Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95377.t1 | AFK38479.1 | 91 | 78 | 7 | 0 | 177 | 254 | 1 | 78 | 2.70E-29 | 139.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95377.t1 | F4JZT3 | 54.0 | 63 | 29 | 0 | 58 | 120 | 17 | 79 | 2.3e-13 | 77.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95377.t1 | A0A396IWQ7 | 91.0 | 78 | 7 | 0 | 177 | 254 | 1 | 78 | 2.0e-29 | 139.4 |
| MS.gene95377.t1 | A0A396IWQ7 | 61.6 | 86 | 29 | 1 | 220 | 305 | 312 | 393 | 8.3e-20 | 107.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene95377.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene95377 | 0.870193 | 1.75E-66 | -1.69E-46 |
| MS.gene049151 | MS.gene95377 | 0.829007 | 6.55E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene95377 | 0.85924 | 4.74E-63 | -1.69E-46 |
| MS.gene049233 | MS.gene95377 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene95377 | 0.851928 | 6.45E-61 | -1.69E-46 |
| MS.gene049297 | MS.gene95377 | 0.805923 | 1.06E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene95377 | 0.84852 | 5.82E-60 | -1.69E-46 |
| MS.gene049435 | MS.gene95377 | 0.839169 | 1.86E-57 | -1.69E-46 |
| MS.gene049910 | MS.gene95377 | 0.802174 | 6.36E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene95377 | 0.825618 | 4.25E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene95377 | 0.848972 | 4.36E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene95377 | 0.844485 | 7.34E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene95377 | 0.842329 | 2.76E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene95377 | -0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene95377 | 0.858272 | 9.23E-63 | -1.69E-46 |
| MS.gene050558 | MS.gene95377 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene95377 | -0.820321 | 7.30E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene95377 | 0.820089 | 8.24E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene95377 | 0.86502 | 7.99E-65 | -1.69E-46 |
| MS.gene050719 | MS.gene95377 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene95377 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene95377 | 0.860866 | 1.53E-63 | -1.69E-46 |
| MS.gene050787 | MS.gene95377 | 0.806777 | 6.98E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene95377 | 0.846712 | 1.83E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene95377 | 0.846646 | 1.91E-59 | -1.69E-46 |
| MS.gene050987 | MS.gene95377 | 0.8302 | 3.36E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene95377 | -0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene95377 | 0.822163 | 2.74E-53 | -1.69E-46 |
| MS.gene051370 | MS.gene95377 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene051373 | MS.gene95377 | 0.825256 | 5.18E-54 | -1.69E-46 |
| MS.gene051568 | MS.gene95377 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene95377 | 0.853504 | 2.29E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene95377 | 0.863055 | 3.27E-64 | -1.69E-46 |
| MS.gene052011 | MS.gene95377 | -0.802908 | 4.49E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene95377 | 0.810839 | 9.44E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene95377 | 0.822504 | 2.29E-53 | -1.69E-46 |
| MS.gene052190 | MS.gene95377 | 0.835772 | 1.38E-56 | -1.69E-46 |
