AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019785.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019785.01.T01 MTR_4g037745 96.918 292 9 0 643 934 579 870 0.0 578
MsG0480019785.01.T01 MTR_4g037745 81.214 346 38 3 219 562 260 580 3.69e-174 528
MsG0480019785.01.T01 MTR_4g037745 96.104 154 5 1 1 154 1 153 6.07e-90 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019785.01.T01 AT3G08020 44.205 371 154 8 219 580 265 591 1.78e-72 255
MsG0480019785.01.T01 AT3G08020 52.174 161 67 4 1 154 1 158 6.11e-34 140
MsG0480019785.01.T01 AT3G08020 40.693 231 103 9 727 934 560 779 1.27e-29 127
MsG0480019785.01.T01 AT3G52100 53.623 138 42 3 219 356 173 288 4.65e-36 145
MsG0480019785.01.T01 AT3G52100 42.584 209 89 6 733 934 407 591 9.42e-32 132
MsG0480019785.01.T01 AT3G52100 32.791 369 179 13 219 557 260 589 5.68e-36 146
MsG0480019785.01.T01 AT3G52100 42.584 209 89 6 733 934 494 678 1.09e-31 132
MsG0480019785.01.T01 AT3G52100 40.506 158 80 6 1 151 1 151 7.97e-19 92.4
MsG0480019785.01.T01 AT3G52100 32.520 369 180 12 219 557 278 607 8.11e-36 145
MsG0480019785.01.T01 AT3G52100 43.939 198 86 5 744 934 517 696 1.46e-31 132
MsG0480019785.01.T01 AT3G52100 37.427 171 85 6 1 151 1 169 5.50e-17 86.3
MsG0480019785.01.T01 AT3G52100 32.791 369 179 13 219 557 260 589 1.16e-35 145
MsG0480019785.01.T01 AT3G52100 40.506 158 80 6 1 151 1 151 4.18e-19 93.2
MsG0480019785.01.T01 AT3G52100 38.411 151 70 4 744 889 499 631 2.00e-16 84.3

Find 231 sgRNAs with CRISPR-Local

Find 590 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAAGTTGGTTATAAATT+TGG 0.123019 4:+27113296 MsG0480019785.01.T01:CDS
AAGCAATAAGGCAAATATTT+TGG 0.136146 4:+27113224 MsG0480019785.01.T01:CDS
AACAATGATCTTTCTTTAAA+AGG 0.142690 4:-27114451 None:intergenic
AGGCCAATCAAAACATTTAA+AGG 0.201369 4:+27114018 MsG0480019785.01.T01:CDS
CATCTTGGTAGGTGAATTAT+TGG 0.205189 4:-27112890 None:intergenic
AATAAGTTGGTTATAAATTT+GGG 0.260701 4:+27113297 MsG0480019785.01.T01:CDS
GAAATTCATAGGTGGTTTCT+AGG 0.262782 4:+27111270 MsG0480019785.01.T01:CDS
AAGAAGCATTACCATGTAAT+TGG 0.262907 4:-27107650 None:intergenic
AGCATCACGCTTAGCTTTCA+TGG 0.266381 4:-27108040 None:intergenic
ATCAGACATCCGATGATTCT+TGG 0.268452 4:+27114626 MsG0480019785.01.T01:CDS
GATTCCCATCCACTTGAAAT+TGG 0.272368 4:-27112526 None:intergenic
CCTACCAAGATGAATGATTA+TGG 0.283895 4:+27112901 MsG0480019785.01.T01:CDS
CCGCTAACAGCAACAATTTC+CGG 0.284119 4:-27107976 None:intergenic
AATGGTGACCTGTGCATTAC+AGG 0.284859 4:-27115496 None:intergenic
CTAAATCTCAAAACAACTTA+TGG 0.298424 4:+27107610 None:intergenic
GATACATCGGGCAATCTTAA+TGG 0.302122 4:+27109257 MsG0480019785.01.T01:CDS
TTTGGGTAAGCATTCTCTAT+TGG 0.306016 4:+27115332 MsG0480019785.01.T01:three_prime_UTR
TCAAAACATTTAAAGGTTTA+CGG 0.306095 4:+27114025 MsG0480019785.01.T01:CDS
AGTGAAGGTTTAGAATCTTT+TGG 0.315117 4:-27114328 None:intergenic
TTTGCAGAACATGAACTTAC+TGG 0.319396 4:-27110498 None:intergenic
CTATCCTCATCGTCAGAATA+TGG 0.325229 4:-27112808 None:intergenic
CCGTTTCTCAAGCTAAAATA+TGG 0.325656 4:-27113450 None:intergenic
CCGTTTCTCAAGCTAAAATA+TGG 0.325656 4:-27113498 None:intergenic
GGCGGCGGTGGCACCACTTT+CGG 0.327840 4:-27107952 None:intergenic
AAGAGGTGAAAGGACATATT+TGG 0.331287 4:+27114231 MsG0480019785.01.T01:CDS
GCTGGACATATTGATGTTAA+AGG 0.338929 4:+27113855 MsG0480019785.01.T01:CDS
AGAATTTGTTTCTGTTCGTT+AGG 0.339995 4:+27107802 MsG0480019785.01.T01:CDS
AGGATGCTGTTCAAGAGCTT+TGG 0.345011 4:+27112695 MsG0480019785.01.T01:CDS
TCAGGAAGTAGGGTTGATTC+AGG 0.347441 4:+27113998 MsG0480019785.01.T01:intron
CACTATGTCCTTCAAAACTA+TGG 0.351617 4:-27112999 None:intergenic
ACTTGTTTCCCTTCGTCAAA+TGG 0.359111 4:-27113806 None:intergenic
TGTTCGAATTAAAAGCAATA+AGG 0.361567 4:+27113212 MsG0480019785.01.T01:CDS
GGTCACCATTACTGTAGAAT+AGG 0.365747 4:+27115509 MsG0480019785.01.T01:three_prime_UTR
TCAAGGGCCAGAGGTCAAAA+AGG 0.379966 4:+27114416 MsG0480019785.01.T01:CDS
TCTCGATGAGGTGAATTTGC+TGG 0.386742 4:+27107870 MsG0480019785.01.T01:CDS
CTTGTTTCCCTTCGTCAAAT+GGG 0.387298 4:-27113805 None:intergenic
GGGTGAAGTTGGTCCTTTAG+AGG 0.394114 4:+27114138 MsG0480019785.01.T01:CDS
ATTTCCTGATAAATTTGAAC+AGG 0.399221 4:-27113772 None:intergenic
TTGTCGTGGGGAATGTTATC+AGG 0.399762 4:+27112568 MsG0480019785.01.T01:CDS
ATTGCCAGTGTGATGATATT+AGG 0.401375 4:+27111884 MsG0480019785.01.T01:CDS
ATGATCAACCAAGTTGGATT+AGG 0.402380 4:+27114199 MsG0480019785.01.T01:CDS
AAACTATGCCACTGATTTGA+TGG 0.402995 4:-27113585 None:intergenic
GTGTGTCAGGAAAGGAATTC+TGG 0.406332 4:+27111769 MsG0480019785.01.T01:intron
GCAGGTGATGAATAAATATC+AGG 0.409921 4:-27113075 None:intergenic
TATTAGATCTTTACGTAGCT+TGG 0.410922 4:+27113023 MsG0480019785.01.T01:CDS
CAATCTTAATGGAGAAGAAC+AGG 0.416156 4:+27109268 MsG0480019785.01.T01:CDS
AAAATCCCTGTCTGATTGAC+AGG 0.418712 4:-27113132 None:intergenic
ATCGTCAGAATATGGTGAAA+TGG 0.420114 4:-27112800 None:intergenic
ATGAGAACATGGATGCAAAC+TGG 0.421404 4:+27114554 MsG0480019785.01.T01:CDS
GAAAATATTTCTTCTTGTGT+TGG 0.421725 4:-27112778 None:intergenic
TAGAAGATTATTCATCTTTG+AGG 0.426786 4:+27115261 MsG0480019785.01.T01:three_prime_UTR
ATTTATTCATCACCTGCTAC+TGG 0.429638 4:+27113081 MsG0480019785.01.T01:CDS
GAAGGAAACACAATCAAGTT+CGG 0.431897 4:+27114052 MsG0480019785.01.T01:CDS
CCGGAAATTGTTGCTGTTAG+CGG 0.434395 4:+27107976 MsG0480019785.01.T01:CDS
TGTTTCATTAGAGTACTGTT+TGG 0.434683 4:+27110428 MsG0480019785.01.T01:intron
TCCTGTTTGTTTGAAGGTAC+CGG 0.435055 4:+27111344 MsG0480019785.01.T01:CDS
AAGGAAACACAATCAAGTTC+GGG 0.437530 4:+27114053 MsG0480019785.01.T01:CDS
CGAAAGTCAAAATTCTCATC+AGG 0.439205 4:+27114375 MsG0480019785.01.T01:CDS
ATGCTGTTCAAGAGCTTTGG+AGG 0.441727 4:+27112698 MsG0480019785.01.T01:CDS
GAATATAAATTTCACTAAAG+AGG 0.442220 4:-27115284 None:intergenic
TGATAAATTTGAACAGGAAA+AGG 0.443509 4:-27113766 None:intergenic
AAGATCCTGCAGTTCAGAAA+AGG 0.445263 4:-27115401 None:intergenic
GAATCATTCTTTAACTTCAA+AGG 0.447866 4:-27112835 None:intergenic
TTACTGTCCTGTTTGTTTGA+AGG 0.452325 4:+27111338 MsG0480019785.01.T01:CDS
CTACATGTTACTTACGATGA+TGG 0.452765 4:+27115106 MsG0480019785.01.T01:CDS
ATCTTGGTAGGTGAATTATT+GGG 0.454003 4:-27112889 None:intergenic
ACCGGTACCTTCAAACAAAC+AGG 0.454699 4:-27111345 None:intergenic
ATTGTTGCTGTTAGCGGTGG+TGG 0.455700 4:+27107982 MsG0480019785.01.T01:CDS
GAATTTGTTTCTGTTCGTTA+GGG 0.455855 4:+27107803 MsG0480019785.01.T01:CDS
TTTCCCTTCGTCAAATGGGC+TGG 0.455866 4:-27113801 None:intergenic
GTGAATTTGCCGGTGATTCA+CGG 0.457784 4:+27107893 MsG0480019785.01.T01:CDS
ACAATTTCCGGCGGCGGCGG+TGG 0.459269 4:-27107964 None:intergenic
GTTAGCGGTGGTGGTGGTGG+TGG 0.459911 4:+27107991 MsG0480019785.01.T01:CDS
TATCACCAATTTCAAGTGGA+TGG 0.460018 4:+27112521 MsG0480019785.01.T01:CDS
TATTCTGACGATGAGGATAG+TGG 0.460236 4:+27112811 MsG0480019785.01.T01:CDS
TATGCTAGGAGGCTTGAATC+TGG 0.462814 4:+27108105 MsG0480019785.01.T01:CDS
AATTTGCTGGGTGAATTTGC+CGG 0.464032 4:+27107883 MsG0480019785.01.T01:CDS
GGTGAAGTTGGTCCTTTAGA+GGG 0.464502 4:+27114139 MsG0480019785.01.T01:CDS
CTCGATGAGGTGAATTTGCT+GGG 0.465558 4:+27107871 MsG0480019785.01.T01:CDS
TGACTCAAGCTTCCAGTAGC+AGG 0.469535 4:-27113093 None:intergenic
TCTGAATTCAACTTCACCTC+TGG 0.469813 4:+27114094 MsG0480019785.01.T01:CDS
CTTTCCATAATCATTCATCT+TGG 0.470156 4:-27112905 None:intergenic
GATGCAGACTCTACCTTATG+AGG 0.470739 4:-27110560 None:intergenic
AACTCAAGTTATCCAACCCT+TGG 0.471978 4:+27115204 MsG0480019785.01.T01:exon
GCTGTTAGCGGTGGTGGTGG+TGG 0.472919 4:+27107988 MsG0480019785.01.T01:CDS
AACTATGCCACTGATTTGAT+GGG 0.478403 4:-27113584 None:intergenic
TGACCTCTGGCCCTTGATTG+TGG 0.479701 4:-27114410 None:intergenic
TTCTCCCTTCCGTGAATCAC+CGG 0.483482 4:-27107902 None:intergenic
TTAGCCGCCCAGATTGCTGC+TGG 0.483510 4:+27115307 MsG0480019785.01.T01:three_prime_UTR
GATCTTTCTTTAAAAGGTGA+AGG 0.485940 4:-27114445 None:intergenic
CTGTCTGCAACCTCCTCATA+AGG 0.486512 4:+27110547 MsG0480019785.01.T01:CDS
CGACAAGTAGGACATGTATA+CGG 0.487950 4:-27112551 None:intergenic
TCTTGTCCTGTCAATCAGAC+AGG 0.488284 4:+27113126 MsG0480019785.01.T01:CDS
GTCACCATTACTGTAGAATA+GGG 0.489777 4:+27115510 MsG0480019785.01.T01:three_prime_UTR
AGATCCTGCAGTTCAGAAAA+GGG 0.491809 4:-27115400 None:intergenic
TGATGGAAAAGTGAGTATCT+TGG 0.491862 4:+27115123 MsG0480019785.01.T01:CDS
TATCTTGGAACTCAGGAAGC+AGG 0.492514 4:+27115138 MsG0480019785.01.T01:CDS
TGCAGTTCAGAAAAGGGCTT+CGG 0.494500 4:-27115394 None:intergenic
GCTGTGATCATTGCCAACGC+TGG 0.494890 4:+27111857 MsG0480019785.01.T01:CDS
ACGTTGCTTGTCCAATTACA+TGG 0.496718 4:+27107639 MsG0480019785.01.T01:CDS
AGAGGAGAAGACCACAATCA+AGG 0.497579 4:+27114399 MsG0480019785.01.T01:CDS
GGGTTTCCGCGTTCTCTGAA+CGG 0.498481 4:+27107823 MsG0480019785.01.T01:CDS
CGTGATGCTCTTCAGAGAAA+AGG 0.498878 4:+27108054 MsG0480019785.01.T01:CDS
TGAAGGTAAAGAAAGATCAT+TGG 0.499874 4:+27114483 MsG0480019785.01.T01:CDS
GATAGACACGATGGAGCAGC+TGG 0.501466 4:+27113837 MsG0480019785.01.T01:CDS
GTAAGTAACATGTAGATTTG+AGG 0.501844 4:-27115098 None:intergenic
GAAGGTGCAAGTCAATCTCC+TGG 0.506230 4:+27114517 MsG0480019785.01.T01:CDS
AGGCACAAGGGAGAGGTGAC+TGG 0.507871 4:+27115061 MsG0480019785.01.T01:intron
