AlfalfaGEDB | MsG0280006365.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006365.01

KEGG: K12811
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006365.01.T01	XP_024632515.1	95.27	148	7	0	5	152	244	391	3.23E-84	279

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006365.01.T01	Q8H0U8	50	152	69	4	4	152	271	418	2.45E-32	124

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006365.01.T01	G7IPH0	95.270	148	7	0	5	152	244	391	1.54e-84	279

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048058.01	MsG0280006365.01	0.811535	6.669779e-51	4.139253e-48
MsG0080048964.01	MsG0280006365.01	0.809118	2.216061e-50	1.290069e-47
MsG0180000680.01	MsG0280006365.01	0.833351	5.605571e-56	6.439166e-53
MsG0180000702.01	MsG0280006365.01	0.825093	5.657492e-54	5.106513e-51
MsG0180000703.01	MsG0280006365.01	0.865236	6.834742e-65	2.207767e-61
MsG0180000777.01	MsG0280006365.01	0.824516	7.737147e-54	6.868716e-51
MsG0180001260.01	MsG0280006365.01	0.801115	1.048263e-48	4.965688e-46
MsG0180001662.01	MsG0280006365.01	0.843869	1.074625e-58	1.704343e-55
MsG0180003031.01	MsG0280006365.01	0.836738	7.848410e-57	9.980499e-54
MsG0180003510.01	MsG0280006365.01	0.822788	1.963826e-53	1.660189e-50
MsG0180003627.01	MsG0280006365.01	0.800991	1.111628e-48	5.249552e-46
MsG0180003686.01	MsG0280006365.01	0.806015	1.010046e-49	5.423557e-47
MsG0180003807.01	MsG0280006365.01	0.806097	9.707699e-50	5.223333e-47
MsG0180003810.01	MsG0280006365.01	0.827828	1.260672e-54	1.230906e-51
MsG0180003977.01	MsG0280006365.01	0.858850	6.205506e-63	1.606129e-59
MsG0180004005.01	MsG0280006365.01	0.839587	1.449602e-57	2.010924e-54
MsG0180004180.01	MsG0280006365.01	0.863645	2.147400e-64	6.557255e-61
MsG0180004294.01	MsG0280006365.01	0.845630	3.601976e-59	6.039741e-56
MsG0180004295.01	MsG0280006365.01	0.863975	1.695854e-64	5.238257e-61
MsG0180004331.01	MsG0280006365.01	0.851683	7.567103e-61	1.543697e-57
MsG0180004372.01	MsG0280006365.01	0.821365	4.197436e-53	3.407834e-50
MsG0180004389.01	MsG0280006365.01	0.828208	1.021247e-54	1.008358e-51
MsG0180004465.01	MsG0280006365.01	0.841278	5.234939e-58	7.653073e-55
MsG0180004651.01	MsG0280006365.01	0.848358	6.451144e-60	1.180783e-56
MsG0180004930.01	MsG0280006365.01	0.801299	9.612740e-49	4.574694e-46
MsG0180004996.01	MsG0280006365.01	0.800253	1.572045e-48	7.285495e-46
MsG0180005050.01	MsG0280006365.01	0.834268	3.306468e-56	3.904045e-53
MsG0180005179.01	MsG0280006365.01	0.841307	5.143883e-58	7.526691e-55
MsG0180005250.01	MsG0280006365.01	0.802003	6.893286e-49	3.339439e-46
MsG0180005407.01	MsG0280006365.01	0.851650	7.730480e-61	1.575296e-57
