Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84086.t1 | XP_013467427.1 | 98.1 | 211 | 4 | 0 | 1 | 211 | 188 | 398 | 5.90E-116 | 426.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84086.t1 | Q9M2A1 | 66.8 | 211 | 69 | 1 | 1 | 211 | 206 | 415 | 1.0e-79 | 297.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84086.t1 | A0A072VHH2 | 98.1 | 211 | 4 | 0 | 1 | 211 | 188 | 398 | 4.3e-116 | 426.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene84086 | 0.833358 | 5.58E-56 | -1.69E-46 |
| MS.gene049151 | MS.gene84086 | 0.856229 | 3.71E-62 | -1.69E-46 |
| MS.gene049153 | MS.gene84086 | 0.820002 | 8.63E-53 | -1.69E-46 |
| MS.gene049230 | MS.gene84086 | 0.809959 | 1.46E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene84086 | 0.835172 | 1.96E-56 | -1.69E-46 |
| MS.gene049346 | MS.gene84086 | 0.807626 | 4.61E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene84086 | 0.852847 | 3.53E-61 | -1.69E-46 |
| MS.gene049382 | MS.gene84086 | 0.810494 | 1.12E-50 | -1.69E-46 |
| MS.gene049629 | MS.gene84086 | 0.822446 | 2.36E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene84086 | 0.867811 | 1.04E-65 | -1.69E-46 |
| MS.gene04984 | MS.gene84086 | 0.800009 | 1.76E-48 | -1.69E-46 |
| MS.gene049910 | MS.gene84086 | 0.839432 | 1.59E-57 | -1.69E-46 |
| MS.gene049915 | MS.gene84086 | 0.86687 | 2.08E-65 | -1.69E-46 |
| MS.gene050226 | MS.gene84086 | 0.881075 | 3.24E-70 | -1.69E-46 |
| MS.gene050227 | MS.gene84086 | 0.880298 | 6.16E-70 | -1.69E-46 |
| MS.gene050228 | MS.gene84086 | 0.880395 | 5.69E-70 | -1.69E-46 |
| MS.gene050303 | MS.gene84086 | 0.805444 | 1.33E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene84086 | -0.838569 | 2.66E-57 | -1.69E-46 |
| MS.gene050438 | MS.gene84086 | 0.817717 | 2.85E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene84086 | 0.827867 | 1.23E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene84086 | 0.826885 | 2.12E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene84086 | -0.857784 | 1.29E-62 | -1.69E-46 |
| MS.gene050642 | MS.gene84086 | 0.83823 | 3.25E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene84086 | 0.831236 | 1.87E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene84086 | 0.832349 | 9.95E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene84086 | 0.832098 | 1.15E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene84086 | 0.826206 | 3.08E-54 | -1.69E-46 |
| MS.gene050763 | MS.gene84086 | 0.826832 | 2.18E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene84086 | 0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene84086 | 0.802994 | 4.31E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene84086 | 0.825254 | 5.18E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene84086 | 0.817123 | 3.88E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene84086 | -0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene051349 | MS.gene84086 | 0.820027 | 8.52E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene84086 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene84086 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene84086 | 0.81547 | 9.10E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene84086 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene051757 | MS.gene84086 | 0.809682 | 1.68E-50 | -1.69E-46 |