TTGCAGAACATGAACTTACT+GGG 0.510009 4:-27110497 None:intergenic
TCATGATTTATATTCTCTCC+AGG 0.512210 4:-27114535 None:intergenic
TGCTGCTATGATTGCTGCTG+AGG 0.512543 4:+27108080 MsG0480019785.01.T01:CDS
ATGCAATCTCAGAGAAATGA+AGG 0.514018 4:+27113051 MsG0480019785.01.T01:CDS
GAGGAGAAGACCACAATCAA+GGG 0.514194 4:+27114400 MsG0480019785.01.T01:CDS
GCAACAATTTCCGGCGGCGG+CGG 0.514824 4:-27107967 None:intergenic
TACATGTTTGTCCAGGCACA+AGG 0.514884 4:+27115048 MsG0480019785.01.T01:intron
ACCAGCTTGAGGGCTGCAGC+TGG 0.516002 4:+27112751 MsG0480019785.01.T01:CDS
CGGGGAAAACGTAGTACTCA+TGG 0.516403 4:+27114175 MsG0480019785.01.T01:CDS
TTCAACTTCACCTCTGGTAG+AGG 0.517716 4:+27114100 MsG0480019785.01.T01:CDS
GACTCTCTGTCATTAAAGAC+GGG 0.518085 4:+27112961 MsG0480019785.01.T01:CDS
TTAAAGGTTTACGGAAGAGA+AGG 0.519410 4:+27114034 MsG0480019785.01.T01:CDS
CAAGATCTGGTTACTGCCAA+TGG 0.520282 4:+27113381 MsG0480019785.01.T01:CDS
AGTGGTGCCACCGCCGCCGC+CGG 0.520952 4:+27107957 MsG0480019785.01.T01:CDS
ATCTAGGCTTGCAGAAGGAC+CGG 0.522269 4:+27110470 MsG0480019785.01.T01:CDS
TCAAAATTCTCATCAGGAAG+AGG 0.522988 4:+27114381 MsG0480019785.01.T01:CDS
CCATAATCATTCATCTTGGT+AGG 0.524350 4:-27112901 None:intergenic
TCGACAAAAGACCTTTACAT+TGG 0.526937 4:-27109297 None:intergenic
CCGTCCCTATTCTACAGTAA+TGG 0.528459 4:-27115514 None:intergenic
AGAGTTAATTACCAGCTTGA+GGG 0.528910 4:+27112741 MsG0480019785.01.T01:CDS
CTGTGATCATTGCCAACGCT+GGG 0.532413 4:+27111858 MsG0480019785.01.T01:CDS
CTTTCAAAGAGATCAAGATC+TGG 0.533607 4:+27113368 MsG0480019785.01.T01:CDS
GATTCACGGAAGGGAGAAGA+TGG 0.535378 4:+27107907 MsG0480019785.01.T01:CDS
GGACTCTCTGTCATTAAAGA+CGG 0.538451 4:+27112960 MsG0480019785.01.T01:CDS
AAGAGTTAATTACCAGCTTG+AGG 0.540719 4:+27112740 MsG0480019785.01.T01:CDS
ACAGCAACAATTTCCGGCGG+CGG 0.541618 4:-27107970 None:intergenic
AAGTGAGTATCTTGGAACTC+AGG 0.543351 4:+27115131 MsG0480019785.01.T01:CDS
TATACATGTCCTACTTGTCG+TGG 0.545527 4:+27112554 MsG0480019785.01.T01:CDS
CAATGATCACAGCAAACCAT+TGG 0.548899 4:-27111847 None:intergenic
TCAAGTTGCGGTGCCGAAAG+TGG 0.549626 4:+27107939 MsG0480019785.01.T01:CDS
ACTCAAGTTATCCAACCCTT+GGG 0.549889 4:+27115205 MsG0480019785.01.T01:three_prime_UTR
ACCAGCTGCAGCCCTCAAGC+TGG 0.551122 4:-27112752 None:intergenic
TGATGGTCAGTGATGAAGAA+AGG 0.551814 4:+27113178 MsG0480019785.01.T01:CDS
AATAGGGACGGATGTGCCCT+AGG 0.551965 4:+27115526 MsG0480019785.01.T01:three_prime_UTR
ATCACCAATTTCAAGTGGAT+GGG 0.551981 4:+27112522 MsG0480019785.01.T01:CDS
ATGATGTGAGATCCCTCTAA+AGG 0.552018 4:-27114151 None:intergenic
CATGGAATGATCAACCAAGT+TGG 0.552171 4:+27114193 MsG0480019785.01.T01:CDS
GAGGTGACTGGTGTAGTTGA+AGG 0.554422 4:+27115073 MsG0480019785.01.T01:CDS
GTAGAGGCAATATGTCGGAT+GGG 0.555682 4:+27114116 MsG0480019785.01.T01:CDS
GAAACGTAAGTTTAATGATG+AGG 0.555914 4:+27113155 MsG0480019785.01.T01:CDS
AAATTGGGAAGTGATGCAAT+TGG 0.556017 4:+27114586 MsG0480019785.01.T01:CDS
TTTGTCCAGGCACAAGGGAG+AGG 0.556726 4:+27115054 MsG0480019785.01.T01:intron
GTGGAAGATTGTTTGTGAAA+GGG 0.560028 4:+27111313 MsG0480019785.01.T01:CDS
TGTGGAAGATTGTTTGTGAA+AGG 0.560702 4:+27111312 MsG0480019785.01.T01:CDS
TAAGTTTAATGATGAGGTGA+TGG 0.563351 4:+27113161 MsG0480019785.01.T01:CDS
ATATTGTCTAGAAGTATGAC+AGG 0.563802 4:+27111582 MsG0480019785.01.T01:intron
CGGAACGAAGAACGCGACGA+AGG 0.567316 4:+27107843 MsG0480019785.01.T01:CDS
GGTAGAGGCAATATGTCGGA+TGG 0.568298 4:+27114115 MsG0480019785.01.T01:CDS
AATGTGAAGGCATGTGATTA+TGG 0.569243 4:-27114300 None:intergenic
GCTTGAATCTGGCGATGTTG+TGG 0.569400 4:+27108116 MsG0480019785.01.T01:CDS
AGAGGGATCTCACATCATGC+GGG 0.569444 4:+27114156 MsG0480019785.01.T01:CDS
TAATCATACATCTAACACCT+AGG 0.570429 4:-27115543 None:intergenic
ACAGGGGCAATCCAATGTAA+AGG 0.572393 4:+27109286 MsG0480019785.01.T01:CDS
AAGCTAAAATATGGCGACGT+AGG 0.576045 4:-27113489 None:intergenic
CATGAACTTACTGGGATCAC+CGG 0.580670 4:-27110489 None:intergenic
GATTTCTGCCTGTAATGCAC+AGG 0.582520 4:+27115488 MsG0480019785.01.T01:three_prime_UTR
AAGATATCACCAATTTCAAG+TGG 0.584262 4:+27112517 MsG0480019785.01.T01:CDS
GTTGCTGTTAGCGGTGGTGG+TGG 0.584403 4:+27107985 MsG0480019785.01.T01:CDS
TAGAGGCAATATGTCGGATG+GGG 0.586954 4:+27114117 MsG0480019785.01.T01:CDS
ATCTTGGAACTCAGGAAGCA+GGG 0.589506 4:+27115139 MsG0480019785.01.T01:CDS
CATAAAACGATCCCAAGGGT+TGG 0.589672 4:-27115216 None:intergenic
GGATTAGGTGCAACATCAAG+AGG 0.591204 4:+27114214 MsG0480019785.01.T01:CDS
TGGTGGAACGATTCAAGTTG+CGG 0.592724 4:+27107927 MsG0480019785.01.T01:CDS
ATACATGTCCTACTTGTCGT+GGG 0.593002 4:+27112555 MsG0480019785.01.T01:CDS
ACTGGCAATGCACCCAGCGT+TGG 0.598301 4:-27111870 None:intergenic
ATTTGCCGGTGATTCACGGA+AGG 0.600718 4:+27107897 MsG0480019785.01.T01:CDS
TGAGAAAGAATTAACTGCCA+TGG 0.603080 4:-27111231 None:intergenic
GAATATAAATCATGAGAACA+TGG 0.604777 4:+27114543 MsG0480019785.01.T01:CDS
GCTTCATCTAGGCTTGCAGA+AGG 0.606594 4:+27110465 MsG0480019785.01.T01:CDS
AATCCAGCCCATTTGACGAA+GGG 0.608149 4:+27113798 MsG0480019785.01.T01:CDS
ATGTTGCACCTAATCCAACT+TGG 0.608474 4:-27114207 None:intergenic
ATTCTGACGATGAGGATAGT+GGG 0.608708 4:+27112812 MsG0480019785.01.T01:CDS
CTTGTCCTGTCAATCAGACA+GGG 0.609494 4:+27113127 MsG0480019785.01.T01:CDS
AGATTCAGAGTCAACACCAA+TGG 0.610286 4:+27111831 MsG0480019785.01.T01:CDS
TTCATGTAGACGTATACCAT+TGG 0.610805 4:-27113397 None:intergenic
AGGCACTAACCAAGAATCAT+CGG 0.613042 4:-27114635 None:intergenic
TGGTTATAAATTTGGGAGCG+CGG 0.615675 4:+27113304 MsG0480019785.01.T01:CDS
TCACGGAAGGGAGAAGATGG+TGG 0.616640 4:+27107910 MsG0480019785.01.T01:CDS
GAAATTGTTGCTGTTAGCGG+TGG 0.617826 4:+27107979 MsG0480019785.01.T01:CDS
TAGAGGGATCTCACATCATG+CGG 0.619845 4:+27114155 MsG0480019785.01.T01:CDS
TGCAATCGTGTCGAGAACGA+AGG 0.621522 4:+27109323 MsG0480019785.01.T01:CDS
AATCATACATCTAACACCTA+GGG 0.621983 4:-27115542 None:intergenic
ATGTTCTGCAAAAGATGTGA+TGG 0.623740 4:+27110509 MsG0480019785.01.T01:CDS
TTTAGCTTGAGAAACGGGGT+GGG 0.624272 4:+27113504 MsG0480019785.01.T01:CDS
TTGCTGCTGAGGAGTATGCT+AGG 0.624374 4:+27108091 MsG0480019785.01.T01:CDS
CTCCACATAAAACGATCCCA+AGG 0.627115 4:-27115221 None:intergenic
TTCACCATATTCTGACGATG+AGG 0.627848 4:+27112804 MsG0480019785.01.T01:CDS
CCATTACTGTAGAATAGGGA+CGG 0.628806 4:+27115514 MsG0480019785.01.T01:three_prime_UTR
TGTTCAGGTCAAGAATCTTG+AGG 0.629657 4:+27112675 MsG0480019785.01.T01:intron
TAACATTCCCCACGACAAGT+AGG 0.631142 4:-27112563 None:intergenic
GTGCAACATCAAGAGGTGAA+AGG 0.631308 4:+27114221 MsG0480019785.01.T01:CDS
AGAGGCAATATGTCGGATGG+GGG 0.631575 4:+27114118 MsG0480019785.01.T01:CDS
TTTGCCGGTGATTCACGGAA+GGG 0.631810 4:+27107898 MsG0480019785.01.T01:CDS
CTCTGGTAGAGGCAATATGT+CGG 0.634821 4:+27114111 MsG0480019785.01.T01:CDS
TAGCTCTGATGTATATGATG+AGG 0.637189 4:+27114270 MsG0480019785.01.T01:CDS
TTTAGCTTGAGAAACGGGGT+GGG 0.637928 4:+27113456 MsG0480019785.01.T01:CDS
TATTTGGCGAAGCAGTCAGA+AGG 0.638353 4:+27114247 MsG0480019785.01.T01:CDS
GTTCAGAAAAGGGCTTCGGT+AGG 0.639531 4:-27115390 None:intergenic
AATCTTAATGGAGAAGAACA+GGG 0.647951 4:+27109269 MsG0480019785.01.T01:CDS
TCATTGTTTAATGACTCTGA+AGG 0.648459 4:+27114466 MsG0480019785.01.T01:CDS
CGACATATTGCCTCTACCAG+AGG 0.648612 4:-27114110 None:intergenic
AAATCCAGCCCATTTGACGA+AGG 0.650722 4:+27113797 MsG0480019785.01.T01:CDS
GAGGTTGCAGACAGTAACAA+TGG 0.654117 4:-27110538 None:intergenic
TTCGTTCCGTTCAGAGAACG+CGG 0.654302 4:-27107829 None:intergenic
GGTGAAGAGAGTGGAAAACG+TGG 0.662930 4:+27113249 MsG0480019785.01.T01:CDS
CTAACCTAATATCATCACAC+TGG 0.667427 4:-27111888 None:intergenic
GAAAGAATTAACTGCCATGG+TGG 0.668298 4:-27111228 None:intergenic
ACTATGCCACTGATTTGATG+GGG 0.670274 4:-27113583 None:intergenic
TCATTGGTTAATGACTCTGA+AGG 0.671545 4:+27114499 MsG0480019785.01.T01:CDS
ACATGTTTGTCCAGGCACAA+GGG 0.672799 4:+27115049 MsG0480019785.01.T01:intron
ATCTTAATGGAGAAGAACAG+GGG 0.675777 4:+27109270 MsG0480019785.01.T01:CDS
AGACCACAATCAAGGGCCAG+AGG 0.675986 4:+27114407 MsG0480019785.01.T01:CDS
GAGGGATCTCACATCATGCG+GGG 0.683546 4:+27114157 MsG0480019785.01.T01:CDS
TACACGTGCTGTGATGCATG+TGG 0.687934 4:+27111294 MsG0480019785.01.T01:CDS
AAGTTGAATTCAGAAACACT+TGG 0.688131 4:-27114085 None:intergenic
GCAGACTCTACCTTATGAGG+AGG 0.688668 4:-27110557 None:intergenic
TACATGTCCTACTTGTCGTG+GGG 0.688869 4:+27112556 MsG0480019785.01.T01:CDS
TTTGCATTAGATAGACACGA+TGG 0.690480 4:+27113828 MsG0480019785.01.T01:CDS
CTGCTGAGGAGTATGCTAGG+AGG 0.692798 4:+27108094 MsG0480019785.01.T01:CDS
TCCACATAAAACGATCCCAA+GGG 0.693854 4:-27115220 None:intergenic
AAGCTAGCATTATCAGACAG+CGG 0.717787 4:-27113348 None:intergenic
CTAACAGCAACAATTTCCGG+CGG 0.727273 4:-27107973 None:intergenic
AAAACCAGCAGCAATCTGGG+CGG 0.740560 4:-27115311 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAAAAAAAATAAAATT+TGG + Chr4:27108777-27108796 MsG0480019785.01.T01:intron 0.0%
!! ATATATATATATATATATAT+GGG - Chr4:27110217-27110198 None:intergenic 0.0%
!! TATAAAAAAAAATAAAATTT+GGG + Chr4:27108778-27108797 MsG0480019785.01.T01:intron 0.0%
!! TATATATATATATATATATA+TGG - Chr4:27110218-27110199 None:intergenic 0.0%
!!! AAAAATAATAATATTATTTT+GGG + Chr4:27108524-27108543 MsG0480019785.01.T01:intron 0.0%
