AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020704.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020704.01.T01 MTR_4g057200 98.099 263 5 0 1 263 225 487 0.0 558
MsG0480020704.01.T01 MTR_4g057210 97.945 146 3 0 269 414 47 192 2.25e-95 284
MsG0480020704.01.T01 MTR_8g085840 31.000 300 162 13 9 285 221 498 9.93e-34 132
MsG0480020704.01.T01 MTR_8g085790 30.333 300 163 13 9 285 197 473 7.67e-33 130
MsG0480020704.01.T01 MTR_8g085820 30.667 300 159 12 9 291 197 464 8.73e-32 127
MsG0480020704.01.T01 MTR_3g105820 26.829 287 158 11 4 257 224 491 9.19e-20 91.7
MsG0480020704.01.T01 MTR_8g085790 32.222 180 92 7 9 172 221 386 1.38e-16 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020704.01.T01 AT3G44880 79.699 266 51 2 2 264 218 483 4.03e-162 467
MsG0480020704.01.T01 AT3G44890 69.942 173 50 1 242 414 27 197 9.17e-70 219
MsG0480020704.01.T01 AT4G25650 30.182 275 136 11 9 254 221 468 1.64e-27 114
MsG0480020704.01.T01 AT4G25650 28.188 298 135 12 9 254 221 491 9.63e-25 106
MsG0480020704.01.T01 AT2G24820 24.825 286 166 10 4 257 210 478 1.72e-18 87.8

Find 134 sgRNAs with CRISPR-Local

Find 525 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCAACTTGCTCAAATTT+TGG 0.185092 4:+46650908 MsG0480020704.01.T01:CDS
ATAACATGGTGCAATAAATT+TGG 0.238122 4:-46645342 None:intergenic
CTGCTCTTGCCGAACCATTC+AGG 0.272155 4:-46646351 None:intergenic
CCGTGAGCTGGAAGAAATTT+CGG 0.273333 4:-46645820 None:intergenic
ATATCCATATTACCCATTTC+TGG 0.295421 4:-46645742 None:intergenic
CCATATGCTAAATGCACAAT+TGG 0.305975 4:+46652421 MsG0480020704.01.T01:three_prime_UTR
ATTTCCACTCCATAGGTTAC+AGG 0.323502 4:+46645224 MsG0480020704.01.T01:intron
CCAATTGTGCATTTAGCATA+TGG 0.332898 4:-46652421 None:intergenic
CTCAGATGTGTGGGCATTGT+TGG 0.333587 4:+46652595 MsG0480020704.01.T01:three_prime_UTR
TTCTTCCAGCTCACGGTGCC+AGG 0.334083 4:+46645827 MsG0480020704.01.T01:CDS
CCGTGGTTGGTGACCAGAAA+TGG 0.334810 4:+46645729 MsG0480020704.01.T01:CDS
CGTGAGCTGGAAGAAATTTC+GGG 0.348878 4:-46645819 None:intergenic
GTGACCAGAAATGGGTAATA+TGG 0.353988 4:+46645738 MsG0480020704.01.T01:CDS
CTTCCTGAGATCAGGGAAAC+AGG 0.355646 4:+46652304 MsG0480020704.01.T01:CDS
GTTAATGTCACCGCCATTCT+CGG 0.368858 4:-46646235 None:intergenic
TTCACTTTAGCTGTGACCTC+AGG 0.373192 4:-46652355 None:intergenic
TTGTGTTGGCATTTAGAAAT+TGG 0.374763 4:+46646304 MsG0480020704.01.T01:CDS
TTGTTGAACTTCCTGAGATC+AGG 0.375491 4:+46652296 MsG0480020704.01.T01:CDS
AGACGACGAGGGAATCTTAA+TGG 0.376768 4:+46652565 MsG0480020704.01.T01:three_prime_UTR
GTCACCAACCACGGGGAGTT+TGG 0.380037 4:-46645720 None:intergenic
TAAGGCGTTGTTGTTGTTGT+TGG 0.400943 4:-46646586 None:intergenic
TTGGTTTCTGTTTAGTGTTA+CGG 0.401001 4:+46651056 MsG0480020704.01.T01:intron
GTGAAATTAGATTATATTGA+AGG 0.401514 4:+46649712 MsG0480020704.01.T01:intron
GGAATCAGTTGGGGCTTTCA+AGG 0.402616 4:+46650929 MsG0480020704.01.T01:CDS
AGATGGATTCACGTGGTTCA+TGG 0.404907 4:+46645279 MsG0480020704.01.T01:CDS
TCACGGTGCCAGGGCCTGCC+TGG 0.405008 4:+46645837 MsG0480020704.01.T01:CDS
CAGGCCCTGGCACCGTGAGC+TGG 0.407256 4:-46645832 None:intergenic
AAGGAAGATATTGTTGATGT+TGG 0.414771 4:+46649731 MsG0480020704.01.T01:CDS
ACTTGCCACCAGGCAGGCCC+TGG 0.430231 4:-46645845 None:intergenic
TCGTCGTCTCGTCCGAGCCA+TGG 0.436417 4:-46652551 None:intergenic
AGCTTGTAAAGGAGCTTATG+AGG 0.440308 4:+46646559 MsG0480020704.01.T01:CDS
ATTGTTGATGTTGGAAAGAA+AGG 0.441220 4:+46649740 MsG0480020704.01.T01:CDS
GATGGATTCACGTGGTTCAT+GGG 0.447972 4:+46645280 MsG0480020704.01.T01:CDS
CACAGAATTGCATAAGTTGA+AGG 0.450065 4:+46652448 MsG0480020704.01.T01:three_prime_UTR
GCAATCTGAGCTTTGCCACT+TGG 0.454864 4:-46649809 None:intergenic
ATGATTCATTTCTAGGGAGG+TGG 0.456120 4:+46652264 MsG0480020704.01.T01:intron
TTCCAGGGAATTGAAGATAG+AGG 0.456687 4:+46650499 MsG0480020704.01.T01:intron
TCTCCTGTTTCCCTGATCTC+AGG 0.464623 4:-46652307 None:intergenic
GAACTTCTTGATGTCAAGGC+TGG 0.471943 4:+46649764 MsG0480020704.01.T01:CDS
GGTAAAGGAAAACAAATCTT+CGG 0.476682 4:+46650966 MsG0480020704.01.T01:CDS
CCACGTGAATCCATCTTGAA+TGG 0.476840 4:-46645272 None:intergenic
TGTCTCAGGTGGTTCCTAGA+TGG 0.480851 4:+46646130 MsG0480020704.01.T01:intron
CGTCGTCTCGTCCGAGCCAT+GGG 0.483683 4:-46652550 None:intergenic
GTTGTACTTAATGTTTATGA+TGG 0.485403 4:+46652691 MsG0480020704.01.T01:three_prime_UTR
TGTAACTATGGCCCATGGCT+CGG 0.488193 4:+46652539 MsG0480020704.01.T01:three_prime_UTR
GAAAACTGAACACACATTCA+AGG 0.494274 4:-46652655 None:intergenic
CGTGGTTGGTGACCAGAAAT+GGG 0.494565 4:+46645730 MsG0480020704.01.T01:CDS
ATGTTCACCGTCGCAAACTC+TGG 0.495962 4:-46643785 None:intergenic
CGAGTCTTACCAGGTGCCAT+GGG 0.496305 4:-46645779 None:intergenic
AACCGTACTATCAAAACGTC+AGG 0.497409 4:+46646392 MsG0480020704.01.T01:CDS
TAACCCCACTTAGTGGGATA+AGG 0.499880 4:-46646604 None:intergenic
AATGGCCAACCTGAATGGTT+CGG 0.505921 4:+46646342 MsG0480020704.01.T01:CDS
TTCAATGTCCCCATGGCACC+TGG 0.510022 4:+46645770 MsG0480020704.01.T01:CDS
TAAAGTGAAAGTGAATGTAT+TGG 0.510757 4:+46652369 MsG0480020704.01.T01:CDS
CCGAAATTTCTTCCAGCTCA+CGG 0.515590 4:+46645820 MsG0480020704.01.T01:CDS
AGATCTTGTTGACATTATCA+AGG 0.516990 4:+46651083 MsG0480020704.01.T01:CDS
GCGAGTCTTACCAGGTGCCA+TGG 0.519997 4:-46645780 None:intergenic
CATATGCTAAATGCACAATT+GGG 0.520371 4:+46652422 MsG0480020704.01.T01:three_prime_UTR
TATCATCATAACTCAAAAGA+TGG 0.520394 4:-46652478 None:intergenic
ACGGCAATGGCCAACCTGAA+TGG 0.522604 4:+46646337 MsG0480020704.01.T01:CDS
CTAAAGTGTTCAGCTTGTAA+AGG 0.524879 4:+46646548 MsG0480020704.01.T01:CDS
TGGCTGAGGCGACACGGCAA+TGG 0.525095 4:+46646324 MsG0480020704.01.T01:CDS
AGGTGCCATGGGGACATTGA+AGG 0.525388 4:-46645768 None:intergenic
GTACGGTTGAAGGCAATGGC+TGG 0.525732 4:-46646377 None:intergenic
CATCTTGAATGGAAGAGGCT+TGG 0.526200 4:-46645261 None:intergenic
TTATCAAGGCACAGCTTCAA+AGG 0.528393 4:+46651097 MsG0480020704.01.T01:CDS
GAATCCATCTTGAATGGAAG+AGG 0.529803 4:-46645266 None:intergenic
GATAGAGGAAGAAAGAATTG+AGG 0.529899 4:+46650514 MsG0480020704.01.T01:CDS
TCCCTCATAACCCCACTTAG+TGG 0.530666 4:-46646611 None:intergenic
CATTTCTGGTCACCAACCAC+GGG 0.533924 4:-46645728 None:intergenic
CTACGGCTATGATACTCTCA+TGG 0.535693 4:+46643823 MsG0480020704.01.T01:CDS
AATTGAGGCTGAGAAACAAC+GGG 0.535838 4:+46650529 MsG0480020704.01.T01:CDS
GTGAAGCGTAAAGGTGGTAA+AGG 0.535926 4:+46650951 MsG0480020704.01.T01:CDS
TGTTGAACTTCCTGAGATCA+GGG 0.538632 4:+46652297 MsG0480020704.01.T01:CDS
CGGTGCCAGGGCCTGCCTGG+TGG 0.541920 4:+46645840 MsG0480020704.01.T01:CDS
ACGATGGAGCGAGTCTTACC+AGG 0.542041 4:-46645788 None:intergenic
TTTCTCGCAGAAACCGAGAA+TGG 0.544070 4:+46646222 MsG0480020704.01.T01:CDS
GTCCAATGTTCATACCATCT+AGG 0.546736 4:-46646144 None:intergenic
GCTTTCAAGGTGAAGCGTAA+AGG 0.548080 4:+46650942 MsG0480020704.01.T01:CDS
GGTGACATGATTGTACTTCA+AGG 0.548561 4:+46646186 MsG0480020704.01.T01:CDS
TCTTCCAGCTCACGGTGCCA+GGG 0.550242 4:+46645828 MsG0480020704.01.T01:CDS
CAACGCCTTATCCCACTAAG+TGG 0.551576 4:+46646599 MsG0480020704.01.T01:CDS
CAAGCCTCTTCCATTCAAGA+TGG 0.553250 4:+46645262 MsG0480020704.01.T01:CDS
AGGTGAACTTCTTGATGTCA+AGG 0.553759 4:+46649760 MsG0480020704.01.T01:CDS
GATAGTACGGTTGAAGGCAA+TGG 0.559294 4:-46646381 None:intergenic
AGAAATTATTTGTTTCCAAG+TGG 0.559860 4:+46649794 MsG0480020704.01.T01:CDS