MsG0180005445.01	MsG0280006365.01	0.816459	5.470993e-52	3.878626e-49
MsG0180005614.01	MsG0280006365.01	0.829982	3.794668e-55	3.945738e-52
MsG0180005786.01	MsG0280006365.01	0.804209	2.411406e-49	1.235976e-46
MsG0180005842.01	MsG0280006365.01	0.829148	6.052039e-55	6.141443e-52
MsG0180005878.01	MsG0280006365.01	0.804505	2.091964e-49	1.080436e-46
MsG0180005982.01	MsG0280006365.01	0.843700	1.192432e-58	1.881064e-55
MsG0180006098.01	MsG0280006365.01	0.876683	1.149171e-68	5.622115e-65
MsG0180006128.01	MsG0280006365.01	0.804988	1.658132e-49	8.671639e-47
MsG0180006155.01	MsG0280006365.01	0.803022	4.250046e-49	2.112956e-46
MsG0280006299.01	MsG0280006365.01	0.824852	6.446774e-54	5.779228e-51
MsG0280006364.01	MsG0280006365.01	0.809002	2.346360e-50	1.361604e-47
MsG0280006365.01	MsG0280006461.01	0.815223	1.032257e-51	7.074459e-49
MsG0280006365.01	MsG0280006593.01	0.805701	1.175573e-49	6.261977e-47
MsG0280006365.01	MsG0280007088.01	0.815997	6.938723e-52	4.857762e-49
MsG0280006365.01	MsG0280007446.01	0.811322	7.418858e-51	4.578023e-48
MsG0280006365.01	MsG0280007529.01	0.842052	3.271253e-58	4.899812e-55
MsG0280006365.01	MsG0280007564.01	0.831791	1.366483e-55	1.498674e-52
MsG0280006365.01	MsG0280007585.01	0.825356	4.901350e-54	4.456949e-51
MsG0280006365.01	MsG0280007710.01	0.821568	3.768451e-53	3.076984e-50
MsG0280006365.01	MsG0280007745.01	0.805792	1.125133e-49	6.007086e-47
MsG0280006365.01	MsG0280007815.01	0.802714	4.921887e-49	2.428011e-46
MsG0280006365.01	MsG0280007872.01	0.806899	6.574719e-50	3.611024e-47
MsG0280006365.01	MsG0280008502.01	0.802923	4.456134e-49	2.209936e-46
MsG0280006365.01	MsG0280008765.01	0.827682	1.366819e-54	1.328881e-51
MsG0280006365.01	MsG0280009350.01	0.822456	2.346586e-53	1.965129e-50
MsG0280006365.01	MsG0280009748.01	0.834698	2.579270e-56	3.084224e-53
MsG0280006365.01	MsG0280010153.01	0.807217	5.629106e-50	3.117405e-47
MsG0280006365.01	MsG0280010158.01	0.827060	1.926894e-54	1.839779e-51
MsG0280006365.01	MsG0280010233.01	0.836494	9.058049e-57	1.143348e-53
MsG0280006365.01	MsG0280010447.01	0.862154	6.196438e-64	1.796755e-60
MsG0280006365.01	MsG0280010448.01	0.833188	6.155616e-56	7.036433e-53
MsG0280006365.01	MsG0280010560.01	0.852434	4.627030e-61	9.667619e-58
MsG0280006365.01	MsG0280010599.01	0.809048	2.294078e-50	1.332945e-47
MsG0280006365.01	MsG0280010698.01	0.814681	1.361201e-51	9.193564e-49
MsG0280006365.01	MsG0280010722.01	0.842218	2.957734e-58	4.453397e-55
MsG0280006365.01	MsG0280011109.01	0.801772	7.691853e-49	3.704333e-46