| MS.gene052255 | MS.gene95377 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene95377 | 0.838619 | 2.58E-57 | -1.69E-46 |
| MS.gene052389 | MS.gene95377 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene95377 | 0.819584 | 1.08E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene95377 | 0.857625 | 1.44E-62 | -1.69E-46 |
| MS.gene053176 | MS.gene95377 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene053201 | MS.gene95377 | 0.825593 | 4.31E-54 | -1.69E-46 |
| MS.gene053494 | MS.gene95377 | 0.853696 | 2.01E-61 | -1.69E-46 |
| MS.gene053555 | MS.gene95377 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene053584 | MS.gene95377 | 0.83035 | 3.09E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene95377 | 0.846509 | 2.08E-59 | -1.69E-46 |
| MS.gene054083 | MS.gene95377 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene95377 | 0.834836 | 2.38E-56 | -1.69E-46 |
| MS.gene05416 | MS.gene95377 | 0.807044 | 6.13E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene95377 | 0.881546 | 2.20E-70 | -1.69E-46 |
| MS.gene054291 | MS.gene95377 | -0.818226 | 2.19E-52 | -1.69E-46 |
| MS.gene054405 | MS.gene95377 | 0.841615 | 4.27E-58 | -1.69E-46 |
| MS.gene054433 | MS.gene95377 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene95377 | 0.804693 | 1.91E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene95377 | 0.822136 | 2.78E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene95377 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene95377 | 0.861059 | 1.34E-63 | -1.69E-46 |
| MS.gene054930 | MS.gene95377 | 0.865246 | 6.79E-65 | -1.69E-46 |
| MS.gene054942 | MS.gene95377 | 0.809076 | 2.26E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene95377 | 0.836434 | 9.38E-57 | -1.69E-46 |
| MS.gene05510 | MS.gene95377 | 0.834998 | 2.17E-56 | -1.69E-46 |
| MS.gene055356 | MS.gene95377 | 0.874021 | 9.35E-68 | -1.69E-46 |
| MS.gene055358 | MS.gene95377 | 0.873962 | 9.79E-68 | -1.69E-46 |
| MS.gene055367 | MS.gene95377 | 0.847326 | 1.24E-59 | -1.69E-46 |
| MS.gene05553 | MS.gene95377 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene95377 | 0.843702 | 1.19E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene95377 | 0.868419 | 6.62E-66 | -1.69E-46 |
| MS.gene05595 | MS.gene95377 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene056173 | MS.gene95377 | 0.810952 | 8.92E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene95377 | 0.854577 | 1.12E-61 | -1.69E-46 |
| MS.gene056723 | MS.gene95377 | 0.86383 | 1.88E-64 | -1.69E-46 |
| MS.gene056873 | MS.gene95377 | 0.805785 | 1.13E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene95377 | 0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene95377 | -0.802936 | 4.43E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene95377 | 0.844988 | 5.37E-59 | -1.69E-46 |
| MS.gene057060 | MS.gene95377 | 0.824881 | 6.35E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene95377 | 0.815845 | 7.50E-52 | -1.69E-46 |
| MS.gene057156 | MS.gene95377 | -0.82975 | 4.32E-55 | -1.69E-46 |
| MS.gene057200 | MS.gene95377 | 0.836474 | 9.16E-57 | -1.69E-46 |
| MS.gene057394 | MS.gene95377 | 0.809177 | 2.15E-50 | -1.69E-46 |
| MS.gene057395 | MS.gene95377 | 0.806739 | 7.11E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene95377 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene95377 | 0.847136 | 1.40E-59 | -1.69E-46 |