AATCTTACTTGCCACCAGGC+AGG 0.562524 4:-46645851 None:intergenic
ATCGGCCTGTGTTGGTGTGA+AGG 0.562936 4:-46646277 None:intergenic
ACAGGCCGATCGCTTTGTGT+TGG 0.566142 4:+46646290 MsG0480020704.01.T01:CDS
TAAATTTGGAACTGATCCGC+GGG 0.568789 4:-46645328 None:intergenic
AACGCCTTATCCCACTAAGT+GGG 0.569166 4:+46646600 MsG0480020704.01.T01:CDS
CCATTTCTGGTCACCAACCA+CGG 0.571640 4:-46645729 None:intergenic
TCACTTTAGCTGTGACCTCA+GGG 0.572805 4:-46652354 None:intergenic
TTCCTAGATGGTATGAACAT+TGG 0.578101 4:+46646142 MsG0480020704.01.T01:CDS
ACAAAGCGATCGGCCTGTGT+TGG 0.578127 4:-46646285 None:intergenic
GGACACTTTCTCAGATGTGT+GGG 0.579613 4:+46652586 MsG0480020704.01.T01:three_prime_UTR
CCCTCATAACCCCACTTAGT+GGG 0.579828 4:-46646610 None:intergenic
GCTTGTAAAGGAGCTTATGA+GGG 0.580240 4:+46646560 MsG0480020704.01.T01:CDS
TGGACACTTTCTCAGATGTG+TGG 0.584684 4:+46652585 MsG0480020704.01.T01:three_prime_UTR
ATGGATTCACGTGGTTCATG+GGG 0.586611 4:+46645281 MsG0480020704.01.T01:CDS
TGGCATTTAGAAATTGGCTG+AGG 0.593473 4:+46646310 MsG0480020704.01.T01:CDS
TCTTGCCGAACCATTCAGGT+TGG 0.593673 4:-46646347 None:intergenic
AGAAATTGGCTGAGGCGACA+CGG 0.601844 4:+46646318 MsG0480020704.01.T01:CDS
GATACCAAACTCCCCGTGGT+TGG 0.603630 4:+46645716 MsG0480020704.01.T01:CDS
AAATGCCAACACAAAGCGAT+CGG 0.604570 4:-46646295 None:intergenic
CCATTCAAGATGGATTCACG+TGG 0.609365 4:+46645272 MsG0480020704.01.T01:CDS
CCTCACCTTCACACCAACAC+AGG 0.610530 4:+46646272 MsG0480020704.01.T01:CDS
ATGTTCCTTCAATGTCCCCA+TGG 0.611264 4:+46645763 MsG0480020704.01.T01:CDS
GAATTGAGGCTGAGAAACAA+CGG 0.614015 4:+46650528 MsG0480020704.01.T01:CDS
ATAAATTTGGAACTGATCCG+CGG 0.618874 4:-46645329 None:intergenic
TGAGCAAAATCAATGTGAGA+AGG 0.619222 4:-46643860 None:intergenic
AAGGAAAACAAATCTTCGGA+AGG 0.620983 4:+46650970 MsG0480020704.01.T01:CDS
ATTTCGGGCACTGCAAACGA+TGG 0.623592 4:-46645804 None:intergenic
CCTGTGTTGGTGTGAAGGTG+AGG 0.628478 4:-46646272 None:intergenic
TAGAAATCTTACTTGCCACC+AGG 0.633598 4:-46645855 None:intergenic
ATTTCTATAGGTAAAAGAAG+AGG 0.638826 4:+46650884 MsG0480020704.01.T01:intron
ACTGAACACACATTCAAGGA+GGG 0.640106 4:-46652651 None:intergenic
TACTTGTTAATATAATAACA+TGG 0.641143 4:-46645356 None:intergenic
TTCAAGGTGAAGCGTAAAGG+TGG 0.641294 4:+46650945 MsG0480020704.01.T01:CDS
CCACTCCATAGGTTACAGGA+AGG 0.641894 4:+46645228 MsG0480020704.01.T01:intron
ATGGCTCGGACGAGACGACG+AGG 0.653083 4:+46652553 MsG0480020704.01.T01:three_prime_UTR
TGAACATTGGACTTCAAACA+AGG 0.656690 4:+46646155 MsG0480020704.01.T01:CDS
CTCGCAGAAACCGAGAATGG+CGG 0.656709 4:+46646225 MsG0480020704.01.T01:CDS
CTGAACACACATTCAAGGAG+GGG 0.659133 4:-46652650 None:intergenic
AACTGAACACACATTCAAGG+AGG 0.662166 4:-46652652 None:intergenic
ACTTCAAACAAGGTATATGA+CGG 0.664094 4:+46646165 MsG0480020704.01.T01:CDS
TGGCTCGGACGAGACGACGA+GGG 0.665860 4:+46652554 MsG0480020704.01.T01:three_prime_UTR
GAGCTAATGAAGGGAACCCG+CGG 0.685044 4:+46645312 MsG0480020704.01.T01:CDS
ACGCCTTATCCCACTAAGTG+GGG 0.685642 4:+46646601 MsG0480020704.01.T01:CDS
TGTAAAACCAGAGTTTGCGA+CGG 0.708528 4:+46643778 MsG0480020704.01.T01:CDS
GAGTCTTACCAGGTGCCATG+GGG 0.713819 4:-46645778 None:intergenic
AGAGTTAAAACTTCACCCTG+AGG 0.724481 4:+46652339 MsG0480020704.01.T01:CDS
GATCGATACCAAACTCCCCG+TGG 0.727360 4:+46645712 MsG0480020704.01.T01:CDS
ATTTCTGGTCACCAACCACG+GGG 0.751627 4:-46645727 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTCATATTATTAAGAA+AGG - Chr4:46644754-46644773 None:intergenic 10.0%
!! ATTATTTAGTATTATTTGTT+AGG + Chr4:46645174-46645193 MsG0480020704.01.T01:intron 10.0%
!! GTGATTAAATTTAAATAATT+TGG - Chr4:46644236-46644255 None:intergenic 10.0%
!!! AAATTAAAACTATTCTTTTA+TGG - Chr4:46645505-46645524 None:intergenic 10.0%
!!! GTTATTTTTTTTTTTTTTTC+TGG + Chr4:46651302-46651321 MsG0480020704.01.T01:intron 10.0%
!!! TTATTTAGTATTATTTGTTA+GGG + Chr4:46645175-46645194 MsG0480020704.01.T01:intron 10.0%
!! AAAATGTAGTTGAATAATAA+AGG + Chr4:46647866-46647885 MsG0480020704.01.T01:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + Chr4:46648353-46648372 MsG0480020704.01.T01:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - Chr4:46648372-46648353 None:intergenic 15.0%
!! AAATGTAGTTGAATAATAAA+GGG + Chr4:46647867-46647886 MsG0480020704.01.T01:intron 15.0%
!! AAATTACAAAAACTTAAGTA+AGG - Chr4:46649882-46649901 None:intergenic 15.0%
!! AATAATATTATGTAAGATGT+TGG - Chr4:46649100-46649119 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + Chr4:46648354-46648373 MsG0480020704.01.T01:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - Chr4:46648373-46648354 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + Chr4:46648162-46648181 MsG0480020704.01.T01:intron 15.0%
!! ATAAAATGTAGTTATAAAAG+TGG - Chr4:46647479-46647498 None:intergenic 15.0%
!! CAAATCACTATAATATTAAT+AGG + Chr4:46651432-46651451 MsG0480020704.01.T01:intron 15.0%
!! CTATTAATATTATAGTGATT+TGG - Chr4:46651434-46651453 None:intergenic 15.0%
!! TAAAATGTAGTTATAAAAGT+GGG - Chr4:46647478-46647497 None:intergenic 15.0%
!! TAAATTTAATCACTTAAGAT+TGG + Chr4:46644243-46644262 MsG0480020704.01.T01:intron 15.0%
!! TATTAAGATATTATTGTAAG+TGG + Chr4:46643970-46643989 MsG0480020704.01.T01:intron 15.0%
!! TGAGTGAAAATATATAAAAA+TGG - Chr4:46644071-46644090 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - Chr4:46648281-46648262 None:intergenic 15.0%
!! TTTAACTAAACATTATCATA+AGG - Chr4:46650597-46650616 None:intergenic 15.0%
!! TTTATACCTTTCTAATAATT+GGG + Chr4:46651215-46651234 MsG0480020704.01.T01:intron 15.0%
!!! AATCTTTATGTATGTTTTTT+TGG + Chr4:46647076-46647095 MsG0480020704.01.T01:intron 15.0%
!!! AATTAAGAACTATTTTTTTC+AGG + Chr4:46645684-46645703 MsG0480020704.01.T01:intron 15.0%
!!! AATTTTTAATTGAAAAAGGA+CGG + Chr4:46645520-46645539 MsG0480020704.01.T01:intron 15.0%
!!! ATAAAAATGTCATACTTTTA+TGG + Chr4:46651918-46651937 MsG0480020704.01.T01:intron 15.0%
!!! TACTTGTTAATATAATAACA+TGG - Chr4:46645359-46645378 None:intergenic 15.0%
!!! TATAAGATAACATTTTTAAG+TGG - Chr4:46643682-46643701 None:intergenic 15.0%
!!! TATTTTAAAAATATTCATCG+AGG + Chr4:46649069-46649088 MsG0480020704.01.T01:intron 15.0%
!!! TGATGGTAATATTTTTTTTT+TGG + Chr4:46652708-46652727 MsG0480020704.01.T01:three_prime_UTR 15.0%
!!! TTTTAATTTACATTAGTAGT+AGG + Chr4:46649899-46649918 MsG0480020704.01.T01:intron 15.0%
!!! TTTTCGATATAATTTATCAA+TGG + Chr4:46651401-46651420 MsG0480020704.01.T01:intron 15.0%
!! AAAAGAATCTTTCATTATTG+TGG - Chr4:46651373-46651392 None:intergenic 20.0%
!! AAAATGTAGTTATAAAAGTG+GGG - Chr4:46647477-46647496 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + Chr4:46648292-46648311 MsG0480020704.01.T01:intron 20.0%
!! AAGGCAAAATAATTTATGTT+TGG + Chr4:46647827-46647846 MsG0480020704.01.T01:intron 20.0%
!! AGAGAAATTAAACTTACATA+AGG + Chr4:46648874-46648893 MsG0480020704.01.T01:intron 20.0%
!! ATCTTATATGATAGTATTCA+AGG + Chr4:46648816-46648835 MsG0480020704.01.T01:intron 20.0%
!! CATTTAACTGATTATTTAGT+GGG + Chr4:46647712-46647731 MsG0480020704.01.T01:intron 20.0%
!! GAAATTCATCATAATGAATT+AGG - Chr4:46651728-46651747 None:intergenic 20.0%
!! GAGAAATTAAACTTACATAA+GGG + Chr4:46648875-46648894 MsG0480020704.01.T01:intron 20.0%
!! GTGAAATTAGATTATATTGA+AGG + Chr4:46649712-46649731 MsG0480020704.01.T01:intron 20.0%