MsG0280006365.01	MsG0280011293.01	0.806202	9.222409e-50	4.975871e-47
MsG0280006365.01	MsG0380012020.01	0.808966	2.388683e-50	1.384853e-47
MsG0280006365.01	MsG0380012034.01	0.801229	9.935437e-49	4.719896e-46
MsG0280006365.01	MsG0380012460.01	0.847577	1.059196e-59	1.891051e-56
MsG0280006365.01	MsG0380013754.01	0.815277	1.004044e-51	6.891810e-49
MsG0280006365.01	MsG0380014248.01	0.806706	7.221025e-50	3.946256e-47
MsG0280006365.01	MsG0380014365.01	0.809558	1.783608e-50	1.050542e-47
MsG0280006365.01	MsG0380014489.01	0.806081	9.779055e-50	5.259758e-47
MsG0280006365.01	MsG0380014537.01	0.858845	6.228609e-63	1.611832e-59
MsG0280006365.01	MsG0380014541.01	0.800541	1.373172e-48	6.410527e-46
MsG0280006365.01	MsG0380014880.01	0.802430	5.630761e-49	2.757767e-46
MsG0280006365.01	MsG0380014981.01	0.820820	5.605486e-53	4.482619e-50
MsG0280006365.01	MsG0380015497.01	0.802967	4.364093e-49	2.166671e-46
MsG0280006365.01	MsG0380015512.01	0.813390	2.622110e-51	1.710215e-48
MsG0280006365.01	MsG0380015555.01	0.834221	3.396643e-56	4.004500e-53
MsG0280006365.01	MsG0380015564.01	0.813580	2.381731e-51	1.561398e-48
MsG0280006365.01	MsG0380015713.01	0.858481	7.997806e-63	2.044264e-59
MsG0280006365.01	MsG0380016133.01	0.809171	2.158978e-50	1.258623e-47
MsG0280006365.01	MsG0380016397.01	0.802099	6.587968e-49	3.199332e-46
MsG0280006365.01	MsG0380016407.01	0.839802	1.274129e-57	1.779369e-54
MsG0280006365.01	MsG0380016561.01	0.842481	2.518845e-58	3.824667e-55
MsG0280006365.01	MsG0380016905.01	0.805338	1.400655e-49	7.391106e-47
MsG0280006365.01	MsG0380017140.01	0.822053	2.910434e-53	2.409228e-50
MsG0280006365.01	MsG0480018462.01	0.819779	9.707022e-53	7.541571e-50
MsG0280006365.01	MsG0480018465.01	0.813409	2.597500e-51	1.694988e-48
MsG0280006365.01	MsG0480018659.01	0.824424	8.132346e-54	7.199982e-51
MsG0280006365.01	MsG0480018660.01	0.814263	1.684256e-51	1.124759e-48
MsG0280006365.01	MsG0480019772.01	0.800361	1.494227e-48	6.944104e-46
MsG0280006365.01	MsG0480019785.01	0.814851	1.247933e-51	8.467271e-49
MsG0280006365.01	MsG0480019816.01	0.824048	9.970086e-54	8.733073e-51
MsG0280006365.01	MsG0480019970.01	0.825762	3.928450e-54	3.613925e-51
MsG0280006365.01	MsG0480020331.01	0.814948	1.187798e-51	8.080074e-49
MsG0280006365.01	MsG0480020447.01	0.801625	8.242494e-49	3.954775e-46
MsG0280006365.01	MsG0480020916.01	0.823840	1.115417e-53	9.714217e-51
MsG0280006365.01	MsG0480021772.01	0.812278	4.594840e-51	2.909070e-48
MsG0280006365.01	MsG0480022467.01	0.840601	7.883698e-58	1.128593e-54
MsG0280006365.01	MsG0480022476.01	0.833966	3.936387e-56	4.606033e-53