!!! ATTTTTATTAAATTTTTTTT+AGG + Chr4:27114662-27114681 MsG0480019785.01.T01:intron 0.0%
!!! TTTATTTTTTTTTATATATA+AGG - Chr4:27108774-27108793 None:intergenic 0.0%
!! AAAAAAAAAACAAATTATTC+TGG - Chr4:27110748-27110767 None:intergenic 10.0%
!! AAAATTTAATAAAAATCTGA+AGG - Chr4:27114658-27114677 None:intergenic 10.0%
!! GATTAAAACATAAATAAATT+TGG - Chr4:27109803-27109822 None:intergenic 10.0%
!! TAACAAAAAAAATTAAACAT+GGG - Chr4:27110962-27110981 None:intergenic 10.0%
!! TCTAAATATTAATGTAATAA+CGG + Chr4:27109639-27109658 MsG0480019785.01.T01:intron 10.0%
!!! TTTGATATATTTTCTAATTT+TGG + Chr4:27111469-27111488 MsG0480019785.01.T01:intron 10.0%
!! AACAAGTAATTATATATTGA+AGG - Chr4:27112604-27112623 None:intergenic 15.0%
!! ATAATAAATAATGTCATACA+CGG + Chr4:27114719-27114738 MsG0480019785.01.T01:intron 15.0%
!! ATACATAATCAAATATGAAA+TGG - Chr4:27110621-27110640 None:intergenic 15.0%
!! ATTGACATTATAACTATAAT+CGG - Chr4:27109684-27109703 None:intergenic 15.0%
!! ATTGATTATTACTTCAAAAA+TGG - Chr4:27114812-27114831 None:intergenic 15.0%
!! CTAACAAAAAAAATTAAACA+TGG - Chr4:27110963-27110982 None:intergenic 15.0%
!! GATTTGATCAATAAATTTAA+AGG + Chr4:27114967-27114986 MsG0480019785.01.T01:intron 15.0%
!!! AATAAGTTGGTTATAAATTT+GGG + Chr4:27113297-27113316 MsG0480019785.01.T01:CDS 15.0%
!!! AATAATAATATTATTTTGGG+AGG + Chr4:27108527-27108546 MsG0480019785.01.T01:intron 15.0%
!!! ACCATAATTTATTTTCATTT+TGG + Chr4:27111677-27111696 MsG0480019785.01.T01:intron 15.0%
!!! AGTATATATTGATTTTTTTC+AGG + Chr4:27108748-27108767 MsG0480019785.01.T01:intron 15.0%
!!! ATATATTTTCTAATTTTGGA+AGG + Chr4:27111473-27111492 MsG0480019785.01.T01:intron 15.0%
!!! ATATTTTCAATGTTATCAAT+AGG - Chr4:27112117-27112136 None:intergenic 15.0%
!!! ATTAAATTTTTTTTAGGCAA+TGG + Chr4:27114668-27114687 MsG0480019785.01.T01:intron 15.0%
!!! ATTTTTCTTTAAATTTCAAC+AGG - Chr4:27108510-27108529 None:intergenic 15.0%
!!! GTCTTTATTTTTTTTAACAT+GGG - Chr4:27108616-27108635 None:intergenic 15.0%
!!! TATTTTCAATGTTATCAATA+GGG - Chr4:27112116-27112135 None:intergenic 15.0%
!!! TGTCTTTATTTTTTTTAACA+TGG - Chr4:27108617-27108636 None:intergenic 15.0%
!!! TTATTAATGTTGTTTTGAAT+AGG + Chr4:27111039-27111058 MsG0480019785.01.T01:intron 15.0%
!!! TTTTGTTTTTTATTACTGAT+CGG + Chr4:27109219-27109238 MsG0480019785.01.T01:intron 15.0%
!!! TTTTTCTTTAAATTTCAACA+GGG - Chr4:27108509-27108528 None:intergenic 15.0%
!! AAAATAAAATAATGCTGAGT+GGG + Chr4:27112172-27112191 MsG0480019785.01.T01:intron 20.0%
!! AACAATGATCTTTCTTTAAA+AGG - Chr4:27114454-27114473 None:intergenic 20.0%
!! AAGTGTATAACATAGTATTT+AGG - Chr4:27111730-27111749 None:intergenic 20.0%
!! AATGATTTATTTAACAGCAT+TGG + Chr4:27114940-27114959 MsG0480019785.01.T01:intron 20.0%
!! AATTGAAATTGAAAAGAAGA+GGG - Chr4:27107725-27107744 None:intergenic 20.0%
!! AGGATAATATACAGAATAAA+AGG - Chr4:27111507-27111526 None:intergenic 20.0%
!! ATAAAATAAGCATATCAGAT+TGG - Chr4:27112474-27112493 None:intergenic 20.0%
!! ATCAAAATTTCACATAACTA+GGG - Chr4:27108154-27108173 None:intergenic 20.0%
!! CGAAACATGTAATAAATTAT+TGG - Chr4:27114760-27114779 None:intergenic 20.0%
!! GAATATAAATTTCACTAAAG+AGG - Chr4:27115287-27115306 None:intergenic 20.0%
!! GACATAACATAATAAATCAT+GGG - Chr4:27110815-27110834 None:intergenic 20.0%
!! GCCAAAATGAAAATAAATTA+TGG - Chr4:27111681-27111700 None:intergenic 20.0%
!! TAATAAATAATGTCATACAC+GGG + Chr4:27114720-27114739 MsG0480019785.01.T01:intron 20.0%
!! TAATTGAAATTGAAAAGAAG+AGG - Chr4:27107726-27107745 None:intergenic 20.0%
!! TACAAAATATTGTGAAATAC+CGG - Chr4:27108417-27108436 None:intergenic 20.0%
!! TCAAAACATTTAAAGGTTTA+CGG + Chr4:27114025-27114044 MsG0480019785.01.T01:CDS 20.0%
!! TCGTATTATATATCATATTC+CGG + Chr4:27109859-27109878 MsG0480019785.01.T01:intron 20.0%
!! TTAGAACATAACAGTATATA+TGG - Chr4:27109456-27109475 None:intergenic 20.0%
!! TTCAGCTACTATTAAAATAA+CGG + Chr4:27112024-27112043 MsG0480019785.01.T01:intron 20.0%
!!! AAACCTTTAAATGTTTTGAT+TGG - Chr4:27114024-27114043 None:intergenic 20.0%
!!! ATAATTACTTGTTTCTCAAT+TGG + Chr4:27112611-27112630 MsG0480019785.01.T01:intron 20.0%
!!! ATATATATATGTTGGTAAGA+CGG - Chr4:27110188-27110207 None:intergenic 20.0%
!!! GAATAAGTTGGTTATAAATT+TGG + Chr4:27113296-27113315 MsG0480019785.01.T01:CDS 20.0%
!!! GATTATTGTCATTTTGTTAA+AGG + Chr4:27115649-27115668 MsG0480019785.01.T01:three_prime_UTR 20.0%
!!! TATTCTGTATATTATCCTTT+TGG + Chr4:27111509-27111528 MsG0480019785.01.T01:intron 20.0%
!!! TCACTTTTATTGAAATTCAT+AGG + Chr4:27111259-27111278 MsG0480019785.01.T01:CDS 20.0%
!!! TTTATTTTTTTTAACATGGG+AGG - Chr4:27108613-27108632 None:intergenic 20.0%
! AACATAATAAATCATGGGAA+TGG - Chr4:27110810-27110829 None:intergenic 25.0%
! AATAAAAAAAATGCACTTCC+TGG + Chr4:27108640-27108659 MsG0480019785.01.T01:intron 25.0%
! AATAAAAATAAACAGCGCAT+AGG - Chr4:27109907-27109926 None:intergenic 25.0%
! AATAAATAATGTCATACACG+GGG + Chr4:27114721-27114740 MsG0480019785.01.T01:intron 25.0%
! ACATATTGATGTTAAAGGTA+GGG + Chr4:27113860-27113879 MsG0480019785.01.T01:intron 25.0%
! ACATGTAATAAATTATTGGC+TGG - Chr4:27114756-27114775 None:intergenic 25.0%
! AGTACATAGAACAATATCAA+AGG + Chr4:27111440-27111459 MsG0480019785.01.T01:intron 25.0%
! ATAAAAAAAATGCACTTCCT+GGG + Chr4:27108641-27108660 MsG0480019785.01.T01:intron 25.0%
! ATAGCATAATTTACAAGACA+AGG - Chr4:27112421-27112440 None:intergenic 25.0%
! ATTTACCACTATTACATATC+GGG + Chr4:27111962-27111981 MsG0480019785.01.T01:intron 25.0%
! ATTTCCTGATAAATTTGAAC+AGG - Chr4:27113775-27113794 None:intergenic 25.0%
! CAAAAAAAATTAAACATGGG+TGG - Chr4:27110959-27110978 None:intergenic 25.0%
! CAAAATAAAATAATGCTGAG+TGG + Chr4:27112171-27112190 MsG0480019785.01.T01:intron 25.0%
! CATCAAAATTTCACATAACT+AGG - Chr4:27108155-27108174 None:intergenic 25.0%
! CTTGAAAACTTAAGAAAGTT+TGG + Chr4:27114895-27114914 MsG0480019785.01.T01:intron 25.0%
! GAAAATATTTCTTCTTGTGT+TGG - Chr4:27112781-27112800 None:intergenic 25.0%
! GAATATAAATCATGAGAACA+TGG + Chr4:27114543-27114562 MsG0480019785.01.T01:CDS 25.0%
! GAATGTGAAAAAGAATAAGT+TGG + Chr4:27113284-27113303 MsG0480019785.01.T01:CDS 25.0%
! GATTTACCACTATTACATAT+CGG + Chr4:27111961-27111980 MsG0480019785.01.T01:intron 25.0%
! GGACATAACATAATAAATCA+TGG - Chr4:27110816-27110835 None:intergenic 25.0%
! GGCCATAAATACAATTATAA+GGG - Chr4:27110837-27110856 None:intergenic 25.0%
! GTCCCTTATAATTGTATTTA+TGG + Chr4:27110832-27110851 MsG0480019785.01.T01:intron 25.0%
! TAGAAGATTATTCATCTTTG+AGG + Chr4:27115261-27115280 MsG0480019785.01.T01:three_prime_UTR 25.0%
! TCAAAATTTATCTTCCTAGT+TGG + Chr4:27110894-27110913 MsG0480019785.01.T01:intron 25.0%
! TGATAAATTTGAACAGGAAA+AGG - Chr4:27113769-27113788 None:intergenic 25.0%
! TGGCCATAAATACAATTATA+AGG - Chr4:27110838-27110857 None:intergenic 25.0%
! TGTGGTTATTGTTTACATAT+CGG + Chr4:27112067-27112086 MsG0480019785.01.T01:intron 25.0%
! TGTTCGAATTAAAAGCAATA+AGG + Chr4:27113212-27113231 MsG0480019785.01.T01:CDS 25.0%
! TTGATATGCAAAATTTGTGA+AGG + Chr4:27108900-27108919 MsG0480019785.01.T01:intron 25.0%
! TTGTATCTGAAAAGTAACAT+AGG + Chr4:27113963-27113982 MsG0480019785.01.T01:intron 25.0%
! TTTAACAACACTAGTTCATT+TGG + Chr4:27109045-27109064 MsG0480019785.01.T01:intron 25.0%
! TTTCATGTATTGTCTGTTTA+AGG + Chr4:27109606-27109625 MsG0480019785.01.T01:intron 25.0%
!! AAAAGTTGGTCTAATAATAG+AGG + Chr4:27109413-27109432 MsG0480019785.01.T01:intron 25.0%
!! AAGCAATAAGGCAAATATTT+TGG + Chr4:27113224-27113243 MsG0480019785.01.T01:CDS 25.0%
!! ATGTAATAAATTATTGGCTG+GGG - Chr4:27114754-27114773 None:intergenic 25.0%
!! ATTTTGAACGCAATGTAAAA+AGG - Chr4:27110080-27110099 None:intergenic 25.0%
!! CATGTAATAAATTATTGGCT+GGG - Chr4:27114755-27114774 None:intergenic 25.0%
!! CTTTTATTGAAATTCATAGG+TGG + Chr4:27111262-27111281 MsG0480019785.01.T01:CDS 25.0%
!! GAACTAGTGTTGTTAAATAA+CGG - Chr4:27109042-27109061 None:intergenic 25.0%
!! GAATCATTCTTTAACTTCAA+AGG - Chr4:27112838-27112857 None:intergenic 25.0%
!! GTGGATTTCTTGTATATTTT+GGG + Chr4:27109173-27109192 MsG0480019785.01.T01:intron 25.0%
!! TGGCATAGTTTATACATTTT+AGG + Chr4:27113597-27113616 MsG0480019785.01.T01:intron 25.0%
!! TGTGGATTTCTTGTATATTT+TGG + Chr4:27109172-27109191 MsG0480019785.01.T01:intron 25.0%
!! TTTTCCTGTTCAAATTTATC+AGG + Chr4:27113768-27113787 MsG0480019785.01.T01:CDS 25.0%
!! TTTTGGCAGATTTATTTCAT+TGG + Chr4:27109507-27109526 MsG0480019785.01.T01:intron 25.0%
!!! AAACTGGATTTTGATGAAAT+TGG + Chr4:27114570-27114589 MsG0480019785.01.T01:CDS 25.0%
!!! AAATTTTGATGTGTGATTTG+TGG + Chr4:27108164-27108183 MsG0480019785.01.T01:intron 25.0%
!!! AACTGGATTTTGATGAAATT+GGG + Chr4:27114571-27114590 MsG0480019785.01.T01:CDS 25.0%
!!! AATAAGGCAAATATTTTGGA+TGG + Chr4:27113228-27113247 MsG0480019785.01.T01:CDS 25.0%
!!! AATTGATTTTGTATCCTACA+TGG + Chr4:27109936-27109955 MsG0480019785.01.T01:intron 25.0%
!!! ATGCGCTGTTTATTTTTATT+TGG + Chr4:27109907-27109926 MsG0480019785.01.T01:intron 25.0%
!!! CATAGGTTCATTTAATTTTC+AGG + Chr4:27113980-27113999 MsG0480019785.01.T01:intron 25.0%
!!! CATTTAATTTTCAGGAAGTA+GGG + Chr4:27113988-27114007 MsG0480019785.01.T01:intron 25.0%