!! GTTTATACCTTTCTAATAAT+TGG + Chr4:46651214-46651233 MsG0480020704.01.T01:intron 20.0%
!! TAAAAAGTGAATTCAAAATC+AGG - Chr4:46650745-46650764 None:intergenic 20.0%
!! TAAAAATCTTCCGAATAAAA+TGG - Chr4:46646022-46646041 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + Chr4:46648291-46648310 MsG0480020704.01.T01:intron 20.0%
!! TAAATCTTTGATTAGATTAG+TGG - Chr4:46647406-46647425 None:intergenic 20.0%
!! TAAATTTAGCAAATCCAAAA+GGG - Chr4:46645077-46645096 None:intergenic 20.0%
!! TAATGAATTAGGATATAAGA+TGG - Chr4:46651717-46651736 None:intergenic 20.0%
!! TATAAATTGGTATAAGATCT+TGG - Chr4:46644473-46644492 None:intergenic 20.0%
!! TATTGTGTCTTAATGATTTA+TGG + Chr4:46645037-46645056 MsG0480020704.01.T01:intron 20.0%
!! TCATTTAACTGATTATTTAG+TGG + Chr4:46647711-46647730 MsG0480020704.01.T01:intron 20.0%
!! TGTGAATTAGTAGAAAAATA+TGG + Chr4:46649126-46649145 MsG0480020704.01.T01:intron 20.0%
!! TTAGATCATTAAACCTATTA+TGG - Chr4:46643590-46643609 None:intergenic 20.0%
!! TTATTTATAAAAGAATGGTG+AGG - Chr4:46647339-46647358 None:intergenic 20.0%
!!! AAAAAAAAATCGATTGGTTT+GGG - Chr4:46649232-46649251 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + Chr4:46648197-46648216 MsG0480020704.01.T01:intron 20.0%
!!! ACCTTTTTAACAAAACAAAA+GGG + Chr4:46644266-46644285 MsG0480020704.01.T01:intron 20.0%
!!! AGAAAGAAAAAAAACTTGTT+TGG + Chr4:46650413-46650432 MsG0480020704.01.T01:intron 20.0%
!!! ATTATTAGAAAGGTATAAAC+AGG - Chr4:46651214-46651233 None:intergenic 20.0%
!!! ATTTTCTATGATTCATTTCT+AGG + Chr4:46652257-46652276 MsG0480020704.01.T01:intron 20.0%
!!! GAATTATTTTTTTAATCCAG+TGG + Chr4:46648627-46648646 MsG0480020704.01.T01:intron 20.0%
!!! TAACATTTTTGTTTGTCTTT+TGG + Chr4:46652624-46652643 MsG0480020704.01.T01:three_prime_UTR 20.0%
!!! TCTAAGTTTTACATTTCTAT+AGG + Chr4:46650872-46650891 MsG0480020704.01.T01:intron 20.0%
!!! TTCTATGAAACCATTTTATT+CGG + Chr4:46646009-46646028 MsG0480020704.01.T01:intron 20.0%
!!! TTGGTAAAATTTTGTATGTT+AGG + Chr4:46643741-46643760 MsG0480020704.01.T01:intron 20.0%
!!! TTTTCTATGATTCATTTCTA+GGG + Chr4:46652258-46652277 MsG0480020704.01.T01:intron 20.0%
!!! TTTTTTTAGTAGAGAATTGA+AGG - Chr4:46649034-46649053 None:intergenic 20.0%
!!! TTTTTTTTTTTTTCTGGCTT+TGG + Chr4:46651308-46651327 MsG0480020704.01.T01:intron 20.0%
! AAATTAAACTTACATAAGGG+TGG + Chr4:46648878-46648897 MsG0480020704.01.T01:intron 25.0%
! AACCTTTCTTCAAAATTGAA+AGG - Chr4:46651336-46651355 None:intergenic 25.0%
! AAGAGAAGGTTAAAATGAAA+AGG - Chr4:46650480-46650499 None:intergenic 25.0%
! AAGTTACTCATCATTTAAGA+TGG - Chr4:46645456-46645475 None:intergenic 25.0%
! AATTGTAAATGTTAGAGATG+AGG + Chr4:46646863-46646882 MsG0480020704.01.T01:intron 25.0%
! ACAATTCCATTCAAACTAAA+AGG - Chr4:46651493-46651512 None:intergenic 25.0%
! ACAGGAATGTTATAACTTAT+AGG - Chr4:46651196-46651215 None:intergenic 25.0%
! ACATGTTAACATTAACATCA+AGG - Chr4:46646951-46646970 None:intergenic 25.0%
! ACTAAAAGGAATTTCTCTAA+AGG - Chr4:46651479-46651498 None:intergenic 25.0%
! ACTTGAATCTTGAATTATTG+AGG + Chr4:46651865-46651884 MsG0480020704.01.T01:intron 25.0%
! AGAAATTATTTGTTTCCAAG+TGG + Chr4:46649794-46649813 MsG0480020704.01.T01:CDS 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + Chr4:46648325-46648344 MsG0480020704.01.T01:intron 25.0%
! ATAACATGGTGCAATAAATT+TGG - Chr4:46645345-46645364 None:intergenic 25.0%
! ATAAGATTTGATTCACGATT+AGG + Chr4:46651961-46651980 MsG0480020704.01.T01:intron 25.0%
! ATGAATTATGTACTTGTTCA+TGG + Chr4:46645479-46645498 MsG0480020704.01.T01:intron 25.0%
! ATTTCTATAGGTAAAAGAAG+AGG + Chr4:46650884-46650903 MsG0480020704.01.T01:intron 25.0%
! CAAAGATAAAACATATGCAT+TGG - Chr4:46649008-46649027 None:intergenic 25.0%
! CAAATTCTAAACTCATTCTT+CGG + Chr4:46649292-46649311 MsG0480020704.01.T01:intron 25.0%
! CTAAATTTAGCAAATCCAAA+AGG - Chr4:46645078-46645097 None:intergenic 25.0%
! CTAGAAATATAATTAAGCAC+TGG - Chr4:46647251-46647270 None:intergenic 25.0%
! GAGCTTAATGAATTTGATAA+AGG + Chr4:46647652-46647671 MsG0480020704.01.T01:intron 25.0%
! GGCATCAAATAATGTAAAAT+GGG - Chr4:46645435-46645454 None:intergenic 25.0%
! GTTGTACTTAATGTTTATGA+TGG + Chr4:46652691-46652710 MsG0480020704.01.T01:three_prime_UTR 25.0%
! TAAAAATGGAACAAACCAAA+AGG - Chr4:46644057-46644076 None:intergenic 25.0%
! TAAAGTGAAAGTGAATGTAT+TGG + Chr4:46652369-46652388 MsG0480020704.01.T01:CDS 25.0%
! TAGAAACTCTTAAGAGAATT+TGG - Chr4:46650186-46650205 None:intergenic 25.0%
! TATCATCATAACTCAAAAGA+TGG - Chr4:46652481-46652500 None:intergenic 25.0%
! TCAAATATGTCATCTATTGA+GGG + Chr4:46649180-46649199 MsG0480020704.01.T01:intron 25.0%
! TCTAAAAGCTAGAAGAAATT+TGG + Chr4:46652131-46652150 MsG0480020704.01.T01:intron 25.0%
! TGGAAGAAAAAAAAATCGAT+TGG - Chr4:46649238-46649257 None:intergenic 25.0%
! TGGCATCAAATAATGTAAAA+TGG - Chr4:46645436-46645455 None:intergenic 25.0%
! TTAAGTAAGATCAATTCTAG+AGG + Chr4:46648487-46648506 MsG0480020704.01.T01:intron 25.0%
! TTAGAAAAGTTGTTGTGATT+GGG + Chr4:46643656-46643675 MsG0480020704.01.T01:intron 25.0%
! TTGTGTTAACAAAACAACAA+TGG + Chr4:46649472-46649491 MsG0480020704.01.T01:intron 25.0%
!! AATTTTCCAACAAAACTTCA+AGG + Chr4:46649567-46649586 MsG0480020704.01.T01:intron 25.0%
!! AGTTGATATAAGTCCATAAT+AGG + Chr4:46643574-46643593 MsG0480020704.01.T01:intron 25.0%
!! ATCACAAATTATTTCTCTCT+TGG + Chr4:46644700-46644719 MsG0480020704.01.T01:intron 25.0%
!! ATTTCTCTAAAGGATATATC+AGG - Chr4:46651469-46651488 None:intergenic 25.0%
!! CGGAAGATTTTTAAACAAAT+TGG + Chr4:46646029-46646048 MsG0480020704.01.T01:intron 25.0%
!! GAAAAAAAAATCGATTGGTT+TGG - Chr4:46649233-46649252 None:intergenic 25.0%
!! GACCTTTTTAACAAAACAAA+AGG + Chr4:46644265-46644284 MsG0480020704.01.T01:intron 25.0%
!! GATTTGAGATATATGATGAT+AGG - Chr4:46644732-46644751 None:intergenic 25.0%
!! TACACTTTTATTGATCTGTT+TGG + Chr4:46643722-46643741 MsG0480020704.01.T01:intron 25.0%
!!! AAACAAAATTGCTTTTCAGT+TGG - Chr4:46646774-46646793 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - Chr4:46648002-46648021 None:intergenic 25.0%
!!! AGTGTTTCTAAATTTTGTGT+AGG - Chr4:46644624-46644643 None:intergenic 25.0%
!!! ATAGTGGATATAACGTAAAA+AGG - Chr4:46649393-46649412 None:intergenic 25.0%
!!! ATTTATCATCTAGTTCTTGA+AGG - Chr4:46647276-46647295 None:intergenic 25.0%
!!! GAAATTCCTTTTAGTTTGAA+TGG + Chr4:46651484-46651503 MsG0480020704.01.T01:intron 25.0%
!!! GTACATGTTTAGTTTCATTT+TGG - Chr4:46648570-46648589 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - Chr4:46648003-46648022 None:intergenic 25.0%
!!! TATGTATGTTTTTTTGGTAG+TGG + Chr4:46647082-46647101 MsG0480020704.01.T01:intron 25.0%
!!! TCAAAGTTGTGTTTTATTCT+TGG - Chr4:46646473-46646492 None:intergenic 25.0%
!!! TCCCTTTTGTTTTGTTAAAA+AGG - Chr4:46644270-46644289 None:intergenic 25.0%
!!! TTAGAGTATGTTTGATTTTG+TGG + Chr4:46647742-46647761 MsG0480020704.01.T01:intron 25.0%
!!! TTCTAGGATAAAATATTTCC+AGG + Chr4:46646076-46646095 MsG0480020704.01.T01:intron 25.0%
!!! TTTGTTTTTCATGTAGATGT+TGG + Chr4:46646505-46646524 MsG0480020704.01.T01:intron 25.0%
AAAACAAAACACAGTTTGAG+CGG + Chr4:46649449-46649468 MsG0480020704.01.T01:intron 30.0%
AAATATGATTTCCACTCCAT+AGG + Chr4:46645217-46645236 MsG0480020704.01.T01:intron 30.0%
