Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79960.t1 | XP_003622029.1 | 100 | 227 | 0 | 0 | 1 | 227 | 1 | 227 | 1.90E-112 | 415.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79960.t1 | G7L027 | 100.0 | 227 | 0 | 0 | 1 | 227 | 1 | 227 | 1.4e-112 | 415.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene79960 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene79960 | 0.82469 | 7.04E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene79960 | 0.829657 | 4.55E-55 | -1.69E-46 |
| MS.gene049271 | MS.gene79960 | 0.812351 | 4.43E-51 | -1.69E-46 |
| MS.gene049404 | MS.gene79960 | 0.825169 | 5.43E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene79960 | 0.819481 | 1.14E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene79960 | 0.838441 | 2.87E-57 | -1.69E-46 |
| MS.gene049711 | MS.gene79960 | 0.815262 | 1.01E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene79960 | 0.843036 | 1.79E-58 | -1.69E-46 |
| MS.gene049824 | MS.gene79960 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene049825 | MS.gene79960 | 0.829735 | 4.36E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene79960 | 0.838385 | 2.97E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene79960 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene050020 | MS.gene79960 | 0.818874 | 1.56E-52 | -1.69E-46 |
| MS.gene050026 | MS.gene79960 | 0.813524 | 2.45E-51 | -1.69E-46 |
| MS.gene050137 | MS.gene79960 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene79960 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene050201 | MS.gene79960 | 0.81292 | 3.33E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene79960 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene79960 | 0.813972 | 1.95E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene79960 | 0.800364 | 1.49E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene79960 | 0.820345 | 7.20E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene79960 | 0.815367 | 9.59E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene79960 | 0.83238 | 9.77E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene79960 | 0.832321 | 1.01E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene79960 | 0.826985 | 2.01E-54 | -1.69E-46 |
| MS.gene050750 | MS.gene79960 | 0.809243 | 2.08E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene79960 | 0.842708 | 2.19E-58 | -1.69E-46 |
| MS.gene050808 | MS.gene79960 | 0.822707 | 2.05E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene79960 | 0.801763 | 7.72E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene79960 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene79960 | 0.816787 | 4.62E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene79960 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene79960 | 0.853678 | 2.04E-61 | -1.69E-46 |
| MS.gene051265 | MS.gene79960 | 0.847597 | 1.05E-59 | -1.69E-46 |
| MS.gene051279 | MS.gene79960 | 0.800389 | 1.47E-48 | -1.69E-46 |
| MS.gene051328 | MS.gene79960 | 0.819003 | 1.46E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene79960 | 0.823056 | 1.70E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene79960 | 0.806245 | 9.03E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene79960 | 0.807493 | 4.92E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene79960 | 0.856082 | 4.09E-62 | -1.69E-46 |
| MS.gene051719 | MS.gene79960 | 0.877791 | 4.73E-69 | -1.69E-46 |
| MS.gene051720 | MS.gene79960 | 0.869762 | 2.43E-66 | -1.69E-46 |
| MS.gene051744 | MS.gene79960 | 0.826708 | 2.34E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene79960 | 0.817208 | 3.72E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene79960 | 0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene79960 | 0.827926 | 1.19E-54 | -1.69E-46 |
