGACAGGTT+TGG - chr8.2:21404420-21404439 MS.gene72287:intron 45.0%
! GCTAATAGGGACTTTTCCGT+AGG - chr8.2:21405995-21406014 MS.gene72287:intron 45.0%
! GGCACATTGGCTAAGTGAAA+GGG - chr8.2:21405514-21405533 MS.gene72287:intron 45.0%
! GTGAATTTTGCCAGAAGTGG+AGG - chr8.2:21402896-21402915 MS.gene72287:intron 45.0%
! TCTGCAACTTGTTCTTCAGC+GGG - chr8.2:21403267-21403286 MS.gene72287:intron 45.0%
! TTGTACCGTCGAGGTATTCT+TGG - chr8.2:21403378-21403397 MS.gene72287:intron 45.0%
!! GGCATTGGTTTGTTTGGCAT+TGG - chr8.2:21403563-21403582 MS.gene72287:intron 45.0%
!! TAGAGAGCCTAGCTTTGGTT+AGG - chr8.2:21405339-21405358 MS.gene72287:intron 45.0%
!! TTCTTTTGCTCTTCTGAGGG+AGG + chr8.2:21407710-21407729 None:intergenic 45.0%
!!! ATTTTTCTCTGGTGGTGGTG+AGG - chr8.2:21406795-21406814 MS.gene72287:intron 45.0%
!!! TCCTTTTGCTGTTGAGTTGG+TGG - chr8.2:21407116-21407135 MS.gene72287:intron 45.0%
!! TATATATATATATATATTCA+AGG + chr8.2:21402812-21402831 None:intergenic 5.0%
AGAGGAAGAAAGGGCGAGAA+AGG + chr8.2:21402579-21402598 None:intergenic 50.0%
AGAGGGCAAGAATATCTCGC+TGG - chr8.2:21404251-21404270 MS.gene72287:intron 50.0%
ATTGAACCGCATGTCGACCT+TGG + chr8.2:21405486-21405505 None:intergenic 50.0%
CCCAATCATTTCATGCCACG+TGG + chr8.2:21403653-21403672 None:intergenic 50.0%
CTAGGGGGAAATTGCAGCTT+AGG - chr8.2:21406881-21406900 MS.gene72287:intron 50.0%
GAGACGTTTGTGCTCTCCTA+TGG + chr8.2:21407898-21407917 None:intergenic 50.0%
GCCACGTGGCATGAAATGAT+TGG - chr8.2:21403649-21403668 MS.gene72287:intron 50.0%
GCTTCCTCAGCTTCAGATTC+TGG - chr8.2:21402646-21402665 MS.gene72287:intron 50.0%
GGAGCGGTATTCTGTTAGGA+TGG - chr8.2:21405227-21405246 MS.gene72287:intron 50.0%
GGATGCTTTGGCAAAGCTTC+AGG - chr8.2:21406461-21406480 MS.gene72287:intron 50.0%
GGGCAAGGATTTAAGAACGG+TGG + chr8.2:21404557-21404576 None:intergenic 50.0%
GTCGACATGCGGTTCAATGT+TGG - chr8.2:21405488-21405507 MS.gene72287:intron 50.0%
GTGTAGCAGAGAGGTAACAG+AGG + chr8.2:21404704-21404723 None:intergenic 50.0%
GTTGAGTCATGGCGTAGTAG+AGG - chr8.2:21405655-21405674 MS.gene72287:intron 50.0%
TACCAACACCTTGTGGTTGC+AGG - chr8.2:21404082-21404101 MS.gene72287:intron 50.0%
TACCTGCAACCACAAGGTGT+TGG + chr8.2:21404087-21404106 None:intergenic 50.0%
TCACTCACTGTGTAGCAGAG+AGG + chr8.2:21404713-21404732 None:intergenic 50.0%
TCAGGTAAAAGCTACGGTCC+AGG + chr8.2:21403165-21403184 None:intergenic 50.0%