!!! TAGGTAATTTTTTTGTCTTG+TGG + Chr4:27109154-27109173 MsG0480019785.01.T01:intron 25.0%
!!! TCATTTAATTTTCAGGAAGT+AGG + Chr4:27113987-27114006 MsG0480019785.01.T01:intron 25.0%
!!! TCTTGTATATTTTGGGAATT+AGG + Chr4:27109180-27109199 MsG0480019785.01.T01:intron 25.0%
!!! TGAAAGCTATGTTAGTTTTA+AGG + Chr4:27110871-27110890 MsG0480019785.01.T01:intron 25.0%
!!! TTGATTTTAATTCTCAGTGA+AGG - Chr4:27114346-27114365 None:intergenic 25.0%
!!! TTTTTTTTTACTCAGATGTG+TGG + Chr4:27110761-27110780 MsG0480019785.01.T01:intron 25.0%
AAAATATTGTGAAATACCGG+CGG - Chr4:27108414-27108433 None:intergenic 30.0%
AAAGAAGAGAAAGAAAAGAG+AGG - Chr4:27107700-27107719 None:intergenic 30.0%
AAGAAGAGAAAGAAAAGAGA+GGG - Chr4:27107699-27107718 None:intergenic 30.0%
AAGATATCACCAATTTCAAG+TGG + Chr4:27112517-27112536 MsG0480019785.01.T01:CDS 30.0%
AAGTATGACAGGTTTGAATT+AGG + Chr4:27111593-27111612 MsG0480019785.01.T01:intron 30.0%
AAGTTGAATTCAGAAACACT+TGG - Chr4:27114088-27114107 None:intergenic 30.0%
AATACTAAGCTCACTAGTAA+GGG - Chr4:27110585-27110604 None:intergenic 30.0%
AATCACAATCAGCTATCATT+GGG + Chr4:27111415-27111434 MsG0480019785.01.T01:intron 30.0%
AATCATACATCTAACACCTA+GGG - Chr4:27115545-27115564 None:intergenic 30.0%
AATCTTAATGGAGAAGAACA+GGG + Chr4:27109269-27109288 MsG0480019785.01.T01:CDS 30.0%
AATTCCAAGTAATCTGACAT+TGG - Chr4:27108715-27108734 None:intergenic 30.0%
ACACTTTCATTATTTAAGCG+TGG - Chr4:27109744-27109763 None:intergenic 30.0%
ACATACAGATAGATATAGAG+TGG - Chr4:27112658-27112677 None:intergenic 30.0%
ACTGTAATTCATTACAAGTC+TGG - Chr4:27115012-27115031 None:intergenic 30.0%
AGCTACTATTAAAATAACGG+TGG + Chr4:27112027-27112046 MsG0480019785.01.T01:intron 30.0%
AGGCCAATCAAAACATTTAA+AGG + Chr4:27114018-27114037 MsG0480019785.01.T01:CDS 30.0%
ATAAATAATGTCATACACGG+GGG + Chr4:27114722-27114741 MsG0480019785.01.T01:intron 30.0%
ATAACTCATACTTAATGCTC+AGG - Chr4:27113928-27113947 None:intergenic 30.0%
ATAATGCAGAATGTTAGTAC+CGG + Chr4:27110639-27110658 MsG0480019785.01.T01:intron 30.0%
ATAATTTACAAGACAAGGTC+AGG - Chr4:27112416-27112435 None:intergenic 30.0%
ATACAGATAGATATAGAGTG+GGG - Chr4:27112656-27112675 None:intergenic 30.0%
ATATAAGACACCTTCACAAA+AGG + Chr4:27110226-27110245 MsG0480019785.01.T01:intron 30.0%
ATCTTGGTAGGTGAATTATT+GGG - Chr4:27112892-27112911 None:intergenic 30.0%
ATTACCAGTTCGTAAAGAAA+CGG - Chr4:27109986-27110005 None:intergenic 30.0%
ATTTATTTCATTGGAGTTCG+TGG + Chr4:27109516-27109535 MsG0480019785.01.T01:intron 30.0%
CAAAAAGACTGCTAAGAAAA+AGG + Chr4:27112939-27112958 MsG0480019785.01.T01:CDS 30.0%
CAACATGCTAAAAGAAAATC+AGG - Chr4:27111389-27111408 None:intergenic 30.0%
CACTTTCATTATTTAAGCGT+GGG - Chr4:27109743-27109762 None:intergenic 30.0%
CATACAGATAGATATAGAGT+GGG - Chr4:27112657-27112676 None:intergenic 30.0%
CTATATCTATCTGTATGTTC+AGG + Chr4:27112660-27112679 MsG0480019785.01.T01:intron 30.0%
CTTTCCATAATCATTCATCT+TGG - Chr4:27112908-27112927 None:intergenic 30.0%
GAAACGTAAGTTTAATGATG+AGG + Chr4:27113155-27113174 MsG0480019785.01.T01:CDS 30.0%
GACATATTGATGTTAAAGGT+AGG + Chr4:27113859-27113878 MsG0480019785.01.T01:intron 30.0%
GTAAGTAACATGTAGATTTG+AGG - Chr4:27115101-27115120 None:intergenic 30.0%
GTATAACATAGTATTTAGGC+TGG - Chr4:27111726-27111745 None:intergenic 30.0%
GTTTAATCATATTGCCATGT+AGG - Chr4:27109953-27109972 None:intergenic 30.0%
TAAGTTTAATGATGAGGTGA+TGG + Chr4:27113161-27113180 MsG0480019785.01.T01:CDS 30.0%
TAATCATACATCTAACACCT+AGG - Chr4:27115546-27115565 None:intergenic 30.0%
TACTCTAATGAAACAATAGC+TGG - Chr4:27110423-27110442 None:intergenic 30.0%
TATTAGATCTTTACGTAGCT+TGG + Chr4:27113023-27113042 MsG0480019785.01.T01:CDS 30.0%
TCACTATGCAACATCAATTA+CGG + Chr4:27113653-27113672 MsG0480019785.01.T01:intron 30.0%
TCATGATTTATATTCTCTCC+AGG - Chr4:27114538-27114557 None:intergenic 30.0%
TCATTGTTTAATGACTCTGA+AGG + Chr4:27114466-27114485 MsG0480019785.01.T01:CDS 30.0%
TCATTTACATGCTTCAAAGT+TGG - Chr4:27111111-27111130 None:intergenic 30.0%
TGAAGGTAAAGAAAGATCAT+TGG + Chr4:27114483-27114502 MsG0480019785.01.T01:CDS 30.0%
TGTACCTTGAGAAAGAAAAA+AGG - Chr4:27112307-27112326 None:intergenic 30.0%
TTATAAGACAGACAGAGAAA+AGG - Chr4:27109825-27109844 None:intergenic 30.0%
! ACTTCAAAAATGGAGTATCT+GGG - Chr4:27114802-27114821 None:intergenic 30.0%
! ATATTGTCTAGAAGTATGAC+AGG + Chr4:27111582-27111601 MsG0480019785.01.T01:intron 30.0%
! CTTCTTACTACAACTTTTAC+AGG - Chr4:27109375-27109394 None:intergenic 30.0%
! CTTTTCAGATACAACTCATA+TGG - Chr4:27113957-27113976 None:intergenic 30.0%
! GACAACTTTTACACACAAAT+TGG + Chr4:27110363-27110382 MsG0480019785.01.T01:intron 30.0%
! GATCAGTGTTGTTAAATAAC+TGG + Chr4:27111929-27111948 MsG0480019785.01.T01:intron 30.0%
! GATCTTTCTTTAAAAGGTGA+AGG - Chr4:27114448-27114467 None:intergenic 30.0%
! GTTTTATGAACAGGATACAT+CGG + Chr4:27109244-27109263 MsG0480019785.01.T01:intron 30.0%
! TACTTCAAAAATGGAGTATC+TGG - Chr4:27114803-27114822 None:intergenic 30.0%
! TCTGAAATCGAGAACAAATT+AGG + Chr4:27108571-27108590 MsG0480019785.01.T01:intron 30.0%
! TTTAAAGCGCTAAATGAAGA+TGG - Chr4:27112275-27112294 None:intergenic 30.0%
! TTTTATGAACAGGATACATC+GGG + Chr4:27109245-27109264 MsG0480019785.01.T01:intron 30.0%
! TTTTTCTTACATGTTTGTCC+AGG + Chr4:27115041-27115060 MsG0480019785.01.T01:intron 30.0%
!! AAGAAGCATTACCATGTAAT+TGG - Chr4:27107653-27107672 None:intergenic 30.0%
!! AATGAAAGTGTTCTAACACT+GGG + Chr4:27109753-27109772 MsG0480019785.01.T01:intron 30.0%
!! AGAATTTGTTTCTGTTCGTT+AGG + Chr4:27107802-27107821 MsG0480019785.01.T01:CDS 30.0%
!! AGTGAAGGTTTAGAATCTTT+TGG - Chr4:27114331-27114350 None:intergenic 30.0%
!! CTTTTAATTCGAACAACTCT+GGG - Chr4:27113207-27113226 None:intergenic 30.0%
!! GAATTTGTTTCTGTTCGTTA+GGG + Chr4:27107803-27107822 MsG0480019785.01.T01:CDS 30.0%
!! GATTTTAGTGTTGTCAATTG+CGG + Chr4:27108209-27108228 MsG0480019785.01.T01:intron 30.0%
!! GTAAAGAAACGGTTGATAAA+TGG - Chr4:27109975-27109994 None:intergenic 30.0%
!! TAATGAAAGTGTTCTAACAC+TGG + Chr4:27109752-27109771 MsG0480019785.01.T01:intron 30.0%
!! TGGTGTTTAATTTGATGTGT+AGG + Chr4:27109135-27109154 MsG0480019785.01.T01:intron 30.0%
!! TGTTTCATTAGAGTACTGTT+TGG + Chr4:27110428-27110447 MsG0480019785.01.T01:intron 30.0%
!! TTATGCTATGCTGTTTGTTT+TGG + Chr4:27112432-27112451 MsG0480019785.01.T01:intron 30.0%
!!! ATATTTTAGCTTGAGAAACG+GGG + Chr4:27113452-27113471 MsG0480019785.01.T01:CDS 30.0%
!!! ATGTTTTGTTTGCTTCATCT+AGG + Chr4:27110454-27110473 MsG0480019785.01.T01:CDS 30.0%
!!! ATTATTTTGGGAGGCTAAAT+TGG + Chr4:27108536-27108555 MsG0480019785.01.T01:intron 30.0%
!!! CATATTTTAGCTTGAGAAAC+GGG + Chr4:27113451-27113470 MsG0480019785.01.T01:CDS 30.0%
!!! CCATATTTTAGCTTGAGAAA+CGG + Chr4:27113450-27113469 MsG0480019785.01.T01:CDS 30.0%
!!! CTGTTTTTGGCTTATTTTGT+AGG + Chr4:27111801-27111820 MsG0480019785.01.T01:CDS 30.0%
!!! GTTGTTATTTTTCCCTTTCT+TGG + Chr4:27113882-27113901 MsG0480019785.01.T01:intron 30.0%
!!! TAATGTTGTTTTGAATAGGC+AGG + Chr4:27111043-27111062 MsG0480019785.01.T01:intron 30.0%
!!! TGTTTTTTATTACTGATCGG+TGG + Chr4:27109222-27109241 MsG0480019785.01.T01:intron 30.0%
AAATTGGGAAGTGATGCAAT+TGG + Chr4:27114586-27114605 MsG0480019785.01.T01:CDS 35.0%
AAGAGATCTAGAGAAAAGAC+CGG - Chr4:27111366-27111385 None:intergenic 35.0%
AAGAGGTGAAAGGACATATT+TGG + Chr4:27114231-27114250 MsG0480019785.01.T01:CDS 35.0%
AAGAGTTAATTACCAGCTTG+AGG + Chr4:27112740-27112759 MsG0480019785.01.T01:CDS 35.0%
AAGGAAACACAATCAAGTTC+GGG + Chr4:27114053-27114072 MsG0480019785.01.T01:CDS 35.0%
ACACACAAATTGGATGTCTT+TGG + Chr4:27110373-27110392 MsG0480019785.01.T01:intron 35.0%
ACCTTGAGAAAGAAAAAAGG+TGG - Chr4:27112304-27112323 None:intergenic 35.0%
ACGCATTCAGCAAAAGAATT+TGG - Chr4:27110927-27110946 None:intergenic 35.0%
AGAGTTAATTACCAGCTTGA+GGG + Chr4:27112741-27112760 MsG0480019785.01.T01:CDS 35.0%
ATCACAATCAGCTATCATTG+GGG + Chr4:27111416-27111435 MsG0480019785.01.T01:intron 35.0%
ATCGTCAGAATATGGTGAAA+TGG - Chr4:27112803-27112822 None:intergenic 35.0%
ATCTTAATGGAGAAGAACAG+GGG + Chr4:27109270-27109289 MsG0480019785.01.T01:CDS 35.0%
ATGCAATCTCAGAGAAATGA+AGG + Chr4:27113051-27113070 MsG0480019785.01.T01:CDS 35.0%
ATGGGAGGAGATTTGAATTA+GGG - Chr4:27108598-27108617 None:intergenic 35.0%
ATGTTCTGCAAAAGATGTGA+TGG + Chr4:27110509-27110528 MsG0480019785.01.T01:CDS 35.0%
ATTGCCAGTGTGATGATATT+AGG + Chr4:27111884-27111903 MsG0480019785.01.T01:CDS 35.0%
ATTTATTCATCACCTGCTAC+TGG + Chr4:27113081-27113100 MsG0480019785.01.T01:CDS 35.0%
CAATACTAAGCTCACTAGTA+AGG - Chr4:27110586-27110605 None:intergenic 35.0%
CAATCACAATCAGCTATCAT+TGG + Chr4:27111414-27111433 MsG0480019785.01.T01:intron 35.0%
CAATCTTAATGGAGAAGAAC+AGG + Chr4:27109268-27109287 MsG0480019785.01.T01:CDS 35.0%
CACTATGTCCTTCAAAACTA+TGG - Chr4:27113002-27113021 None:intergenic 35.0%
CATCTTGGTAGGTGAATTAT+TGG - Chr4:27112893-27112912 None:intergenic 35.0%
CCATAATCATTCATCTTGGT+AGG - Chr4:27112904-27112923 None:intergenic 35.0%
CCGAATTTGTGAGGTAATAA+CGG + Chr4:27109553-27109572 MsG0480019785.01.T01:intron 35.0%
CCGTTATTACCTCACAAATT+CGG - Chr4:27109556-27109575 None:intergenic 35.0%