AAGGAAGATATTGTTGATGT+TGG + Chr4:46649731-46649750 MsG0480020704.01.T01:CDS 30.0%
ACAGCAAATAATTTCTGTCA+AGG - Chr4:46645964-46645983 None:intergenic 30.0%
ACATGAACAAGAAAATCGTT+AGG - Chr4:46646113-46646132 None:intergenic 30.0%
ACATTAGTAGTAGGTTACTT+TGG + Chr4:46649908-46649927 MsG0480020704.01.T01:intron 30.0%
ACCACAAAGGAAAACTTTAT+AGG + Chr4:46652045-46652064 MsG0480020704.01.T01:intron 30.0%
ACGATTTATTGAACTCACAT+TGG - Chr4:46649263-46649282 None:intergenic 30.0%
ACTTCAAACAAGGTATATGA+CGG + Chr4:46646165-46646184 MsG0480020704.01.T01:CDS 30.0%
AGATCTTGTTGACATTATCA+AGG + Chr4:46651083-46651102 MsG0480020704.01.T01:CDS 30.0%
ATATCCATATTACCCATTTC+TGG - Chr4:46645745-46645764 None:intergenic 30.0%
ATATGTCTTCAAATACACCT+AGG - Chr4:46650845-46650864 None:intergenic 30.0%
ATCACGTATGATTATTTCGA+AGG + Chr4:46647028-46647047 MsG0480020704.01.T01:intron 30.0%
ATGTAAGTAACTAACCTTTC+GGG - Chr4:46649627-46649646 None:intergenic 30.0%
ATTGTTGATGTTGGAAAGAA+AGG + Chr4:46649740-46649759 MsG0480020704.01.T01:CDS 30.0%
CAAATGAATCTACAGAATCA+TGG - Chr4:46652085-46652104 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + Chr4:46648065-46648084 MsG0480020704.01.T01:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG + Chr4:46648324-46648343 MsG0480020704.01.T01:intron 30.0%
CATATGCTAAATGCACAATT+GGG + Chr4:46652422-46652441 MsG0480020704.01.T01:three_prime_UTR 30.0%
CATCAAACTACAAAAGACAA+TGG - Chr4:46651841-46651860 None:intergenic 30.0%
CATGATTCTGTAGATTCATT+TGG + Chr4:46652083-46652102 MsG0480020704.01.T01:intron 30.0%
CCTTGATCTTATATGAAAGT+GGG - Chr4:46647379-46647398 None:intergenic 30.0%
CTAAACAGAAACCAAAGATT+AGG - Chr4:46651051-46651070 None:intergenic 30.0%
CTAAAGGATATATCAGGTAT+TGG - Chr4:46651463-46651482 None:intergenic 30.0%
CTGATCTCTTATCATTTCTT+TGG + Chr4:46650562-46650581 MsG0480020704.01.T01:intron 30.0%
CTTAGAAAAGTTGTTGTGAT+TGG + Chr4:46643655-46643674 MsG0480020704.01.T01:intron 30.0%
GATGTAAGTAACTAACCTTT+CGG - Chr4:46649628-46649647 None:intergenic 30.0%
GCAACTAGTAATAAAACCTT+TGG - Chr4:46646842-46646861 None:intergenic 30.0%
GCATTAAGCATATAGCTATT+TGG - Chr4:46651274-46651293 None:intergenic 30.0%
GGTAAAGGAAAACAAATCTT+CGG + Chr4:46650966-46650985 MsG0480020704.01.T01:CDS 30.0%
GTCAAATATGTCATCTATTG+AGG + Chr4:46649179-46649198 MsG0480020704.01.T01:intron 30.0%
GTTAACACATAATACCACAA+AGG + Chr4:46652032-46652051 MsG0480020704.01.T01:intron 30.0%
TACCTAAAATTAGTGTAGCT+AGG + Chr4:46651788-46651807 MsG0480020704.01.T01:intron 30.0%
TATACTAAGTGATGTTGATG+TGG + Chr4:46644009-46644028 MsG0480020704.01.T01:intron 30.0%
TATATTAACAAGTAAGCCAG+TGG + Chr4:46645365-46645384 MsG0480020704.01.T01:intron 30.0%
TATCTGATTATCTGCAGTTT+AGG + Chr4:46650766-46650785 MsG0480020704.01.T01:intron 30.0%
TATGTCTTCAAATACACCTA+GGG - Chr4:46650844-46650863 None:intergenic 30.0%
TCAACTAGGTCATCTAATAT+GGG - Chr4:46648971-46648990 None:intergenic 30.0%
TCCTTGATCTTATATGAAAG+TGG - Chr4:46647380-46647399 None:intergenic 30.0%
TGCAATCAAGAATTTAGTCA+AGG + Chr4:46644147-46644166 MsG0480020704.01.T01:intron 30.0%
TGTTGTCCCAATTATTAGAA+AGG - Chr4:46651224-46651243 None:intergenic 30.0%
TTAAAAGCTAGACATCAAGA+AGG + Chr4:46644326-46644345 MsG0480020704.01.T01:intron 30.0%
TTATGGACTTATATCAACTC+AGG - Chr4:46643573-46643592 None:intergenic 30.0%
TTGGTTTATGGAAAAAGCTA+AGG - Chr4:46646755-46646774 None:intergenic 30.0%
TTGGTTTCTGTTTAGTGTTA+CGG + Chr4:46651056-46651075 MsG0480020704.01.T01:intron 30.0%
! ACCTATAAAGTTTTCCTTTG+TGG - Chr4:46652049-46652068 None:intergenic 30.0%
! ACTGTTTTCTTTCCATTTGT+TGG + Chr4:46645648-46645667 MsG0480020704.01.T01:intron 30.0%
! AGTACTTTTCATACGAATTC+TGG + Chr4:46645400-46645419 MsG0480020704.01.T01:intron 30.0%
! CACAGTAGTTTTTGTAACTA+TGG + Chr4:46652527-46652546 MsG0480020704.01.T01:three_prime_UTR 30.0%
! CGAAGAATGAGTTTAGAATT+TGG - Chr4:46649294-46649313 None:intergenic 30.0%
! GAAAAAAAACTTGTTTGGCA+CGG + Chr4:46650418-46650437 MsG0480020704.01.T01:intron 30.0%
! GAATGAGTTTAGAATTTGGT+TGG - Chr4:46649290-46649309 None:intergenic 30.0%
! GTTTTGTAGACAATGGAAAA+CGG - Chr4:46646451-46646470 None:intergenic 30.0%
! TAGTGAAGGGTATATACTAT+AGG + Chr4:46650118-46650137 MsG0480020704.01.T01:intron 30.0%
! TTATTGAACTCACATTGGTT+TGG - Chr4:46649258-46649277 None:intergenic 30.0%
! TTGTGTTGGCATTTAGAAAT+TGG + Chr4:46646304-46646323 MsG0480020704.01.T01:CDS 30.0%
! TTTTGTCAACTTTGTATAGC+TGG + Chr4:46651815-46651834 MsG0480020704.01.T01:intron 30.0%
!! AGCCTTTCAATTTTGAAGAA+AGG + Chr4:46651331-46651350 MsG0480020704.01.T01:intron 30.0%
!! ATTGCTTTTCAGTTGGTTTA+TGG - Chr4:46646767-46646786 None:intergenic 30.0%
!! ATTTTAACCTTCTCTTTCCA+GGG + Chr4:46650484-46650503 MsG0480020704.01.T01:intron 30.0%
!! CATGTTTAGTTTCATTTTGG+AGG - Chr4:46648567-46648586 None:intergenic 30.0%
!! TAAGAACCTTGAAGTTTTGT+TGG - Chr4:46649576-46649595 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + Chr4:46648385-46648404 MsG0480020704.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr4:46648404-46648385 None:intergenic 30.0%
!! TATGACAAAAGTTGAGTTGA+AGG + Chr4:46647808-46647827 MsG0480020704.01.T01:intron 30.0%
!! TGAAAAGTACTTTCATGCAA+AGG - Chr4:46645391-46645410 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + Chr4:46648384-46648403 MsG0480020704.01.T01:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr4:46648403-46648384 None:intergenic 30.0%
!!! ATTCTTGGTTTTGTAGACAA+TGG - Chr4:46646458-46646477 None:intergenic 30.0%
!!! CTCAAATTTTGGAATCAGTT+GGG + Chr4:46650919-46650938 MsG0480020704.01.T01:CDS 30.0%
!!! TCAAATTTTGGAATCAGTTG+GGG + Chr4:46650920-46650939 MsG0480020704.01.T01:CDS 30.0%
!!! TCTTGATGTCTAGCTTTTAA+GGG - Chr4:46644326-46644345 None:intergenic 30.0%
!!! TTCTTGATGTCTAGCTTTTA+AGG - Chr4:46644327-46644346 None:intergenic 30.0%
AAAGAATGGTGAGGTGATAA+AGG - Chr4:46647330-46647349 None:intergenic 35.0%
AAGCGAACATCGAAAAATAG+TGG - Chr4:46649409-46649428 None:intergenic 35.0%
AAGGAAAACAAATCTTCGGA+AGG + Chr4:46650970-46650989 MsG0480020704.01.T01:CDS 35.0%
AAGTAGGGACTAAACTTACA+AGG + Chr4:46648369-46648388 MsG0480020704.01.T01:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG - Chr4:46648388-46648369 None:intergenic 35.0%
ACAAAGTGAAACCTCGTAAT+TGG - Chr4:46651008-46651027 None:intergenic 35.0%
ACACCTTCAATATGAAGTGT+TGG - Chr4:46650239-46650258 None:intergenic 35.0%
ACGCAAGATACTGATAATCA+TGG - Chr4:46651610-46651629 None:intergenic 35.0%
ATCAATCGATAAGGATAAGC+AGG - Chr4:46651583-46651602 None:intergenic 35.0%
ATGCATATTGTTACATGTGC+AGG + Chr4:46644592-46644611 MsG0480020704.01.T01:intron 35.0%
ATGGAAAGAAAACAGTGACA+AGG - Chr4:46645644-46645663 None:intergenic 35.0%
ATGTCTTCAAATACACCTAG+GGG - Chr4:46650843-46650862 None:intergenic 35.0%
ATGTGCATCAGAAAGATGAA+TGG - Chr4:46651125-46651144 None:intergenic 35.0%
CAAAGTGAAACCTCGTAATT+GGG - Chr4:46651007-46651026 None:intergenic 35.0%
CACACTTCAACTTGACTTTA+TGG + Chr4:46643900-46643919 MsG0480020704.01.T01:intron 35.0%
CATACTACTTGATGTTTGAG+AGG + Chr4:46644948-46644967 MsG0480020704.01.T01:intron 35.0%
CCAATTGTGCATTTAGCATA+TGG - Chr4:46652424-46652443 None:intergenic 35.0%
CCATATGCTAAATGCACAAT+TGG + Chr4:46652421-46652440 MsG0480020704.01.T01:three_prime_UTR 35.0%