| MS.gene051789 | MS.gene84086 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene84086 | 0.830807 | 2.38E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene84086 | 0.847956 | 8.33E-60 | -1.69E-46 |
| MS.gene052077 | MS.gene84086 | 0.816377 | 5.71E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene84086 | 0.84624 | 2.46E-59 | -1.69E-46 |
| MS.gene052286 | MS.gene84086 | 0.803751 | 3.00E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene84086 | 0.855474 | 6.16E-62 | -1.69E-46 |
| MS.gene052309 | MS.gene84086 | -0.81981 | 9.55E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene84086 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene052376 | MS.gene84086 | 0.867814 | 1.04E-65 | -1.69E-46 |
| MS.gene052426 | MS.gene84086 | 0.807865 | 4.10E-50 | -1.69E-46 |
| MS.gene052600 | MS.gene84086 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene84086 | 0.844837 | 5.90E-59 | -1.69E-46 |
| MS.gene052858 | MS.gene84086 | 0.837104 | 6.33E-57 | -1.69E-46 |
| MS.gene052860 | MS.gene84086 | 0.835036 | 2.12E-56 | -1.69E-46 |
| MS.gene053074 | MS.gene84086 | 0.823091 | 1.67E-53 | -1.69E-46 |
| MS.gene053184 | MS.gene84086 | 0.833709 | 4.56E-56 | -1.69E-46 |
| MS.gene053216 | MS.gene84086 | 0.811691 | 6.17E-51 | -1.69E-46 |
| MS.gene053630 | MS.gene84086 | 0.83269 | 8.19E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene84086 | 0.871031 | 9.32E-67 | -1.69E-46 |
| MS.gene054184 | MS.gene84086 | 0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene84086 | 0.829336 | 5.45E-55 | -1.69E-46 |
| MS.gene054379 | MS.gene84086 | 0.836649 | 8.27E-57 | -1.69E-46 |
| MS.gene054472 | MS.gene84086 | 0.807234 | 5.58E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene84086 | 0.809457 | 1.87E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene84086 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene054667 | MS.gene84086 | 0.837229 | 5.88E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene84086 | 0.868433 | 6.55E-66 | -1.69E-46 |
| MS.gene054942 | MS.gene84086 | 0.847077 | 1.45E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene84086 | 0.822076 | 2.87E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene84086 | 0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene055133 | MS.gene84086 | 0.805921 | 1.06E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene84086 | 0.804481 | 2.12E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene84086 | 0.800455 | 1.43E-48 | -1.69E-46 |
| MS.gene056069 | MS.gene84086 | -0.822251 | 2.62E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene84086 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene056552 | MS.gene84086 | 0.832321 | 1.01E-55 | -1.69E-46 |
| MS.gene056760 | MS.gene84086 | 0.836757 | 7.76E-57 | -1.69E-46 |
| MS.gene056875 | MS.gene84086 | 0.862154 | 6.19E-64 | -1.69E-46 |