| MS.gene05761 | MS.gene95377 | 0.827945 | 1.18E-54 | -1.69E-46 |
| MS.gene057639 | MS.gene95377 | 0.83812 | 3.47E-57 | -1.69E-46 |
| MS.gene057750 | MS.gene95377 | 0.851737 | 7.30E-61 | -1.69E-46 |
| MS.gene057754 | MS.gene95377 | 0.806059 | 9.89E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene95377 | 0.803728 | 3.03E-49 | -1.69E-46 |
| MS.gene057929 | MS.gene95377 | 0.800981 | 1.12E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene95377 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene058139 | MS.gene95377 | 0.81293 | 3.31E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene95377 | 0.857579 | 1.48E-62 | -1.69E-46 |
| MS.gene058146 | MS.gene95377 | 0.842949 | 1.89E-58 | -1.69E-46 |
| MS.gene058426 | MS.gene95377 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene95377 | 0.807794 | 4.25E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene95377 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene95377 | 0.822493 | 2.30E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene95377 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene059124 | MS.gene95377 | 0.830189 | 3.38E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene95377 | 0.850279 | 1.88E-60 | -1.69E-46 |
| MS.gene059161 | MS.gene95377 | 0.848577 | 5.61E-60 | -1.69E-46 |
| MS.gene059162 | MS.gene95377 | 0.801991 | 6.94E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene95377 | 0.825132 | 5.54E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene95377 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene059306 | MS.gene95377 | 0.825574 | 4.35E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene95377 | 0.817595 | 3.04E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene95377 | 0.841248 | 5.33E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene95377 | 0.819695 | 1.01E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene95377 | 0.806565 | 7.73E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene95377 | -0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene060246 | MS.gene95377 | 0.828638 | 8.04E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene95377 | 0.833121 | 6.40E-56 | -1.69E-46 |
| MS.gene060495 | MS.gene95377 | 0.804603 | 2.00E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene95377 | 0.853564 | 2.20E-61 | -1.69E-46 |
| MS.gene060685 | MS.gene95377 | 0.847138 | 1.40E-59 | -1.69E-46 |
| MS.gene060802 | MS.gene95377 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene95377 | 0.820753 | 5.81E-53 | -1.69E-46 |
| MS.gene060918 | MS.gene95377 | 0.804495 | 2.10E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene95377 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene061040 | MS.gene95377 | -0.811291 | 7.53E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene95377 | 0.82014 | 8.03E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene95377 | -0.872596 | 2.82E-67 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95377.t1 | MTR_7g098910 | 90.476 | 63 | 6 | 0 | 58 | 120 | 21 | 83 | 5.59e-35 | 124 |
| MS.gene95377.t1 | MTR_3g058660 | 68.421 | 76 | 20 | 1 | 230 | 305 | 290 | 361 | 1.08e-28 | 113 |
| MS.gene95377.t1 | MTR_3g058660 | 93.333 | 45 | 3 | 0 | 210 | 254 | 2 | 46 | 2.59e-20 | 90.1 |