MsG0280006365.01	MsG0480022551.01	0.828767	7.487299e-55	7.512911e-52
MsG0280006365.01	MsG0480022985.01	0.828597	8.229431e-55	8.217579e-52
MsG0280006365.01	MsG0480022986.01	0.801571	8.457126e-49	4.052306e-46
MsG0280006365.01	MsG0480023025.01	0.843792	1.126754e-58	1.782524e-55
MsG0280006365.01	MsG0480023224.01	0.828312	9.641447e-55	9.547875e-52
MsG0280006365.01	MsG0480023412.01	0.831482	1.628005e-55	1.769020e-52
MsG0280006365.01	MsG0480023600.01	0.815791	7.715450e-52	5.371397e-49
MsG0280006365.01	MsG0480023873.01	0.859043	5.433896e-63	1.415537e-59
MsG0280006365.01	MsG0480024014.01	0.818268	2.141941e-52	1.595736e-49
MsG0280006365.01	MsG0580024082.01	0.821342	4.248299e-53	3.447046e-50
MsG0280006365.01	MsG0580024353.01	0.821704	3.505270e-53	2.873192e-50
MsG0280006365.01	MsG0580024618.01	0.822540	2.242980e-53	1.882953e-50
MsG0280006365.01	MsG0580024781.01	0.863406	2.547613e-64	7.714161e-61
MsG0280006365.01	MsG0580025025.01	0.812419	4.280735e-51	2.720517e-48
MsG0280006365.01	MsG0580025184.01	0.802992	4.311639e-49	2.141969e-46
MsG0280006365.01	MsG0580025439.01	0.815467	9.107147e-52	6.284335e-49
MsG0280006365.01	MsG0580025986.01	0.816020	6.858328e-52	4.804560e-49
MsG0280006365.01	MsG0580029762.01	0.825006	5.930342e-54	5.339796e-51
MsG0280006365.01	MsG0580029826.01	0.810707	1.008065e-50	6.120529e-48
MsG0280006365.01	MsG0580029926.01	0.803232	3.846024e-49	1.922459e-46
MsG0280006365.01	MsG0680030413.01	0.868184	7.884225e-66	2.826154e-62
MsG0280006365.01	MsG0680034037.01	0.823195	1.578516e-53	1.349860e-50
MsG0280006365.01	MsG0680035306.01	0.800280	1.551765e-48	7.196676e-46
MsG0280006365.01	MsG0680035340.01	0.826896	2.108667e-54	2.003773e-51
MsG0280006365.01	MsG0680035909.01	0.802245	6.147432e-49	2.996604e-46
MsG0280006365.01	MsG0780036663.01	0.843136	1.686880e-58	2.613897e-55
MsG0280006365.01	MsG0780036943.01	0.800002	1.767794e-48	8.140610e-46
MsG0280006365.01	MsG0780039144.01	0.814665	1.372613e-51	9.266322e-49
MsG0280006365.01	MsG0780039443.01	0.817849	2.663245e-52	1.961551e-49
MsG0280006365.01	MsG0780040712.01	0.830832	2.351398e-55	2.506350e-52
MsG0280006365.01	MsG0780041065.01	0.800426	1.449033e-48	6.745320e-46
MsG0280006365.01	MsG0780041210.01	0.825128	5.549101e-54	5.013618e-51
MsG0280006365.01	MsG0780041305.01	0.804282	2.328419e-49	1.195707e-46
MsG0280006365.01	MsG0780041368.01	0.802793	4.739720e-49	2.342937e-46
MsG0280006365.01	MsG0780041498.01	0.858128	1.018554e-62	2.572619e-59
MsG0280006365.01	MsG0880041854.01	0.816080	6.649689e-52	4.666160e-49
MsG0280006365.01	MsG0880042052.01	0.896211	4.586991e-76	4.914600e-72