| MS.gene056979 | MS.gene84086 | 0.838224 | 3.26E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene84086 | 0.822262 | 2.60E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene84086 | 0.833926 | 4.03E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene84086 | 0.816082 | 6.64E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene84086 | 0.836465 | 9.21E-57 | -1.69E-46 |
| MS.gene057754 | MS.gene84086 | 0.864449 | 1.21E-64 | -1.69E-46 |
| MS.gene057869 | MS.gene84086 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene057967 | MS.gene84086 | 0.84734 | 1.23E-59 | -1.69E-46 |
| MS.gene057980 | MS.gene84086 | 0.8103 | 1.23E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene84086 | 0.819768 | 9.76E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene84086 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene84086 | 0.809936 | 1.48E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene84086 | 0.811054 | 8.48E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene84086 | 0.831697 | 1.44E-55 | -1.69E-46 |
| MS.gene058182 | MS.gene84086 | 0.844697 | 6.44E-59 | -1.69E-46 |
| MS.gene058399 | MS.gene84086 | 0.82271 | 2.05E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene84086 | 0.835606 | 1.52E-56 | -1.69E-46 |
| MS.gene058833 | MS.gene84086 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene84086 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene84086 | 0.817068 | 3.99E-52 | -1.69E-46 |
| MS.gene058982 | MS.gene84086 | 0.815533 | 8.81E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene84086 | 0.802015 | 6.85E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene84086 | 0.846299 | 2.37E-59 | -1.69E-46 |
| MS.gene059128 | MS.gene84086 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene84086 | 0.83095 | 2.20E-55 | -1.69E-46 |
| MS.gene059569 | MS.gene84086 | 0.811997 | 5.29E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene84086 | 0.818902 | 1.54E-52 | -1.69E-46 |
| MS.gene059899 | MS.gene84086 | 0.811349 | 7.32E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene84086 | 0.831689 | 1.45E-55 | -1.69E-46 |
| MS.gene060297 | MS.gene84086 | 0.820631 | 6.19E-53 | -1.69E-46 |
| MS.gene060404 | MS.gene84086 | 0.814085 | 1.84E-51 | -1.69E-46 |
| MS.gene060476 | MS.gene84086 | 0.851555 | 8.23E-61 | -1.69E-46 |
| MS.gene060480 | MS.gene84086 | 0.82696 | 2.04E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene84086 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene060619 | MS.gene84086 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene84086 | 0.829431 | 5.17E-55 | -1.69E-46 |
| MS.gene060685 | MS.gene84086 | 0.823555 | 1.30E-53 | -1.69E-46 |
| MS.gene060942 | MS.gene84086 | 0.808386 | 3.18E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene84086 | 0.828505 | 8.66E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene84086 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene84086 | 0.819283 | 1.26E-52 | -1.69E-46 |
| MS.gene061113 | MS.gene84086 | 0.811701 | 6.14E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84086.t1 | MTR_1g051205 | 98.104 | 211 | 4 | 0 | 1 | 211 | 188 | 398 | 4.93e-157 | 440 |
| MS.gene84086.t1 | MTR_0004s0610 | 96.682 | 211 | 7 | 0 | 1 | 211 | 189 | 399 | 5.20e-154 | 432 |