CCGTTTCTCAAGCTAAAATA+TGG - Chr4:27113453-27113472 None:intergenic 35.0%
CCTACCAAGATGAATGATTA+TGG + Chr4:27112901-27112920 MsG0480019785.01.T01:CDS 35.0%
CGAAAGTCAAAATTCTCATC+AGG + Chr4:27114375-27114394 MsG0480019785.01.T01:CDS 35.0%
CGAATTTGTGAGGTAATAAC+GGG + Chr4:27109554-27109573 MsG0480019785.01.T01:intron 35.0%
CTAACCTAATATCATCACAC+TGG - Chr4:27111891-27111910 None:intergenic 35.0%
CTTTCAAAGAGATCAAGATC+TGG + Chr4:27113368-27113387 MsG0480019785.01.T01:CDS 35.0%
GAAACTAAAAACACGTCACA+AGG - Chr4:27110121-27110140 None:intergenic 35.0%
GAAATTCATAGGTGGTTTCT+AGG + Chr4:27111270-27111289 MsG0480019785.01.T01:CDS 35.0%
GAAGGAAACACAATCAAGTT+CGG + Chr4:27114052-27114071 MsG0480019785.01.T01:CDS 35.0%
GCAGGTGATGAATAAATATC+AGG - Chr4:27113078-27113097 None:intergenic 35.0%
GCTGGACATATTGATGTTAA+AGG + Chr4:27113855-27113874 MsG0480019785.01.T01:CDS 35.0%
GTCACCATTACTGTAGAATA+GGG + Chr4:27115510-27115529 MsG0480019785.01.T01:three_prime_UTR 35.0%
GTCTAATAATAGAGGTGAGA+AGG + Chr4:27109421-27109440 MsG0480019785.01.T01:intron 35.0%
GTGGAAGATTGTTTGTGAAA+GGG + Chr4:27111313-27111332 MsG0480019785.01.T01:CDS 35.0%
GTGTCAGTGTTGTCAAATAT+CGG + Chr4:27108444-27108463 MsG0480019785.01.T01:intron 35.0%
TAATGCAGAATGTTAGTACC+GGG + Chr4:27110640-27110659 MsG0480019785.01.T01:intron 35.0%
TAGACCAATGTCAGATTACT+TGG + Chr4:27108708-27108727 MsG0480019785.01.T01:intron 35.0%
TCAAAATTCTCATCAGGAAG+AGG + Chr4:27114381-27114400 MsG0480019785.01.T01:CDS 35.0%
TCGACAAAAGACCTTTACAT+TGG - Chr4:27109300-27109319 None:intergenic 35.0%
TCTAATTCCGCTATGCAAAT+GGG + Chr4:27108383-27108402 MsG0480019785.01.T01:intron 35.0%
TCTTCTCATGTGCTTCATTT+AGG + Chr4:27110139-27110158 MsG0480019785.01.T01:intron 35.0%
TGAGAAAGAATTAACTGCCA+TGG - Chr4:27111234-27111253 None:intergenic 35.0%
TGATGGAAAAGTGAGTATCT+TGG + Chr4:27115123-27115142 MsG0480019785.01.T01:CDS 35.0%
TGTATGCACATGATCTTGAA+TGG + Chr4:27113706-27113725 MsG0480019785.01.T01:intron 35.0%
TGTATTTATGGCCACATGAT+TGG + Chr4:27110844-27110863 MsG0480019785.01.T01:intron 35.0%
TGTGGAAGATTGTTTGTGAA+AGG + Chr4:27111312-27111331 MsG0480019785.01.T01:CDS 35.0%
TGTGTTTGAAAATTGAGCTG+TGG + Chr4:27108295-27108314 MsG0480019785.01.T01:intron 35.0%
TTAAAGGTTTACGGAAGAGA+AGG + Chr4:27114034-27114053 MsG0480019785.01.T01:CDS 35.0%
TTACTGTCCTGTTTGTTTGA+AGG + Chr4:27111338-27111357 MsG0480019785.01.T01:CDS 35.0%
TTCATGTAGACGTATACCAT+TGG - Chr4:27113400-27113419 None:intergenic 35.0%
TTCTAATTCCGCTATGCAAA+TGG + Chr4:27108382-27108401 MsG0480019785.01.T01:intron 35.0%
TTGCAGAACATGAACTTACT+GGG - Chr4:27110500-27110519 None:intergenic 35.0%
TTGTTATGTTTGTGTATGCG+TGG + Chr4:27109115-27109134 MsG0480019785.01.T01:intron 35.0%
TTTACCATTTCCAAAACCCT+CGG - Chr4:27111014-27111033 None:intergenic 35.0%
TTTGCAGAACATGAACTTAC+TGG - Chr4:27110501-27110520 None:intergenic 35.0%
TTTGCATTAGATAGACACGA+TGG + Chr4:27113828-27113847 MsG0480019785.01.T01:CDS 35.0%
TTTGGGTAAGCATTCTCTAT+TGG + Chr4:27115332-27115351 MsG0480019785.01.T01:three_prime_UTR 35.0%
! AATGTGAAGGCATGTGATTA+TGG - Chr4:27114303-27114322 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG - Chr4:27110239-27110258 None:intergenic 35.0%
! ATCACCAATTTCAAGTGGAT+GGG + Chr4:27112522-27112541 MsG0480019785.01.T01:CDS 35.0%
! ATGATCAACCAAGTTGGATT+AGG + Chr4:27114199-27114218 MsG0480019785.01.T01:CDS 35.0%
! CTACATGTTACTTACGATGA+TGG + Chr4:27115106-27115125 MsG0480019785.01.T01:CDS 35.0%
! CTTCAAAAATGGAGTATCTG+GGG - Chr4:27114801-27114820 None:intergenic 35.0%
! GCAATTTCAGTTTTCTTGGA+AGG + Chr4:27115356-27115375 MsG0480019785.01.T01:three_prime_UTR 35.0%
! TATCACCAATTTCAAGTGGA+TGG + Chr4:27112521-27112540 MsG0480019785.01.T01:CDS 35.0%
! TCATTGGTTAATGACTCTGA+AGG + Chr4:27114499-27114518 MsG0480019785.01.T01:CDS 35.0%
! TCTTTTGGCAAAGAATGTGA+AGG - Chr4:27114316-27114335 None:intergenic 35.0%
! TGGAGCAATTTCAGTTTTCT+TGG + Chr4:27115352-27115371 MsG0480019785.01.T01:three_prime_UTR 35.0%
! TTCAAAAATGGAGTATCTGG+GGG - Chr4:27114800-27114819 None:intergenic 35.0%
!! AAACTATGCCACTGATTTGA+TGG - Chr4:27113588-27113607 None:intergenic 35.0%
!! AACTATGCCACTGATTTGAT+GGG - Chr4:27113587-27113606 None:intergenic 35.0%
!! AATTTGGCTTTCTTCCAACT+AGG - Chr4:27110911-27110930 None:intergenic 35.0%
!! ATGAAAGTGTTCTAACACTG+GGG + Chr4:27109754-27109773 MsG0480019785.01.T01:intron 35.0%
!! GCTTTTAATTCGAACAACTC+TGG - Chr4:27113208-27113227 None:intergenic 35.0%
!! GTTGTAGTAAGAAGTACCAT+AGG + Chr4:27109381-27109400 MsG0480019785.01.T01:intron 35.0%
!! TACATATAGATGCTTGCTGT+TGG + Chr4:27112323-27112342 MsG0480019785.01.T01:intron 35.0%
!! TAGCTCTGATGTATATGATG+AGG + Chr4:27114270-27114289 MsG0480019785.01.T01:CDS 35.0%
!! TTCGATCTCTTTTGCTTTTG+AGG - Chr4:27115178-27115197 None:intergenic 35.0%
!!! TCCACCTTTTTTCTTTCTCA+AGG + Chr4:27112300-27112319 MsG0480019785.01.T01:intron 35.0%
AAAATCCCTGTCTGATTGAC+AGG - Chr4:27113135-27113154 None:intergenic 40.0%
AAAATTGAGCTGTGGAGTCA+TGG + Chr4:27108303-27108322 MsG0480019785.01.T01:intron 40.0%
AAAATTTGGGCCCTCGAATA+TGG + Chr4:27108791-27108810 MsG0480019785.01.T01:intron 40.0%
AACTCAAGTTATCCAACCCT+TGG + Chr4:27115204-27115223 MsG0480019785.01.T01:exon 40.0%
AAGAGTCACAGATCCAAGAA+AGG - Chr4:27113898-27113917 None:intergenic 40.0%
AAGATCCTGCAGTTCAGAAA+AGG - Chr4:27115404-27115423 None:intergenic 40.0%
AAGCTAAAATATGGCGACGT+AGG - Chr4:27113492-27113511 None:intergenic 40.0%
AAGCTAGCATTATCAGACAG+CGG - Chr4:27113351-27113370 None:intergenic 40.0%
AAGTGAGTATCTTGGAACTC+AGG + Chr4:27115131-27115150 MsG0480019785.01.T01:CDS 40.0%
ACACACAGAATGAAAACACG+CGG - Chr4:27109482-27109501 None:intergenic 40.0%
ACACATACACAATGTGTGTC+AGG + Chr4:27111756-27111775 MsG0480019785.01.T01:intron 40.0%
ACACGTCACAAGGAAATAAG+TGG - Chr4:27110111-27110130 None:intergenic 40.0%
ACGCTATTCAATGTTGTCGA+TGG - Chr4:27108991-27109010 None:intergenic 40.0%
ACGTTGCTTGTCCAATTACA+TGG + Chr4:27107639-27107658 MsG0480019785.01.T01:CDS 40.0%
ACTCAAGTTATCCAACCCTT+GGG + Chr4:27115205-27115224 MsG0480019785.01.T01:three_prime_UTR 40.0%
ACTTGTTTCCCTTCGTCAAA+TGG - Chr4:27113809-27113828 None:intergenic 40.0%
AGAGTCACAGATCCAAGAAA+GGG - Chr4:27113897-27113916 None:intergenic 40.0%
AGATCCTGCAGTTCAGAAAA+GGG - Chr4:27115403-27115422 None:intergenic 40.0%
AGATTCAGAGTCAACACCAA+TGG + Chr4:27111831-27111850 MsG0480019785.01.T01:CDS 40.0%
AGGCACTAACCAAGAATCAT+CGG - Chr4:27114638-27114657 None:intergenic 40.0%
ATACATGTCCTACTTGTCGT+GGG + Chr4:27112555-27112574 MsG0480019785.01.T01:CDS 40.0%
ATAGGAGCTGCTTGAAAAGT+TGG + Chr4:27109399-27109418 MsG0480019785.01.T01:intron 40.0%
ATATCCTGCATTTAGACTCG+CGG - Chr4:27111536-27111555 None:intergenic 40.0%
ATCAGACATCCGATGATTCT+TGG + Chr4:27114626-27114645 MsG0480019785.01.T01:CDS 40.0%
ATGAGAACATGGATGCAAAC+TGG + Chr4:27114554-27114573 MsG0480019785.01.T01:CDS 40.0%
ATGATGTGAGATCCCTCTAA+AGG - Chr4:27114154-27114173 None:intergenic 40.0%
ATGGTGGCTCATCAAAACTA+AGG - Chr4:27111215-27111234 None:intergenic 40.0%
ATGTTGCACCTAATCCAACT+TGG - Chr4:27114210-27114229 None:intergenic 40.0%
ATTCTGACGATGAGGATAGT+GGG + Chr4:27112812-27112831 MsG0480019785.01.T01:CDS 40.0%
CAATGATCACAGCAAACCAT+TGG - Chr4:27111850-27111869 None:intergenic 40.0%
CATGGAATGATCAACCAAGT+TGG + Chr4:27114193-27114212 MsG0480019785.01.T01:CDS 40.0%
CATGGGAGGAGATTTGAATT+AGG - Chr4:27108599-27108618 None:intergenic 40.0%
CCAAACCCGATATGTAATAG+TGG - Chr4:27111970-27111989 None:intergenic 40.0%
CCACTATTACATATCGGGTT+TGG + Chr4:27111967-27111986 MsG0480019785.01.T01:intron 40.0%
CCATTACTGTAGAATAGGGA+CGG + Chr4:27115514-27115533 MsG0480019785.01.T01:three_prime_UTR 40.0%
CGACAAGTAGGACATGTATA+CGG - Chr4:27112554-27112573 None:intergenic 40.0%
CTATCCTCATCGTCAGAATA+TGG - Chr4:27112811-27112830 None:intergenic 40.0%
CTATTCAATGTTGTCGATGG+CGG - Chr4:27108988-27109007 None:intergenic 40.0%
CTCATACTTAATGCTCAGGA+AGG - Chr4:27113924-27113943 None:intergenic 40.0%
CTGGGGGAAACATAAAATGA+TGG - Chr4:27114784-27114803 None:intergenic 40.0%
CTGTGACACTTTGTGTGTTT+CGG - Chr4:27110678-27110697 None:intergenic 40.0%
CTTGTTTCCCTTCGTCAAAT+GGG - Chr4:27113808-27113827 None:intergenic 40.0%
GAAAGAATTAACTGCCATGG+TGG - Chr4:27111231-27111250 None:intergenic 40.0%
GACTCTCTGTCATTAAAGAC+GGG + Chr4:27112961-27112980 MsG0480019785.01.T01:CDS 40.0%
GATACATCGGGCAATCTTAA+TGG + Chr4:27109257-27109276 MsG0480019785.01.T01:CDS 40.0%
GATTCCCATCCACTTGAAAT+TGG - Chr4:27112529-27112548 None:intergenic 40.0%
GCTTTCATCTTCCAATCATG+TGG - Chr4:27110858-27110877 None:intergenic 40.0%
GGACTCTCTGTCATTAAAGA+CGG + Chr4:27112960-27112979 MsG0480019785.01.T01:CDS 40.0%
GGTCACCATTACTGTAGAAT+AGG + Chr4:27115509-27115528 MsG0480019785.01.T01:three_prime_UTR 40.0%
GTTCTAATTCCTCTGTGCAA+CGG + Chr4:27108238-27108257 MsG0480019785.01.T01:intron 40.0%
TACACAATGTGTGTCAGGAA+AGG + Chr4:27111761-27111780 MsG0480019785.01.T01:intron 40.0%
TATACATGTCCTACTTGTCG+TGG + Chr4:27112554-27112573 MsG0480019785.01.T01:CDS 40.0%
TATTCTGACGATGAGGATAG+TGG + Chr4:27112811-27112830 MsG0480019785.01.T01:CDS 40.0%
TCAACCGTTTCTTTACGAAC+TGG + Chr4:27109979-27109998 MsG0480019785.01.T01:intron 40.0%
