Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040240 | XP_013469782.1 | 97.583 | 1779 | 43 | 0 | 1 | 1779 | 1 | 1779 | 0.0 | 3474 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040240 | sp|Q9LUI2|NET1A_ARATH | 44.389 | 1791 | 900 | 19 | 1 | 1768 | 1 | 1718 | 0.0 | 1262 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003700 | Msa0040240 | 0.821348 | 4.234294e-53 | -8.615850e-47 |
Msa0007480 | Msa0040240 | 0.824579 | 7.478485e-54 | -8.615850e-47 |
Msa0027230 | Msa0040240 | 0.800351 | 1.501481e-48 | -8.615850e-47 |
Msa0040240 | Msa0069330 | 0.815368 | 9.582160e-52 | -8.615850e-47 |
Msa0040240 | Msa0074350 | 0.808422 | 3.121403e-50 | -8.615850e-47 |
Msa0040240 | Msa0075220 | 0.832591 | 8.661616e-56 | -8.615850e-47 |
Msa0040240 | Msa0076250 | 0.800274 | 1.556405e-48 | -8.615850e-47 |
Msa0040240 | Msa0087940 | 0.860180 | 2.472896e-63 | -8.615850e-47 |
Msa0040240 | Msa0104550 | 0.811770 | 5.928382e-51 | -8.615850e-47 |
Msa0040240 | Msa0110970 | 0.816467 | 5.446836e-52 | -8.615850e-47 |
Msa0040240 | Msa0118570 | 0.824141 | 9.481413e-54 | -8.615850e-47 |
Msa0040240 | Msa0122970 | 0.804264 | 2.348478e-49 | -8.615850e-47 |
Msa0040240 | Msa0124280 | 0.817842 | 2.673750e-52 | -8.615850e-47 |
Msa0040240 | Msa0134610 | 0.832056 | 1.175287e-55 | -8.615850e-47 |
Msa0040240 | Msa0146260 | 0.815778 | 7.766494e-52 | -8.615850e-47 |
Msa0040240 | Msa0150570 | 0.813691 | 2.252282e-51 | -8.615850e-47 |
Msa0040240 | Msa0167520 | 0.810935 | 9.000944e-51 | -8.615850e-47 |
Msa0040240 | Msa0197420 | 0.825899 | 3.644659e-54 | -8.615850e-47 |
Msa0040240 | Msa0206840 | 0.835424 | 1.691500e-56 | -8.615850e-47 |
Msa0040240 | Msa0239190 | 0.814187 | 1.750350e-51 | -8.615850e-47 |
Msa0040240 | Msa0239570 | 0.819086 | 1.396736e-52 | -8.615850e-47 |
Msa0040240 | Msa0255090 | 0.836811 | 7.519965e-57 | -8.615850e-47 |
Msa0040240 | Msa0259380 | 0.841931 | 3.522448e-58 | -8.615850e-47 |
Msa0040240 | Msa0261340 | 0.805319 | 1.413668e-49 | -8.615850e-47 |
Msa0040240 | Msa0277180 | 0.831040 | 2.090916e-55 | -8.615850e-47 |
Msa0040240 | Msa0292400 | 0.817015 | 4.105982e-52 | -8.615850e-47 |
Msa0040240 | Msa0294160 | 0.834234 | 3.371350e-56 | -8.615850e-47 |
Msa0040240 | Msa0300690 | 0.802028 | 6.812935e-49 | -8.615850e-47 |
Msa0040240 | Msa0302170 | 0.850055 | 2.173853e-60 | -8.615850e-47 |
Msa0040240 | Msa0316810 | 0.834152 | 3.535230e-56 | -8.615850e-47 |
Msa0040240 | Msa0363070 | 0.805894 | 1.070959e-49 | -8.615850e-47 |
Msa0040240 | Msa0395820 | 0.810022 | 1.417341e-50 | -8.615850e-47 |
Msa0040240 | Msa0405710 | 0.841398 | 4.868040e-58 | -8.615850e-47 |
Msa0040240 | Msa0410650 | 0.809853 | 1.540908e-50 | -8.615850e-47 |
Msa0040240 | Msa0417880 | 0.824780 | 6.703854e-54 | -8.615850e-47 |
Msa0040240 | Msa0424790 | 0.803701 | 3.074611e-49 | -8.615850e-47 |
Msa0040240 | Msa0430260 | 0.808524 | 2.968765e-50 | -8.615850e-47 |
Msa0040240 | Msa0475790 | 0.857994 | 1.117001e-62 | -8.615850e-47 |
Msa0040240 | Msa0487630 | 0.806713 | 7.196318e-50 | -8.615850e-47 |
Msa0040240 | Msa0507680 | 0.813035 | 3.138143e-51 | -8.615850e-47 |
Msa0040240 | Msa0513160 | 0.802351 | 5.846660e-49 | -8.615850e-47 |
Msa0040240 | Msa0524500 | 0.800130 | 1.665098e-48 | -8.615850e-47 |
Msa0040240 | Msa0527860 | 0.809736 | 1.633032e-50 | -8.615850e-47 |
Msa0040240 | Msa0532070 | 0.827513 | 1.501371e-54 | -8.615850e-47 |
Msa0040240 | Msa0557070 | 0.805753 | 1.146470e-49 | -8.615850e-47 |
Msa0040240 | Msa0574890 | 0.831106 | 2.014571e-55 | -8.615850e-47 |
Msa0040240 | Msa0586190 | 0.802522 | 5.391578e-49 | -8.615850e-47 |
Msa0040240 | Msa0600930 | 0.805684 | 1.185360e-49 | -8.615850e-47 |
Msa0040240 | Msa0637560 | 0.808376 | 3.193100e-50 | -8.615850e-47 |
Msa0040240 | Msa0643080 | 0.801054 | 1.078932e-48 | -8.615850e-47 |
Msa0040240 | Msa0643300 | 0.836335 | 9.939141e-57 | -8.615850e-47 |
Msa0040240 | Msa0683570 | 0.869734 | 2.479365e-66 | -8.615850e-47 |
Msa0040240 | Msa0689230 | 0.814921 | 1.204123e-51 | -8.615850e-47 |
Msa0040240 | Msa0724910 | 0.844127 | 9.164135e-59 | -8.615850e-47 |
Msa0040240 | Msa0738040 | 0.814684 | 1.359235e-51 | -8.615850e-47 |
Msa0040240 | Msa0742740 | 0.827733 | 1.329043e-54 | -8.615850e-47 |
Msa0040240 | Msa0749220 | 0.821758 | 3.404625e-53 | -8.615850e-47 |
Msa0040240 | Msa0780250 | 0.839262 | 1.760369e-57 | -8.615850e-47 |