| MS.gene84086.t1 | MTR_5g068170 | 81.429 | 210 | 22 | 1 | 1 | 210 | 118 | 310 | 1.04e-113 | 327 |
| MS.gene84086.t1 | MTR_6g034745 | 78.723 | 47 | 10 | 0 | 108 | 154 | 271 | 317 | 4.46e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84086.t1 | AT3G42630 | 66.825 | 211 | 69 | 1 | 1 | 211 | 206 | 415 | 8.49e-104 | 305 |
| MS.gene84086.t1 | AT4G14190 | 29.384 | 211 | 135 | 5 | 1 | 201 | 291 | 497 | 3.19e-13 | 68.2 |
Find 47 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTACGACGTTTAATATT+AGG | 0.162570 | 1.4:+37655663 | MS.gene84086:CDS |
| ATAGGAGGAACCAGATATTT+TGG | 0.193003 | 1.4:+37656011 | MS.gene84086:CDS |
| TAGAAAGCTTGGAAGGAATT+TGG | 0.211995 | 1.4:+37655808 | MS.gene84086:CDS |
| TTTCGAGGATGGCGCTGTTT+TGG | 0.262354 | 1.4:+37655696 | MS.gene84086:CDS |
| GAAGAGAAAATTCTATGAAT+TGG | 0.262799 | 1.4:+37655493 | MS.gene84086:CDS |
| GTTAATAGTTCCAAAATATC+TGG | 0.282061 | 1.4:-37656021 | None:intergenic |
| AACAACAGAAATGGAGTTAT+AGG | 0.284479 | 1.4:+37655957 | MS.gene84086:CDS |
| GCTTGCAGAGAGAGTTTGTT+AGG | 0.289369 | 1.4:+37655615 | MS.gene84086:CDS |
| TGTTACGACGTTTAATATTA+GGG | 0.297675 | 1.4:+37655664 | MS.gene84086:CDS |
| AATGAAATGGAAAATGCTTA+TGG | 0.317533 | 1.4:+37655401 | None:intergenic |
| GTGATTAGGGCTATGGCTTA+TGG | 0.328397 | 1.4:+37655461 | MS.gene84086:CDS |
| GATGGAGGAAAATGTGATTA+GGG | 0.335950 | 1.4:+37655448 | MS.gene84086:CDS |
| TGAAAAGGTTGTTCCTGATT+TGG | 0.336453 | 1.4:+37655751 | MS.gene84086:CDS |
| TGATGGAGGAAAATGTGATT+AGG | 0.338371 | 1.4:+37655447 | MS.gene84086:CDS |
| TACAGATCCGTTTGTGTTTG+AGG | 0.346471 | 1.4:+37655877 | MS.gene84086:CDS |
| ACAACAGAAATGGAGTTATA+GGG | 0.350987 | 1.4:+37655958 | MS.gene84086:CDS |
| TTTGTTAGGATGGTTGAATC+AGG | 0.352533 | 1.4:+37655629 | MS.gene84086:CDS |
| ATGGAAGGTTTAAGAGATCT+AGG | 0.371453 | 1.4:+37655420 | MS.gene84086:CDS |
| AATATCTTAAGAAACATTAT+AGG | 0.375645 | 1.4:+37655993 | MS.gene84086:CDS |
| GGTTTAGGTAGGAGAAATGT+TGG | 0.378690 | 1.4:+37655536 | MS.gene84086:CDS |
| AAGAGAAAATTCTATGAATT+GGG | 0.388525 | 1.4:+37655494 | MS.gene84086:CDS |
| TTTGTTAGAGATGTTGGTTT+AGG | 0.396561 | 1.4:+37655521 | MS.gene84086:CDS |
| GTTCCTGATTTGGTTACTTA+CGG | 0.403448 | 1.4:+37655761 | MS.gene84086:CDS |
| GGTGAGTTTGTTAGAGATGT+TGG | 0.404844 | 1.4:+37655515 | MS.gene84086:CDS |
| ACAAGACACAACAACAGAAA+TGG | 0.420204 | 1.4:+37655948 | MS.gene84086:CDS |
| CAACCGTAAGTAACCAAATC+AGG | 0.433446 | 1.4:-37655764 | None:intergenic |
| ATCTTAGTATTGAACATATG+AGG | 0.444340 | 1.4:+37655726 | MS.gene84086:CDS |
| AGGTGACTTTCATTTGAGTT+CGG | 0.445273 | 1.4:+37655910 | MS.gene84086:CDS |
| GACGTTTAATATTAGGGCTA+TGG | 0.449092 | 1.4:+37655670 | MS.gene84086:CDS |
| TTGTGTTGTGGAGGCTTACT+TGG | 0.462364 | 1.4:+37655784 | MS.gene84086:CDS |
| GCTTACTTGGATAGAAAGCT+TGG | 0.481941 | 1.4:+37655797 | MS.gene84086:CDS |
| GGTTGAATCAGGGTTTCGTC+CGG | 0.489825 | 1.4:+37655640 | MS.gene84086:CDS |
| GCAGAGAGAGTTTGTTAGGA+TGG | 0.492223 | 1.4:+37655619 | MS.gene84086:CDS |
| GTTTAGGTAGGAGAAATGTT+GGG | 0.493418 | 1.4:+37655537 | MS.gene84086:CDS |
| ATATTAAACGTCGTAACATC+CGG | 0.502209 | 1.4:-37655659 | None:intergenic |
| TTAGAGATGTTGGTTTAGGT+AGG | 0.503038 | 1.4:+37655525 | MS.gene84086:CDS |