MsG0280006365.01	MsG0880042518.01	0.819767	9.771555e-53	7.589123e-50
MsG0280006365.01	MsG0880043480.01	0.806714	7.192757e-50	3.931695e-47
MsG0280006365.01	MsG0880043804.01	0.823692	1.207697e-53	1.047542e-50
MsG0280006365.01	MsG0880045111.01	0.826257	2.996405e-54	2.795584e-51
MsG0280006365.01	MsG0880045393.01	0.800104	1.685370e-48	7.781226e-46
MsG0280006365.01	MsG0880045460.01	0.800779	1.227793e-48	5.766457e-46
MsG0280006365.01	MsG0880045619.01	0.805374	1.377023e-49	7.273096e-47
MsG0280006365.01	MsG0880045736.01	0.812477	4.157264e-51	2.646107e-48
MsG0280006365.01	MsG0880045748.01	0.861606	9.117505e-64	2.594497e-60
MsG0280006365.01	MsG0880045754.01	0.847962	8.295587e-60	1.499211e-56
MsG0280006365.01	MsG0880045777.01	0.806408	8.347925e-50	4.527428e-47
MsG0280006365.01	MsG0880045869.01	0.835758	1.392571e-56	1.719327e-53
MsG0280006365.01	MsG0880045937.01	0.805658	1.200162e-49	6.385555e-47
MsG0280006365.01	MsG0880046020.01	0.818490	1.908076e-52	1.430319e-49
MsG0280006365.01	MsG0880046027.01	0.834444	2.986180e-56	3.544518e-53
MsG0280006365.01	MsG0880046047.01	0.809182	2.146937e-50	1.251974e-47
MsG0280006365.01	MsG0880046532.01	0.828146	1.057344e-54	1.042078e-51
MsG0280006365.01	MsG0880047473.01	0.807152	5.811117e-50	3.212715e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006365.01.T01	MTR_2g007000	95.270	148	7	0	5	152	244	391	3.91e-88	279

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT1G20920	50.000	152	69	4	4	152	271	418	2.49e-33	124
MsG0280006365.01.T01	AT3G09620	53.333	135	52	4	1	135	150	273	1.31e-30	117
MsG0280006365.01.T01	AT3G09620	53.333	135	52	4	1	135	151	274	1.32e-30	117
MsG0280006365.01.T01	AT1G20920	45.783	83	42	2	70	152	1	80	6.13e-11	60.5

Find 50 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTCTCAGCCCCTTTATCTT+TGG	0.239445	2:-942580	None:intergenic
GGATGCTTTCATGAATTCTA+TGG	0.277935	2:+942486	MsG0280006365.01.T01:CDS
TGACTTGAAACCAAAGATAA+AGG	0.304960	2:+942570	MsG0280006365.01.T01:CDS
GACTTGAAACCAAAGATAAA+GGG	0.385570	2:+942571	MsG0280006365.01.T01:CDS
AAAGAGGTTGGATGATGAAA+TGG	0.396497	2:+942153	MsG0280006365.01.T01:CDS
AAAGGTTCAAATAAATCTAT+TGG	0.398381	2:+942624	MsG0280006365.01.T01:CDS
GGAAAGAAATGGACACTTGA+TGG	0.399545	2:+942280	MsG0280006365.01.T01:CDS
AAAGGGGCTGAGAGTAGAAA+TGG	0.409817	2:+942588	MsG0280006365.01.T01:CDS
AACTGGTAAACATACGAGTA+TGG	0.417487	2:+942327	MsG0280006365.01.T01:CDS
CAACCTCCTTAGCTCTTGCC+AGG	0.434087	2:-942200	None:intergenic
GCTAAGGAGGTTGGAGGAAG+AGG	0.439921	2:+942210	MsG0280006365.01.T01:CDS
GTCCATTTCTTTCCAGACTC+AGG	0.458387	2:-942271	None:intergenic
AGTGTTGTTGAACCTGAGTC+TGG	0.462097	2:+942259	MsG0280006365.01.T01:CDS
GGAAGAGGAACAAAAGAGGT+TGG	0.473996	2:+942141	MsG0280006365.01.T01:CDS
TTCAAGCCTGGCAAGAGCTA+AGG	0.488305	2:+942194	MsG0280006365.01.T01:CDS
TAATGAACCTACTGATTCAA+TGG	0.497980	2:+942378	MsG0280006365.01.T01:CDS
GAAAGAAATGGACACTTGAT+GGG	0.499261	2:+942281	MsG0280006365.01.T01:CDS
GAATTCTATGGTTCTTCCTG+AGG	0.502548	2:+942498	MsG0280006365.01.T01:CDS
ATGAAATGGAAAAGCGGAGG+AGG	0.505342	2:+942167	MsG0280006365.01.T01:CDS
GTTGCGTCTGATTTACAGAA+TGG	0.512245	2:+942424	MsG0280006365.01.T01:CDS
GTTCAAATAAATCTATTGGC+AGG	0.524487	2:+942628	MsG0280006365.01.T01:CDS
GGGTCGATTTCATCCTCTGC+AGG	0.531563	2:-942460	None:intergenic
CCGTGAGGAGGAGATGGAAG+AGG	0.540602	2:+942126	None:intergenic
GTAGAAATGGTGGACAATCA+AGG	0.541523	2:+942601	MsG0280006365.01.T01:CDS
AACCTGAGTCTGGAAAGAAA+TGG	0.542330	2:+942269	MsG0280006365.01.T01:CDS
AATTCATGAAAGCATCCAAT+GGG	0.542396	2:-942480	None:intergenic
GCAAGAGCTAAGGAGGTTGG+AGG	0.544013	2:+942204	MsG0280006365.01.T01:CDS
TCTGATGATGAAGATGGAAC+TGG	0.544266	2:+942310	MsG0280006365.01.T01:CDS
AGATGGAAGAGGAACAAAAG+AGG	0.545916	2:+942137	None:intergenic
CTGGCAAGAGCTAAGGAGGT+TGG	0.552682	2:+942201	MsG0280006365.01.T01:CDS
GGAGGAGGAAAGTTCAAGCC+TGG	0.567121	2:+942182	MsG0280006365.01.T01:CDS
GAGGAATCTGATGATGAAGA+TGG	0.571097	2:+942304	MsG0280006365.01.T01:CDS
GATTTACAGAATGGAGATGC+TGG	0.593367	2:+942433	MsG0280006365.01.T01:CDS
AAGTCAGAAGCATTATCAGA+AGG	0.597656	2:-942553	None:intergenic
AAGCCTGGCAAGAGCTAAGG+AGG	0.599145	2:+942197	MsG0280006365.01.T01:CDS
AGAGGATGAAATCGACCCAT+TGG	0.601106	2:+942465	MsG0280006365.01.T01:CDS
GAATTCATGAAAGCATCCAA+TGG	0.613023	2:-942481	None:intergenic
AATGGTGGACAATCAAGGAA+AGG	0.615667	2:+942606	MsG0280006365.01.T01:CDS
ACTTGAAACCAAAGATAAAG+GGG	0.623570	2:+942572	MsG0280006365.01.T01:CDS
GAAATGGACACTTGATGGGG+AGG	0.625730	2:+942285	MsG0280006365.01.T01:CDS
TGGATGATGAAATGGAAAAG+CGG	0.633003	2:+942161	MsG0280006365.01.T01:CDS
AGATGCTGGTGCTCCTGCAG+AGG	0.650459	2:+942447	MsG0280006365.01.T01:CDS
GGGGCTGAGAGTAGAAATGG+TGG	0.657026	2:+942591	MsG0280006365.01.T01:CDS
TCTACCGCCATTGAATCAGT+AGG	0.659454	2:-942385	None:intergenic
AATGGCGGTAGATGTTGACA+AGG	0.661828	2:+942396	MsG0280006365.01.T01:CDS
AAAGAAATGGACACTTGATG+GGG	0.672554	2:+942282	MsG0280006365.01.T01:CDS
ATGATGAAATGGAAAAGCGG+AGG	0.700220	2:+942164	MsG0280006365.01.T01:CDS
TGAACCTACTGATTCAATGG+CGG	0.715854	2:+942381	MsG0280006365.01.T01:CDS
AGTATGGATATAGACGAAGA+CGG	0.738970	2:+942343	MsG0280006365.01.T01:CDS