| MS.gene052133 | MS.gene79960 | 0.824282 | 8.78E-54 | -1.69E-46 |
| MS.gene052323 | MS.gene79960 | 0.819184 | 1.33E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene79960 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene79960 | 0.84543 | 4.08E-59 | -1.69E-46 |
| MS.gene052561 | MS.gene79960 | 0.8345 | 2.89E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene79960 | 0.834335 | 3.18E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene79960 | 0.832466 | 9.31E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene79960 | 0.836685 | 8.09E-57 | -1.69E-46 |
| MS.gene052613 | MS.gene79960 | 0.80787 | 4.09E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene79960 | 0.832983 | 6.92E-56 | -1.69E-46 |
| MS.gene052673 | MS.gene79960 | -0.811529 | 6.69E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene79960 | 0.842458 | 2.55E-58 | -1.69E-46 |
| MS.gene052863 | MS.gene79960 | 0.822428 | 2.38E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene79960 | 0.816747 | 4.72E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene79960 | 0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene79960 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene053054 | MS.gene79960 | -0.843158 | 1.66E-58 | -1.69E-46 |
| MS.gene053144 | MS.gene79960 | 0.825103 | 5.63E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene79960 | 0.841566 | 4.40E-58 | -1.69E-46 |
| MS.gene053226 | MS.gene79960 | 0.874659 | 5.68E-68 | -1.69E-46 |
| MS.gene053581 | MS.gene79960 | 0.80284 | 4.63E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene79960 | 0.815596 | 8.53E-52 | -1.69E-46 |
| MS.gene053883 | MS.gene79960 | 0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene79960 | 0.801597 | 8.35E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene79960 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene79960 | 0.810488 | 1.12E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene79960 | 0.811856 | 5.68E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene79960 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene79960 | -0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene79960 | 0.809492 | 1.84E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene79960 | 0.806843 | 6.76E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene79960 | 0.830776 | 2.43E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene79960 | 0.827752 | 1.31E-54 | -1.69E-46 |
| MS.gene05468 | MS.gene79960 | 0.813472 | 2.52E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene79960 | 0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene055356 | MS.gene79960 | 0.811048 | 8.51E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene79960 | 0.810747 | 9.89E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene79960 | 0.801761 | 7.73E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene79960 | 0.834901 | 2.29E-56 | -1.69E-46 |
| MS.gene055466 | MS.gene79960 | 0.858404 | 8.43E-63 | -1.69E-46 |
| MS.gene055468 | MS.gene79960 | 0.853116 | 2.95E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene79960 | 0.800918 | 1.15E-48 | -1.69E-46 |
| MS.gene055512 | MS.gene79960 | 0.840406 | 8.87E-58 | -1.69E-46 |
| MS.gene055580 | MS.gene79960 | -0.832806 | 7.66E-56 | -1.69E-46 |
| MS.gene055608 | MS.gene79960 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene055778 | MS.gene79960 | 0.848759 | 4.99E-60 | -1.69E-46 |