| GGAAAATGTGATTAGGGCTA+TGG | 0.512451 | 1.4:+37655454 | MS.gene84086:CDS |
| TTGTTAGGATGGTTGAATCA+GGG | 0.518440 | 1.4:+37655630 | MS.gene84086:CDS |
| TGAACATATGAGGAGTGAAA+AGG | 0.526259 | 1.4:+37655736 | MS.gene84086:CDS |
| CCTAAAACCTCAAACACAAA+CGG | 0.528045 | 1.4:-37655884 | None:intergenic |
| AAATGGAAAATGCTTATGGA+AGG | 0.541034 | 1.4:+37655405 | None:intergenic |
| ACTTGGATAGAAAGCTTGGA+AGG | 0.554688 | 1.4:+37655801 | MS.gene84086:CDS |
| AACGGATCTGTAAACAATCT+CGG | 0.566471 | 1.4:-37655866 | None:intergenic |
| TGACTTTCATTTGAGTTCGG+AGG | 0.582232 | 1.4:+37655913 | MS.gene84086:CDS |
| GGTTACTTACGGTTGTGTTG+TGG | 0.592231 | 1.4:+37655772 | MS.gene84086:CDS |
| TACTTACGGTTGTGTTGTGG+AGG | 0.598880 | 1.4:+37655775 | MS.gene84086:CDS |
| ATCTTAAGAAACATTATAGG+AGG | 0.601959 | 1.4:+37655996 | MS.gene84086:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTTAAGAAACATTAT+AGG | + | chr1.4:37655993-37656012 | MS.gene84086:CDS | 15.0% |
| !! | AAGAGAAAATTCTATGAATT+GGG | + | chr1.4:37655494-37655513 | MS.gene84086:CDS | 20.0% |
| ! | ATCTTAAGAAACATTATAGG+AGG | + | chr1.4:37655996-37656015 | MS.gene84086:CDS | 25.0% |
| ! | ATGTTACGACGTTTAATATT+AGG | + | chr1.4:37655663-37655682 | MS.gene84086:CDS | 25.0% |
| ! | GAAGAGAAAATTCTATGAAT+TGG | + | chr1.4:37655493-37655512 | MS.gene84086:CDS | 25.0% |
| ! | TGTTACGACGTTTAATATTA+GGG | + | chr1.4:37655664-37655683 | MS.gene84086:CDS | 25.0% |
| !! | ATCTTAGTATTGAACATATG+AGG | + | chr1.4:37655726-37655745 | MS.gene84086:CDS | 25.0% |
| !!! | GGAGTTTGTTTTGAATAAAA+TGG | + | chr1.4:37655829-37655848 | MS.gene84086:CDS | 25.0% |
| !!! | TGTTTTGAATAAAATGGATG+TGG | + | chr1.4:37655835-37655854 | MS.gene84086:CDS | 25.0% |
| AACAACAGAAATGGAGTTAT+AGG | + | chr1.4:37655957-37655976 | MS.gene84086:CDS | 30.0% | |
| ACAACAGAAATGGAGTTATA+GGG | + | chr1.4:37655958-37655977 | MS.gene84086:CDS | 30.0% | |
| ATATTAAACGTCGTAACATC+CGG | - | chr1.4:37655662-37655681 | None:intergenic | 30.0% | |
| ! | TAAGAGATCTAGGTTTTTGA+TGG | + | chr1.4:37655430-37655449 | MS.gene84086:CDS | 30.0% |
| !! | TTTGTTAGAGATGTTGGTTT+AGG | + | chr1.4:37655521-37655540 | MS.gene84086:CDS | 30.0% |
| AACGGATCTGTAAACAATCT+CGG | - | chr1.4:37655869-37655888 | None:intergenic | 35.0% | |
| ACAAGACACAACAACAGAAA+TGG | + | chr1.4:37655948-37655967 | MS.gene84086:CDS | 35.0% | |
| ATGGAAGGTTTAAGAGATCT+AGG | + | chr1.4:37655420-37655439 | MS.gene84086:CDS | 35.0% | |
| CCTAAAACCTCAAACACAAA+CGG | - | chr1.4:37655887-37655906 | None:intergenic | 35.0% | |
| GACGTTTAATATTAGGGCTA+TGG | + | chr1.4:37655670-37655689 | MS.gene84086:CDS | 35.0% | |
| GATGGAGGAAAATGTGATTA+GGG | + | chr1.4:37655448-37655467 | MS.gene84086:CDS | 35.0% | |
| GTTTAGGTAGGAGAAATGTT+GGG | + | chr1.4:37655537-37655556 | MS.gene84086:CDS | 35.0% | |
| TAGAAAGCTTGGAAGGAATT+TGG | + | chr1.4:37655808-37655827 | MS.gene84086:CDS | 35.0% | |
| TGAAAAGGTTGTTCCTGATT+TGG | + | chr1.4:37655751-37655770 | MS.gene84086:CDS | 35.0% | |
| TGAACATATGAGGAGTGAAA+AGG | + | chr1.4:37655736-37655755 | MS.gene84086:CDS | 35.0% | |
| TGATGGAGGAAAATGTGATT+AGG | + | chr1.4:37655447-37655466 | MS.gene84086:CDS | 35.0% | |