CCCACTTTCATATAAGATCA+AGG + Chr4:46647376-46647395 MsG0480020704.01.T01:intron 35.0%
CCTTAAAAGCTAGCTATCAA+GGG + Chr4:46644519-46644538 MsG0480020704.01.T01:intron 35.0%
CGAGCTAAATACCCTAATTA+CGG + Chr4:46643626-46643645 MsG0480020704.01.T01:intron 35.0%
CTAAGAAACCACCGTAATTA+GGG - Chr4:46643640-46643659 None:intergenic 35.0%
CTCTCAAACATCAAGTAGTA+TGG - Chr4:46644950-46644969 None:intergenic 35.0%
CTGATGTCTATGAGATGTTT+AGG - Chr4:46648693-46648712 None:intergenic 35.0%
CTTAAAAGCTAGCTATCAAG+GGG + Chr4:46644520-46644539 MsG0480020704.01.T01:intron 35.0%
GAAAACTGAACACACATTCA+AGG - Chr4:46652658-46652677 None:intergenic 35.0%
GAACCAACACTTCATATTGA+AGG + Chr4:46650233-46650252 MsG0480020704.01.T01:intron 35.0%
GACAATGCATACTATATGCA+AGG - Chr4:46647127-46647146 None:intergenic 35.0%
GACATTCTTTGCACCAAATT+TGG + Chr4:46648766-46648785 MsG0480020704.01.T01:intron 35.0%
GATAGAGGAAGAAAGAATTG+AGG + Chr4:46650514-46650533 MsG0480020704.01.T01:CDS 35.0%
GATGGTGTATTTATGTTGCT+TGG - Chr4:46644551-46644570 None:intergenic 35.0%
GTAGTCATAACGTCAACTAT+TGG - Chr4:46644667-46644686 None:intergenic 35.0%
GTATGATTGTGCCTAATCTT+TGG + Chr4:46651037-46651056 MsG0480020704.01.T01:intron 35.0%
GTATTCAAGGAAACAAACCA+AGG + Chr4:46648829-46648848 MsG0480020704.01.T01:intron 35.0%
GTCAACTAGGTCATCTAATA+TGG - Chr4:46648972-46648991 None:intergenic 35.0%
GTGCTTGGGTACTTATAAAT+TGG - Chr4:46644486-46644505 None:intergenic 35.0%
TACAAAGTCGATACACACTA+GGG - Chr4:46651686-46651705 None:intergenic 35.0%
TACACACTAGGGATTCATAT+CGG - Chr4:46651675-46651694 None:intergenic 35.0%
TACACATATTAACGTACACG+TGG - Chr4:46646897-46646916 None:intergenic 35.0%
TAGGCACAATCATACATACA+TGG - Chr4:46651032-46651051 None:intergenic 35.0%
TCCAAAGACAATCAATGCAA+GGG - Chr4:46650457-46650476 None:intergenic 35.0%
TCCTTAAAAGCTAGCTATCA+AGG + Chr4:46644518-46644537 MsG0480020704.01.T01:intron 35.0%
TCTAAGAAACCACCGTAATT+AGG - Chr4:46643641-46643660 None:intergenic 35.0%
TGAACATTGGACTTCAAACA+AGG + Chr4:46646155-46646174 MsG0480020704.01.T01:CDS 35.0%
TGAATCTACAGAATCATGGA+AGG - Chr4:46652081-46652100 None:intergenic 35.0%
TGAGCAAAATCAATGTGAGA+AGG - Chr4:46643863-46643882 None:intergenic 35.0%
TGGTATTCGTGTTTGTGTTA+TGG + Chr4:46650365-46650384 MsG0480020704.01.T01:intron 35.0%
TTCCTAGATGGTATGAACAT+TGG + Chr4:46646142-46646161 MsG0480020704.01.T01:CDS 35.0%
! AGAAGAACTGTTCAAGTTAG+CGG - Chr4:46649546-46649565 None:intergenic 35.0%
! AGCTTATAGCTTTACATGCA+AGG - Chr4:46650705-46650724 None:intergenic 35.0%
! ATAAATTTGGAACTGATCCG+CGG - Chr4:46645332-46645351 None:intergenic 35.0%
! CACAGAATTGCATAAGTTGA+AGG + Chr4:46652448-46652467 MsG0480020704.01.T01:three_prime_UTR 35.0%
! CCAGGATTTTTGAATAGTGA+GGG - Chr4:46644913-46644932 None:intergenic 35.0%
! CTAAAGTGTTCAGCTTGTAA+AGG + Chr4:46646548-46646567 MsG0480020704.01.T01:CDS 35.0%
! GATTTTCTTGTTCATGTCTC+AGG + Chr4:46646116-46646135 MsG0480020704.01.T01:intron 35.0%
! GGTTTTCAGTGTCTTAGAAA+GGG - Chr4:46644452-46644471 None:intergenic 35.0%
! GTTGATTGGTTGACCAAATT+TGG - Chr4:46648782-46648801 None:intergenic 35.0%
! TCCAGGATTTTTGAATAGTG+AGG - Chr4:46644914-46644933 None:intergenic 35.0%
! TCTATGATTCATTTCTAGGG+AGG + Chr4:46652261-46652280 MsG0480020704.01.T01:intron 35.0%
! TGAACGTGTTATTACTCCAA+AGG + Chr4:46646823-46646842 MsG0480020704.01.T01:intron 35.0%
! TGAATGTGTGTTCAGTTTTC+AGG + Chr4:46652658-46652677 MsG0480020704.01.T01:three_prime_UTR 35.0%
! TGCCTAGCTACACTAATTTT+AGG - Chr4:46651793-46651812 None:intergenic 35.0%
! TGGTTTTCAGTGTCTTAGAA+AGG - Chr4:46644453-46644472 None:intergenic 35.0%
! TTAGTGAAGTTTTTACCCCT+AGG + Chr4:46650825-46650844 MsG0480020704.01.T01:intron 35.0%
!! ACTGCAACTTGCTCAAATTT+TGG + Chr4:46650908-46650927 MsG0480020704.01.T01:CDS 35.0%
!! CATTTTAACCTTCTCTTTCC+AGG + Chr4:46650483-46650502 MsG0480020704.01.T01:intron 35.0%
!! TAAGAGTGTTAGAGTTCAAG+AGG + Chr4:46650640-46650659 MsG0480020704.01.T01:intron 35.0%
!! TACCTGACGTTTTGATAGTA+CGG - Chr4:46646397-46646416 None:intergenic 35.0%
!! TTCTTTCCATTTGTTGGTTC+TGG + Chr4:46645654-46645673 MsG0480020704.01.T01:intron 35.0%
!!! AATCGATTGGTTTGGGATTT+TGG - Chr4:46649225-46649244 None:intergenic 35.0%
!!! CATTGATTTTGCTCATCACA+AGG + Chr4:46643868-46643887 MsG0480020704.01.T01:CDS 35.0%
!!! GCTCAAATTTTGGAATCAGT+TGG + Chr4:46650918-46650937 MsG0480020704.01.T01:CDS 35.0%
!!! TATGTTTTTTTGGTAGTGGC+CGG + Chr4:46647086-46647105 MsG0480020704.01.T01:intron 35.0%
!!! TCTGGTTTTACAAAGTCATC+AGG - Chr4:46643770-46643789 None:intergenic 35.0%
AAATGCCAACACAAAGCGAT+CGG - Chr4:46646298-46646317 None:intergenic 40.0%
AACCGTACTATCAAAACGTC+AGG + Chr4:46646392-46646411 MsG0480020704.01.T01:CDS 40.0%
AACTGAACACACATTCAAGG+AGG - Chr4:46652655-46652674 None:intergenic 40.0%
AACTTGACTTTATGGTGTGC+TGG + Chr4:46643908-46643927 MsG0480020704.01.T01:intron 40.0%
AAGAAAACAGTGACAAGGCT+AGG - Chr4:46645639-46645658 None:intergenic 40.0%
AAGGAAACAAACCAAGGAAG+AGG + Chr4:46648835-46648854 MsG0480020704.01.T01:intron 40.0%
AAGTAGTATGGAATCAGCGA+CGG - Chr4:46644938-46644957 None:intergenic 40.0%
AATTGAGGCTGAGAAACAAC+GGG + Chr4:46650529-46650548 MsG0480020704.01.T01:CDS 40.0%
ACACACTAGGGATTCATATC+GGG - Chr4:46651674-46651693 None:intergenic 40.0%
ACGGTATCTACCTCGATATT+TGG + Chr4:46645539-46645558 MsG0480020704.01.T01:intron 40.0%
ACTGAACACACATTCAAGGA+GGG - Chr4:46652654-46652673 None:intergenic 40.0%
ACTGAACTTCAGATCAAAGG+TGG - Chr4:46650078-46650097 None:intergenic 40.0%
AGAGTTAAAACTTCACCCTG+AGG + Chr4:46652339-46652358 MsG0480020704.01.T01:CDS 40.0%
AGCTTGTAAAGGAGCTTATG+AGG + Chr4:46646559-46646578 MsG0480020704.01.T01:CDS 40.0%
AGGAAACAAACCAAGGAAGA+GGG + Chr4:46648836-46648855 MsG0480020704.01.T01:intron 40.0%
AGGTGAACTTCTTGATGTCA+AGG + Chr4:46649760-46649779 MsG0480020704.01.T01:CDS 40.0%
AGTGCTACATAGGTTACTAG+CGG + Chr4:46650095-46650114 MsG0480020704.01.T01:intron 40.0%
ATACGTTCTACCCAATTACG+AGG + Chr4:46650994-46651013 MsG0480020704.01.T01:intron 40.0%
ATCCTAGAAGTCGATGTTAG+AGG - Chr4:46646065-46646084 None:intergenic 40.0%
ATGTCGACATCATGAAGTTG+TGG - Chr4:46648751-46648770 None:intergenic 40.0%
ATTTCCACTCCATAGGTTAC+AGG + Chr4:46645224-46645243 MsG0480020704.01.T01:intron 40.0%
CCCTCACTATTCAAAAATCC+TGG + Chr4:46644910-46644929 MsG0480020704.01.T01:intron 40.0%
CCTCGATATTTGGATGATTG+CGG + Chr4:46645549-46645568 MsG0480020704.01.T01:intron 40.0%
CTAGGTCATCTAATATGGGA+TGG - Chr4:46648967-46648986 None:intergenic 40.0%
CTGTCAATGAAACATTCACG+TGG - Chr4:46645917-46645936 None:intergenic 40.0%
GAAGACAAAGAAAACCCGAA+AGG + Chr4:46649610-46649629 MsG0480020704.01.T01:intron 40.0%
GAATCCATCTTGAATGGAAG+AGG - Chr4:46645269-46645288 None:intergenic 40.0%
GAATTGAGGCTGAGAAACAA+CGG + Chr4:46650528-46650547 MsG0480020704.01.T01:CDS 40.0%
GAGATATATGATGATAGGCG+TGG - Chr4:46644727-46644746 None:intergenic 40.0%
GCTAAATACCCTAATTACGG+TGG + Chr4:46643629-46643648 MsG0480020704.01.T01:intron 40.0%
GCTCTCTATGATACCTTACT+TGG + Chr4:46644398-46644417 MsG0480020704.01.T01:intron 40.0%
GCTTGTAAAGGAGCTTATGA+GGG + Chr4:46646560-46646579 MsG0480020704.01.T01:CDS 40.0%
GGAGAGAAAAGACTGAAAAG+AGG + Chr4:46648648-46648667 MsG0480020704.01.T01:intron 40.0%