| MS.gene055818 | MS.gene79960 | 0.834459 | 2.96E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene79960 | 0.822846 | 1.90E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene79960 | -0.814856 | 1.24E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene79960 | 0.824103 | 9.68E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene79960 | 0.803135 | 4.03E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene79960 | 0.813455 | 2.54E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene79960 | 0.823078 | 1.68E-53 | -1.69E-46 |
| MS.gene056215 | MS.gene79960 | 0.828658 | 7.96E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene79960 | 0.813816 | 2.11E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene79960 | 0.837594 | 4.74E-57 | -1.69E-46 |
| MS.gene056373 | MS.gene79960 | 0.820526 | 6.55E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene79960 | 0.82229 | 2.56E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene79960 | 0.801487 | 8.80E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene79960 | 0.805533 | 1.28E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene79960 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene056642 | MS.gene79960 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene056859 | MS.gene79960 | 0.806571 | 7.71E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene79960 | 0.812926 | 3.32E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene79960 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene057287 | MS.gene79960 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene79960 | 0.827415 | 1.58E-54 | -1.69E-46 |
| MS.gene057414 | MS.gene79960 | 0.85283 | 3.57E-61 | -1.69E-46 |
| MS.gene057444 | MS.gene79960 | 0.862227 | 5.88E-64 | -1.69E-46 |
| MS.gene057693 | MS.gene79960 | 0.830361 | 3.07E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene79960 | 0.810051 | 1.40E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene79960 | 0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene058084 | MS.gene79960 | 0.815848 | 7.49E-52 | -1.69E-46 |
| MS.gene058339 | MS.gene79960 | 0.802686 | 4.99E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene79960 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene79960 | 0.856256 | 3.64E-62 | -1.69E-46 |
| MS.gene058636 | MS.gene79960 | 0.824458 | 7.98E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene79960 | 0.803389 | 3.57E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene79960 | 0.812106 | 5.01E-51 | -1.69E-46 |
| MS.gene059084 | MS.gene79960 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene79960 | 0.82009 | 8.24E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene79960 | 0.83243 | 9.50E-56 | -1.69E-46 |
| MS.gene059607 | MS.gene79960 | 0.804091 | 2.55E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene79960 | 0.844755 | 6.21E-59 | -1.69E-46 |
| MS.gene059725 | MS.gene79960 | 0.825242 | 5.21E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene79960 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene059937 | MS.gene79960 | 0.835104 | 2.04E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene79960 | -0.813228 | 2.85E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene79960 | 0.829029 | 6.47E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene79960 | 0.85231 | 5.02E-61 | -1.69E-46 |
| MS.gene060519 | MS.gene79960 | 0.809919 | 1.49E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene79960 | 0.817058 | 4.02E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene79960 | 0.812755 | 3.61E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene79960 | 0.852578 | 4.21E-61 | -1.69E-46 |
| MS.gene060634 | MS.gene79960 | -0.80607 | 9.83E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene79960 | 0.833846 | 4.22E-56 | -1.69E-46 |