| TTGTTAGGATGGTTGAATCA+GGG | + | chr1.4:37655630-37655649 | MS.gene84086:CDS | 35.0% | |
| TTTGTTAGGATGGTTGAATC+AGG | + | chr1.4:37655629-37655648 | MS.gene84086:CDS | 35.0% | |
| ! | AGGTGACTTTCATTTGAGTT+CGG | + | chr1.4:37655910-37655929 | MS.gene84086:CDS | 35.0% |
| ! | ATAGGAGGAACCAGATATTT+TGG | + | chr1.4:37656011-37656030 | MS.gene84086:CDS | 35.0% |
| ! | GAAATGTTGGGAATCTTTTG+TGG | + | chr1.4:37655549-37655568 | MS.gene84086:CDS | 35.0% |
| !! | GTTCCTGATTTGGTTACTTA+CGG | + | chr1.4:37655761-37655780 | MS.gene84086:CDS | 35.0% |
| !! | TTAGAGATGTTGGTTTAGGT+AGG | + | chr1.4:37655525-37655544 | MS.gene84086:CDS | 35.0% |
| !!! | GTGTTTGAGGTTTTAGGTAA+AGG | + | chr1.4:37655890-37655909 | MS.gene84086:CDS | 35.0% |
| ACTTGGATAGAAAGCTTGGA+AGG | + | chr1.4:37655801-37655820 | MS.gene84086:CDS | 40.0% | |
| CAACCGTAAGTAACCAAATC+AGG | - | chr1.4:37655767-37655786 | None:intergenic | 40.0% | |
| GCTTACTTGGATAGAAAGCT+TGG | + | chr1.4:37655797-37655816 | MS.gene84086:CDS | 40.0% | |
| GGAAAATGTGATTAGGGCTA+TGG | + | chr1.4:37655454-37655473 | MS.gene84086:CDS | 40.0% | |
| GGTTTAGGTAGGAGAAATGT+TGG | + | chr1.4:37655536-37655555 | MS.gene84086:CDS | 40.0% | |
| TACAGATCCGTTTGTGTTTG+AGG | + | chr1.4:37655877-37655896 | MS.gene84086:CDS | 40.0% | |
| ! | GAGATCTAGGTTTTTGATGG+AGG | + | chr1.4:37655433-37655452 | MS.gene84086:CDS | 40.0% |
| ! | TGACTTTCATTTGAGTTCGG+AGG | + | chr1.4:37655913-37655932 | MS.gene84086:CDS | 40.0% |
| !! | CCGTTTGTGTTTGAGGTTTT+AGG | + | chr1.4:37655884-37655903 | MS.gene84086:CDS | 40.0% |
| !! | GGTGAGTTTGTTAGAGATGT+TGG | + | chr1.4:37655515-37655534 | MS.gene84086:CDS | 40.0% |
| GGTTACTTACGGTTGTGTTG+TGG | + | chr1.4:37655772-37655791 | MS.gene84086:CDS | 45.0% | |
| GTGATTAGGGCTATGGCTTA+TGG | + | chr1.4:37655461-37655480 | MS.gene84086:CDS | 45.0% | |
| TACTTACGGTTGTGTTGTGG+AGG | + | chr1.4:37655775-37655794 | MS.gene84086:CDS | 45.0% | |
| TTGTGTTGTGGAGGCTTACT+TGG | + | chr1.4:37655784-37655803 | MS.gene84086:CDS | 45.0% | |
| ! | GCTTGCAGAGAGAGTTTGTT+AGG | + | chr1.4:37655615-37655634 | MS.gene84086:CDS | 45.0% |
| !! | GCAGAGAGAGTTTGTTAGGA+TGG | + | chr1.4:37655619-37655638 | MS.gene84086:CDS | 45.0% |
| !!! | TTTGAGTTCGGAGGCGTTTT+TGG | + | chr1.4:37655922-37655941 | MS.gene84086:CDS | 45.0% |
| GGTTGAATCAGGGTTTCGTC+CGG | + | chr1.4:37655640-37655659 | MS.gene84086:CDS | 50.0% | |
| ! | TTAGGGCTATGGCGTTTTCG+AGG | + | chr1.4:37655681-37655700 | MS.gene84086:CDS | 50.0% |
| ! | TTTCGAGGATGGCGCTGTTT+TGG | + | chr1.4:37655696-37655715 | MS.gene84086:CDS | 50.0% |
| !! | TTCGAGGATGGCGCTGTTTT+GGG | + | chr1.4:37655697-37655716 | MS.gene84086:CDS | 50.0% |
| !! | GGCTATGGCGTTTTCGAGGA+TGG | + | chr1.4:37655685-37655704 | MS.gene84086:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 37655407 | 37656042 | 37655407 | ID=MS.gene84086 |
| chr1.4 | mRNA | 37655407 | 37656042 | 37655407 | ID=MS.gene84086.t1;Parent=MS.gene84086 |
| chr1.4 | exon | 37655407 | 37656042 | 37655407 | ID=MS.gene84086.t1.exon1;Parent=MS.gene84086.t1 |
| chr1.4 | CDS | 37655407 | 37656042 | 37655407 | ID=cds.MS.gene84086.t1;Parent=MS.gene84086.t1 |
| Gene Sequence |
| Protein sequence |