TCCACATAAAACGATCCCAA+GGG - Chr4:27115223-27115242 None:intergenic 40.0%
TCTGAATTCAACTTCACCTC+TGG + Chr4:27114094-27114113 MsG0480019785.01.T01:CDS 40.0%
TGATGGTCAGTGATGAAGAA+AGG + Chr4:27113178-27113197 MsG0480019785.01.T01:CDS 40.0%
TGGCTCATCAAAACTAAGGA+CGG - Chr4:27111211-27111230 None:intergenic 40.0%
TGGGAGGAGATTTGAATTAG+GGG - Chr4:27108597-27108616 None:intergenic 40.0%
TGGTTATAAATTTGGGAGCG+CGG + Chr4:27113304-27113323 MsG0480019785.01.T01:CDS 40.0%
TGTGACACTTTGTGTGTTTC+GGG - Chr4:27110677-27110696 None:intergenic 40.0%
TGTTCAGGTCAAGAATCTTG+AGG + Chr4:27112675-27112694 MsG0480019785.01.T01:intron 40.0%
TTAGTGATGAGACGTTACCT+AGG - Chr4:27112237-27112256 None:intergenic 40.0%
TTCACCATATTCTGACGATG+AGG + Chr4:27112804-27112823 MsG0480019785.01.T01:CDS 40.0%
TTTACTCAGATGTGTGGTGT+TGG + Chr4:27110767-27110786 MsG0480019785.01.T01:intron 40.0%
TTTAGTGTTGTCAATTGCGG+CGG + Chr4:27108212-27108231 MsG0480019785.01.T01:intron 40.0%
! ATAACGGTGGCTTTTTGCAT+TGG + Chr4:27112040-27112059 MsG0480019785.01.T01:intron 40.0%
! ATTTTGGATGGTGAAGAGAG+TGG + Chr4:27113240-27113259 MsG0480019785.01.T01:CDS 40.0%
! GTAATCTGACATTGGTCTAG+TGG - Chr4:27108707-27108726 None:intergenic 40.0%
! TCCTGTTTGTTTGAAGGTAC+CGG + Chr4:27111344-27111363 MsG0480019785.01.T01:CDS 40.0%
!! AACTTTTCAAGCAGCTCCTA+TGG - Chr4:27109400-27109419 None:intergenic 40.0%
!! AATTTGCTGGGTGAATTTGC+CGG + Chr4:27107883-27107902 MsG0480019785.01.T01:CDS 40.0%
!! ACTATGCCACTGATTTGATG+GGG - Chr4:27113586-27113605 None:intergenic 40.0%
!! ATTTTGGGAGGCTAAATTGG+AGG + Chr4:27108539-27108558 MsG0480019785.01.T01:intron 40.0%
!! TAGCACATTAGCTTTCATCG+TGG - Chr4:27111998-27112017 None:intergenic 40.0%
!!! AGTTGGTTTTAGTGGCTTTG+GGG + Chr4:27110042-27110061 MsG0480019785.01.T01:intron 40.0%
!!! CAGTTGGTTTTAGTGGCTTT+GGG + Chr4:27110041-27110060 MsG0480019785.01.T01:intron 40.0%
!!! CATTCTGTGTGTCGACTTTT+TGG + Chr4:27109490-27109509 MsG0480019785.01.T01:intron 40.0%
!!! TGATCGGTGGTTTTATGAAC+AGG + Chr4:27109235-27109254 MsG0480019785.01.T01:intron 40.0%
!!! TTAGTTTTGATGAGCCACCA+TGG + Chr4:27111214-27111233 MsG0480019785.01.T01:intron 40.0%
AAATCCAGCCCATTTGACGA+AGG + Chr4:27113797-27113816 MsG0480019785.01.T01:CDS 45.0%
AAATGAAGATGGAGAGGCAG+AGG - Chr4:27112264-27112283 None:intergenic 45.0%
AACCTTCCATGCTGTGCTAT+TGG + Chr4:27110013-27110032 MsG0480019785.01.T01:intron 45.0%
AATCCAGCCCATTTGACGAA+GGG + Chr4:27113798-27113817 MsG0480019785.01.T01:CDS 45.0%
AATGGTGACCTGTGCATTAC+AGG - Chr4:27115499-27115518 None:intergenic 45.0%
ACAGGGGCAATCCAATGTAA+AGG + Chr4:27109286-27109305 MsG0480019785.01.T01:CDS 45.0%
ACATGTTTGTCCAGGCACAA+GGG + Chr4:27115049-27115068 MsG0480019785.01.T01:intron 45.0%
ACCGGTACCTTCAAACAAAC+AGG - Chr4:27111348-27111367 None:intergenic 45.0%
ACGGCGAAATTGTGATGTGA+TGG + Chr4:27108257-27108276 MsG0480019785.01.T01:intron 45.0%
AGAGGAGAAGACCACAATCA+AGG + Chr4:27114399-27114418 MsG0480019785.01.T01:CDS 45.0%
AGATGATACTGCAGTACTGC+TGG - Chr4:27111150-27111169 None:intergenic 45.0%
AGCGCTAAATGAAGATGGAG+AGG - Chr4:27112270-27112289 None:intergenic 45.0%
AGGATGCTGTTCAAGAGCTT+TGG + Chr4:27112695-27112714 MsG0480019785.01.T01:CDS 45.0%
AGGCCAAAAAACCGACATAC+CGG - Chr4:27108954-27108973 None:intergenic 45.0%
AGGCTAAATTGGAGGAGAGT+TGG + Chr4:27108547-27108566 MsG0480019785.01.T01:intron 45.0%
ATCTTGGAACTCAGGAAGCA+GGG + Chr4:27115139-27115158 MsG0480019785.01.T01:CDS 45.0%
ATTTAGACTCGCGGTCCAAA+AGG - Chr4:27111527-27111546 None:intergenic 45.0%
CAAGATCTGGTTACTGCCAA+TGG + Chr4:27113381-27113400 MsG0480019785.01.T01:CDS 45.0%
CAGGGCCGTCTTCAATAATT+CGG + Chr4:27108480-27108499 MsG0480019785.01.T01:intron 45.0%
CATAAAACGATCCCAAGGGT+TGG - Chr4:27115219-27115238 None:intergenic 45.0%
CATGAACTTACTGGGATCAC+CGG - Chr4:27110492-27110511 None:intergenic 45.0%
CCAAAAACCAGCAGCAATCT+GGG - Chr4:27115317-27115336 None:intergenic 45.0%
CCAAAGCCACTAAAACCAAC+TGG - Chr4:27110043-27110062 None:intergenic 45.0%
CCGCTAACAGCAACAATTTC+CGG - Chr4:27107979-27107998 None:intergenic 45.0%
CCGTCCCTATTCTACAGTAA+TGG - Chr4:27115517-27115536 None:intergenic 45.0%
CGTGATGCTCTTCAGAGAAA+AGG + Chr4:27108054-27108073 MsG0480019785.01.T01:CDS 45.0%
CTAACAGCAACAATTTCCGG+CGG - Chr4:27107976-27107995 None:intergenic 45.0%
CTCCACATAAAACGATCCCA+AGG - Chr4:27115224-27115243 None:intergenic 45.0%
CTCTGGTAGAGGCAATATGT+CGG + Chr4:27114111-27114130 MsG0480019785.01.T01:CDS 45.0%
CTGAATGACAGCATAGACAC+CGG - Chr4:27109881-27109900 None:intergenic 45.0%
CTTGTCCTGTCAATCAGACA+GGG + Chr4:27113127-27113146 MsG0480019785.01.T01:CDS 45.0%
GAATTATTGAAGACGGCCCT+GGG - Chr4:27108481-27108500 None:intergenic 45.0%
GAGGAGAAGACCACAATCAA+GGG + Chr4:27114400-27114419 MsG0480019785.01.T01:CDS 45.0%
GAGGTTGCAGACAGTAACAA+TGG - Chr4:27110541-27110560 None:intergenic 45.0%
GATGCAGACTCTACCTTATG+AGG - Chr4:27110563-27110582 None:intergenic 45.0%
GATTTCTGCCTGTAATGCAC+AGG + Chr4:27115488-27115507 MsG0480019785.01.T01:three_prime_UTR 45.0%
GCAAAATTTGTGAAGGACGC+CGG + Chr4:27108907-27108926 MsG0480019785.01.T01:intron 45.0%
GCGAAATTGTGATGTGATGG+TGG + Chr4:27108260-27108279 MsG0480019785.01.T01:intron 45.0%
GGATTAGGTGCAACATCAAG+AGG + Chr4:27114214-27114233 MsG0480019785.01.T01:CDS 45.0%
GGCCTCCGAATTATTGAAGA+CGG - Chr4:27108488-27108507 None:intergenic 45.0%
GGCTAAATTGGAGGAGAGTT+GGG + Chr4:27108548-27108567 MsG0480019785.01.T01:intron 45.0%
GGTATAGCCCATTTGCATAG+CGG - Chr4:27108393-27108412 None:intergenic 45.0%
GTAGAGGCAATATGTCGGAT+GGG + Chr4:27114116-27114135 MsG0480019785.01.T01:CDS 45.0%
GTGAATTTGCCGGTGATTCA+CGG + Chr4:27107893-27107912 MsG0480019785.01.T01:CDS 45.0%
GTGCAACATCAAGAGGTGAA+AGG + Chr4:27114221-27114240 MsG0480019785.01.T01:CDS 45.0%
GTGTGTCAGGAAAGGAATTC+TGG + Chr4:27111769-27111788 MsG0480019785.01.T01:intron 45.0%
GTGTTGTCAAATATCGGCCA+TGG + Chr4:27108450-27108469 MsG0480019785.01.T01:intron 45.0%
GTGTTGTCAGTTGCGAATTG+CGG + Chr4:27108345-27108364 MsG0480019785.01.T01:intron 45.0%
GTTTGTCCCCATCAAATCAG+TGG + Chr4:27113577-27113596 MsG0480019785.01.T01:intron 45.0%
TAACATTCCCCACGACAAGT+AGG - Chr4:27112566-27112585 None:intergenic 45.0%
TACATGTCCTACTTGTCGTG+GGG + Chr4:27112556-27112575 MsG0480019785.01.T01:CDS 45.0%
TACATGTTTGTCCAGGCACA+AGG + Chr4:27115048-27115067 MsG0480019785.01.T01:intron 45.0%
TAGAGGCAATATGTCGGATG+GGG + Chr4:27114117-27114136 MsG0480019785.01.T01:CDS 45.0%
TAGAGGGATCTCACATCATG+CGG + Chr4:27114155-27114174 MsG0480019785.01.T01:CDS 45.0%
TATCTTGGAACTCAGGAAGC+AGG + Chr4:27115138-27115157 MsG0480019785.01.T01:CDS 45.0%
TATGCTAGGAGGCTTGAATC+TGG + Chr4:27108105-27108124 MsG0480019785.01.T01:CDS 45.0%
TATTTGGCGAAGCAGTCAGA+AGG + Chr4:27114247-27114266 MsG0480019785.01.T01:CDS 45.0%
TCACACTTAGTCCATTCCCA+GGG - Chr4:27110716-27110735 None:intergenic 45.0%
TCTCGATGAGGTGAATTTGC+TGG + Chr4:27107870-27107889 MsG0480019785.01.T01:CDS 45.0%
TCTTGTCCTGTCAATCAGAC+AGG + Chr4:27113126-27113145 MsG0480019785.01.T01:CDS 45.0%
TGCAGTTCAGAAAAGGGCTT+CGG - Chr4:27115397-27115416 None:intergenic 45.0%
TTCAACTTCACCTCTGGTAG+AGG + Chr4:27114100-27114119 MsG0480019785.01.T01:CDS 45.0%
TTGTCGTGGGGAATGTTATC+AGG + Chr4:27112568-27112587 MsG0480019785.01.T01:CDS 45.0%
! ACCCTTGGGATCGTTTTATG+TGG + Chr4:27115219-27115238 MsG0480019785.01.T01:three_prime_UTR 45.0%
! ACCTTCCATGCTGTGCTATT+GGG + Chr4:27110014-27110033 MsG0480019785.01.T01:intron 45.0%
! AGCATCACGCTTAGCTTTCA+TGG - Chr4:27108043-27108062 None:intergenic 45.0%
! ATGCTGTTCAAGAGCTTTGG+AGG + Chr4:27112698-27112717 MsG0480019785.01.T01:CDS 45.0%
! CCGGAAATTGTTGCTGTTAG+CGG + Chr4:27107976-27107995 MsG0480019785.01.T01:CDS 45.0%
! CTCGATGAGGTGAATTTGCT+GGG + Chr4:27107871-27107890 MsG0480019785.01.T01:CDS 45.0%
! CTGGCTGATCACACTGTTTT+TGG + Chr4:27111788-27111807 MsG0480019785.01.T01:CDS 45.0%
! GAAATTGTTGCTGTTAGCGG+TGG + Chr4:27107979-27107998 MsG0480019785.01.T01:CDS 45.0%
! GACGAAGGATTTTCTCGATG+AGG + Chr4:27107858-27107877 MsG0480019785.01.T01:CDS 45.0%
! GGTGAAGTTGGTCCTTTAGA+GGG + Chr4:27114139-27114158 MsG0480019785.01.T01:CDS 45.0%
! GTGCTTCATTTAGGTGCCAT+TGG + Chr4:27110148-27110167 MsG0480019785.01.T01:intron 45.0%
! TCAGGAAGTAGGGTTGATTC+AGG + Chr4:27113998-27114017 MsG0480019785.01.T01:intron 45.0%
! TCTGACATTGGTCTAGTGGT+TGG - Chr4:27108703-27108722 None:intergenic 45.0%
! TGTGCTATTGGGAAACCAGT+TGG + Chr4:27110025-27110044 MsG0480019785.01.T01:intron 45.0%
!! GCTTTTTGCATTGGCGATTG+TGG + Chr4:27112049-27112068 MsG0480019785.01.T01:intron 45.0%
!! TGGTGGAACGATTCAAGTTG+CGG + Chr4:27107927-27107946 MsG0480019785.01.T01:CDS 45.0%
!! TTTAGCTTGAGAAACGGGGT+GGG + Chr4:27113456-27113475 MsG0480019785.01.T01:CDS 45.0%
!!! AGACCGGTATGTCGGTTTTT+TGG + Chr4:27108948-27108967 MsG0480019785.01.T01:intron 45.0%
!!! CCAGATTGCTGCTGGTTTTT+GGG + Chr4:27115315-27115334 MsG0480019785.01.T01:three_prime_UTR 45.0%
!!! CCAGTTGGTTTTAGTGGCTT+TGG + Chr4:27110040-27110059 MsG0480019785.01.T01:intron 45.0%
!!! GATGCACGCCATAGTTTTGA+AGG + Chr4:27112991-27113010 MsG0480019785.01.T01:CDS 45.0%
!!! GGGAAACCAGTTGGTTTTAG+TGG + Chr4:27110034-27110053 MsG0480019785.01.T01:intron 45.0%