Msa0040240 | Msa0823820 | 0.836229 | 1.057732e-56 | -8.615850e-47 |
Msa0040240 | Msa0863010 | 0.834178 | 3.483427e-56 | -8.615850e-47 |
Msa0040240 | Msa0869780 | 0.809437 | 1.893560e-50 | -8.615850e-47 |
Msa0040240 | Msa0880780 | 0.802274 | 6.064899e-49 | -8.615850e-47 |
Msa0040240 | Msa0896540 | 0.822344 | 2.491516e-53 | -8.615850e-47 |
Msa0040240 | Msa0930780 | 0.801294 | 9.634714e-49 | -8.615850e-47 |
Msa0040240 | Msa0936410 | 0.804273 | 2.337823e-49 | -8.615850e-47 |
Msa0040240 | Msa0945110 | 0.808539 | 2.947701e-50 | -8.615850e-47 |
Msa0040240 | Msa0961690 | 0.807187 | 5.712977e-50 | -8.615850e-47 |
Msa0040240 | Msa1019430 | 0.803001 | 4.294125e-49 | -8.615850e-47 |
Msa0040240 | Msa1019470 | 0.814870 | 1.235842e-51 | -8.615850e-47 |
Msa0040240 | Msa1021210 | 0.802119 | 6.526381e-49 | -8.615850e-47 |
Msa0040240 | Msa1034780 | 0.814077 | 1.850940e-51 | -8.615850e-47 |
Msa0040240 | Msa1045140 | 0.813506 | 2.473550e-51 | -8.615850e-47 |
Msa0040240 | Msa1063950 | 0.816232 | 6.149595e-52 | -8.615850e-47 |
Msa0040240 | Msa1074810 | 0.800525 | 1.383710e-48 | -8.615850e-47 |
Msa0040240 | Msa1078170 | 0.800259 | 1.567379e-48 | -8.615850e-47 |
Msa0040240 | Msa1085200 | 0.803238 | 3.834797e-49 | -8.615850e-47 |
Msa0040240 | Msa1091520 | 0.810810 | 9.578404e-51 | -8.615850e-47 |
Msa0040240 | Msa1093840 | 0.807587 | 4.699842e-50 | -8.615850e-47 |
Msa0040240 | Msa1125940 | 0.822255 | 2.611700e-53 | -8.615850e-47 |
Msa0040240 | Msa1196440 | 0.822418 | 2.394655e-53 | -8.615850e-47 |
Msa0040240 | Msa1199570 | 0.804285 | 2.324213e-49 | -8.615850e-47 |
Msa0040240 | Msa1200570 | 0.803533 | 3.331216e-49 | -8.615850e-47 |
Msa0040240 | Msa1218550 | 0.800440 | 1.439646e-48 | -8.615850e-47 |
Msa0040240 | Msa1251160 | 0.802852 | 4.607861e-49 | -8.615850e-47 |
Msa0040240 | Msa1252190 | 0.819891 | 9.150773e-53 | -8.615850e-47 |
Msa0040240 | Msa1276660 | 0.804547 | 2.049607e-49 | -8.615850e-47 |
Msa0040240 | Msa1292830 | 0.804296 | 2.312979e-49 | -8.615850e-47 |
Msa0040240 | Msa1303250 | 0.821638 | 3.629750e-53 | -8.615850e-47 |
Msa0040240 | Msa1308140 | 0.800506 | 1.395852e-48 | -8.615850e-47 |
Msa0040240 | Msa1328710 | 0.807765 | 4.308813e-50 | -8.615850e-47 |
Msa0040240 | Msa1358220 | 0.809380 | 1.947055e-50 | -8.615850e-47 |
Msa0040240 | Msa1361400 | 0.802701 | 4.951301e-49 | -8.615850e-47 |
Msa0040240 | Msa1374040 | 0.818273 | 2.136205e-52 | -8.615850e-47 |
Msa0040240 | Msa1374550 | 0.819833 | 9.434920e-53 | -8.615850e-47 |
Msa0040240 | Msa1436570 | 0.804399 | 2.201023e-49 | -8.615850e-47 |
Msa0040240 | Msa1440880 | 0.807492 | 4.921878e-50 | -8.615850e-47 |
Msa0040240 | Msa1445190 | 0.801152 | 1.030329e-48 | -8.615850e-47 |
Msa0040240 | Msa1446810 | 0.824582 | 7.464140e-54 | -8.615850e-47 |
Msa0040240 | Msa1451160 | 0.802595 | 5.207174e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040240 | MtrunA17_Chr1g0204981 | 97.583 | 1779 | 43 | 0 | 1 | 1779 | 1 | 1779 | 0.0 | 3474 |
Msa0040240 | MtrunA17_Chr5g0394641 | 57.948 | 1793 | 609 | 15 | 1 | 1779 | 1 | 1662 | 0.0 | 1804 |
Msa0040240 | MtrunA17_Chr1g0185241 | 40.423 | 1796 | 1001 | 16 | 2 | 1755 | 4 | 1772 | 0.0 | 1097 |
Msa0040240 | MtrunA17_Chr7g0260161 | 43.454 | 1077 | 577 | 4 | 1 | 1045 | 1 | 1077 | 0.0 | 760 |
Msa0040240 | MtrunA17_Chr7g0260161 | 33.285 | 691 | 389 | 17 | 1113 | 1759 | 1072 | 1734 | 1.63e-74 | 276 |
Msa0040240 | MtrunA17_Chr5g0432781 | 58.915 | 129 | 41 | 2 | 8 | 134 | 16 | 134 | 3.66e-41 | 162 |
Msa0040240 | MtrunA17_Chr5g0412211 | 55.906 | 127 | 49 | 1 | 4 | 130 | 1 | 120 | 7.19e-40 | 162 |
Msa0040240 | MtrunA17_Chr5g0427501 | 31.683 | 303 | 184 | 7 | 4 | 302 | 1 | 284 | 2.47e-35 | 147 |
Msa0040240 | MtrunA17_Chr8g0367521 | 46.970 | 132 | 67 | 1 | 4 | 135 | 1 | 129 | 5.47e-35 | 146 |
Msa0040240 | MtrunA17_Chr3g0132861 | 33.333 | 270 | 135 | 7 | 22 | 261 | 14 | 268 | 3.19e-26 | 117 |
Msa0040240 | MtrunA17_Chr7g0268631 | 53.846 | 91 | 39 | 2 | 14 | 101 | 53 | 143 | 7.24e-26 | 111 |
Msa0040240 | MtrunA17_Chr1g0196081 | 58.228 | 79 | 32 | 1 | 15 | 92 | 17 | 95 | 2.21e-24 | 109 |
Msa0040240 | MtrunA17_Chr3g0107891 | 50.515 | 97 | 36 | 2 | 36 | 130 | 15 | 101 | 4.56e-21 | 99.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0040240 | AT3G22790.1 | 44.389 | 1791 | 900 | 19 | 1 | 1768 | 1 | 1718 | 0.0 | 1262 |
Msa0040240 | AT3G22790.3 | 44.389 | 1791 | 900 | 19 | 1 | 1768 | 1 | 1718 | 0.0 | 1262 |