| MS.gene95377.t1 | MTR_0022s0450 | 73.214 | 56 | 15 | 0 | 65 | 120 | 40 | 95 | 1.42e-21 | 87.8 |
| MS.gene95377.t1 | MTR_7g099500 | 59.091 | 66 | 27 | 0 | 55 | 120 | 7 | 72 | 2.06e-20 | 85.5 |
| MS.gene95377.t1 | MTR_8g063580 | 52.778 | 72 | 34 | 0 | 49 | 120 | 2 | 73 | 3.75e-18 | 79.7 |
| MS.gene95377.t1 | MTR_6g082540 | 38.583 | 127 | 62 | 4 | 178 | 302 | 57 | 169 | 6.58e-18 | 80.1 |
| MS.gene95377.t1 | MTR_3g075390 | 66.667 | 54 | 17 | 1 | 116 | 168 | 224 | 277 | 4.32e-15 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95377.t1 | AT5G26594 | 53.968 | 63 | 29 | 0 | 58 | 120 | 17 | 79 | 8.71e-18 | 79.0 |
| MS.gene95377.t1 | AT5G50260 | 64.000 | 50 | 17 | 1 | 120 | 168 | 226 | 275 | 2.68e-12 | 67.0 |
Find 58 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTTGTATCAACAATATT+TGG | 0.161384 | 3.3:-48038459 | MS.gene95377:CDS |
| TTTCATTCACTTTCAAAATA+TGG | 0.166995 | 3.3:-48040852 | MS.gene95377:CDS |
| CTCCAATGAGAATGTTTCTT+TGG | 0.196693 | 3.3:+48039489 | None:intergenic |
| AAGTTCCGTCGATCCCTTTA+AGG | 0.208502 | 3.3:+48045413 | None:intergenic |
| TTCTATGGTACTAGCTGTTT+GGG | 0.219148 | 3.3:-48038492 | MS.gene95377:CDS |
| TAATTGATCCATTCGTTATT+TGG | 0.243206 | 3.3:+48039449 | None:intergenic |
| GGAAGATTATACTATGAAAA+AGG | 0.278195 | 3.3:-48039340 | MS.gene95377:CDS |
| GGCTGGATCCAACACCTTAA+AGG | 0.285594 | 3.3:-48045427 | MS.gene95377:CDS |
| TTTCTATGGTACTAGCTGTT+TGG | 0.287753 | 3.3:-48038493 | MS.gene95377:CDS |
| AGACAAAATGCATGGGATTA+AGG | 0.299496 | 3.3:-48038519 | MS.gene95377:CDS |
| ACATCTATGGCTACAGAAAC+AGG | 0.301972 | 3.3:+48043874 | None:intergenic |
| AGAATGTTTCTTTGGCTTCA+TGG | 0.313976 | 3.3:+48039497 | None:intergenic |
| TTCATTCACTTTCAAAATAT+GGG | 0.322109 | 3.3:-48040851 | MS.gene95377:CDS |
| TGGGATTAAGGCCATTTCTA+TGG | 0.331205 | 3.3:-48038507 | MS.gene95377:CDS |
| GTGAGGAGTGTTTCTTGTTT+CGG | 0.337873 | 3.3:+48038418 | None:intergenic |
| GCAGATGGCACAAACCTATC+AGG | 0.373500 | 3.3:-48045505 | None:intergenic |
| CAGAATTCAGAAAGAGCTAA+TGG | 0.378222 | 3.3:-48045246 | MS.gene95377:CDS |
| ATCAGATCCTCCGACATCTA+TGG | 0.391207 | 3.3:+48043861 | None:intergenic |
| CTAATGGAACCTCAAAATTC+AGG | 0.391284 | 3.3:-48045230 | MS.gene95377:CDS |
| CGTCGATCCCTTTAAGGTGT+TGG | 0.413015 | 3.3:+48045419 | None:intergenic |
| GATCCATTCGTTATTTGGTC+TGG | 0.422102 | 3.3:+48039454 | None:intergenic |
| TGATTACCTCATAGTAGAAC+TGG | 0.423082 | 3.3:+48043836 | None:intergenic |
| GCTGGATCCAACACCTTAAA+GGG | 0.429902 | 3.3:-48045426 | MS.gene95377:CDS |
| TATGCAGCACTTGTCTTAGC+AGG | 0.431417 | 3.3:-48039385 | MS.gene95377:CDS |
| AAGGAAATGCCTGTCATGAA+TGG | 0.455995 | 3.3:-48045045 | MS.gene95377:CDS |
| AGCCAAAGAAACATTCTCAT+TGG | 0.458851 | 3.3:-48039491 | MS.gene95377:CDS |
| AACAGCTAGTACCATAGAAA+TGG | 0.466085 | 3.3:+48038496 | None:intergenic |
| CTAAAAGTGTTGCAGCGGAT+TGG | 0.480545 | 3.3:+48039362 | None:intergenic |
| AATGCATCTTGATCGTTAGT+TGG | 0.482539 | 3.3:+48043916 | None:intergenic |
| TTCTTTCAAGACAAAATGCA+TGG | 0.482674 | 3.3:-48038527 | MS.gene95377:intron |
| GGCGATCAATTGACACAGTT+GGG | 0.486500 | 3.3:+48043950 | None:intergenic |
| ATCAAAAGATACATCCTGAT+AGG | 0.496120 | 3.3:+48045491 | None:intergenic |
| GATCCAGCCTCTTCATCAAA+AGG | 0.496221 | 3.3:+48045441 | None:intergenic |
| TGATTTCCAGTTCTACTATG+AGG | 0.502533 | 3.3:-48043842 | MS.gene95377:CDS |