!!! GTTGGTTTTAGTGGCTTTGG+GGG + Chr4:27110043-27110062 MsG0480019785.01.T01:intron 45.0%
!!! TTTTAGCTTGAGAAACGGGG+TGG + Chr4:27113455-27113474 MsG0480019785.01.T01:CDS 45.0%
!! ATATATATATATATATATGT+TGG - Chr4:27110196-27110215 None:intergenic 5.0%
!!! GAAAAATAATAATATTATTT+TGG + Chr4:27108523-27108542 MsG0480019785.01.T01:intron 5.0%
AAAACCAGCAGCAATCTGGG+CGG - Chr4:27115314-27115333 None:intergenic 50.0%
AATATGGAGGCCCTATGCCA+TGG + Chr4:27108807-27108826 MsG0480019785.01.T01:intron 50.0%
ACAATTTCGCCGTTGCACAG+AGG - Chr4:27108250-27108269 None:intergenic 50.0%
AGAGGCAATATGTCGGATGG+GGG + Chr4:27114118-27114137 MsG0480019785.01.T01:CDS 50.0%
AGAGGGATCTCACATCATGC+GGG + Chr4:27114156-27114175 MsG0480019785.01.T01:CDS 50.0%
ATATGGAGGCCCTATGCCAT+GGG + Chr4:27108808-27108827 MsG0480019785.01.T01:intron 50.0%
ATCTAGGCTTGCAGAAGGAC+CGG + Chr4:27110470-27110489 MsG0480019785.01.T01:CDS 50.0%
ATGAGACGTTACCTAGGTCG+TGG - Chr4:27112231-27112250 None:intergenic 50.0%
ATTTGCCGGTGATTCACGGA+AGG + Chr4:27107897-27107916 MsG0480019785.01.T01:CDS 50.0%
ATTTGGGCCCTCGAATATGG+AGG + Chr4:27108794-27108813 MsG0480019785.01.T01:intron 50.0%
CATAGGGCCTCCATATTCGA+GGG - Chr4:27108804-27108823 None:intergenic 50.0%
CCATCTGTAGACCGGTATGT+CGG + Chr4:27108940-27108959 MsG0480019785.01.T01:intron 50.0%
CCCAAAAACCAGCAGCAATC+TGG - Chr4:27115318-27115337 None:intergenic 50.0%
CCTCACAAATTCGGCAAGCA+CGG - Chr4:27109547-27109566 None:intergenic 50.0%
CGAATTATTGAAGACGGCCC+TGG - Chr4:27108482-27108501 None:intergenic 50.0%
CGACATATTGCCTCTACCAG+AGG - Chr4:27114113-27114132 None:intergenic 50.0%
CGGGGAAAACGTAGTACTCA+TGG + Chr4:27114175-27114194 MsG0480019785.01.T01:CDS 50.0%
CTCACACTTAGTCCATTCCC+AGG - Chr4:27110717-27110736 None:intergenic 50.0%
CTGTCTGCAACCTCCTCATA+AGG + Chr4:27110547-27110566 MsG0480019785.01.T01:CDS 50.0%
CTGTGATCATTGCCAACGCT+GGG + Chr4:27111858-27111877 MsG0480019785.01.T01:CDS 50.0%
GAGGTGACTGGTGTAGTTGA+AGG + Chr4:27115073-27115092 MsG0480019785.01.T01:CDS 50.0%
GATTCACGGAAGGGAGAAGA+TGG + Chr4:27107907-27107926 MsG0480019785.01.T01:CDS 50.0%
GCAGACTCTACCTTATGAGG+AGG - Chr4:27110560-27110579 None:intergenic 50.0%
GCCAGAGGTCAAAAAGGAAG+AGG + Chr4:27114422-27114441 MsG0480019785.01.T01:CDS 50.0%
GCTTCATCTAGGCTTGCAGA+AGG + Chr4:27110465-27110484 MsG0480019785.01.T01:CDS 50.0%
GCTTGAATCTGGCGATGTTG+TGG + Chr4:27108116-27108135 MsG0480019785.01.T01:CDS 50.0%
GGCCGTCTTCAATAATTCGG+AGG + Chr4:27108483-27108502 MsG0480019785.01.T01:intron 50.0%
GGTAGAGGCAATATGTCGGA+TGG + Chr4:27114115-27114134 MsG0480019785.01.T01:CDS 50.0%
GGTGAAGAGAGTGGAAAACG+TGG + Chr4:27113249-27113268 MsG0480019785.01.T01:CDS 50.0%
GGTTTCCCAATAGCACAGCA+TGG - Chr4:27110022-27110041 None:intergenic 50.0%
GTGTGTTTCGGGCACAGATA+GGG - Chr4:27110666-27110685 None:intergenic 50.0%
GTTCAGAAAAGGGCTTCGGT+AGG - Chr4:27115393-27115412 None:intergenic 50.0%
TACACGTGCTGTGATGCATG+TGG + Chr4:27111294-27111313 MsG0480019785.01.T01:CDS 50.0%
TACCTAGGTCGTGGGGTTTA+GGG - Chr4:27112222-27112241 None:intergenic 50.0%
TAGTCCATTCCCAGGGACAT+TGG - Chr4:27110709-27110728 None:intergenic 50.0%
TCAAGGGCCAGAGGTCAAAA+AGG + Chr4:27114416-27114435 MsG0480019785.01.T01:CDS 50.0%
TCCCAATAGCACAGCATGGA+AGG - Chr4:27110018-27110037 None:intergenic 50.0%
TGACTCAAGCTTCCAGTAGC+AGG - Chr4:27113096-27113115 None:intergenic 50.0%
TGAGACGTTACCTAGGTCGT+GGG - Chr4:27112230-27112249 None:intergenic 50.0%
TGCAATCGTGTCGAGAACGA+AGG + Chr4:27109323-27109342 MsG0480019785.01.T01:CDS 50.0%
TGCTGCTATGATTGCTGCTG+AGG + Chr4:27108080-27108099 MsG0480019785.01.T01:CDS 50.0%
TGTGTGTTTCGGGCACAGAT+AGG - Chr4:27110667-27110686 None:intergenic 50.0%
TTACCTAGGTCGTGGGGTTT+AGG - Chr4:27112223-27112242 None:intergenic 50.0%
TTCGTTCCGTTCAGAGAACG+CGG - Chr4:27107832-27107851 None:intergenic 50.0%
TTCTCCCTTCCGTGAATCAC+CGG - Chr4:27107905-27107924 None:intergenic 50.0%
TTTCCCTTCGTCAAATGGGC+TGG - Chr4:27113804-27113823 None:intergenic 50.0%
TTTGCCGGTGATTCACGGAA+GGG + Chr4:27107898-27107917 MsG0480019785.01.T01:CDS 50.0%
! ATCTGCACCGATATCTGCTG+TGG - Chr4:27108870-27108889 None:intergenic 50.0%
! ATTGTTGCTGTTAGCGGTGG+TGG + Chr4:27107982-27108001 MsG0480019785.01.T01:CDS 50.0%
! GAAGCCCTTTTCTGAACTGC+AGG + Chr4:27115396-27115415 MsG0480019785.01.T01:three_prime_UTR 50.0%
! GAAGGTGCAAGTCAATCTCC+TGG + Chr4:27114517-27114536 MsG0480019785.01.T01:CDS 50.0%
! GCCTCTTCCTTTTTGACCTC+TGG - Chr4:27114426-27114445 None:intergenic 50.0%
! GGGTGAAGTTGGTCCTTTAG+AGG + Chr4:27114138-27114157 MsG0480019785.01.T01:CDS 50.0%
! TGGATGCTCTTGCTTTAGGC+CGG + Chr4:27108833-27108852 MsG0480019785.01.T01:intron 50.0%
! TTGCTGCTGAGGAGTATGCT+AGG + Chr4:27108091-27108110 MsG0480019785.01.T01:CDS 50.0%
!! ATGCAAATGGGCTATACCGC+CGG + Chr4:27108395-27108414 MsG0480019785.01.T01:intron 50.0%
!! CTGGGAATGGACTAAGTGTG+AGG + Chr4:27110715-27110734 MsG0480019785.01.T01:intron 50.0%
!!! CCCAGATTGCTGCTGGTTTT+TGG + Chr4:27115314-27115333 MsG0480019785.01.T01:three_prime_UTR 50.0%
!!! GACTCCGAGGGTTTTGGAAA+TGG + Chr4:27111007-27111026 MsG0480019785.01.T01:intron 50.0%
AATAGGGACGGATGTGCCCT+AGG + Chr4:27115526-27115545 MsG0480019785.01.T01:three_prime_UTR 55.0%
ACAAATTCGGCAAGCACGGC+AGG - Chr4:27109543-27109562 None:intergenic 55.0%
ACAGCAACAATTTCCGGCGG+CGG - Chr4:27107973-27107992 None:intergenic 55.0%
ACCTAGGTCGTGGGGTTTAG+GGG - Chr4:27112221-27112240 None:intergenic 55.0%
AGACCACAATCAAGGGCCAG+AGG + Chr4:27114407-27114426 MsG0480019785.01.T01:CDS 55.0%
AGTTGCGCATCCAATGTCCC+TGG + Chr4:27110696-27110715 MsG0480019785.01.T01:intron 55.0%
ATGCTGAGTGGGTGACGAGA+TGG + Chr4:27112183-27112202 MsG0480019785.01.T01:intron 55.0%
ATGTCGGATGGGGGTGAAGT+TGG + Chr4:27114127-27114146 MsG0480019785.01.T01:CDS 55.0%
CCGACATACCGGTCTACAGA+TGG - Chr4:27108943-27108962 None:intergenic 55.0%
CCGTGCTTGCCGAATTTGTG+AGG + Chr4:27109544-27109563 MsG0480019785.01.T01:intron 55.0%
GAGACGTTACCTAGGTCGTG+GGG - Chr4:27112229-27112248 None:intergenic 55.0%
GAGGGATCTCACATCATGCG+GGG + Chr4:27114157-27114176 MsG0480019785.01.T01:CDS 55.0%
GATAGACACGATGGAGCAGC+TGG + Chr4:27113837-27113856 MsG0480019785.01.T01:CDS 55.0%
GCATAGGGCCTCCATATTCG+AGG - Chr4:27108805-27108824 None:intergenic 55.0%
GCATCCAATGTCCCTGGGAA+TGG + Chr4:27110702-27110721 MsG0480019785.01.T01:intron 55.0%
GCTGTGATCATTGCCAACGC+TGG + Chr4:27111857-27111876 MsG0480019785.01.T01:CDS 55.0%
GGCCTGGATGCTCTTGCTTT+AGG + Chr4:27108829-27108848 MsG0480019785.01.T01:intron 55.0%
GGGTTTCCGCGTTCTCTGAA+CGG + Chr4:27107823-27107842 MsG0480019785.01.T01:CDS 55.0%
GGTGACTGCATCAACGCCAA+TGG - Chr4:27110167-27110186 None:intergenic 55.0%
GTGGTTGGAGAACGACCAGT+AGG - Chr4:27108688-27108707 None:intergenic 55.0%
GTTGCGCATCCAATGTCCCT+GGG + Chr4:27110697-27110716 MsG0480019785.01.T01:intron 55.0%
TCACGGAAGGGAGAAGATGG+TGG + Chr4:27107910-27107929 MsG0480019785.01.T01:CDS 55.0%
TGAAGATGGAGAGGCAGAGG+CGG - Chr4:27112261-27112280 None:intergenic 55.0%
TGACCTCTGGCCCTTGATTG+TGG - Chr4:27114413-27114432 None:intergenic 55.0%
TGCTGAGTGGGTGACGAGAT+GGG + Chr4:27112184-27112203 MsG0480019785.01.T01:intron 55.0%
TGGACCGCGAGTCTAAATGC+AGG + Chr4:27111529-27111548 MsG0480019785.01.T01:intron 55.0%
TTGACCAGGGTTCAACACCC+AGG - Chr4:27108661-27108680 None:intergenic 55.0%
TTTACTGCCTGCGACTCCGA+GGG + Chr4:27110995-27111014 MsG0480019785.01.T01:intron 55.0%
TTTGTCCAGGCACAAGGGAG+AGG + Chr4:27115054-27115073 MsG0480019785.01.T01:intron 55.0%
! ACCAGTAGGTGCGTTGACCA+GGG - Chr4:27108674-27108693 None:intergenic 55.0%
! CTGCTGAGGAGTATGCTAGG+AGG + Chr4:27108094-27108113 MsG0480019785.01.T01:CDS 55.0%
! TCAAGTTGCGGTGCCGAAAG+TGG + Chr4:27107939-27107958 MsG0480019785.01.T01:CDS 55.0%
!! ACTTCCTGGGTGTTGAACCC+TGG + Chr4:27108654-27108673 MsG0480019785.01.T01:intron 55.0%
!! ATGTTGTCGATGGCGGACCA+CGG - Chr4:27108981-27109000 None:intergenic 55.0%
!! GGCCTAAAGCAAGAGCATCC+AGG - Chr4:27108834-27108853 None:intergenic 55.0%
!!! GGTTTTTTGGCCTTTCGCCG+TGG + Chr4:27108961-27108980 MsG0480019785.01.T01:intron 55.0%
ACCCCTAAACCCCACGACCT+AGG + Chr4:27112217-27112236 MsG0480019785.01.T01:intron 60.0%
ACCCTGGTCAACGCACCTAC+TGG + Chr4:27108670-27108689 MsG0480019785.01.T01:intron 60.0%
ACTGGCAATGCACCCAGCGT+TGG - Chr4:27111873-27111892 None:intergenic 60.0%
AGCATCCAGGCCCATGGCAT+AGG - Chr4:27108821-27108840 None:intergenic 60.0%
AGGCACAAGGGAGAGGTGAC+TGG + Chr4:27115061-27115080 MsG0480019785.01.T01:intron 60.0%
AGTCACCTCTCCCTTGTGCC+TGG - Chr4:27115062-27115081 None:intergenic 60.0%
ATATCTGCTGTGGCACCGCC+AGG - Chr4:27108860-27108879 None:intergenic 60.0%
CGGAACGAAGAACGCGACGA+AGG + Chr4:27107843-27107862 MsG0480019785.01.T01:CDS 60.0%
CTTTACTGCCTGCGACTCCG+AGG + Chr4:27110994-27111013 MsG0480019785.01.T01:intron 60.0%
GCATCCAGGCCCATGGCATA+GGG - Chr4:27108820-27108839 None:intergenic 60.0%
GCTGAGTGGGTGACGAGATG+GGG + Chr4:27112185-27112204 MsG0480019785.01.T01:intron 60.0%
TACAGATGGCGCCGTGACAC+CGG - Chr4:27108929-27108948 None:intergenic 60.0%
TATCTGCTGTGGCACCGCCA+GGG - Chr4:27108859-27108878 None:intergenic 60.0%