TGAACACCAAGGTCGACATG+CGG - chr8.2:21405477-21405496 MS.gene72287:intron 50.0%
! CGAGCGCTGTAATTGAAGAG+AGG + chr8.2:21402602-21402621 None:intergenic 50.0%
! GTTCCCAGAATCTGAAGCTG+AGG + chr8.2:21402653-21402672 None:intergenic 50.0%
!! AAGAAGGGGGTGTTGAAGAG+AGG + chr8.2:21402534-21402553 None:intergenic 50.0%
!! AATGGGGGCGTTGTAATCAG+CGG + chr8.2:21402743-21402762 None:intergenic 50.0%
!! TGGTATTGGTCCCTGCACTT+TGG + chr8.2:21403627-21403608 None:intergenic 50.0%
!! TTTTGCTCTTCTGAGGGAGG+TGG + chr8.2:21407707-21407726 None:intergenic 50.0%
ACGCGGAGCGGTATTCTGTT+AGG - chr8.2:21405223-21405242 MS.gene72287:intron 55.0%
AGCGCATCGAATTGCAGTGG+CGG + chr8.2:21402629-21402648 None:intergenic 55.0%
AGTATCCTCTCGGCTTTCGC+AGG - chr8.2:21402678-21402697 MS.gene72287:intron 55.0%
CACTTCTGTAGGGCTGCCAT+AGG - chr8.2:21407879-21407898 MS.gene72287:CDS 55.0%
CGGCTTCTTGGAGAAGCTCA+TGG + chr8.2:21402705-21402724 None:intergenic 55.0%
GAAATAGGAACGACGCGGAG+CGG - chr8.2:21405211-21405230 MS.gene72287:intron 55.0%
GAGGCAACTGCAGCCCAATT+GGG + chr8.2:21406075-21406094 None:intergenic 55.0%
GGATGACAGGTTTGGCAGCT+TGG - chr8.2:21404428-21404447 MS.gene72287:intron 55.0%
TGAGGCAACTGCAGCCCAAT+TGG + chr8.2:21406076-21406095 None:intergenic 55.0%
TTGCCAGAAGTGGAGGACCT+GGG - chr8.2:21402903-21402922 MS.gene72287:intron 55.0%
TTTGCCAGAAGTGGAGGACC+TGG - chr8.2:21402902-21402921 MS.gene72287:intron 55.0%
! GGAAGCGCATCGAATTGCAG+TGG + chr8.2:21402632-21402651 None:intergenic 55.0%
!! TCTCTGGTGGTGGTGAGGTT+GGG - chr8.2:21406800-21406819 MS.gene72287:intron 55.0%
!! TTCTCTGGTGGTGGTGAGGT+TGG - chr8.2:21406799-21406818 MS.gene72287:intron 55.0%
ATGGACCTGCGAAAGCCGAG+AGG + chr8.2:21402686-21402705 None:intergenic 60.0%
GCGCATCGAATTGCAGTGGC+GGG + chr8.2:21402628-21402647 None:intergenic 60.0%
TGCCAGAAGTGGAGGACCTG+GGG - chr8.2:21402904-21402923 MS.gene72287:intron 60.0%
! GCTCTTCTGAGGGAGGTGGT+GGG + chr8.2:21407703-21407722 None:intergenic 60.0%
! TGCTCTTCTGAGGGAGGTGG+TGG + chr8.2:21407704-21407723 None:intergenic 60.0%
ACCCCCAGGTCCTCCACTTC+TGG + chr8.2:21402909-21402928 None:intergenic 65.0%
GCCAGAAGTGGAGGACCTGG+GGG - chr8.2:21402905-21402924 MS.gene72287:intron 65.0%
!! CTGGTGGTGGTGAGGTTGGG+AGG - chr8.2:21406803-21406822 MS.gene72287:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 21402475 21407980 21402475 ID=MS.gene72287
chr8.2 mRNA 21402475 21407980 21402475 ID=MS.gene72287.t1;Parent=MS.gene72287