GGTGACATGATTGTACTTCA+AGG + Chr4:46646186-46646205 MsG0480020704.01.T01:CDS 40.0%
GTACAAAGTCGATACACACT+AGG - Chr4:46651687-46651706 None:intergenic 40.0%
GTCATCTAATATGGGATGGA+GGG - Chr4:46648963-46648982 None:intergenic 40.0%
GTCCAAAGACAATCAATGCA+AGG - Chr4:46650458-46650477 None:intergenic 40.0%
GTCCAAAGATTGTGAAGAGA+GGG + Chr4:46644031-46644050 MsG0480020704.01.T01:intron 40.0%
GTCCAATGTTCATACCATCT+AGG - Chr4:46646147-46646166 None:intergenic 40.0%
GTGACCAGAAATGGGTAATA+TGG + Chr4:46645738-46645757 MsG0480020704.01.T01:CDS 40.0%
GTGTTAGAGTTCAAGAGGAA+AGG + Chr4:46650645-46650664 MsG0480020704.01.T01:intron 40.0%
GTTATGAGGGATTCCAAACA+TGG + Chr4:46646623-46646642 MsG0480020704.01.T01:intron 40.0%
TAGAAATCTTACTTGCCACC+AGG - Chr4:46645858-46645877 None:intergenic 40.0%
TATAAGTACCCAAGCACTTG+AGG + Chr4:46644489-46644508 MsG0480020704.01.T01:intron 40.0%
TCAGATCAAAGGTGGATACT+CGG - Chr4:46650070-46650089 None:intergenic 40.0%
TGAGCTTTGCTCAGTTAGTA+TGG - Chr4:46647149-46647168 None:intergenic 40.0%
TGATGTGTCAGTGTTGTGTT+TGG + Chr4:46650345-46650364 MsG0480020704.01.T01:intron 40.0%
TGCATACTATATGCAAGGTC+CGG - Chr4:46647122-46647141 None:intergenic 40.0%
TGGCATTTAGAAATTGGCTG+AGG + Chr4:46646310-46646329 MsG0480020704.01.T01:CDS 40.0%
TGTAAAACCAGAGTTTGCGA+CGG + Chr4:46643778-46643797 MsG0480020704.01.T01:CDS 40.0%
TGTTGAACTTCCTGAGATCA+GGG + Chr4:46652297-46652316 MsG0480020704.01.T01:CDS 40.0%
TTATCAAGGCACAGCTTCAA+AGG + Chr4:46651097-46651116 MsG0480020704.01.T01:CDS 40.0%
TTCAATTCCCTGGAAAGAGA+AGG - Chr4:46650494-46650513 None:intergenic 40.0%
TTCCAGGGAATTGAAGATAG+AGG + Chr4:46650499-46650518 MsG0480020704.01.T01:intron 40.0%
TTCCTCTATCTTCAATTCCC+TGG - Chr4:46650504-46650523 None:intergenic 40.0%
TTGTTGAACTTCCTGAGATC+AGG + Chr4:46652296-46652315 MsG0480020704.01.T01:CDS 40.0%
TTTCTTGTTCATGTCTCAGG+TGG + Chr4:46646119-46646138 MsG0480020704.01.T01:intron 40.0%
! AAGACAACGAGTGTGTTGAT+TGG - Chr4:46648796-46648815 None:intergenic 40.0%
! AGCACTGAACTTCAGATCAA+AGG - Chr4:46650081-46650100 None:intergenic 40.0%
! ATATGCATTGGTACGTGTGT+TGG - Chr4:46648996-46649015 None:intergenic 40.0%
! ATGATTCATTTCTAGGGAGG+TGG + Chr4:46652264-46652283 MsG0480020704.01.T01:intron 40.0%
! ATTCAGCGCGATCTTTTCTA+CGG + Chr4:46643806-46643825 MsG0480020704.01.T01:CDS 40.0%
! CTTCATATTGAAGGTGTGTC+TGG + Chr4:46650242-46650261 MsG0480020704.01.T01:intron 40.0%
! GATACCTTACTTGGTCTTTC+CGG + Chr4:46644407-46644426 MsG0480020704.01.T01:intron 40.0%
! GTTTTTGTAACTATGGCCCA+TGG + Chr4:46652534-46652553 MsG0480020704.01.T01:three_prime_UTR 40.0%
! TAAATTTGGAACTGATCCGC+GGG - Chr4:46645331-46645350 None:intergenic 40.0%
! TCAGGATTTTCTGCCATGTT+TGG - Chr4:46646639-46646658 None:intergenic 40.0%
! TCTGAAGTTCAGTGCTACAT+AGG + Chr4:46650085-46650104 MsG0480020704.01.T01:intron 40.0%
! TGCACAGTCAATTTCCCTTT+TGG + Chr4:46645060-46645079 MsG0480020704.01.T01:intron 40.0%
! TTTCAGTCTTTTCTCTCCAC+TGG - Chr4:46648646-46648665 None:intergenic 40.0%
!! AACCTCTAACATCGACTTCT+AGG + Chr4:46646060-46646079 MsG0480020704.01.T01:intron 40.0%
!! CATGGTGCTATCAATCGATA+AGG - Chr4:46651592-46651611 None:intergenic 40.0%
!! CGTTTTGATAGTACGGTTGA+AGG - Chr4:46646390-46646409 None:intergenic 40.0%
!! GCTTTTCAGGAGCTAATGAA+GGG + Chr4:46645303-46645322 MsG0480020704.01.T01:CDS 40.0%
!! TAAGGCGTTGTTGTTGTTGT+TGG - Chr4:46646589-46646608 None:intergenic 40.0%
!! TAGATCGTTTTGTTCACGAC+TGG + Chr4:46651988-46652007 MsG0480020704.01.T01:intron 40.0%
!! TCCCTTGCATTGATTGTCTT+TGG + Chr4:46650453-46650472 MsG0480020704.01.T01:intron 40.0%
!!! ATGTTTTTTTGGTAGTGGCC+GGG + Chr4:46647087-46647106 MsG0480020704.01.T01:intron 40.0%
!!! CCCTTGATAGCTAGCTTTTA+AGG - Chr4:46644522-46644541 None:intergenic 40.0%
!!! CGTGGTTTTATAGCAGAGAA+TGG - Chr4:46645899-46645918 None:intergenic 40.0%
!!! GATGTCTAGCTTTTAAGGGA+GGG - Chr4:46644322-46644341 None:intergenic 40.0%
!!! GTCAAGGACAGTGCTTTTTT+AGG + Chr4:46644163-46644182 MsG0480020704.01.T01:intron 40.0%
!!! TGATGTCTAGCTTTTAAGGG+AGG - Chr4:46644323-46644342 None:intergenic 40.0%
AACGCCTTATCCCACTAAGT+GGG + Chr4:46646600-46646619 MsG0480020704.01.T01:CDS 45.0%
AATATGCATCCGTCCCTGTA+TGG - Chr4:46644581-46644600 None:intergenic 45.0%
AATGGCCAACCTGAATGGTT+CGG + Chr4:46646342-46646361 MsG0480020704.01.T01:CDS 45.0%
ACATGGCAGAAAATCCTGAC+TGG + Chr4:46646640-46646659 MsG0480020704.01.T01:intron 45.0%
ACCATCGAGCATTCCATACA+GGG + Chr4:46644565-46644584 MsG0480020704.01.T01:intron 45.0%
ACTAGGGATTCATATCGGGT+GGG - Chr4:46651670-46651689 None:intergenic 45.0%
ACTGAGCCAGAACCAACAAA+TGG - Chr4:46645663-46645682 None:intergenic 45.0%
AGACGACGAGGGAATCTTAA+TGG + Chr4:46652565-46652584 MsG0480020704.01.T01:three_prime_UTR 45.0%
AGGTTACTAGCGGTAGTGAA+GGG + Chr4:46650105-46650124 MsG0480020704.01.T01:intron 45.0%
ATGGATTCACGTGGTTCATG+GGG + Chr4:46645281-46645300 MsG0480020704.01.T01:CDS 45.0%
ATGTTCCTTCAATGTCCCCA+TGG + Chr4:46645763-46645782 MsG0480020704.01.T01:CDS 45.0%
CAAGCAGAAAAACAGTGAGG+CGG + Chr4:46644976-46644995 MsG0480020704.01.T01:intron 45.0%
CAAGCCTCTTCCATTCAAGA+TGG + Chr4:46645262-46645281 MsG0480020704.01.T01:CDS 45.0%
CATACTATATGCAAGGTCCG+GGG - Chr4:46647120-46647139 None:intergenic 45.0%
CATCTTGAATGGAAGAGGCT+TGG - Chr4:46645264-46645283 None:intergenic 45.0%
CCACGTGAATCCATCTTGAA+TGG - Chr4:46645275-46645294 None:intergenic 45.0%
CCGAAATTTCTTCCAGCTCA+CGG + Chr4:46645820-46645839 MsG0480020704.01.T01:CDS 45.0%
CCGCAATCATCCAAATATCG+AGG - Chr4:46645552-46645571 None:intergenic 45.0%
CCGTGAGCTGGAAGAAATTT+CGG - Chr4:46645823-46645842 None:intergenic 45.0%
CGTGAGCTGGAAGAAATTTC+GGG - Chr4:46645822-46645841 None:intergenic 45.0%
CTACGGCTATGATACTCTCA+TGG + Chr4:46643823-46643842 MsG0480020704.01.T01:CDS 45.0%
CTGAACACACATTCAAGGAG+GGG - Chr4:46652653-46652672 None:intergenic 45.0%
GAAAAACAGTGAGGCGGTAT+AGG + Chr4:46644982-46645001 MsG0480020704.01.T01:intron 45.0%
GAACTTCTTGATGTCAAGGC+TGG + Chr4:46649764-46649783 MsG0480020704.01.T01:CDS 45.0%
GAAGAGTTCCTCAAGTGCTT+GGG - Chr4:46644500-46644519 None:intergenic 45.0%
GATAGTACGGTTGAAGGCAA+TGG - Chr4:46646384-46646403 None:intergenic 45.0%
GCATACTATATGCAAGGTCC+GGG - Chr4:46647121-46647140 None:intergenic 45.0%
GCTTTCAAGGTGAAGCGTAA+AGG + Chr4:46650942-46650961 MsG0480020704.01.T01:CDS 45.0%
GGACACTTTCTCAGATGTGT+GGG + Chr4:46652586-46652605 MsG0480020704.01.T01:three_prime_UTR 45.0%
GGTCATCTAATATGGGATGG+AGG - Chr4:46648964-46648983 None:intergenic 45.0%
GGTCCAAAGATTGTGAAGAG+AGG + Chr4:46644030-46644049 MsG0480020704.01.T01:intron 45.0%
GGTCTTTGACATCGAGACAT+GGG + Chr4:46650280-46650299 MsG0480020704.01.T01:intron 45.0%
GTGAAGCGTAAAGGTGGTAA+AGG + Chr4:46650951-46650970 MsG0480020704.01.T01:CDS 45.0%
GTGCAAGCAGAAAAACAGTG+AGG + Chr4:46644973-46644992 MsG0480020704.01.T01:intron 45.0%
GTTAATGTCACCGCCATTCT+CGG - Chr4:46646238-46646257 None:intergenic 45.0%
TAACCCCACTTAGTGGGATA+AGG - Chr4:46646607-46646626 None:intergenic 45.0%
TACGTGTGTTGGAGTCAACT+AGG - Chr4:46648985-46649004 None:intergenic 45.0%
TACTTTCATGCAAAGGCCAC+TGG - Chr4:46645384-46645403 None:intergenic 45.0%
TAGGTTACTAGCGGTAGTGA+AGG + Chr4:46650104-46650123 MsG0480020704.01.T01:intron 45.0%
TATCATAGAGAGCAGCCACT+GGG - Chr4:46644391-46644410 None:intergenic 45.0%