TCACGGCGCCATCTGTAGAC+CGG + Chr4:27108932-27108951 MsG0480019785.01.T01:intron 60.0%
TCCAAAACCCTCGGAGTCGC+AGG - Chr4:27111005-27111024 None:intergenic 60.0%
TTAGCCGCCCAGATTGCTGC+TGG + Chr4:27115307-27115326 MsG0480019785.01.T01:three_prime_UTR 60.0%
TTTCGGGCACAGATAGGGCC+CGG - Chr4:27110661-27110680 None:intergenic 60.0%
! GACCAGTAGGTGCGTTGACC+AGG - Chr4:27108675-27108694 None:intergenic 60.0%
! GTTGCTGTTAGCGGTGGTGG+TGG + Chr4:27107985-27108004 MsG0480019785.01.T01:CDS 60.0%
! TGTGAAGGACGCCGGTGTCA+CGG + Chr4:27108915-27108934 MsG0480019785.01.T01:intron 60.0%
!! AGCAAGAGCATCCAGGCCCA+TGG - Chr4:27108827-27108846 None:intergenic 60.0%
!! GGCGGTGCCACAGCAGATAT+CGG + Chr4:27108860-27108879 MsG0480019785.01.T01:intron 60.0%
!! TGGTGGTGGTGGTGGTGATG+TGG + Chr4:27108002-27108021 MsG0480019785.01.T01:CDS 60.0%
ACCAGCTGCAGCCCTCAAGC+TGG - Chr4:27112755-27112774 None:intergenic 65.0%
ACCAGCTTGAGGGCTGCAGC+TGG + Chr4:27112751-27112770 MsG0480019785.01.T01:CDS 65.0%
ATCGGCCATGGCAGTGCCCA+GGG + Chr4:27108462-27108481 MsG0480019785.01.T01:intron 65.0%
GCAACAATTTCCGGCGGCGG+CGG - Chr4:27107970-27107989 None:intergenic 65.0%
TATCGGCCATGGCAGTGCCC+AGG + Chr4:27108461-27108480 MsG0480019785.01.T01:intron 65.0%
! CTCTTGCTTTAGGCCGGCCC+TGG + Chr4:27108839-27108858 MsG0480019785.01.T01:intron 65.0%
! GCCTGCGACTCCGAGGGTTT+TGG + Chr4:27111001-27111020 MsG0480019785.01.T01:intron 65.0%
! TTGCTTTAGGCCGGCCCTGG+CGG + Chr4:27108842-27108861 MsG0480019785.01.T01:intron 65.0%
!! GCTGTTAGCGGTGGTGGTGG+TGG + Chr4:27107988-27108007 MsG0480019785.01.T01:CDS 65.0%
!! GTTAGCGGTGGTGGTGGTGG+TGG + Chr4:27107991-27108010 MsG0480019785.01.T01:CDS 65.0%
ACAATTTCCGGCGGCGGCGG+TGG - Chr4:27107967-27107986 None:intergenic 70.0%
GAGGCCCTATGCCATGGGCC+TGG + Chr4:27108813-27108832 MsG0480019785.01.T01:intron 70.0%
GGCGGCGGTGGCACCACTTT+CGG - Chr4:27107955-27107974 None:intergenic 70.0%
!! AGCGGTGGTGGTGGTGGTGG+TGG + Chr4:27107994-27108013 MsG0480019785.01.T01:CDS 70.0%
!! CGATGGCGGACCACGGCGAA+AGG - Chr4:27108974-27108993 None:intergenic 70.0%
TGCTGTGGCACCGCCAGGGC+CGG - Chr4:27108855-27108874 None:intergenic 75.0%
! GACGGCCCTGGGCACTGCCA+TGG - Chr4:27108470-27108489 None:intergenic 75.0%
!!! AGTGGTGCCACCGCCGCCGC+CGG + Chr4:27107957-27107976 MsG0480019785.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 27107619 27115693 27107619 ID=MsG0480019785.01;Name=MsG0480019785.01
Chr4 mRNA 27107619 27115693 27107619 ID=MsG0480019785.01.T01;Parent=MsG0480019785.01;Name=MsG0480019785.01.T01;_AED=0.40;_eAED=0.48;_QI=10|0.45|0.41|1|0.36|0.33|12|489|934
Chr4 exon 27107619 27107660 27107619 ID=MsG0480019785.01.T01:exon:5760;Parent=MsG0480019785.01.T01
Chr4 exon 27107798 27108137 27107798 ID=MsG0480019785.01.T01:exon:5761;Parent=MsG0480019785.01.T01
Chr4 exon 27109257 27109347 27109257 ID=MsG0480019785.01.T01:exon:5762;Parent=MsG0480019785.01.T01
Chr4 exon 27110439 27110568 27110439 ID=MsG0480019785.01.T01:exon:5763;Parent=MsG0480019785.01.T01
Chr4 exon 27111218 27111365 27111218 ID=MsG0480019785.01.T01:exon:5764;Parent=MsG0480019785.01.T01
Chr4 exon 27111593 27111603 27111593 ID=MsG0480019785.01.T01:exon:5765;Parent=MsG0480019785.01.T01
Chr4 exon 27111778 27111909 27111778 ID=MsG0480019785.01.T01:exon:5766;Parent=MsG0480019785.01.T01
Chr4 exon 27112511 27112589 27112511 ID=MsG0480019785.01.T01:exon:5767;Parent=MsG0480019785.01.T01
Chr4 exon 27112682 27113595 27112682 ID=MsG0480019785.01.T01:exon:5768;Parent=MsG0480019785.01.T01
Chr4 exon 27113737 27113876 27113737 ID=MsG0480019785.01.T01:exon:5769;Parent=MsG0480019785.01.T01
Chr4 exon 27114002 27114647 27114002 ID=MsG0480019785.01.T01:exon:5770;Parent=MsG0480019785.01.T01
Chr4 exon 27115063 27115693 27115063 ID=MsG0480019785.01.T01:exon:5771;Parent=MsG0480019785.01.T01
Chr4 five_prime_UTR 27107619 27107628 27107619 ID=MsG0480019785.01.T01:five_prime_utr;Parent=MsG0480019785.01.T01
Chr4 CDS 27107629 27107660 27107629 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27107798 27108137 27107798 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27109257 27109347 27109257 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27110439 27110568 27110439 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27111218 27111365 27111218 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27111593 27111603 27111593 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27111778 27111909 27111778 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27112511 27112589 27112511 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27112682 27113595 27112682 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27113737 27113876 27113737 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27114002 27114647 27114002 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 CDS 27115063 27115204 27115063 ID=MsG0480019785.01.T01:cds;Parent=MsG0480019785.01.T01
Chr4 three_prime_UTR 27115205 27115693 27115205 ID=MsG0480019785.01.T01:three_prime_utr;Parent=MsG0480019785.01.T01
Gene Sequence

>MsG0480019785.01.T01

ATGGCATTTCACGTTGCTTGTCCAATTACATGTCGAAGAATTTGTTTCTGTTCGTTAGGGTTTCCGCGTTCTCTGAACGGAACGAAGAACGCGACGAAGGATTTTCTCGATGAGGTGAATTTGCTGGGTGAATTTGCCGGTGATTCACGGAAGGGAGAAGATGGTGGAACGATTCAAGTTGCGGTGCCGAAAGTGGTGCCACCGCCGCCGCCGGAAATTGTTGCTGTTAGCGGTGGTGGTGGTGGTGGTGGTGATGTGGCTGATGAATCTGCATCCATGAAAGCTAAGCGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAGGCTTGAATCTGGCGATGTTGTGGATACATCGGGCAATCTTAATGGAGAAGAACAGGGGCAATCCAATGTAAAGGTCTTTTGTCGAATGTGCAATCGTGTCGAGAACGAAGGAAAGTACTGTTTGGCTTATGTTTTGTTTGCTTCATCTAGGCTTGCAGAAGGACCGGTGATCCCAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCTTACCATTGTTACTGTCTGCAACCTCCTCATAAGTTTTGATGAGCCACCATGGCAGTTAATTCTTTCTCACGATCTCACTTTTATTGAAATTCATAGGTGGTTTCTAGGATACACGTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAATTACTGTCCTGTTTGTTTGAAGGTACCGAAGTATGACAGGAAAGGAATTCTGGCTGATCACACTGTTTTTGGCTTATTTTGTAGGTTTACAGAGATTCAGAGTCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTGCATTGCCAGTGTGATGATATTAGGTTATGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCCGTATACATGTCCTACTTGTCGTGGGGAATGTTATCAGGTCAAGAATCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAATGTTGCTGATAAAGAGTTAATTACCAGCTTGAGGGCTGCAGCTGGTTTACCAACACAAGAAGAAATATTTTCCATTTCACCATATTCTGACGATGAGGATAGTGGGCCTTTGAAGTTAAAGAATGATTCTTCACGTTTTAAGCTCTCTTTTAAGAATTTTCCCAATAATTCACCTACCAAGATGAATGATTATGGAAAGAAATCTTCGAACAAAAAGACTGCTAAGAAAAAGGACTCTCTGTCATTAAAGACGGGTAAAATTGATGCACGCCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACGTAGCTTGGATGATATGCAATCTCAGAGAAATGAAGGTCCTGATATTTATTCATCACCTGCTACTGGAAGCTTGAGTCAAACTGAAGTCTCTTGTCCTGTCAATCAGACAGGGATTTTGAAACGTAAGTTTAATGATGAGGTGATGGTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCAAATATTTTGGATGGTGAAGAGAGTGGAAAACGTGGTGATAAGTCTCAGAATGTGAAAAAGAATAAGTTGGTTATAAATTTGGGAGCGCGGAAAATTAACGTAGCTAGTTCTCCGCTGTCTGATAATGCTAGCTTTCAAAGAGATCAAGATCTGGTTACTGCCAATGGTATACGTCTACATGAAGTTTCATTCATTTATTTGTTTACTATGTCGCCATATTTTAGCTTGAGAAACGGGGTGGGTTATTTGTTTCCTACGTCGCCATATTTTAGCTTGAGAAACGGGGTGGGATTTGATTTTGTGAAAATGAGTTACAACTATTTTTCAGTTAATATCGCTTGTTTGTCCCCATCAAATCACTTTTTTCTACTCTCTCTCTTTTTTGTGACCTTTTCCTGTTCAAATTTATCAGGAAATGAAAATCCAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGGAGCAGCTGGACATATTGATGTTAAAGGAAGTAGGGTTGATTCAGGCCAATCAAAACATTTAAAGGTTTACGGAAGAGAAGGAAACACAATCAAGTTCGGGAAAGTAAAGCCAAGTGTTTCTGAATTCAACTTCACCTCTGGTAGAGGCAATATGTCGGATGGGGGTGAAGTTGGTCCTTTAGAGGGATCTCACATCATGCGGGGAAAACGTAGTACTCATGGAATGATCAACCAAGTTGGATTAGGTGCAACATCAAGAGGTGAAAGGACATATTTGGCGAAGCAGTCAGAAGGTAGCTCTGATGTATATGATGAGGCACATGACCATAATCACATGCCTTCACATTCTTTGCCAAAAGATTCTAAACCTTCACTGAGAATTAAAATCAAAAAGCGTATCGAAAGTCAAAATTCTCATCAGGAAGAGGAGAAGACCACAATCAAGGGCCAGAGGTCAAAAAGGAAGAGGCCTTCACCTTTTAAAGAAAGATCATTGTTTAATGACTCTGAAGGTAAAGAAAGATCATTGGTTAATGACTCTGAAGGTGCAAGTCAATCTCCTGGAGAGAATATAAATCATGAGAACATGGATGCAAACTGGATTTTGATGAAATTGGGAAGTGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACATCCGATGATTCTTGGCACAAGGGAGAGGTGACTGGTGTAGTTGAAGGCACCTCAAATCTACATGTTACTTACGATGATGGAAAAGTGAGTATCTTGGAACTCAGGAAGCAGGGAGTTCGTTTTGTTCCTCAAAAGCAAAAGAGATCGAAAACATGA
Protein sequence

>MsG0480019785.01.T01

MAFHVACPITCRRICFCSLGFPRSLNGTKNATKDFLDEVNLLGEFAGDSRKGEDGGTIQVAVPKVVPPPPPEIVAVSGGGGGGGDVADESASMKAKRDALQRKGAAAMIAAEEYARRLESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGKYCLAYVLFASSRLAEGPVIPVSSCSAKDVMVLTIVTVCNLLISFDEPPWQLILSHDLTFIEIHRWFLGYTCCDACGRLFVKGNYCPVCLKVPKYDRKGILADHTVFGLFCRFTEIQSQHQWFAVIIANAGCIASVMILGYDERYHQFQVDGNLPYTCPTCRGECYQVKNLEDAVQELWRRKNVADKELITSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKNDSSRFKLSFKNFPNNSPTKMNDYGKKSSNKKTAKKKDSLSLKTGKIDARHSFEGHSDIRSLRSLDDMQSQRNEGPDIYSSPATGSLSQTEVSCPVNQTGILKRKFNDEVMVSDEERKPRVVRIKSNKANILDGEESGKRGDKSQNVKKNKLVINLGARKINVASSPLSDNASFQRDQDLVTANGIRLHEVSFIYLFTMSPYFSLRNGVGYLFPTSPYFSLRNGVGFDFVKMSYNYFSVNIACLSPSNHFFLLSLFFVTFSCSNLSGNENPAHLTKGNKFALDRHDGAAGHIDVKGSRVDSGQSKHLKVYGREGNTIKFGKVKPSVSEFNFTSGRGNMSDGGEVGPLEGSHIMRGKRSTHGMINQVGLGATSRGERTYLAKQSEGSSDVYDEAHDHNHMPSHSLPKDSKPSLRIKIKKRIESQNSHQEEEKTTIKGQRSKRKRPSPFKERSLFNDSEGKERSLVNDSEGASQSPGENINHENMDANWILMKLGSDAIGKRVEVHQTSDDSWHKGEVTGVVEGTSNLHVTYDDGKVSILELRKQGVRFVPQKQKRSKT*