| MS.gene060907 | MS.gene79960 | 0.800293 | 1.54E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene79960 | -0.815252 | 1.02E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79960.t1 | MTR_7g026320 | 100.000 | 227 | 0 | 0 | 1 | 227 | 1 | 227 | 1.58e-171 | 471 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79960.t1 | AT3G55420 | 65.534 | 206 | 60 | 3 | 26 | 227 | 18 | 216 | 4.24e-85 | 252 |
Find 35 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGAGCTTAAAGATTTCT+TGG | 0.245364 | 7.2:+72992016 | MS.gene79960:CDS |
| GTGTATGCTGTTAGAGAAAT+TGG | 0.256026 | 7.2:+72991942 | MS.gene79960:CDS |
| AAACCAACCTCAGAAGTTAA+AGG | 0.274880 | 7.2:+72991534 | MS.gene79960:CDS |
| AAATGGCTAGGTTCAAATTC+AGG | 0.286811 | 7.2:+72991898 | MS.gene79960:CDS |
| TAATTAATACTTCTTTGATT+TGG | 0.320121 | 7.2:-72992062 | None:intergenic |
| GTTAGAGAAATTGGAAGCTT+TGG | 0.336072 | 7.2:+72991951 | MS.gene79960:CDS |
| GAAGTTAAAGGTATAAGATT+TGG | 0.355820 | 7.2:+72991546 | MS.gene79960:CDS |
| AGTGTTCTGTTGATAGAATT+TGG | 0.356899 | 7.2:+72991814 | MS.gene79960:CDS |
| TTACTCTCAATCTCAAAATC+AGG | 0.362211 | 7.2:+72992082 | MS.gene79960:CDS |
| AACTTCTGAGGTTGGTTTGA+AGG | 0.367774 | 7.2:-72991529 | None:intergenic |
| TGTGAACAAGAAACTCATAA+AGG | 0.455332 | 7.2:+72991860 | MS.gene79960:CDS |
| GCTAGGATTGTGAAATTTGT+TGG | 0.455562 | 7.2:-72991705 | None:intergenic |
| GTGAACAAGAAACTCATAAA+GGG | 0.463123 | 7.2:+72991861 | MS.gene79960:CDS |
| AAACTCATAAAGGGTCTTTG+TGG | 0.468332 | 7.2:+72991870 | MS.gene79960:CDS |
| ATACCTTTAACTTCTGAGGT+TGG | 0.471100 | 7.2:-72991537 | None:intergenic |
| ATCTCAAAATCAGGTTGCTA+TGG | 0.477887 | 7.2:+72992091 | MS.gene79960:CDS |
| ATTTCTTTGATCCAAGCCCT+AGG | 0.480022 | 7.2:-72991752 | None:intergenic |
| GGCAAGAATGCTGTTGTTGA+AGG | 0.519600 | 7.2:-72991684 | None:intergenic |
| TCTTATACCTTTAACTTCTG+AGG | 0.522452 | 7.2:-72991541 | None:intergenic |
| TGTGTTTGTGTTTGAAACTG+AGG | 0.526748 | 7.2:+72991785 | MS.gene79960:CDS |
| GTTAAAGGTATAAGATTTGG+TGG | 0.527957 | 7.2:+72991549 | MS.gene79960:CDS |
| TTGTTTGAGAATTAGGATGT+TGG | 0.533338 | 7.2:-72991485 | None:intergenic |
| AGAACTTTGAGAAGTTCAAG+AGG | 0.536254 | 7.2:-72991612 | None:intergenic |
| CACACACTAACCCTAGGGCT+TGG | 0.546093 | 7.2:+72991741 | MS.gene79960:CDS |
| TGTGCCATGCTTGATGTGCT+AGG | 0.551608 | 7.2:-72991722 | None:intergenic |
| GCATGGCACACACTAACCCT+AGG | 0.552987 | 7.2:+72991735 | MS.gene79960:CDS |
| GCTAGGTTCAAATTCAGGAA+AGG | 0.582435 | 7.2:+72991903 | MS.gene79960:CDS |
| TTTCTTTGATCCAAGCCCTA+GGG | 0.582873 | 7.2:-72991751 | None:intergenic |
| TGGCCACATGAAATAGCACT+TGG | 0.594109 | 7.2:+72991834 | MS.gene79960:CDS |
| AATGCTGTTGTTGAAGGGAA+AGG | 0.602603 | 7.2:-72991678 | None:intergenic |
| TGGTTTGAAGGAGAAATCTG+AGG | 0.603282 | 7.2:-72991517 | None:intergenic |
| CAATCCTAGCACATCAAGCA+TGG | 0.615793 | 7.2:+72991718 | MS.gene79960:CDS |
| GCAAGAATGCTGTTGTTGAA+GGG | 0.631568 | 7.2:-72991683 | None:intergenic |
| CATGGCACACACTAACCCTA+GGG | 0.642128 | 7.2:+72991736 | MS.gene79960:CDS |
| TCACCAAGTGCTATTTCATG+TGG | 0.645451 | 7.2:-72991837 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAATACTTCTTTGATT+TGG | - | chr7.2:72992065-72992084 | None:intergenic | 15.0% |
| !!! | GAAATGATTTTACTATGAAT+TGG | - | chr7.2:72991575-72991594 | None:intergenic | 20.0% |
| !! | GAAGTTAAAGGTATAAGATT+TGG | + | chr7.2:72991546-72991565 | MS.gene79960:CDS | 25.0% |
| !!! | TGTTTTGTTGTTTGAGAATT+AGG | - | chr7.2:72991495-72991514 | None:intergenic | 25.0% |
| GTGAACAAGAAACTCATAAA+GGG | + | chr7.2:72991861-72991880 | MS.gene79960:CDS | 30.0% | |
| TGTGAACAAGAAACTCATAA+AGG | + | chr7.2:72991860-72991879 | MS.gene79960:CDS | 30.0% | |
| TGTTGAGCTTAAAGATTTCT+TGG | + | chr7.2:72992016-72992035 | MS.gene79960:CDS | 30.0% | |
| TTACTCTCAATCTCAAAATC+AGG | + | chr7.2:72992082-72992101 | MS.gene79960:CDS | 30.0% | |