| TGGCGATCAATTGACACAGT+TGG | 0.502936 | 3.3:+48043949 | None:intergenic |
| AGGAAATGCCTGTCATGAAT+GGG | 0.510485 | 3.3:-48045044 | MS.gene95377:CDS |
| TAGACACCAACATTTGATGA+TGG | 0.521160 | 3.3:-48045391 | MS.gene95377:intron |
| GAAAAGAATATACTATATCA+AGG | 0.526990 | 3.3:-48039416 | MS.gene95377:CDS |
| CATTCTTCAACTTTAGAAGA+GGG | 0.542067 | 3.3:-48038386 | MS.gene95377:CDS |
| CGAGGTCTATTGAAAAGAGC+TGG | 0.553107 | 3.3:-48045153 | MS.gene95377:CDS |
| ACCTCAATCCCATTCATGAC+AGG | 0.555433 | 3.3:+48045036 | None:intergenic |
| GCCTGTCATGAATGGGATTG+AGG | 0.582215 | 3.3:-48045037 | MS.gene95377:intron |
| TCTTTCAAGACAAAATGCAT+GGG | 0.582272 | 3.3:-48038526 | MS.gene95377:intron |
| TCTATGGTACTAGCTGTTTG+GGG | 0.589297 | 3.3:-48038491 | MS.gene95377:CDS |
| ACATTCTTCAACTTTAGAAG+AGG | 0.593996 | 3.3:-48038387 | MS.gene95377:CDS |
| CGTTAGTTGGAACAATCTCA+TGG | 0.602898 | 3.3:+48043929 | None:intergenic |
| CACCGACCATCATCAAATGT+TGG | 0.604150 | 3.3:+48045385 | None:intergenic |
| TCTTCCTAAAAGTGTTGCAG+CGG | 0.607054 | 3.3:+48039357 | None:intergenic |
| AGCTTATCATCATCTACAGT+AGG | 0.611286 | 3.3:+48045192 | None:intergenic |
| GTTTCTGTAGCCATAGATGT+CGG | 0.624640 | 3.3:-48043871 | MS.gene95377:CDS |
| TTTCCAGACCAAATAACGAA+TGG | 0.633752 | 3.3:-48039457 | MS.gene95377:CDS |
| CAACACCTTAAAGGGATCGA+CGG | 0.635156 | 3.3:-48045418 | MS.gene95377:CDS |
| TATGGCTACAGAAACAGGGT+TGG | 0.639985 | 3.3:+48043879 | None:intergenic |
| GCTGTAGATATTCATTGCAG+TGG | 0.642650 | 3.3:-48045096 | MS.gene95377:CDS |
| CATCTATGGCTACAGAAACA+GGG | 0.670555 | 3.3:+48043875 | None:intergenic |
| GAAGAATGTTTGCTAATGTG+AGG | 0.676409 | 3.3:+48038401 | None:intergenic |
| TCTGTAGCCATAGATGTCGG+AGG | 0.702068 | 3.3:-48043868 | MS.gene95377:CDS |
| CTTGTTCGAATGATTCATCG+AGG | 0.717669 | 3.3:-48045171 | MS.gene95377:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 48038379 | 48045523 | 48038379 | ID=MS.gene95377 |
| chr3.3 | mRNA | 48038379 | 48045523 | 48038379 | ID=MS.gene95377.t1;Parent=MS.gene95377 |
| chr3.3 | exon | 48045392 | 48045523 | 48045392 | ID=MS.gene95377.t1.exon1;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48045392 | 48045523 | 48045392 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| chr3.3 | exon | 48045038 | 48045265 | 48045038 | ID=MS.gene95377.t1.exon2;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48045038 | 48045265 | 48045038 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| chr3.3 | exon | 48043835 | 48043980 | 48043835 | ID=MS.gene95377.t1.exon3;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48043835 | 48043980 | 48043835 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| chr3.3 | exon | 48040819 | 48040877 | 48040819 | ID=MS.gene95377.t1.exon4;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48040819 | 48040877 | 48040819 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| chr3.3 | exon | 48039332 | 48039523 | 48039332 | ID=MS.gene95377.t1.exon5;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48039332 | 48039523 | 48039332 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| chr3.3 | exon | 48038379 | 48038539 | 48038379 | ID=MS.gene95377.t1.exon6;Parent=MS.gene95377.t1 |
| chr3.3 | CDS | 48038379 | 48038539 | 48038379 | ID=cds.MS.gene95377.t1;Parent=MS.gene95377.t1 |
| Gene Sequence |
| Protein sequence |