Msa0040240 | AT3G22790.2 | 44.389 | 1791 | 900 | 19 | 1 | 1768 | 1 | 1718 | 0.0 | 1262 |
Msa0040240 | AT4G14760.4 | 42.017 | 1785 | 947 | 21 | 1 | 1774 | 1 | 1708 | 0.0 | 1160 |
Msa0040240 | AT4G14760.2 | 42.017 | 1785 | 947 | 21 | 1 | 1774 | 1 | 1708 | 0.0 | 1160 |
Msa0040240 | AT4G14760.3 | 42.017 | 1785 | 947 | 21 | 1 | 1774 | 1 | 1708 | 0.0 | 1160 |
Msa0040240 | AT4G14760.1 | 42.017 | 1785 | 947 | 21 | 1 | 1774 | 1 | 1708 | 0.0 | 1160 |
Msa0040240 | AT1G03080.3 | 36.930 | 1798 | 1034 | 16 | 1 | 1769 | 1 | 1727 | 0.0 | 985 |
Msa0040240 | AT1G03080.1 | 36.930 | 1798 | 1034 | 16 | 1 | 1769 | 1 | 1727 | 0.0 | 985 |
Msa0040240 | AT1G03080.2 | 36.930 | 1798 | 1034 | 16 | 1 | 1769 | 1 | 1727 | 0.0 | 985 |
Msa0040240 | AT4G02710.1 | 44.007 | 559 | 290 | 3 | 1 | 539 | 1 | 556 | 6.83e-133 | 444 |
Msa0040240 | AT4G02710.1 | 28.543 | 501 | 243 | 17 | 1287 | 1768 | 700 | 1104 | 1.27e-33 | 142 |
Msa0040240 | AT1G58215.1 | 39.583 | 240 | 129 | 6 | 4 | 233 | 1 | 234 | 4.78e-40 | 162 |
Msa0040240 | AT2G22560.1 | 39.608 | 255 | 129 | 8 | 4 | 249 | 1 | 239 | 3.71e-39 | 159 |
Msa0040240 | AT2G30500.2 | 67.416 | 89 | 29 | 0 | 9 | 97 | 17 | 105 | 2.68e-36 | 146 |
Msa0040240 | AT2G30500.1 | 67.416 | 89 | 29 | 0 | 9 | 97 | 17 | 105 | 2.68e-36 | 146 |
Msa0040240 | AT2G30500.3 | 67.416 | 89 | 29 | 0 | 9 | 97 | 16 | 104 | 2.98e-36 | 146 |
Msa0040240 | AT5G10500.1 | 37.021 | 235 | 116 | 7 | 4 | 227 | 1 | 214 | 3.23e-36 | 150 |
Msa0040240 | AT1G09720.1 | 35.168 | 327 | 166 | 9 | 4 | 313 | 1 | 298 | 4.81e-36 | 149 |
Msa0040240 | AT5G58320.1 | 27.586 | 435 | 228 | 13 | 14 | 374 | 22 | 443 | 9.58e-26 | 114 |
Msa0040240 | AT5G58320.4 | 27.586 | 435 | 228 | 13 | 14 | 374 | 22 | 443 | 9.58e-26 | 114 |
Msa0040240 | AT2G47920.2 | 61.333 | 75 | 28 | 1 | 15 | 88 | 10 | 84 | 1.54e-25 | 107 |
Msa0040240 | AT2G47920.1 | 61.333 | 75 | 28 | 1 | 15 | 88 | 10 | 84 | 1.54e-25 | 107 |
Msa0040240 | AT5G58320.5 | 28.431 | 510 | 280 | 16 | 14 | 462 | 22 | 507 | 3.59e-24 | 109 |
Msa0040240 | AT5G58320.2 | 28.431 | 510 | 280 | 16 | 14 | 462 | 22 | 507 | 3.59e-24 | 109 |
Msa0040240 | AT1G03470.2 | 59.459 | 74 | 29 | 1 | 15 | 87 | 8 | 81 | 1.28e-23 | 103 |
Msa0040240 | AT1G03470.3 | 59.459 | 74 | 29 | 1 | 15 | 87 | 8 | 81 | 1.28e-23 | 103 |
Msa0040240 | AT1G03470.1 | 59.459 | 74 | 29 | 1 | 15 | 87 | 8 | 81 | 1.28e-23 | 103 |
Msa0040240 | AT1G03470.4 | 59.459 | 74 | 29 | 1 | 15 | 87 | 8 | 81 | 1.28e-23 | 103 |
Msa0040240 | AT5G58320.3 | 70.492 | 61 | 18 | 0 | 36 | 96 | 1 | 61 | 1.49e-20 | 97.4 |
Msa0040240 | AT4G03153.1 | 37.179 | 78 | 44 | 2 | 15 | 87 | 7 | 84 | 7.70e-12 | 67.4 |
Find 347 sgRNAs with CRISPR-Local
Find 502 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCATCAGCGATCCATTT+TGG | 0.122286 | 1_1:+70308545 | None:intergenic |
AGATTGAGCTTGAAGGTTTA+AGG | 0.151368 | 1_1:-70310969 | Msa0040240:CDS |
TGAAAGAAAGAGAGAGAAAA+TGG | 0.160704 | 1_1:-70314872 | Msa0040240:five_prime_UTR |
CCTTCTGCTGTTCCACTTCC+TGG | 0.171583 | 1_1:+70309324 | None:intergenic |
TGAATCCCGATTGGCAAATT+TGG | 0.182419 | 1_1:-70310686 | Msa0040240:CDS |
ATTCTTTCTCCTGCAATTCT+TGG | 0.209819 | 1_1:+70308486 | None:intergenic |
GAAATCAGAAAATTCAAAAT+AGG | 0.212613 | 1_1:-70310406 | Msa0040240:CDS |
TGAAGCATTGTTGGAAAATA+AGG | 0.219565 | 1_1:-70309192 | Msa0040240:CDS |
CGAAAGTATGCAGAAGTTAT+TGG | 0.239206 | 1_1:-70311031 | Msa0040240:CDS |
CGAATAGGATGTAGCATTTC+GGG | 0.242371 | 1_1:+70312758 | None:intergenic |
TAAATTGTCATTTGCATGTT+TGG | 0.246853 | 1_1:+70309622 | None:intergenic |
ATGCTTCTGCCATGGTTCTA+TGG | 0.249737 | 1_1:+70312858 | None:intergenic |
ACAGATGCCGCAAAACATTT+AGG | 0.263270 | 1_1:+70311327 | None:intergenic |
ACGATGGGATGCTTGAATTA+TGG | 0.264738 | 1_1:-70308453 | Msa0040240:CDS |
TGGCTTCAGGAAAATCTTAC+AGG | 0.266167 | 1_1:-70313600 | Msa0040240:intron |
GAACACAAATCTTATGTTTC+AGG | 0.268278 | 1_1:-70309975 | Msa0040240:CDS |
TCTTGAAAAGATATCTGTTT+TGG | 0.270049 | 1_1:-70312156 | Msa0040240:CDS |
ACTCCAGGCGCTTATATTCT+TGG | 0.273170 | 1_1:-70313659 | Msa0040240:CDS |
GGACCTGGAACTTTCCAAAA+AGG | 0.288134 | 1_1:-70311616 | Msa0040240:CDS |
ATTATAATTACTATTGTTAG+AGG | 0.289390 | 1_1:-70315141 | Msa0040240:five_prime_UTR |
ACATCCTATTCGTGCATTCT+TGG | 0.293446 | 1_1:-70312747 | Msa0040240:CDS |
GCTGACATTGCCAGATTTCA+TGG | 0.293770 | 1_1:-70314804 | Msa0040240:five_prime_UTR |