ATGGCGGTAGATGTTGACAA+GGG	0.741446	2:+942397	MsG0280006365.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGGTTCAAATAAATCTAT+TGG	+	Chr2:942624-942643	MsG0280006365.01.T01:CDS	20.0%
	ACTTGAAACCAAAGATAAAG+GGG	+	Chr2:942572-942591	MsG0280006365.01.T01:CDS	30.0%
	GACTTGAAACCAAAGATAAA+GGG	+	Chr2:942571-942590	MsG0280006365.01.T01:CDS	30.0%
	GTTCAAATAAATCTATTGGC+AGG	+	Chr2:942628-942647	MsG0280006365.01.T01:CDS	30.0%
	TGACTTGAAACCAAAGATAA+AGG	+	Chr2:942570-942589	MsG0280006365.01.T01:CDS	30.0%
!	TTATTAAGCTTTTCAACCTC+AGG	-	Chr2:942517-942536	None:intergenic	30.0%
!!	AATTCATGAAAGCATCCAAT+GGG	-	Chr2:942483-942502	None:intergenic	30.0%
!!	TAATGAACCTACTGATTCAA+TGG	+	Chr2:942378-942397	MsG0280006365.01.T01:CDS	30.0%
	AAAGAAATGGACACTTGATG+GGG	+	Chr2:942282-942301	MsG0280006365.01.T01:CDS	35.0%
	AAAGAGGTTGGATGATGAAA+TGG	+	Chr2:942153-942172	MsG0280006365.01.T01:CDS	35.0%
	AACTGGTAAACATACGAGTA+TGG	+	Chr2:942327-942346	MsG0280006365.01.T01:CDS	35.0%
	AGTATGGATATAGACGAAGA+CGG	+	Chr2:942343-942362	MsG0280006365.01.T01:CDS	35.0%
	GAAAGAAATGGACACTTGAT+GGG	+	Chr2:942281-942300	MsG0280006365.01.T01:CDS	35.0%
	GAGGCACAAAGAAAAAAACA+AGG	+	Chr2:942229-942248	MsG0280006365.01.T01:CDS	35.0%
	GGATGCTTTCATGAATTCTA+TGG	+	Chr2:942486-942505	MsG0280006365.01.T01:CDS	35.0%
	TGGATGATGAAATGGAAAAG+CGG	+	Chr2:942161-942180	MsG0280006365.01.T01:CDS	35.0%
!!	AAGTCAGAAGCATTATCAGA+AGG	-	Chr2:942556-942575	None:intergenic	35.0%
!!	GAATTCATGAAAGCATCCAA+TGG	-	Chr2:942484-942503	None:intergenic	35.0%
	AACCTGAGTCTGGAAAGAAA+TGG	+	Chr2:942269-942288	MsG0280006365.01.T01:CDS	40.0%
	ATGATGAAATGGAAAAGCGG+AGG	+	Chr2:942164-942183	MsG0280006365.01.T01:CDS	40.0%
	GAATTCTATGGTTCTTCCTG+AGG	+	Chr2:942498-942517	MsG0280006365.01.T01:CDS	40.0%
	GATTTACAGAATGGAGATGC+TGG	+	Chr2:942433-942452	MsG0280006365.01.T01:CDS	40.0%
	GGAAAGAAATGGACACTTGA+TGG	+	Chr2:942280-942299	MsG0280006365.01.T01:CDS	40.0%
	GTTGCGTCTGATTTACAGAA+TGG	+	Chr2:942424-942443	MsG0280006365.01.T01:CDS	40.0%
!	GAGGAATCTGATGATGAAGA+TGG	+	Chr2:942304-942323	MsG0280006365.01.T01:CDS	40.0%
!	TCTGATGATGAAGATGGAAC+TGG	+	Chr2:942310-942329	MsG0280006365.01.T01:CDS	40.0%
!!	AATGGTGGACAATCAAGGAA+AGG	+	Chr2:942606-942625	MsG0280006365.01.T01:CDS	40.0%
!!	GTAGAAATGGTGGACAATCA+AGG	+	Chr2:942601-942620	MsG0280006365.01.T01:CDS	40.0%
!!	TGAACCTACTGATTCAATGG+CGG	+	Chr2:942381-942400	MsG0280006365.01.T01:CDS	40.0%
	AAAGGGGCTGAGAGTAGAAA+TGG	+	Chr2:942588-942607	MsG0280006365.01.T01:CDS	45.0%
	AATGGCGGTAGATGTTGACA+AGG	+	Chr2:942396-942415	MsG0280006365.01.T01:CDS	45.0%
	ACTCTCAGCCCCTTTATCTT+TGG	-	Chr2:942583-942602	None:intergenic	45.0%