TCACTTTAGCTGTGACCTCA+GGG - Chr4:46652357-46652376 None:intergenic 45.0%
TCTCTCCTTCCTGTAACCTA+TGG - Chr4:46645236-46645255 None:intergenic 45.0%
TGGACACTTTCTCAGATGTG+TGG + Chr4:46652585-46652604 MsG0480020704.01.T01:three_prime_UTR 45.0%
TGGTCTTTGACATCGAGACA+TGG + Chr4:46650279-46650298 MsG0480020704.01.T01:intron 45.0%
TGTCAAAGACCAACACGTGT+TGG - Chr4:46650271-46650290 None:intergenic 45.0%
TGTCATCTATTGAGGGACAG+AGG + Chr4:46649187-46649206 MsG0480020704.01.T01:intron 45.0%
TTAGAAAGGGCTCCCTATGA+AGG - Chr4:46644439-46644458 None:intergenic 45.0%
TTCAAGGTGAAGCGTAAAGG+TGG + Chr4:46650945-46650964 MsG0480020704.01.T01:CDS 45.0%
TTCACTTTAGCTGTGACCTC+AGG - Chr4:46652358-46652377 None:intergenic 45.0%
TTGATAAGTACCCAACCACC+CGG + Chr4:46644292-46644311 MsG0480020704.01.T01:intron 45.0%
TTTCTCGCAGAAACCGAGAA+TGG + Chr4:46646222-46646241 MsG0480020704.01.T01:CDS 45.0%
! AGATGGATTCACGTGGTTCA+TGG + Chr4:46645279-46645298 MsG0480020704.01.T01:CDS 45.0%
! ATTGTGAAGAGAGGGCCTTT+TGG + Chr4:46644039-46644058 MsG0480020704.01.T01:intron 45.0%
! CCATTCAAGATGGATTCACG+TGG + Chr4:46645272-46645291 MsG0480020704.01.T01:CDS 45.0%
! CGTTAGGATTTGCTTGTTCC+TGG - Chr4:46646097-46646116 None:intergenic 45.0%
! GATGGATTCACGTGGTTCAT+GGG + Chr4:46645280-46645299 MsG0480020704.01.T01:CDS 45.0%
! TACTCAGCTGCGCATAGTTT+TGG + Chr4:46646705-46646724 MsG0480020704.01.T01:intron 45.0%
!! GGCTTTTCAGGAGCTAATGA+AGG + Chr4:46645302-46645321 MsG0480020704.01.T01:CDS 45.0%
!! ATATGAATATTATAAAAAAT+TGG + Chr4:46644763-46644782 MsG0480020704.01.T01:intron 5.0%
!! ATTTACATAATATAAAAAAT+TGG + Chr4:46644885-46644904 MsG0480020704.01.T01:intron 5.0%
!!! ATAAGTAATTTTTTTTTATA+GGG - Chr4:46647970-46647989 None:intergenic 5.0%
!!! ATTATTTATAATTTTATTCT+AGG + Chr4:46647624-46647643 MsG0480020704.01.T01:intron 5.0%
!!! TAATTTTATTTATAAAAGAA+TGG - Chr4:46647344-46647363 None:intergenic 5.0%
!!! TATAAGTAATTTTTTTTTAT+AGG - Chr4:46647971-46647990 None:intergenic 5.0%
!!! TTATTTATAATTTTATTCTA+GGG + Chr4:46647625-46647644 MsG0480020704.01.T01:intron 5.0%
!!! TTTTAATTTTTAATTGAAAA+AGG + Chr4:46645516-46645535 MsG0480020704.01.T01:intron 5.0%
!!! TTTTATTTTTTTTACAAAAA+AGG - Chr4:46649362-46649381 None:intergenic 5.0%
AATCTTACTTGCCACCAGGC+AGG - Chr4:46645854-46645873 None:intergenic 50.0%
ACACAACTGTTGCACCAGTC+AGG - Chr4:46646657-46646676 None:intergenic 50.0%
ACGCCTTATCCCACTAAGTG+GGG + Chr4:46646601-46646620 MsG0480020704.01.T01:CDS 50.0%
AGAAATTGGCTGAGGCGACA+CGG + Chr4:46646318-46646337 MsG0480020704.01.T01:CDS 50.0%
AGTGAGGCGGTATAGGAGAT+GGG + Chr4:46644989-46645008 MsG0480020704.01.T01:intron 50.0%
ATGCGCAGCTGAGTATCTGA+TGG - Chr4:46646700-46646719 None:intergenic 50.0%
ATGTTCACCGTCGCAAACTC+TGG - Chr4:46643788-46643807 None:intergenic 50.0%
CAACGCCTTATCCCACTAAG+TGG + Chr4:46646599-46646618 MsG0480020704.01.T01:CDS 50.0%
CACCATCGAGCATTCCATAC+AGG + Chr4:46644564-46644583 MsG0480020704.01.T01:intron 50.0%
CACTAGGGATTCATATCGGG+TGG - Chr4:46651671-46651690 None:intergenic 50.0%
CCACTCCATAGGTTACAGGA+AGG + Chr4:46645228-46645247 MsG0480020704.01.T01:intron 50.0%
CCCACTAAGTGGGGTTATGA+GGG + Chr4:46646610-46646629 MsG0480020704.01.T01:intron 50.0%
CCCTCATAACCCCACTTAGT+GGG - Chr4:46646613-46646632 None:intergenic 50.0%
CCTTCCTGTAACCTATGGAG+TGG - Chr4:46645231-46645250 None:intergenic 50.0%
CGAAGTTCATCCCTCTTCCT+TGG - Chr4:46648849-46648868 None:intergenic 50.0%
CTAACTGAGCAAAGCTCACG+AGG + Chr4:46647151-46647170 MsG0480020704.01.T01:intron 50.0%
CTGACCGGAAAGACCAAGTA+AGG - Chr4:46644414-46644433 None:intergenic 50.0%
CTTCCTGAGATCAGGGAAAC+AGG + Chr4:46652304-46652323 MsG0480020704.01.T01:CDS 50.0%
GCAATCTGAGCTTTGCCACT+TGG - Chr4:46649812-46649831 None:intergenic 50.0%
GCGGTGAAACTGTGTTGCAA+TGG - Chr4:46649527-46649546 None:intergenic 50.0%
GGAAGAGTTCCTCAAGTGCT+TGG - Chr4:46644501-46644520 None:intergenic 50.0%
GGAATCAGTTGGGGCTTTCA+AGG + Chr4:46650929-46650948 MsG0480020704.01.T01:CDS 50.0%
GGCCCTCTCTTCACAATCTT+TGG - Chr4:46644036-46644055 None:intergenic 50.0%
GTATCATAGAGAGCAGCCAC+TGG - Chr4:46644392-46644411 None:intergenic 50.0%
GTCTGGTATCCAACACGTGT+TGG + Chr4:46650259-46650278 MsG0480020704.01.T01:intron 50.0%
TCCCACTAAGTGGGGTTATG+AGG + Chr4:46646609-46646628 MsG0480020704.01.T01:intron 50.0%
TCCCTCATAACCCCACTTAG+TGG - Chr4:46646614-46646633 None:intergenic 50.0%
TCCCTGTATGGAATGCTCGA+TGG - Chr4:46644569-46644588 None:intergenic 50.0%
TCGAGCATTCCATACAGGGA+CGG + Chr4:46644569-46644588 MsG0480020704.01.T01:intron 50.0%
TCTCCTGTTTCCCTGATCTC+AGG - Chr4:46652310-46652329 None:intergenic 50.0%
TCTTGCCGAACCATTCAGGT+TGG - Chr4:46646350-46646369 None:intergenic 50.0%
TGATAAGTACCCAACCACCC+GGG + Chr4:46644293-46644312 MsG0480020704.01.T01:intron 50.0%
TGGATGATTGCGGCATCATG+CGG + Chr4:46645559-46645578 MsG0480020704.01.T01:intron 50.0%
TGTAACTATGGCCCATGGCT+CGG + Chr4:46652539-46652558 MsG0480020704.01.T01:three_prime_UTR 50.0%
TGTCTCAGGTGGTTCCTAGA+TGG + Chr4:46646130-46646149 MsG0480020704.01.T01:intron 50.0%
! ATTTCGGGCACTGCAAACGA+TGG - Chr4:46645807-46645826 None:intergenic 50.0%
! CTCAGATGTGTGGGCATTGT+TGG + Chr4:46652595-46652614 MsG0480020704.01.T01:three_prime_UTR 50.0%
! GTTGTGTTTTGCGCGACTTC+TGG + Chr4:46646670-46646689 MsG0480020704.01.T01:intron 50.0%
!! ATTTCTGGTCACCAACCACG+GGG - Chr4:46645730-46645749 None:intergenic 50.0%
!! CATTTCTGGTCACCAACCAC+GGG - Chr4:46645731-46645750 None:intergenic 50.0%
!! CCATTTCTGGTCACCAACCA+CGG - Chr4:46645732-46645751 None:intergenic 50.0%
!! CGTGGTTGGTGACCAGAAAT+GGG + Chr4:46645730-46645749 MsG0480020704.01.T01:CDS 50.0%
!! CTTTTAAGGGAGGGTTTCCC+GGG - Chr4:46644313-46644332 None:intergenic 50.0%
!! GCTTTTAAGGGAGGGTTTCC+CGG - Chr4:46644314-46644333 None:intergenic 50.0%
ACAAAGCGATCGGCCTGTGT+TGG - Chr4:46646288-46646307 None:intergenic 55.0%
ACACGTGTCAGTGTCGTGTC+TGG - Chr4:46649957-46649976 None:intergenic 55.0%
ACAGGCCGATCGCTTTGTGT+TGG + Chr4:46646290-46646309 MsG0480020704.01.T01:CDS 55.0%
ACGATGGAGCGAGTCTTACC+AGG - Chr4:46645791-46645810 None:intergenic 55.0%
ACGGCAATGGCCAACCTGAA+TGG + Chr4:46646337-46646356 MsG0480020704.01.T01:CDS 55.0%
AGGCGGTATAGGAGATGGGT+GGG + Chr4:46644993-46645012 MsG0480020704.01.T01:intron 55.0%
ATGGAATCAGCGACGGATCC+AGG - Chr4:46644931-46644950 None:intergenic 55.0%
CAGTGAGGCGGTATAGGAGA+TGG + Chr4:46644988-46645007 MsG0480020704.01.T01:intron 55.0%
CCTCACCTTCACACCAACAC+AGG + Chr4:46646272-46646291 MsG0480020704.01.T01:CDS 55.0%
CTCGCAGAAACCGAGAATGG+CGG + Chr4:46646225-46646244 MsG0480020704.01.T01:CDS 55.0%
CTGCTCTTGCCGAACCATTC+AGG - Chr4:46646354-46646373 None:intergenic 55.0%
GAGCTAATGAAGGGAACCCG+CGG + Chr4:46645312-46645331 MsG0480020704.01.T01:CDS 55.0%
GATACCAAACTCCCCGTGGT+TGG + Chr4:46645716-46645735 MsG0480020704.01.T01:CDS 55.0%
GATCGATACCAAACTCCCCG+TGG + Chr4:46645712-46645731 MsG0480020704.01.T01:CDS 55.0%
GTACGGTTGAAGGCAATGGC+TGG - Chr4:46646380-46646399 None:intergenic 55.0%
TCGGCTCTCCTGGGATGTTT+GGG - Chr4:46644365-46644384 None:intergenic 55.0%
TTCAATGTCCCCATGGCACC+TGG + Chr4:46645770-46645789 MsG0480020704.01.T01:CDS 55.0%
TTCCGGTCAGCGCCTTCATA+GGG + Chr4:46644424-46644443 MsG0480020704.01.T01:intron 55.0%
TTTCCGGTCAGCGCCTTCAT+AGG + Chr4:46644423-46644442 MsG0480020704.01.T01:intron 55.0%