GGAGGTTCTTCGTATGAAAT+TGG | 0.294862 | 1_1:-70310008 | Msa0040240:CDS |
TCAACTAATTTCATGAGTTC+TGG | 0.310054 | 1_1:+70312950 | None:intergenic |
GCTCATCATTCAAACTTGAT+AGG | 0.310501 | 1_1:+70311172 | None:intergenic |
TTACACATTCCCTTATCTTA+AGG | 0.315206 | 1_1:-70315094 | Msa0040240:five_prime_UTR |
AACAAATGAATTTCAACTTT+GGG | 0.318954 | 1_1:-70309264 | Msa0040240:CDS |
TTTAGAGAGTTTATCTGAAA+AGG | 0.329387 | 1_1:-70312492 | Msa0040240:CDS |
TTTGATGCTGGACGGCGTTT+CGG | 0.329810 | 1_1:-70308749 | Msa0040240:CDS |
TCAAGTGTTAGCGGCTCTTC+AGG | 0.330225 | 1_1:-70310377 | Msa0040240:CDS |
TTCCAACAATGCTTCACTAA+TGG | 0.330646 | 1_1:+70309199 | None:intergenic |
CAAGGCCTGGATTCATTATC+AGG | 0.333099 | 1_1:-70313759 | Msa0040240:five_prime_UTR |
GCTTTACTGTTGTTATTTGC+TGG | 0.337869 | 1_1:-70313708 | Msa0040240:five_prime_UTR |
GACAGAAAGAGTCAGTCTTC+TGG | 0.338161 | 1_1:-70309096 | Msa0040240:CDS |
CTGCCATGGTTCTATGGGCT+TGG | 0.338242 | 1_1:+70312864 | None:intergenic |
TTCTGAATTGTTTAAGCTGC+TGG | 0.342235 | 1_1:-70314160 | Msa0040240:five_prime_UTR |
GATTGAGCTTGAAGGTTTAA+GGG | 0.342560 | 1_1:-70310968 | Msa0040240:CDS |
CTCCTCTGCAAGGTTAATCT+TGG | 0.343462 | 1_1:+70312130 | None:intergenic |
TCGTGAAAAGTCGAAGGATA+TGG | 0.343709 | 1_1:-70311232 | Msa0040240:CDS |
CACTCTTGTTGGTGAGAAAT+CGG | 0.345092 | 1_1:-70311082 | Msa0040240:CDS |
TAATAGATACCGGGCTATAC+TGG | 0.346314 | 1_1:-70311376 | Msa0040240:CDS |
CCAAAGCTTTATTTGTTTGA+AGG | 0.349435 | 1_1:+70308979 | None:intergenic |
GCTCAGACTCAGAATGGTTC+TGG | 0.350226 | 1_1:+70312612 | None:intergenic |
GCAAGATTTGAAAATGAAAA+TGG | 0.350755 | 1_1:-70308149 | Msa0040240:CDS |
GAAAGTTAAGTTTGAACTAC+TGG | 0.352419 | 1_1:-70310101 | Msa0040240:CDS |
CGATGGGATGCTTGAATTAT+GGG | 0.355901 | 1_1:-70308452 | Msa0040240:CDS |
GATTCACCGTGTAGTTCTTC+AGG | 0.359638 | 1_1:-70312803 | Msa0040240:CDS |
TAACAACAGTAAAGCTGGTT+TGG | 0.360869 | 1_1:+70313716 | None:intergenic |
CTCCTGCAATTCTTGGAGGC+TGG | 0.361351 | 1_1:+70308493 | None:intergenic |
GAGCATGCTGGTATCTCAAT+TGG | 0.364239 | 1_1:-70310875 | Msa0040240:CDS |
TGGAGAACAAAATCCCAAAA+TGG | 0.364333 | 1_1:-70308559 | Msa0040240:CDS |
CCTGAACACCTCTTCAGAAT+TGG | 0.366934 | 1_1:-70308311 | Msa0040240:CDS |
ATCCATTAGTGAAGCATTGT+TGG | 0.367186 | 1_1:-70309201 | Msa0040240:CDS |
AGAACTTCATGCTTTGCTTT+CGG | 0.368358 | 1_1:-70310746 | Msa0040240:CDS |
GTCTTCATTAGTTCTCTTTG+AGG | 0.368667 | 1_1:+70307706 | None:intergenic |
GAAGGAGATCAAAGAGAATC+TGG | 0.368743 | 1_1:-70311484 | Msa0040240:CDS |
TCAACAGTTCAGAAGTTTCA+TGG | 0.368995 | 1_1:+70311946 | None:intergenic |
GAAAGAAAGAGAGAGAAAAT+GGG | 0.369384 | 1_1:-70314871 | Msa0040240:five_prime_UTR |
AACAGGAGCTTGGTCTGTTA+AGG | 0.369843 | 1_1:-70309724 | Msa0040240:CDS |
TATTTGTTACCAGAAGATAT+TGG | 0.370090 | 1_1:-70314125 | Msa0040240:five_prime_UTR |
ACATGAATCTCATCAAATAA+AGG | 0.372032 | 1_1:-70311418 | Msa0040240:CDS |
ACGAATAGGATGTAGCATTT+CGG | 0.377831 | 1_1:+70312757 | None:intergenic |
CTCTTTGATCTCCTTCAACT+TGG | 0.378935 | 1_1:+70311491 | None:intergenic |
TTCTTTCTCATCATTCAATT+CGG | 0.382327 | 1_1:+70312037 | None:intergenic |
CCTTTGTCGTGTCTCCTGTC+TGG | 0.382670 | 1_1:+70310349 | None:intergenic |
TTTGCTAATTAGGAGTGTTT+CGG | 0.384283 | 1_1:-70309921 | Msa0040240:CDS |
GGTGTGCGTGGCTCAGCCTC+AGG | 0.384728 | 1_1:+70312779 | None:intergenic |
ATCCAGCCTCCAAGAATTGC+AGG | 0.389082 | 1_1:-70308495 | Msa0040240:CDS |
TATGTTATCTTTGACTCAAC+TGG | 0.391052 | 1_1:-70312297 | Msa0040240:CDS |
CCTTCAAACAAATAAAGCTT+TGG | 0.393761 | 1_1:-70308979 | Msa0040240:CDS |
GGAGCAAAGGTCTCTTGCTT+TGG | 0.393833 | 1_1:-70311667 | Msa0040240:CDS |
ACAGACCAAGCTCCTGTTTG+AGG | 0.395160 | 1_1:+70309729 | None:intergenic |
ACTGGAGATGAACAGGCAAC+TGG | 0.395779 | 1_1:-70310083 | Msa0040240:CDS |
ATTCTCCAAATTTGCCAATC+GGG | 0.396088 | 1_1:+70310681 | None:intergenic |
AAACAAATGAATTTCAACTT+TGG | 0.397234 | 1_1:-70309265 | Msa0040240:CDS |
GGCGCTTATATTCTTGGTGG+TGG | 0.399627 | 1_1:-70313653 | Msa0040240:CDS |
TTAGCCCAAAGAATTCAAAA+TGG | 0.400360 | 1_1:-70313620 | Msa0040240:CDS |
CAATAACTTCTGCATACTTT+CGG | 0.401198 | 1_1:+70311032 | None:intergenic |
CCAATTCTGAAGAGGTGTTC+AGG | 0.402773 | 1_1:+70308311 | None:intergenic |
TGCCATCAGTCGGATAATTC+AGG | 0.405000 | 1_1:-70308340 | Msa0040240:CDS |
GCAGCAAAAGGCGCAGCAAA+GGG | 0.405712 | 1_1:-70307742 | Msa0040240:CDS |
ATTGGAGGTAGAAAAGGAAT+TGG | 0.407788 | 1_1:-70308293 | Msa0040240:CDS |
GTTGTTATTTGCTGGTGTTA+TGG | 0.408035 | 1_1:-70313700 | Msa0040240:exon |
TGCTTCTGCCATGGTTCTAT+GGG | 0.408861 | 1_1:+70312859 | None:intergenic |
CTTTCTCCTGCAATTCTTGG+AGG | 0.409513 | 1_1:+70308489 | None:intergenic |
TTGTAAAGTACTTCTTACTT+TGG | 0.409704 | 1_1:-70307658 | Msa0040240:three_prime_UTR |
GATGTACAGAAAGATGTGTT+AGG | 0.410740 | 1_1:-70312716 | Msa0040240:CDS |
CTACCTCCATCTGTTGCATA+AGG | 0.412136 | 1_1:+70310443 | None:intergenic |
TCAAATAAAGGATGAGATCA+AGG | 0.415790 | 1_1:-70311406 | Msa0040240:CDS |
ATTGGAGAAGAACGCCTTGC+TGG | 0.416071 | 1_1:-70311013 | Msa0040240:CDS |
AGTCATTAGTTCTTTGAAAG+AGG | 0.417912 | 1_1:-70309027 | Msa0040240:CDS |
GTAGTGTATCCTTAAGATAA+GGG | 0.419021 | 1_1:+70315085 | None:intergenic |
AAATCAGAAAATTCAAAATA+GGG | 0.419060 | 1_1:-70310405 | Msa0040240:CDS |
GACACAGCTCCAATATCTTC+TGG | 0.419910 | 1_1:+70314116 | None:intergenic |
ACCTTGCAGAGGAGAATTCC+AGG | 0.420999 | 1_1:-70312121 | Msa0040240:CDS |
AGAATCTGAAGGAAAAGAAC+TGG | 0.423760 | 1_1:-70310188 | Msa0040240:CDS |
GAGAGATATAATCATGCAAC+AGG | 0.423955 | 1_1:-70312896 | Msa0040240:CDS |
TGAATGCTAAGATTATATTT+CGG | 0.424961 | 1_1:+70315180 | None:intergenic |
TTGAACTACTGGAGATGAAC+AGG | 0.425409 | 1_1:-70310090 | Msa0040240:CDS |
ATTTGGAGAATCTTGTTCTT+CGG | 0.426695 | 1_1:-70310669 | Msa0040240:CDS |
AATAATATTGAGGGCTTGAA+AGG | 0.427270 | 1_1:-70310289 | Msa0040240:CDS |
AGCTTAAACAATTCAGAAAC+AGG | 0.429152 | 1_1:+70314165 | None:intergenic |
CGCCAGGCTCGAAGCTGATA+AGG | 0.431455 | 1_1:-70312207 | Msa0040240:CDS |
TTGAAGGATGGTGTGCTCTA+AGG | 0.432047 | 1_1:+70308995 | None:intergenic |
AATAAGGTGAATGAGCTTAC+CGG | 0.434391 | 1_1:-70309176 | Msa0040240:CDS |
AGCATGCTGGTATCTCAATT+GGG | 0.434503 | 1_1:-70310874 | Msa0040240:CDS |
ATTATGGGAAACCGCTGAAC+AGG | 0.434609 | 1_1:-70308437 | Msa0040240:CDS |
AGCAGCAAAAGGCGCAGCAA+AGG | 0.435278 | 1_1:-70307743 | Msa0040240:CDS |
CACCACAAAACCATGAAATC+TGG | 0.444135 | 1_1:+70314794 | None:intergenic |
TTCAGAATTGGAGGTAGAAA+AGG | 0.444205 | 1_1:-70308299 | Msa0040240:CDS |
ATAAGGATGCTGGTCTTCTT+CGG | 0.446959 | 1_1:-70312190 | Msa0040240:CDS |
GATTCTCCAAATTTGCCAAT+CGG | 0.450050 | 1_1:+70310680 | None:intergenic |
AGATCGAACTCGAAGCCTTA+AGG | 0.451763 | 1_1:-70312574 | Msa0040240:CDS |
AATGGAAATTTCCAAGTTGA+AGG | 0.453078 | 1_1:-70311502 | Msa0040240:CDS |
CAGGGAGACTTCGGTGGAGT+TGG | 0.455032 | 1_1:-70307975 | Msa0040240:CDS |
AGCAAAGCAGAAATTGAAAT+CGG | 0.456811 | 1_1:-70312416 | Msa0040240:CDS |
TGTAGTGTATCCTTAAGATA+AGG | 0.456864 | 1_1:+70315084 | None:intergenic |
GAACGTGTTCAAATCTGAAA+TGG | 0.457094 | 1_1:-70310029 | Msa0040240:CDS |
AAAGGGAAGAACAAATTCTC+TGG | 0.457819 | 1_1:-70307818 | Msa0040240:CDS |
GAGAGAAAATGGGGTAAGGA+AGG | 0.459074 | 1_1:-70314861 | Msa0040240:five_prime_UTR |
CTTCAAGAAGAGCGTCAGTT+GGG | 0.462527 | 1_1:-70310646 | Msa0040240:CDS |
ACAGGAGCTTGGTCTGTTAA+GGG | 0.462782 | 1_1:-70309723 | Msa0040240:CDS |
TGCTCCAAGAATGCACGAAT+AGG | 0.462800 | 1_1:+70312743 | None:intergenic |
AAAGAATTCAAAATGGCTTC+AGG | 0.463859 | 1_1:-70313613 | Msa0040240:CDS |
TAAACACGGGCTTCAGCTGT+TGG | 0.465169 | 1_1:-70311640 | Msa0040240:CDS |
CTTGCAGAAAATATCTTCAA+TGG | 0.465499 | 1_1:-70311988 | Msa0040240:CDS |
AGCTTTGGCTGTATGCAATC+AGG | 0.466092 | 1_1:-70308964 | Msa0040240:CDS |
AGGCGCAGCAAAGGGTGCTT+CGG | 0.466937 | 1_1:-70307734 | Msa0040240:CDS |
GCTTCAGCTGTTGGAGGACC+TGG | 0.468056 | 1_1:-70311631 | Msa0040240:CDS |
CTAAAATCTGAGAAGGATAC+AGG | 0.468087 | 1_1:-70312368 | Msa0040240:CDS |
AGTCTTCTGGAAAGTGAAAT+CGG | 0.468255 | 1_1:-70309083 | Msa0040240:CDS |
AGTTCAGTACAACCAGTGTC+TGG | 0.468579 | 1_1:-70312342 | Msa0040240:CDS |
CGAAAAGGTTCGGAAGAGAT+AGG | 0.469088 | 1_1:-70307908 | Msa0040240:CDS |
CGAGAAAGTTATTTCCGAGT+TGG | 0.470448 | 1_1:-70310476 | Msa0040240:CDS |
CAACTCGGAAATAACTTTCT+CGG | 0.474244 | 1_1:+70310477 | None:intergenic |
TCAAAGATAACATAGCTTCA+AGG | 0.476855 | 1_1:+70312306 | None:intergenic |
GTGATAGAGCAGGCACGAAA+AGG | 0.477623 | 1_1:-70307923 | Msa0040240:CDS |
GAAAATGGGTTCTTGTATTG+TGG | 0.477933 | 1_1:+70314931 | None:intergenic |
GATTCAAAGATTGAGCTTGA+AGG | 0.477954 | 1_1:-70310976 | Msa0040240:CDS |
TACAATGGACAAAGATCTGC+AGG | 0.478455 | 1_1:-70309648 | Msa0040240:CDS |
TACGAATAATAACCTCAAAC+AGG | 0.480222 | 1_1:-70309741 | Msa0040240:CDS |
AATTGCAGGAGAAAGAATAG+AGG | 0.480249 | 1_1:-70308481 | Msa0040240:CDS |