	AGAGGATGAAATCGACCCAT+TGG	+	Chr2:942465-942484	MsG0280006365.01.T01:CDS	45.0%
	ATGAAATGGAAAAGCGGAGG+AGG	+	Chr2:942167-942186	MsG0280006365.01.T01:CDS	45.0%
	ATGGCGGTAGATGTTGACAA+GGG	+	Chr2:942397-942416	MsG0280006365.01.T01:CDS	45.0%
	GGAAGAGGAACAAAAGAGGT+TGG	+	Chr2:942141-942160	MsG0280006365.01.T01:CDS	45.0%
	GTCCATTTCTTTCCAGACTC+AGG	-	Chr2:942274-942293	None:intergenic	45.0%
	TCTACCGCCATTGAATCAGT+AGG	-	Chr2:942388-942407	None:intergenic	45.0%
!	AGTGTTGTTGAACCTGAGTC+TGG	+	Chr2:942259-942278	MsG0280006365.01.T01:CDS	45.0%
	GAAATGGACACTTGATGGGG+AGG	+	Chr2:942285-942304	MsG0280006365.01.T01:CDS	50.0%
	TTCAAGCCTGGCAAGAGCTA+AGG	+	Chr2:942194-942213	MsG0280006365.01.T01:CDS	50.0%
	AAGCCTGGCAAGAGCTAAGG+AGG	+	Chr2:942197-942216	MsG0280006365.01.T01:CDS	55.0%
	CTGGCAAGAGCTAAGGAGGT+TGG	+	Chr2:942201-942220	MsG0280006365.01.T01:CDS	55.0%
	GCAAGAGCTAAGGAGGTTGG+AGG	+	Chr2:942204-942223	MsG0280006365.01.T01:CDS	55.0%
	GCTAAGGAGGTTGGAGGAAG+AGG	+	Chr2:942210-942229	MsG0280006365.01.T01:CDS	55.0%
	GGAGGAGGAAAGTTCAAGCC+TGG	+	Chr2:942182-942201	MsG0280006365.01.T01:CDS	55.0%
	GGGGCTGAGAGTAGAAATGG+TGG	+	Chr2:942591-942610	MsG0280006365.01.T01:CDS	55.0%
!	CAACCTCCTTAGCTCTTGCC+AGG	-	Chr2:942203-942222	None:intergenic	55.0%
!	GGGTCGATTTCATCCTCTGC+AGG	-	Chr2:942463-942482	None:intergenic	55.0%
	AGATGCTGGTGCTCCTGCAG+AGG	+	Chr2:942447-942466	MsG0280006365.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	942139	942654	942139	ID=MsG0280006365.01;Name=MsG0280006365.01
Chr2	mRNA	942139	942654	942139	ID=MsG0280006365.01.T01;Parent=MsG0280006365.01;Name=MsG0280006365.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|171
Chr2	exon	942139	942654	942139	ID=MsG0280006365.01.T01:exon:412;Parent=MsG0280006365.01.T01
Chr2	CDS	942139	942654	942139	ID=MsG0280006365.01.T01:cds;Parent=MsG0280006365.01.T01

Gene Sequence

>MsG0280006365.01.T01

ATGGAAGAGGAACAAAAGAGGTTGGATGATGAAATGGAAAAGCGGAGGAGGAAAGTTCAAGCCTGGCAAGAGCTAAGGAGGTTGGAGGAAGAGGCACAAAGAAAAAAACAAGGTGAAGCAAGTGTTGTTGAACCTGAGTCTGGAAAGAAATGGACACTTGATGGGGAGGAATCTGATGATGAAGATGGAACTGGTAAACATACGAGTATGGATATAGACGAAGACGGTAAACTTGCTGATAATGAACCTACTGATTCAATGGCGGTAGATGTTGACAAGGGAACTGTTGCGTCTGATTTACAGAATGGAGATGCTGGTGCTCCTGCAGAGGATGAAATCGACCCATTGGATGCTTTCATGAATTCTATGGTTCTTCCTGAGGTTGAAAAGCTTAATAATGCTGTTAACTCAGCACCTTCTGATAATGCTTCTGACTTGAAACCAAAGATAAAGGGGCTGAGAGTAGAAATGGTGGACAATCAAGGAAAGGTTCAAATAAATCTATTGGCAGGATAA

Protein sequence

>MsG0280006365.01.T01

MEEEQKRLDDEMEKRRRKVQAWQELRRLEEEAQRKKQGEASVVEPESGKKWTLDGEESDDEDGTGKHTSMDIDEDGKLADNEPTDSMAVDVDKGTVASDLQNGDAGAPAEDEIDPLDAFMNSMVLPEVEKLNNAVNSAPSDNASDLKPKIKGLRVEMVDNQGKVQINLLAG*