chr8.2 exon 21407677 21407980 21407677 ID=MS.gene72287.t1.exon1;Parent=MS.gene72287.t1
chr8.2 CDS 21407677 21407980 21407677 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21407511 21407570 21407511 ID=MS.gene72287.t1.exon2;Parent=MS.gene72287.t1
chr8.2 CDS 21407511 21407570 21407511 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21404896 21404978 21404896 ID=MS.gene72287.t1.exon3;Parent=MS.gene72287.t1
chr8.2 CDS 21404896 21404978 21404896 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21404095 21404159 21404095 ID=MS.gene72287.t1.exon4;Parent=MS.gene72287.t1
chr8.2 CDS 21404095 21404159 21404095 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21403973 21404006 21403973 ID=MS.gene72287.t1.exon5;Parent=MS.gene72287.t1
chr8.2 CDS 21403973 21404006 21403973 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21402711 21402781 21402711 ID=MS.gene72287.t1.exon6;Parent=MS.gene72287.t1
chr8.2 CDS 21402711 21402781 21402711 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
chr8.2 exon 21402475 21402565 21402475 ID=MS.gene72287.t1.exon7;Parent=MS.gene72287.t1
chr8.2 CDS 21402475 21402565 21402475 ID=cds.MS.gene72287.t1;Parent=MS.gene72287.t1
Gene Sequence

>MS.gene72287

ATGTATGGTATGGCTTCAACAACCACTAGAATGGTGAAAGGAATATTGCTATTACACCTCTCTTCAACACCCCCTTCTTCTCTTCTTCGCATTACTCGCGACCTTTCTCGCCCTTTCTTCCTCTCCTCTCTTCAATTACAGCGCTCGCATCCCGCCACTGCAATTCGATGCGCTTCCTCAGCTTCAGATTCTGGGAACAACAAAGTATCCTCTCGGCTTTCGCAGGTCCATGAGCTTCTCCAAGAAGCCGAACATCGATCTATCTCCGCTGATTACAACGCCCCCATTCCTAAAATCACTTTGGGTCTGTTTTGTTTCCATCAATTTTCTCATTCCTTGAATATATATATATATATATATATGCTGCAAAAAACATGTTTTGATTTTTATATAATTTTGTTGGGTTTCAGATCATGTTACTGTGAATTTTGCCAGAAGTGGAGGACCTGGGGGTCAGAATGTCAATAAAGGTTGTTTTTTTGTTCTATTTTCTATGTCTATGTTTTTTTTGCTTAAGGTGTAAGAATTCATTTTATAAGGTATTAGGAGTAGAAATCATATAGAAAGGCTTCCTTGTATATCATGTTGAATTAATTTATTGTGATAAAGAAAAAAATCTTAATAGCTAAGGAAATCAACATGGGAAAGGATTAAGGACCGTAGCTTCAATTGAGTTTTAAGACATTTCCTGGACCGTAGCTTTTACCTGATTTAATTTCCAACATTGCCTCCCTTATATCAAGCATCTTCAACTTGTAAAATAAATCAATCTTCAAAGGTTTTGTAAAAATATCTGCAACTTGTTCTTCAGCGGGACAATATTTGATCACCACCTCTTTCTTAGCAATTACCTTCTGTTGAGACATCGTGTATCGTGTTGTTAACTGATGCACTCAAAGAAGTTTGTACCGTCGAGGTATTCTTGGACTCTGTCTTTTGAATGCTTTGATTCTGCCACCACTTTGTTACTCTACAAATACTTTAAAGGTTTAAATGTGTAATTGGTCCCTGCACTTTTAACAGATTTTGGCATTGGTCCCTGCACTTTTTTTTGTTTGGCATTGGTCCCTGCACTTTGTAAAAATATTGGCATTGGTTTGTTTGGCATTGGTCCCTGCACTTTGTAAAAATATTGGTATTGGTCCCTGCACTTTGAAAAAATATTGGTATTTGTGCCACGTGGCATGAAATGATTGGGACCAATACCAATATTTTTCCAAAGTGCAGGGACCAATACCAATTTTTTACAAAGTGCAGGGACCAATGCCAAACAAAAAAAAGTACAGGGACCAATGCCAATATTTTTACAAAGTGCAGGGACCAATGCCAAACAAAAAAAAGTGCAGGGACCAATGCCAAAATTTGTTGAAAGTGCAGGGACCAATTACACATTTAAACCTACTTTAAACATCTTGAAGGCATCACAAGCTTATGTTTTCTGCTAAGTTCAGCGATAAAAGAAATAAAGTACTCCAACTACCAGGTGTTGCTATTTCAACTGAACACAAGTTTGAATGAACTATTTCGAGTACTTTTTTATCCCTCCAAGACTTTTCGGACTAAGAAACTGCTAGAGATAGTTTATTTAGACTTGTGTTCAGTTGAAATACCAACACCTTGTGGTTGCAGGTACTTTATTACTTTATTGATGATTTCAGTAGAATGTTTTGGATATATTTTGTGAAGTAGAAATCATAAGCTTGTGATGCCTTCAAGACGTTTAAAGCATTTGTAGAGAAACAAAGTGGTTGCATAATCAAAACATTCATAAATAACAGAGGGCAAGAATATCTCGCTGGTACAAACATCTTTGAGCAATATGGACTCGAGCATCAATTAACAATAAGATATAATTGTTGAGAAAAAAGTGGTGATCACTGAAAAAACAAGCTGCAGATATTTTTATAAAACCTTTGAAGATTGAGTTGTTCTACAAGTTGAAGAAGATGTTTGGGATGACAGGTTTGGCAGCTTGGCAATGTTCGAAATTAAATCAAGTAAATGCTAGAAGATTATAAAAGCCTGGCATGGCGTTATACTTTGTCATTAAGGAAATGTCTTAAATTGACCAAAATGAAGCCACCGTTCTTAAATCCTTGCCCATGTTGATTTTCTTAGCTATTTTAAGTTTTTTTGCTTGGAGATTAAGAATAGTATGATCAAAGTGCAACTCCTCCTCCTTTACTTATGTATTCATGAACTAAGCCTATAAAAAAGCAAGTCACTCCTCTGTTACCTCTCTGCTACACAGTGAGTGAGTTTTGTGCTGTTATAATGTCCCTTCATATCAGTTTAAACTGACTTATTAGAGCTTATGTACTGGTATAAGCATTTTGTGGTACTACTTGGAGAGAGCTTGTGAAATTAACTTATGACACATTCATAAGTTGTTTTCTGTTTAGTTCTATTAACTCTTTATTATAACTTATGAAAACAACTTATAATTTATATGAAAACAATTTGACTTTATTTTATCATTTGTTATAGAAGTAGCTTATTCATAAATGCTCATGCTATAAGCGCCTCACTAAGTTGTTTATCCAAATAGGCCATAATCCTACAAATTACAAAACCACATGTGTTTAGACCCTGTATCTAATGTAAATTTTGTAGGGGTTTAAAACATATTTAACCATTCGTTTTATATCCATGTTGGGATCATTGGTATGGTACTGTGTGTATTGTGATATGATAGGAAACTGGATTTGTACTTAAGCCCAATAGAGCCTGAATAGGGAAATAGGAACGACGCGGAGCGGTATTCTGTTAGGATGGGACTTTCTGTTATAGAAGAAAGGATAGGGGAGTGAGTAAAGCATTCAAGAGAGTTGTTTAGAGTCATTTTGGAGAGTTCTCTCTTTGGATAGAGAGCCTAGCTTTGGTTAGGAGTTCATGGAACTCTGGTTTATGCATTTCATTTTGTTTCTCCAGCATTGTAAGGGCATTAAGTTCCATCCACTTGCAGTTAATAACTTAAAAACGTTTACCTGCTGATTGTACAGTGAACACCAAGGTCGACATGCGGTTCAATGTTGGAAAGGCACATTGGCTAAGTGAAAGGGTCAGGGAGAAGATTATGCAAATGGTTTGTGTCAGCTAATCCTTTCTCATCACTACCAAATCATGTGATTGACTGTTTGTTTGTTTGTTATATGTCAAATATTTACAAGCTTTTGAAATGTTGAGTCATGGCGTAGTAGAGGAGCTTCTGTGATCTAGAGTTTAATCCTTCTTGCTAAATAATAGTTAAATTTCATACAAAATGGGCTGATTTGCTCATCATCCCTGCTTCAAACCTAAAATACTCTTGCTTGAGCTGATTTTGTTAAATGATGAAACCAATAATGTGCTTTAACTTGAGTTTTTGATATCGTGCTTGTTTGCATAAATTTGTCAAGAATATAGAAAAAAAATATTAGATGGACCTCATAAGAACGGTGCATGTATAGATTAAAAGTAGCTATTGTATCTCAGTTTTTTCATAAACTTGCCCTTTCTTTTTCTCTATAAATATTTGTAAGCTAATAGGGACTTTTCCGTAGGTAAAGAGTCATAAATTTATTTTAATTGAAAAACTCCTATAAGTTAGAAGCTCGTCCCAATTGGGCTGCAGTTGCCTCATGACTAACATTGTTTACATAAACCTTAACTTTGTACGGTTGCCATTATTTATAAGAAACATATTTATAGGAAACACATAATGATATTATATATTTATTTATACCATTTGTGTATATCTAGTTGGGCTTCAATTTTGTGTTACATTAACTTATAATCTACTTTATATTTTAACAATCTTGAATTGTATTGTTCCTTGGCAGGAGAAAAATCGTATGAACAAGGATGGGGAGCTTGTGATTTCTTCAACCAAAACTAGAACACAGAAGTTTGCCTCTTCCATTCTATTGAATTTTTGTATTTTTTTCATTGTATGCTGGCTGTAAGATTGGCCTTATTCTGCGATTTTTCTTCAGGGGTAACATTGAGGATGCTTTGGCAAAGCTTCAGGTATCTAAATATTTTTTTTTAAACTGCTTAATAGCTTGTTTTAGTATCACATATTATTGACAAATAACATATCTCCTTAAAACTTAAATACTTCAGTGAGACCTAAGAATGGGTTCTGTAACAGTTATCATTGCTTGGTAGGTTACAAATGATTATGTTTTTATAGCTCTCGAATCTTAGTCTCCTACCAGAGACATTATTCTTTCCCAATAATAGTGGCATTTTAAATGAAACTTTCTGTCATGAATGTGACGTTGTGTAAGCTATAGAAGAAAAACTTTTACTTTCTAGTAGTACTGAATTCTATTACTTATTTTTCTCTGGTGGTGGTGAGGTTGGGAGGAGTTTGCTCTGAATTGTTCTGTTTGCAAAACAATCCTGTCTTGATAGTGAACAAACTAGGGGGAAATTGCAGCTTAGGATAGTGAAAGATATCTCATTCATTTTCTTCATTCTCGGGTATTCCCTCATAGTAAATCAAATTCTAAGAGTTTTGGTTCTGACTATTTTTATGATTCTCCGAGGACGAGGAAGTTATAATAATATCGTGAATTCTTGATTGAAGTATTAAAGGACTTCGCAAATTGGTTTCTTTTTTCTACTTCTTCTTTACTATCTATATTGGTTGTCTATTCCTTTTGCTGTTGAGTTGGTGGATTGCCGCGTCCTACTGTCTTTATAACAAAAGTCCATAGTCTACTTATTTGGAACCATCCAAGGATTAAAGAGAAGGAAAATGGGGTGTGGTGACTGTTGTCTCAGTTTTATTGTGGCGCATATAAAATGCAATATATGAGAAATCTTATAAGCATTCCAATAATTTCCTCAAAGAAAAGTCGTATCAACAGTCACTTCACTCTTTTCAACAACCCTCTCTTATTGGGTGAATTCCCCCCTTAATATAAGATCCATTTCCAGAAGTTTCATGTGAATTCCACCCCTTTATGGTAAGAAAGTGTTGAGAGTGAGTGTCGGTGATGCTCCTCTTCCCTTTGAAGTTATAATTATATGTAACTCTTTGTGGTTAGTCCCTTCTAGGATATGACATGTCGTTTTGTAAAGTAGACTTCAGTTATCTAACCTTTCTTCCCCTTAATTCCTTTTCAATTACACAGACTTAGTTATGTTCACTTCTTGTTTTGAAAGATATAACAATGGTGCTTTTCTGTTTATGAAATGGGGAAAAAATAGGAAATCATTGATGCAGCATCTTATGTCCCACCACCTCCCTCAGAAGAGCAAAAGAAGAAAATTGCTAAGTTGTAAGAGCACTTCTCGTTTTTATATACATATTCTTTATTCTTCAGGTTAAAATACGGTTTATTATTTGGTTAACATTTTGCTAAGGGAATCTGTTAGCATTAGAATTACCAAGGGCTTGTAACCATCAAATGTGCACTTCTGTAGGGCTGCCATAGGAGAGCACAAACGTCTCAAAAGCAAGAAGGTGCAATCAGATAAGAAAGCGCAAAGAAGAAGTAAAAGTAGTTGGGACTAA

Protein sequence

>MS.gene72287.t1

MYGMASTTTRMVKGILLLHLSSTPPSSLLRITRDLSRPFFLSSLQLQRSHPATAIRCASSASDSGNNKVSSRLSQVHELLQEAEHRSISADYNAPIPKITLDHVTVNFARSGGPGGQNVNKVNTKVDMRFNVGKAHWLSERVREKIMQMEKNRMNKDGELVISSTKTRTQKGNIEDALAKLQEIIDAASYVPPPPSEEQKKKIAKLAAIGEHKRLKSKKVQSDKKAQRRSKSSWD