ATCCTTATCAGCTTCGAGCC+TGG | 0.480729 | 1_1:+70312205 | None:intergenic |
AGAAGAAATGCAACATATTG+TGG | 0.481196 | 1_1:-70311586 | Msa0040240:CDS |
GTTTGAGGTTATTATTCGTA+CGG | 0.483532 | 1_1:+70309744 | None:intergenic |
GACCTTAAAAGATCAGCAAA+TGG | 0.484884 | 1_1:-70311520 | Msa0040240:CDS |
TTGACTCAACTGGATGCAAA+GGG | 0.485509 | 1_1:-70312287 | Msa0040240:CDS |
CTCATCATTCAAACTTGATA+GGG | 0.485568 | 1_1:+70311173 | None:intergenic |
GCAAATAACAACAGTAAAGC+TGG | 0.485863 | 1_1:+70313711 | None:intergenic |
GCCTCAAGCAAGAACTCGCC+AGG | 0.485907 | 1_1:-70312223 | Msa0040240:CDS |
TGCAGACTCCTTTGCAAGAA+GGG | 0.487837 | 1_1:-70312996 | Msa0040240:CDS |
GTCTGAAGTTAAAGCGTTGA+GGG | 0.488632 | 1_1:-70312069 | Msa0040240:CDS |
GACGGCGTTTCGGATTTGAT+AGG | 0.489182 | 1_1:-70308739 | Msa0040240:CDS |
GTGTTAGGTTTAAGCAGAAA+GGG | 0.489359 | 1_1:-70312701 | Msa0040240:CDS |
TTGGAGGTAGAAAAGGAATT+GGG | 0.489619 | 1_1:-70308292 | Msa0040240:CDS |
AACATTGAGTTCAGAACTGA+TGG | 0.490673 | 1_1:-70309291 | Msa0040240:CDS |
CAACAGTTCAGAAGTTTCAT+GGG | 0.491516 | 1_1:+70311947 | None:intergenic |
TGATAGGGAACATTGCATAA+AGG | 0.491874 | 1_1:+70311188 | None:intergenic |
AAGGGCTAAATCAAGTAGCT+TGG | 0.493873 | 1_1:-70310950 | Msa0040240:CDS |
AAGAAGAGAGGCCACAAGAA+GGG | 0.494838 | 1_1:-70308121 | Msa0040240:CDS |
TACTTCTATTTGCTTCATTG+AGG | 0.496659 | 1_1:+70309372 | None:intergenic |
AGAGTGTTCCGTCTTCAAGC+AGG | 0.497192 | 1_1:-70307994 | Msa0040240:CDS |
TGTGTTAGGTTTAAGCAGAA+AGG | 0.497544 | 1_1:-70312702 | Msa0040240:CDS |
ATCTGTGATGGATTTACAAA+AGG | 0.497599 | 1_1:-70311310 | Msa0040240:CDS |
AAGAGAGAGAAAATGGGGTA+AGG | 0.498989 | 1_1:-70314865 | Msa0040240:five_prime_UTR |
GTCTTCAAGCAGGGAGACTT+CGG | 0.499506 | 1_1:-70307984 | Msa0040240:CDS |
TCTGCAAGGACTGCTTGTAC+AGG | 0.500587 | 1_1:+70312003 | None:intergenic |
GTTGGGAAATGCTTCTGCCA+TGG | 0.502762 | 1_1:+70312850 | None:intergenic |
GTGTGCGTGGCTCAGCCTCA+GGG | 0.502876 | 1_1:+70312780 | None:intergenic |
AATTTGCTCAGTTAGCATCC+TGG | 0.503033 | 1_1:+70312103 | None:intergenic |
CAAATGACAATTTAAGTCAT+CGG | 0.505804 | 1_1:-70309613 | Msa0040240:CDS |
AGGGCTTGAATAATAGATAC+CGG | 0.506174 | 1_1:-70311386 | Msa0040240:CDS |
TTGCTTTGATGACGGTTCAA+TGG | 0.507374 | 1_1:-70308413 | Msa0040240:CDS |
GCCTGGCGAGTTCTTGCTTG+AGG | 0.507836 | 1_1:+70312222 | None:intergenic |
ATTTCAACTTTGGGAGGCTG+AGG | 0.509421 | 1_1:-70309255 | Msa0040240:CDS |
CTGCTAATGCACGGTATGCT+CGG | 0.513789 | 1_1:+70312918 | None:intergenic |
CGCAGCAAAGGGTGCTTCGG+CGG | 0.513845 | 1_1:-70307731 | Msa0040240:CDS |
AGAGCAGGCACGAAAAGGTT+CGG | 0.515127 | 1_1:-70307918 | Msa0040240:CDS |
AGACAGATAGAAGACGTTGA+AGG | 0.515615 | 1_1:-70308070 | Msa0040240:CDS |
GAACACCTCTTCAGAATTGG+AGG | 0.516110 | 1_1:-70308308 | Msa0040240:CDS |
CTCTTCAGGTCGATCCAGAC+AGG | 0.516132 | 1_1:-70310363 | Msa0040240:CDS |
CACATAATAACGTCTTCGGT+TGG | 0.516270 | 1_1:+70308361 | None:intergenic |
TGTATGCAATCAGGAACAAA+AGG | 0.516662 | 1_1:-70308955 | Msa0040240:intron |
AATAACCTCAAACAGGAGCT+TGG | 0.516913 | 1_1:-70309734 | Msa0040240:CDS |
ATGGCACATAATAACGTCTT+CGG | 0.517675 | 1_1:+70308357 | None:intergenic |
GAAAGTTATTTCCGAGTTGG+AGG | 0.519057 | 1_1:-70310473 | Msa0040240:CDS |
GAAAATGGGGTAAGGAAGGA+AGG | 0.519509 | 1_1:-70314857 | Msa0040240:five_prime_UTR |
AGATTCTTGCTGCGAAAGTA+CGG | 0.519748 | 1_1:+70310204 | None:intergenic |
CTGGAGATGAACAGGCAACT+GGG | 0.520477 | 1_1:-70310082 | Msa0040240:CDS |
AGCTTTATTTGTTTGAAGGA+TGG | 0.520968 | 1_1:+70308983 | None:intergenic |
AAAGGAGAACTCAAAACTAA+AGG | 0.521388 | 1_1:-70311292 | Msa0040240:CDS |
ACAAGAGTAGTAGCAGCAAA+AGG | 0.523053 | 1_1:-70307754 | Msa0040240:CDS |
CCAGGCGCTTATATTCTTGG+TGG | 0.523777 | 1_1:-70313656 | Msa0040240:CDS |
GATAGGACGGTTGCAGTTCG+AGG | 0.524134 | 1_1:-70307891 | Msa0040240:CDS |
AATAGAAAATAATTTGATGC+TGG | 0.525309 | 1_1:-70308761 | Msa0040240:CDS |
TTCTACCTCCAATTCTGAAG+AGG | 0.525511 | 1_1:+70308303 | None:intergenic |
CTTGCTTTGGAGCTTAAACA+CGG | 0.525710 | 1_1:-70311654 | Msa0040240:CDS |
TTCGGATTTGATAGGCATGA+AGG | 0.526170 | 1_1:-70308731 | Msa0040240:CDS |
TCTGTTAAGGGAACAGTTTG+AGG | 0.527391 | 1_1:-70309711 | Msa0040240:CDS |
CAGATTCTTGAATTATCTGA+AGG | 0.527696 | 1_1:-70309425 | Msa0040240:CDS |
AGAGGAAAAGCTAAAGGCCG+TGG | 0.530443 | 1_1:-70309537 | Msa0040240:CDS |
AACCATTCTGAGTCTGAGCA+TGG | 0.532984 | 1_1:-70312608 | Msa0040240:CDS |