| TTGTTTGAGAATTAGGATGT+TGG | - | chr7.2:72991488-72991507 | None:intergenic | 30.0% | |
| ! | AGTGTTCTGTTGATAGAATT+TGG | + | chr7.2:72991814-72991833 | MS.gene79960:CDS | 30.0% |
| ! | GTTAAAGGTATAAGATTTGG+TGG | + | chr7.2:72991549-72991568 | MS.gene79960:CDS | 30.0% |
| ! | TCTTATACCTTTAACTTCTG+AGG | - | chr7.2:72991544-72991563 | None:intergenic | 30.0% |
| !! | AGAGGTTTTGCTTTTCTTAT+TGG | - | chr7.2:72991597-72991616 | None:intergenic | 30.0% |
| !!! | GGAAGTTTTTTGTTGTCTTT+TGG | - | chr7.2:72991660-72991679 | None:intergenic | 30.0% |
| !!! | TTGTCTTTTGGTTTTGTTGT+TGG | - | chr7.2:72991648-72991667 | None:intergenic | 30.0% |
| AAACCAACCTCAGAAGTTAA+AGG | + | chr7.2:72991534-72991553 | MS.gene79960:CDS | 35.0% | |
| AAACTCATAAAGGGTCTTTG+TGG | + | chr7.2:72991870-72991889 | MS.gene79960:CDS | 35.0% | |
| AAATGGCTAGGTTCAAATTC+AGG | + | chr7.2:72991898-72991917 | MS.gene79960:CDS | 35.0% | |
| GCTAGGATTGTGAAATTTGT+TGG | - | chr7.2:72991708-72991727 | None:intergenic | 35.0% | |
| GTGTATGCTGTTAGAGAAAT+TGG | + | chr7.2:72991942-72991961 | MS.gene79960:CDS | 35.0% | |
| GTTAGAGAAATTGGAAGCTT+TGG | + | chr7.2:72991951-72991970 | MS.gene79960:CDS | 35.0% | |
| ! | AGAACTTTGAGAAGTTCAAG+AGG | - | chr7.2:72991615-72991634 | None:intergenic | 35.0% |
| ! | ATCTCAAAATCAGGTTGCTA+TGG | + | chr7.2:72992091-72992110 | MS.gene79960:CDS | 35.0% |
| ! | TGTGTTTGTGTTTGAAACTG+AGG | + | chr7.2:72991785-72991804 | MS.gene79960:CDS | 35.0% |
| !! | ATACCTTTAACTTCTGAGGT+TGG | - | chr7.2:72991540-72991559 | None:intergenic | 35.0% |
| !!! | CTTTTGGTTTTGTTGTTGGT+GGG | - | chr7.2:72991644-72991663 | None:intergenic | 35.0% |
| !!! | TCTTTTGGTTTTGTTGTTGG+TGG | - | chr7.2:72991645-72991664 | None:intergenic | 35.0% |
| !!! | TTTGTGGTTTTGAAATGGCT+AGG | + | chr7.2:72991886-72991905 | MS.gene79960:CDS | 35.0% |
| AATGCTGTTGTTGAAGGGAA+AGG | - | chr7.2:72991681-72991700 | None:intergenic | 40.0% | |
| ATTTCTTTGATCCAAGCCCT+AGG | - | chr7.2:72991755-72991774 | None:intergenic | 40.0% | |
| GCAAGAATGCTGTTGTTGAA+GGG | - | chr7.2:72991686-72991705 | None:intergenic | 40.0% | |
| GCTAGGTTCAAATTCAGGAA+AGG | + | chr7.2:72991903-72991922 | MS.gene79960:CDS | 40.0% | |
| TGGTTTGAAGGAGAAATCTG+AGG | - | chr7.2:72991520-72991539 | None:intergenic | 40.0% | |
| TTTCTTTGATCCAAGCCCTA+GGG | - | chr7.2:72991754-72991773 | None:intergenic | 40.0% | |
| !! | AACTTCTGAGGTTGGTTTGA+AGG | - | chr7.2:72991532-72991551 | None:intergenic | 40.0% |
| !! | TCACCAAGTGCTATTTCATG+TGG | - | chr7.2:72991840-72991859 | None:intergenic | 40.0% |
| !!! | GGGTCTTTGTGGTTTTGAAA+TGG | + | chr7.2:72991881-72991900 | MS.gene79960:CDS | 40.0% |
| CAATCCTAGCACATCAAGCA+TGG | + | chr7.2:72991718-72991737 | MS.gene79960:CDS | 45.0% | |
| GGCAAGAATGCTGTTGTTGA+AGG | - | chr7.2:72991687-72991706 | None:intergenic | 45.0% | |
| TGGCCACATGAAATAGCACT+TGG | + | chr7.2:72991834-72991853 | MS.gene79960:CDS | 45.0% | |
| CATGGCACACACTAACCCTA+GGG | + | chr7.2:72991736-72991755 | MS.gene79960:CDS | 50.0% | |
| TGTGCCATGCTTGATGTGCT+AGG | - | chr7.2:72991725-72991744 | None:intergenic | 50.0% | |
| CACACACTAACCCTAGGGCT+TGG | + | chr7.2:72991741-72991760 | MS.gene79960:CDS | 55.0% | |
| GCATGGCACACACTAACCCT+AGG | + | chr7.2:72991735-72991754 | MS.gene79960:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 72991438 | 72992121 | 72991438 | ID=MS.gene79960 |
| chr7.2 | mRNA | 72991438 | 72992121 | 72991438 | ID=MS.gene79960.t1;Parent=MS.gene79960 |
| chr7.2 | exon | 72991438 | 72992121 | 72991438 | ID=MS.gene79960.t1.exon1;Parent=MS.gene79960.t1 |
| chr7.2 | CDS | 72991438 | 72992121 | 72991438 | ID=cds.MS.gene79960.t1;Parent=MS.gene79960.t1 |
| Gene Sequence |
| Protein sequence |