! AGGTGCCATGGGGACATTGA+AGG - Chr4:46645771-46645790 None:intergenic 55.0%
! ATCGGCCTGTGTTGGTGTGA+AGG - Chr4:46646280-46646299 None:intergenic 55.0%
! ATCGGCTCTCCTGGGATGTT+TGG - Chr4:46644366-46644385 None:intergenic 55.0%
! CCTGTGTTGGTGTGAAGGTG+AGG - Chr4:46646275-46646294 None:intergenic 55.0%
! CGAGTCTTACCAGGTGCCAT+GGG - Chr4:46645782-46645801 None:intergenic 55.0%
! CGTGGTTCATGGGGCTTTTC+AGG + Chr4:46645290-46645309 MsG0480020704.01.T01:CDS 55.0%
! GAGTCTTACCAGGTGCCATG+GGG - Chr4:46645781-46645800 None:intergenic 55.0%
!! CCGTGGTTGGTGACCAGAAA+TGG + Chr4:46645729-46645748 MsG0480020704.01.T01:CDS 55.0%
AAGGTCCGGGGTTCGAATCC+CGG - Chr4:46647108-46647127 None:intergenic 60.0%
ACTCCACCCCCAAACATCCC+AGG + Chr4:46644354-46644373 MsG0480020704.01.T01:intron 60.0%
CGGCTCTCCTGGGATGTTTG+GGG - Chr4:46644364-46644383 None:intergenic 60.0%
GAGAGCAGCCACTGGGACAT+CGG - Chr4:46644384-46644403 None:intergenic 60.0%
GAGGCGGTATAGGAGATGGG+TGG + Chr4:46644992-46645011 MsG0480020704.01.T01:intron 60.0%
GCGAGTCTTACCAGGTGCCA+TGG - Chr4:46645783-46645802 None:intergenic 60.0%
GGCTCTCCTGGGATGTTTGG+GGG - Chr4:46644363-46644382 None:intergenic 60.0%
GTCACCAACCACGGGGAGTT+TGG - Chr4:46645723-46645742 None:intergenic 60.0%
TCTCCTGGGATGTTTGGGGG+TGG - Chr4:46644360-46644379 None:intergenic 60.0%
TTAAGGGAGGGTTTCCCGGG+TGG - Chr4:46644310-46644329 None:intergenic 60.0%
TTCTTCCAGCTCACGGTGCC+AGG + Chr4:46645827-46645846 MsG0480020704.01.T01:CDS 60.0%
! TCTTCCAGCTCACGGTGCCA+GGG + Chr4:46645828-46645847 MsG0480020704.01.T01:CDS 60.0%
!! ACTGGGACATCGGCTCTCCT+GGG - Chr4:46644374-46644393 None:intergenic 60.0%
!! CTCCCTATGAAGGCGCTGAC+CGG - Chr4:46644429-46644448 None:intergenic 60.0%
AGTGGCCGGGATTCGAACCC+CGG + Chr4:46647100-46647119 MsG0480020704.01.T01:intron 65.0%
CAGGAGAGCCGATGTCCCAG+TGG + Chr4:46644373-46644392 MsG0480020704.01.T01:intron 65.0%
CGTCGTCTCGTCCGAGCCAT+GGG - Chr4:46652553-46652572 None:intergenic 65.0%
GGAGGGTTTCCCGGGTGGTT+GGG - Chr4:46644305-46644324 None:intergenic 65.0%
TCGTCGTCTCGTCCGAGCCA+TGG - Chr4:46652554-46652573 None:intergenic 65.0%
TGGCTGAGGCGACACGGCAA+TGG + Chr4:46646324-46646343 MsG0480020704.01.T01:CDS 65.0%
! ATGGCTCGGACGAGACGACG+AGG + Chr4:46652553-46652572 MsG0480020704.01.T01:three_prime_UTR 65.0%
! TGGCTCGGACGAGACGACGA+GGG + Chr4:46652554-46652573 MsG0480020704.01.T01:three_prime_UTR 65.0%
!! CACTGGGACATCGGCTCTCC+TGG - Chr4:46644375-46644394 None:intergenic 65.0%
ACTTGCCACCAGGCAGGCCC+TGG - Chr4:46645848-46645867 None:intergenic 70.0%
GGGAGGGTTTCCCGGGTGGT+TGG - Chr4:46644306-46644325 None:intergenic 70.0%
CAGGCCCTGGCACCGTGAGC+TGG - Chr4:46645835-46645854 None:intergenic 75.0%
! TCACGGTGCCAGGGCCTGCC+TGG + Chr4:46645837-46645856 MsG0480020704.01.T01:CDS 75.0%
!! CGGTGCCAGGGCCTGCCTGG+TGG + Chr4:46645840-46645859 MsG0480020704.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 46643442 46652779 46643442 ID=MsG0480020704.01;Name=MsG0480020704.01
Chr4 mRNA 46643442 46652779 46643442 ID=MsG0480020704.01.T01;Parent=MsG0480020704.01;Name=MsG0480020704.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0.78|0.73|0.93|1|1|15|380|414
Chr4 exon 46643442 46643443 46643442 ID=MsG0480020704.01.T01:exon:7239;Parent=MsG0480020704.01.T01
Chr4 exon 46643763 46643889 46643763 ID=MsG0480020704.01.T01:exon:7240;Parent=MsG0480020704.01.T01
Chr4 exon 46645239 46645375 46645239 ID=MsG0480020704.01.T01:exon:7241;Parent=MsG0480020704.01.T01
Chr4 exon 46645706 46645865 46645706 ID=MsG0480020704.01.T01:exon:7242;Parent=MsG0480020704.01.T01
Chr4 exon 46646138 46646413 46646138 ID=MsG0480020704.01.T01:exon:7243;Parent=MsG0480020704.01.T01
Chr4 exon 46646521 46646622 46646521 ID=MsG0480020704.01.T01:exon:7244;Parent=MsG0480020704.01.T01
Chr4 exon 46649722 46649849 46649722 ID=MsG0480020704.01.T01:exon:7245;Parent=MsG0480020704.01.T01
Chr4 exon 46650505 46650550 46650505 ID=MsG0480020704.01.T01:exon:7246;Parent=MsG0480020704.01.T01
Chr4 exon 46650894 46650991 46650894 ID=MsG0480020704.01.T01:exon:7247;Parent=MsG0480020704.01.T01
Chr4 exon 46651071 46651118 46651071 ID=MsG0480020704.01.T01:exon:7248;Parent=MsG0480020704.01.T01
Chr4 exon 46652279 46652779 46652279 ID=MsG0480020704.01.T01:exon:7249;Parent=MsG0480020704.01.T01
Chr4 CDS 46643442 46643443 46643442 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46643763 46643889 46643763 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46645239 46645375 46645239 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46645706 46645865 46645706 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46646138 46646413 46646138 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46646521 46646622 46646521 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46649722 46649849 46649722 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46650505 46650550 46650505 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46650894 46650991 46650894 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46651071 46651118 46651071 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 CDS 46652279 46652399 46652279 ID=MsG0480020704.01.T01:cds;Parent=MsG0480020704.01.T01
Chr4 three_prime_UTR 46652400 46652779 46652400 ID=MsG0480020704.01.T01:three_prime_utr;Parent=MsG0480020704.01.T01
Gene Sequence

>MsG0480020704.01.T01

ATGTTGCCTGATGACTTTGTAAAACCAGAGTTTGCGACGGTGAACATTCAGCGCGATCTTTTCTACGGCTATGATACTCTCATGGAGAATGTTTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGACAGAGCCAAGCCTCTTCCATTCAAGATGGATTCACGTGGTTCATGGGGCTTTTCAGGAGCTAATGAAGGGAACCCGCGGATCAGTTCCAAATTTATTGCACCATGTTATTATATTAACAAGATTGAGATCGATACCAAACTCCCCGTGGTTGGTGACCAGAAATGGGTAATATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATCGTTTGCAGTGCCCGAAATTTCTTCCAGCTCACGGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTCCTAGATGGTATGAACATTGGACTTCAAACAAGGTATATGACGGTGACATGATTGTACTTCAAGGTCAAGAGAAAATCTTTCTCGCAGAAACCGAGAATGGCGGTGACATTAACAAACAGTACACAAGCCTCACCTTCACACCAACACAGGCCGATCGCTTTGTGTTGGCATTTAGAAATTGGCTGAGGCGACACGGCAATGGCCAACCTGAATGGTTCGGCAAGAGCAGCAGCCAGCCATTGCCTTCAACCGTACTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACACTAAAGTGTTCAGCTTGTAAAGGAGCTTATGAGGGATTCCAACAACAACAACAACGCCTTATCCCACTAAGTGGGATTATATTGAAGGAAGATATTGTTGATGTTGGAAAGAAAGGTGAACTTCTTGATGTCAAGGCTGGATTTTTCAGAAATTATTTGTTTCCAAGTGGCAAAGCTCAGATTGCAACTGCTGATTTGCTTAAGGAATTGAAGATAGAGGAAGAAAGAATTGAGGCTGAGAAACAACGGGTAAAAGAAGAGGCACTGCAACTTGCTCAAATTTTGGAATCAGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATCTTCGGAAGTGTTACGGCTCAAGATCTTGTTGACATTATCAAGGCACAGCTTCAAAGGGAGGTGGACAAGAGAATTGTTGAACTTCCTGAGATCAGGGAAACAGGAGAATATATTGCAGAGTTAAAACTTCACCCTGAGGTCACAGCTAAAGTGAAAGTGAATGTATTGGCTAACTGA

Protein sequence

>MsG0480020704.01.T01

MLPDDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPRISSKFIAPCYYINKIEIDTKLPVVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQLTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETENGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQPEWFGKSSSQPLPSTVLSKRQMLDRFEQHTLKCSACKGAYEGFQQQQQRLIPLSGIILKEDIVDVGKKGELLDVKAGFFRNYLFPSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILESVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLHPEVTAKVKVNVLAN*