AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019772.01


Find 188 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
Chr4 gene 26806557 26815214 26806557 ID=MsG0480019772.01;Name=MsG0480019772.01
Chr4 mRNA 26806573 26815214 26806573 ID=MsG0480019772.01.T01;Parent=MsG0480019772.01;Name=MsG0480019772.01.T01;_AED=0.38;_eAED=0.38;_QI=9|1|1|1|0.33|0.46|13|492|871
Chr4 exon 26806573 26806613 26806573 ID=MsG0480019772.01.T01:exon:11690;Parent=MsG0480019772.01.T01
Chr4 exon 26806739 26807075 26806739 ID=MsG0480019772.01.T01:exon:11691;Parent=MsG0480019772.01.T01
Chr4 exon 26808362 26808539 26808362 ID=MsG0480019772.01.T01:exon:11692;Parent=MsG0480019772.01.T01
Chr4 exon 26808621 26808670 26808621 ID=MsG0480019772.01.T01:exon:11693;Parent=MsG0480019772.01.T01
Chr4 exon 26809477 26809569 26809477 ID=MsG0480019772.01.T01:exon:11694;Parent=MsG0480019772.01.T01
Chr4 exon 26809649 26809737 26809649 ID=MsG0480019772.01.T01:exon:11695;Parent=MsG0480019772.01.T01
Chr4 exon 26810310 26810388 26810310 ID=MsG0480019772.01.T01:exon:11696;Parent=MsG0480019772.01.T01
Chr4 exon 26810847 26810929 26810847 ID=MsG0480019772.01.T01:exon:11697;Parent=MsG0480019772.01.T01
Chr4 exon 26813341 26813427 26813341 ID=MsG0480019772.01.T01:exon:11700;Parent=MsG0480019772.01.T01
Chr4 exon 26813540 26814185 26813540 ID=MsG0480019772.01.T01:exon:11701;Parent=MsG0480019772.01.T01
Chr4 exon 26814581 26815214 26814581 ID=MsG0480019772.01.T01:exon:11702;Parent=MsG0480019772.01.T01
Chr4 five_prime_UTR 26806573 26806581 26806573 ID=MsG0480019772.01.T01:five_prime_utr;Parent=MsG0480019772.01.T01
Chr4 CDS 26806582 26806613 26806582 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26806739 26807075 26806739 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26808362 26808539 26808362 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26808621 26808670 26808621 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26809477 26809569 26809477 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26809649 26809737 26809649 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26810310 26810388 26810310 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26810847 26810929 26810847 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26812062 26812140 26812062 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26812234 26812954 26812234 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26813341 26813427 26813341 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26813540 26814185 26813540 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 CDS 26814581 26814722 26814581 ID=MsG0480019772.01.T01:cds;Parent=MsG0480019772.01.T01
Chr4 three_prime_UTR 26814723 26815214 26814723 ID=MsG0480019772.01.T01:three_prime_utr;Parent=MsG0480019772.01.T01
Chr4 mRNA 26806557 26813456 26806557 ID=MsG0480019772.01.T02;Parent=MsG0480019772.01;Name=MsG0480019772.01.T02;_AED=0.42;_eAED=0.55;_QI=0|0.42|0.25|1|0.57|0.62|8|0|669
Chr4 exon 26806557 26807075 26806557 ID=MsG0480019772.01.T02:exon:11703;Parent=MsG0480019772.01.T02
Chr4 exon 26808362 26808547 26808362 ID=MsG0480019772.01.T02:exon:11704;Parent=MsG0480019772.01.T02
Chr4 exon 26808621 26808665 26808621 ID=MsG0480019772.01.T02:exon:11705;Parent=MsG0480019772.01.T02
Chr4 exon 26809409 26809569 26809409 ID=MsG0480019772.01.T02:exon:11706;Parent=MsG0480019772.01.T02
Chr4 exon 26810751 26810933 26810751 ID=MsG0480019772.01.T02:exon:11707;Parent=MsG0480019772.01.T02
Chr4 exon 26813341 26813456 26813341 ID=MsG0480019772.01.T02:exon:11708;Parent=MsG0480019772.01.T02
Chr4 CDS 26806557 26807075 26806557 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26808362 26808547 26808362 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26808621 26808665 26808621 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26809409 26809569 26809409 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26810751 26810933 26810751 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26812062 26812140 26812062 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26812234 26812954 26812234 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Chr4 CDS 26813341 26813456 26813341 ID=MsG0480019772.01.T02:cds;Parent=MsG0480019772.01.T02
Gene Sequence

>MsG0480019772.01.T01

ATGGCATTTCACGTTGCTTGTCCAATTACATGTCGAAGAATTTGTTTCTGTTCGTTAGGGTTTCCGCGTTCTCTGAACGGAACGAAGAACGCGACGAAGGATTTTCTCGATGAGGTGAATTTGCTGAGTGATTTTCTCGGTGATTCACGGAAGGAAGATGGTGGAACGATTCAAGTTGCGGTGCCGAAAGTGGTGCCACCGCCGCCGCCGGAAATTGTTGCTGTTAGCGGTGGTGGTGGTGGTGGTGGTGATGTGGCTGATGAATCTGCATCCATGAAAGCTAAGCGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAGGCTTGAATCTGGTGATGTTGTGGATACATCGGGCAATCTTAATGGAGAAGAACAGGGGCAATCCAATGTAAAGGTCTTTTGTCGAATGTGCAATCGTGTCGAGAACGAAGGAAGTGAGAAAGCGAAAAAGATGCTGTCGTGTAAAAGTTGTAGTAAGAAGTACCATAGGAGCTGCTTGAAAAGTTGGTCTAATAATAGAGATTTATTTCATTGGAGTTCGTGGACCTGCCGTGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCCAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCCTACCATTGTTACTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCGAAACACACAAAGTGTCACAGTTGCGCATCCAATGTCCCTGGGAATGGACTAAGCGTGAGGTGGTTTCTGGGATACACGTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAATTACTGTCCCGTTTGTCTGAAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTACATTGCCAGTGTGATGATATTAGTGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATACATGTCCAACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAATGTTGCTGATAAAGATTTAATTACCAGCTTGAGGGCTGCAGCTGGTTTACCAACACAAGAAGAAATATTTTCCATTTCACCATATTCTGATGATGAGGATAGTGGGCCTTTGAAGTTAAAGAATGATTCTTCACGGTTTAAGCTCTCCTTTAAGAATTTTCCCAATAATTCGCCTACCAAGATGAATGATTATGGAAAGAAATCTTCGAACAAAAAGACTGCTAAGAAAAAGGACTCTCTGTCATTCATGACGGGTAAAATTGATGCACGCCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACATAGCTTGGATGATATGCAATCTCAGAGAAATGAAGGTCCTGATATTTATTCATCACCTGCTACTGGAAGCTTGAGTCAAACTGAAGCATCTTGTCCTGTCAATCAGACAGGGATTTTGAAACGTAAGTTTGATGATGAGGTGATGTTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCAAATATTTTGGATAGTGAAGAGAGTGGAAAACGTGGTGATAAGTCTCAGAATATGAAAAAGAAGAAGTTGGTTATAAATTTGGGAGCACGGAAAATTAATGTAGCTAGTTCTCCACTGTCTGATAATGCAAGCGTCCAAAGAGATCAAGATCTGGTTACTGCCAATGGAAATGAAAATCCAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGTAGCAGCTGGACATATTGATGGTAAAGGAAATAGGGTTGATTCAGGCCAATCAAAACATTTAAAGGTTTACGGAAGAGAAGGAAACACAATCAAGTTCGGAAAAGTAAAGCCAAGTGTTTCTGAATTCAACTTCACCTCTGGTAGAGGCAATATGTCGGATGGGGATGAAGTTGGTCCTTTAGAGGGATCTCACATCATGCGGGGAAAACGTAGTACTCATGGAATGATCAACCAAGTTGGATTAGGTGCAACATCAAGAGGTGAAAGGACATATTTGGCGAAGCAGTCAGAAGGTAGCTCTGATGTATATGATGAGACACATGACCATAATCACATGCCTTCACATTCTTTGCCAAAAGATTCTAAACCTTTACTGAAATTTAAAATCAAAAAGCCTATCGAAAGTCAAAATTCTCATCAGGAAGAGGAGAAGACCACAATAAAGGGCCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTTAAAGAAAGATCATTGTTTAATGACTCTGAAGGTAAAGAAAGATCATTGGTTAATGACTCTGAAGGTGCAAGTCAATCTCCTGGAGAGAATATAAATCATGAGAACATGGATGCAAACTGGATTTTGATGAAATTGGGAAGTGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGATATCCGATGATTCTTGGCACAAGGGAGAGGTGACTGGTGTAGTTGAAGGCACCTCAAATCTACATGTTACTTACGATGATGGAAAAGTGAGTATCTTGGAACTCAGGAAGCAGGGAGTTCGTTTTGTTCCTCAAAAGCAAAAGAGATCGAAAACATGA

>MsG0480019772.01.T02

TTGAAATCTAAATCTCAAACAACTTATGGCATTTCACGTTGCTTGTCCAATTACATGGTAATGCTTCTTTTTCTTACTCTTATCTTTTCTTTCTCTTCTTTTACCCTCTTCTTTTCAATTTCAATTATATATATATATGTGATTGTTTCTCTTATTATTATTATTTTCATTTTCTTCTTCAGTCGAAGAATTTGTTTCTGTTCGTTAGGGTTTCCGCGTTCTCTGAACGGAACGAAGAACGCGACGAAGGATTTTCTCGATGAGGTGAATTTGCTGAGTGATTTTCTCGGTGATTCACGGAAGGAAGATGGTGGAACGATTCAAGTTGCGGTGCCGAAAGTGGTGCCACCGCCGCCGCCGGAAATTGTTGCTGTTAGCGGTGGTGGTGGTGGTGGTGGTGATGTGGCTGATGAATCTGCATCCATGAAAGCTAAGCGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAGGCTTGAATCTGGTGATGTTGTGGATACATCGGGCAATCTTAATGGAGAAGAACAGGGGCAATCCAATGTAAAGGTCTTTTGTCGAATGTGCAATCGTGTCGAGAACGAAGGAAGTGAGAAAGCGAAAAAGATGCTGTCGTGTAAAAGTTGTAGTAAGAAGTACCATAGGAGCTGCTTGAAAAGTTGGTCTAATAATAGAGGTGAGAAGATTTATTTCATTGGAGTTCGTGGACCTGCCGTGCTTGCCGAATTTAAGTTGCTTATACCAGCTATTGTTTCACTAGAGTACTGTTTGGCTTATGTTTTGTTTGCTTCATCTAGGCTTGCAGAAGGACTGGTGATCCCAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCCTACCATTGTTACTGTCTGCAACCTCCTCATAAGCTTAAGCACTATGTTATACACTTGTGCTCACACATACACAATGTGTGTCAGGAAAGGAATTCTGACTGATCACACTGTTTTTGGCTTATTTTGTAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTACATTGCCAGTGTGATGATATTAGGTTATGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATACATGTCCAACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAATGTTGCTGATAAAGATTTAATTACCAGCTTGAGGGCTGCAGCTGGTTTACCAACACAAGAAGAAATATTTTCCATTTCACCATATTCTGATGATGAGGATAGTGGGCCTTTGAAGTTAAAGAATGATTCTTCACGGTTTAAGCTCTCCTTTAAGAATTTTCCCAATAATTCGCCTACCAAGATGAATGATTATGGAAAGAAATCTTCGAACAAAAAGACTGCTAAGAAAAAGGACTCTCTGTCATTCATGACGGGTAAAATTGATGCACGCCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACATAGCTTGGATGATATGCAATCTCAGAGAAATGAAGGTCCTGATATTTATTCATCACCTGCTACTGGAAGCTTGAGTCAAACTGAAGCATCTTGTCCTGTCAATCAGACAGGGATTTTGAAACGTAAGTTTGATGATGAGGTGATGTTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCAAATATTTTGGATAGTGAAGAGAGTGGAAAACGTGGTGATAAGTCTCAGAATATGAAAAAGAAGAAGTTGGTTATAAATTTGGGAGCACGGAAAATTAATGTAGCTAGTTCTCCACTGTCTGATAATGCAAGCGTCCAAAGAGATCAAGATCTGGTTACTGCCAATGGAAATGAAAATCCAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGTAGCAGCTGGACATATTGATGGTAAAGGTAGGGTTGTTATTTTTCCCTTTCTTTGA

Protein sequence

>MsG0480019772.01.T01

MAFHVACPITCRRICFCSLGFPRSLNGTKNATKDFLDEVNLLSDFLGDSRKEDGGTIQVAVPKVVPPPPPEIVAVSGGGGGGGDVADESASMKAKRDALQRKGAAAMIAAEEYARRLESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSEKAKKMLSCKSCSKKYHRSCLKSWSNNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTKCHSCASNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDHCQRWVHCQCDDISDERYHQFQVDGNLQYTCPTCRGECYQVKNLEDAVQELWRRKNVADKDLITSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKNDSSRFKLSFKNFPNNSPTKMNDYGKKSSNKKTAKKKDSLSFMTGKIDARHSFEGHSDIRSLHSLDDMQSQRNEGPDIYSSPATGSLSQTEASCPVNQTGILKRKFDDEVMFSDEERKPRVVRIKSNKANILDSEESGKRGDKSQNMKKKKLVINLGARKINVASSPLSDNASVQRDQDLVTANGNENPAHLTKGNKFALDRHDVAAGHIDGKGNRVDSGQSKHLKVYGREGNTIKFGKVKPSVSEFNFTSGRGNMSDGDEVGPLEGSHIMRGKRSTHGMINQVGLGATSRGERTYLAKQSEGSSDVYDETHDHNHMPSHSLPKDSKPLLKFKIKKPIESQNSHQEEEKTTIKGQRSKRKRPSPFKERSLFNDSEGKERSLVNDSEGASQSPGENINHENMDANWILMKLGSDAIGKRVEVHQISDDSWHKGEVTGVVEGTSNLHVTYDDGKVSILELRKQGVRFVPQKQKRSKT*

>MsG0480019772.01.T02

LKSKSQTTYGISRCLSNYMVMLLFLTLIFSFSSFTLFFSISIIYIYVIVSLIIIIFIFFFSRRICFCSLGFPRSLNGTKNATKDFLDEVNLLSDFLGDSRKEDGGTIQVAVPKVVPPPPPEIVAVSGGGGGGGDVADESASMKAKRDALQRKGAAAMIAAEEYARRLESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSEKAKKMLSCKSCSKKYHRSCLKSWSNNRGEKIYFIGVRGPAVLAEFKLLIPAIVSLEYCLAYVLFASSRLAEGLVIPVSSCSAKDVMVPTIVTVCNLLISLSTMLYTCAHTYTMCVRKGILTDHTVFGLFCRFTEIQSQHQWFAVIIANAGYIASVMILGYDERYHQFQVDGNLQYTCPTCRGECYQVKNLEDAVQELWRRKNVADKDLITSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKNDSSRFKLSFKNFPNNSPTKMNDYGKKSSNKKTAKKKDSLSFMTGKIDARHSFEGHSDIRSLHSLDDMQSQRNEGPDIYSSPATGSLSQTEASCPVNQTGILKRKFDDEVMFSDEERKPRVVRIKSNKANILDSEESGKRGDKSQNMKKKKLVINLGARKINVASSPLSDNASVQRDQDLVTANGNENPAHLTKGNKFALDRHDVAAGHIDGKGRVVIFPFL*