AACTCTTCTGATACTGAAGA+AGG | 0.534095 | 1_1:+70312513 | None:intergenic |
AAGAACTGGATTCCAAGAAA+AGG | 0.534437 | 1_1:-70310174 | Msa0040240:CDS |
ACACGGGCTTCAGCTGTTGG+AGG | 0.535438 | 1_1:-70311637 | Msa0040240:CDS |
GAGATTATTACACCAGGAAG+TGG | 0.536242 | 1_1:-70309336 | Msa0040240:CDS |
CCCCATGCTCAGACTCAGAA+TGG | 0.539320 | 1_1:+70312606 | None:intergenic |
AATTGAAATCGGAATATTGA+CGG | 0.539343 | 1_1:-70312405 | Msa0040240:CDS |
TGGTTGGTGAAGCAATGAAA+AGG | 0.540717 | 1_1:-70308393 | Msa0040240:CDS |
CCACCAAGAATATAAGCGCC+TGG | 0.540982 | 1_1:+70313656 | None:intergenic |
CCATGTTGCATTCTGACTCC+AGG | 0.541469 | 1_1:-70313674 | Msa0040240:CDS |
AGTTTGAATGATGAGCTAGA+TGG | 0.541628 | 1_1:-70311165 | Msa0040240:CDS |
TATACACTGATAGCAAGGCC+TGG | 0.543131 | 1_1:-70313772 | Msa0040240:five_prime_UTR |
CAGCACCAGTGTTATGTTGA+CGG | 0.544733 | 1_1:-70314982 | Msa0040240:five_prime_UTR |
TCAATTTCAGCAAAACATAG+TGG | 0.544803 | 1_1:+70307858 | None:intergenic |
AAATGAATTTCAACTTTGGG+AGG | 0.544982 | 1_1:-70309261 | Msa0040240:CDS |
CGAAGCCTTAAGGAAAACTC+TGG | 0.545062 | 1_1:-70312564 | Msa0040240:CDS |
CTCGAAGCTGATAAGGATGC+TGG | 0.545738 | 1_1:-70312200 | Msa0040240:CDS |
AGCACCAGTGTTATGTTGAC+GGG | 0.547120 | 1_1:-70314981 | Msa0040240:five_prime_UTR |
AGCAGAGAATGTTTATCTGA+AGG | 0.548440 | 1_1:-70309681 | Msa0040240:CDS |
GGAGCTGTGTCTAATTGAGC+AGG | 0.548819 | 1_1:-70314104 | Msa0040240:intron |
AATGATCAAGCTTATTGAAG+AGG | 0.551108 | 1_1:-70313020 | Msa0040240:CDS |
ATGCAGACTCCTTTGCAAGA+AGG | 0.552193 | 1_1:-70312997 | Msa0040240:CDS |
TCTTTCAAAGAACTAATGAC+TGG | 0.552225 | 1_1:+70309029 | None:intergenic |
TTGTCTGATATTTGATCAAG+AGG | 0.553686 | 1_1:+70308517 | None:intergenic |
TTTGATGACGGTTCAATGGT+TGG | 0.554901 | 1_1:-70308409 | Msa0040240:CDS |
AAAGAAGAGAGGCCACAAGA+AGG | 0.555362 | 1_1:-70308122 | Msa0040240:CDS |
GAAAATAATTTGATGCTGGA+CGG | 0.555521 | 1_1:-70308757 | Msa0040240:CDS |
AGCTCTCGTAAACCAAGCTA+AGG | 0.556072 | 1_1:+70309825 | None:intergenic |
TAGCTATCCTTTCCAGACAC+TGG | 0.557351 | 1_1:+70312330 | None:intergenic |
ACCATTCTGAGTCTGAGCAT+GGG | 0.558288 | 1_1:-70312607 | Msa0040240:CDS |
TTTGACTCAACTGGATGCAA+AGG | 0.558341 | 1_1:-70312288 | Msa0040240:CDS |
TTATTTGATGAGATTCATGT+AGG | 0.559697 | 1_1:+70311421 | None:intergenic |
CGGTGTCGACTCCCTTCTTG+TGG | 0.560287 | 1_1:+70308110 | None:intergenic |
TGCAAAGGGGCATGATGAGA+GGG | 0.560372 | 1_1:-70312273 | Msa0040240:CDS |
ACTGGGGTCTGAACTGACCG+AGG | 0.561086 | 1_1:-70310065 | Msa0040240:CDS |
TTGATGTTAGGTAAAAGAAG+AGG | 0.562055 | 1_1:-70313800 | Msa0040240:intron |
AGAATAGAGGGACTGACGAT+GGG | 0.562122 | 1_1:-70308468 | Msa0040240:CDS |
CTAAGGGACTTCATTCACAT+AGG | 0.562287 | 1_1:-70307779 | Msa0040240:CDS |
AGAAGCATAATGAGTTTGAG+AGG | 0.562799 | 1_1:-70311782 | Msa0040240:CDS |
CTGGGGTCTGAACTGACCGA+GGG | 0.563096 | 1_1:-70310064 | Msa0040240:CDS |
ATTAAAGACAGAACTCAAGA+TGG | 0.563109 | 1_1:-70308241 | Msa0040240:CDS |
AGAGTCATGCCATGTTCTGA+AGG | 0.563654 | 1_1:-70311115 | Msa0040240:CDS |
CTGGAAGATCTAGAGTCTGT+AGG | 0.563818 | 1_1:-70311357 | Msa0040240:CDS |
CTAGATCTTCCAGTATAGCC+CGG | 0.563826 | 1_1:+70311367 | None:intergenic |
GCTTCAAGAAGAGCGTCAGT+TGG | 0.565247 | 1_1:-70310647 | Msa0040240:CDS |
TTGCTTTGGAGCTTAAACAC+GGG | 0.565458 | 1_1:-70311653 | Msa0040240:CDS |
GAACAGGATTGCTTTGATGA+CGG | 0.566967 | 1_1:-70308421 | Msa0040240:CDS |
AAAGAAAGAGAGAGAAAATG+GGG | 0.567346 | 1_1:-70314870 | Msa0040240:five_prime_UTR |
AAGTGAAATCGGAGGACTGA+AGG | 0.568749 | 1_1:-70309072 | Msa0040240:CDS |
GCGCTTATATTCTTGGTGGT+GGG | 0.569371 | 1_1:-70313652 | Msa0040240:CDS |
GACTTGGAGCAAAAGAACTC+AGG | 0.569887 | 1_1:-70310544 | Msa0040240:CDS |
ATTTGATAGGCATGAAGGCA+AGG | 0.570814 | 1_1:-70308726 | Msa0040240:CDS |
CTCAGTCACAAGAGGAGCAA+AGG | 0.574044 | 1_1:-70311680 | Msa0040240:CDS |
TATTTATTCTCATCATGAGA+TGG | 0.574371 | 1_1:-70307420 | Msa0040240:three_prime_UTR |
CATCTCCGCCCTTCTTGCAA+AGG | 0.574812 | 1_1:+70312988 | None:intergenic |
AGAAAGCAAAGTCAATCAAG+TGG | 0.575439 | 1_1:-70310770 | Msa0040240:CDS |
CGATTTCTCACCAACAAGAG+TGG | 0.577575 | 1_1:+70311083 | None:intergenic |
TTGAAGTCTCGTACAAACTC+CGG | 0.578072 | 1_1:+70309157 | None:intergenic |
AGAAGAGCGTCAGTTGGGGA+AGG | 0.578142 | 1_1:-70310641 | Msa0040240:CDS |
TTTGATGAGATTCATGTAGG+AGG | 0.578154 | 1_1:+70311424 | None:intergenic |
CCATTCTGAGTCTGAGCATG+GGG | 0.578255 | 1_1:-70312606 | Msa0040240:CDS |
ATTGCAGGAGAAAGAATAGA+GGG | 0.580346 | 1_1:-70308480 | Msa0040240:CDS |
GGAAAATCGCAAGGTGCTTG+AGG | 0.580735 | 1_1:-70309951 | Msa0040240:CDS |
CACAAATCTTATGTTTCAGG+AGG | 0.581618 | 1_1:-70309972 | Msa0040240:CDS |
TGAAAACCTTATGCAACAGA+TGG | 0.581760 | 1_1:-70310449 | Msa0040240:CDS |
CCAGGAAGTGGAACAGCAGA+AGG | 0.581851 | 1_1:-70309324 | Msa0040240:CDS |
CGTTATTATGTGCCATCAGT+CGG | 0.581919 | 1_1:-70308350 | Msa0040240:CDS |
CAAATAAAGGATGAGATCAA+GGG | 0.581995 | 1_1:-70311405 | Msa0040240:CDS |
TGCTTAATTTCTCTTCCACT+AGG | 0.582068 | 1_1:-70311542 | Msa0040240:CDS |
TCTTAACGAAAGGAGCATGC+TGG | 0.586908 | 1_1:-70310887 | Msa0040240:CDS |
GAAGGAGTCGGTTAGTACAA+TGG | 0.588149 | 1_1:-70309663 | Msa0040240:CDS |
TATGTAATTGAAACATGTCT+CGG | 0.589723 | 1_1:-70308805 | Msa0040240:CDS |
CTCGTACTCTCAGTCACAAG+AGG | 0.589840 | 1_1:-70311688 | Msa0040240:CDS |
CGACAAAGGGTTCAAGCAAG+AGG | 0.590636 | 1_1:-70310335 | Msa0040240:CDS |
GAGTGTTCCGTCTTCAAGCA+GGG | 0.591001 | 1_1:-70307993 | Msa0040240:CDS |
AAGAATAGAGGGACTGACGA+TGG | 0.591259 | 1_1:-70308469 | Msa0040240:CDS |
TAGAGTAGTTGAAAGATGCA+TGG | 0.591291 | 1_1:-70308701 | Msa0040240:CDS |
CGTGTTCAAATCTGAAATGG+AGG | 0.591654 | 1_1:-70310026 | Msa0040240:CDS |
TACCTGAATTATCCGACTGA+TGG | 0.591828 | 1_1:+70308338 | None:intergenic |
AAAGTTATTTCCGAGTTGGA+GGG | 0.592755 | 1_1:-70310472 | Msa0040240:CDS |
CTCTGCGTTCAACATTTCCA+CGG | 0.592869 | 1_1:+70309520 | None:intergenic |
TTGAAGAGAGAAATTGAGCT+AGG | 0.592951 | 1_1:-70311927 | Msa0040240:CDS |
GTGAAGATCACTCAGATGCT+CGG | 0.594055 | 1_1:+70309766 | None:intergenic |
AAAGTCCTGATAATGAATCC+AGG | 0.595114 | 1_1:+70313754 | None:intergenic |
ATGCAAAGGGGCATGATGAG+AGG | 0.596545 | 1_1:-70312274 | Msa0040240:CDS |
AGAAATTGAAAGACGTGTCA+AGG | 0.598274 | 1_1:-70308674 | Msa0040240:CDS |
AAATCAATCTCTTCAACTAG+AGG | 0.598798 | 1_1:-70311853 | Msa0040240:CDS |
TCCTGGAATTCTCCTCTGCA+AGG | 0.598910 | 1_1:+70312120 | None:intergenic |
AGCTCTTCGTGAAAAGTCGA+AGG | 0.600288 | 1_1:-70311238 | Msa0040240:CDS |
CGGAGATGTACTATAAGAAG+AGG | 0.602444 | 1_1:-70312973 | Msa0040240:CDS |
GAATGTTTATCTGAAGGAGT+CGG | 0.603192 | 1_1:-70309675 | Msa0040240:CDS |
TTCAAGAAGAGCGTCAGTTG+GGG | 0.603422 | 1_1:-70310645 | Msa0040240:CDS |
AAGGCACAAAACATTGCTGA+AGG | 0.603725 | 1_1:-70312455 | Msa0040240:CDS |
ATGACACTCTTATGAAAGCA+TGG | 0.604223 | 1_1:-70307471 | Msa0040240:three_prime_UTR |
TGTAGCATTTCGGGTGTGCG+TGG | 0.604312 | 1_1:+70312767 | None:intergenic |
AGCAGAGCTAAAATCTGAGA+AGG | 0.605333 | 1_1:-70312375 | Msa0040240:CDS |
AGGGATTCATCAAGTGTTAG+CGG | 0.606002 | 1_1:-70310386 | Msa0040240:CDS |
AAAAGTAGAGAAGCAACTCA+AGG | 0.608016 | 1_1:-70308608 | Msa0040240:CDS |
AGTGAAATCGGAGGACTGAA+GGG | 0.609084 | 1_1:-70309071 | Msa0040240:CDS |
CAGACAGGAGACACGACAAA+GGG | 0.610505 | 1_1:-70310348 | Msa0040240:CDS |
GAAGTCTCCCTGCTTGAAGA+CGG | 0.614140 | 1_1:+70307986 | None:intergenic |
AATATTGGAGAGGCTTGCAT+CGG | 0.614747 | 1_1:-70308206 | Msa0040240:CDS |
ACACTCAAGTGAATCCCGAT+TGG | 0.615103 | 1_1:-70310695 | Msa0040240:CDS |
TACTAATGATCAACTGACAA+AGG | 0.617633 | 1_1:-70308026 | Msa0040240:CDS |
AGAACTCATGAAATTAGTTG+AGG | 0.618745 | 1_1:-70312948 | Msa0040240:CDS |
AGTCGACACCGAATACGAAA+CGG | 0.619203 | 1_1:-70308098 | Msa0040240:CDS |
AAACCTTATGCAACAGATGG+AGG | 0.619590 | 1_1:-70310446 | Msa0040240:CDS |
AGTGCAGTCTTCTTAACGAA+AGG | 0.621794 | 1_1:-70310897 | Msa0040240:CDS |
AGTACAACCAGTGTCTGGAA+AGG | 0.622377 | 1_1:-70312337 | Msa0040240:CDS |
AGTAGTTGAAAGATGCATGG+TGG | 0.622793 | 1_1:-70308698 | Msa0040240:CDS |
TTCAAGCAGGGAGACTTCGG+TGG | 0.624271 | 1_1:-70307981 | Msa0040240:CDS |
AGTCTGAAGTTAAAGCGTTG+AGG | 0.626894 | 1_1:-70312070 | Msa0040240:CDS |
TATATCTCTCTGCTAATGCA+CGG | 0.627276 | 1_1:+70312909 | None:intergenic |
CTTTCGCAGCAAGAATCTGA+AGG | 0.629887 | 1_1:-70310199 | Msa0040240:CDS |
ATCAAAGCAATCCTGTTCAG+CGG | 0.631141 | 1_1:+70308426 | None:intergenic |
GTTTCAGGAGGAAAATCGCA+AGG | 0.631529 | 1_1:-70309960 | Msa0040240:CDS |
GGAGAACTCAAAACTAAAGG+AGG | 0.632027 | 1_1:-70311289 | Msa0040240:CDS |
GCATGCTGGTATCTCAATTG+GGG | 0.634170 | 1_1:-70310873 | Msa0040240:CDS |
AGATCTATACACTGATAGCA+AGG | 0.635625 | 1_1:-70313777 | Msa0040240:five_prime_UTR |
GCTGCGAAAGTACGGTGAGG+AGG | 0.636044 | 1_1:+70310212 | None:intergenic |
ATTCTGAGTCTGAGCATGGG+GGG | 0.646893 | 1_1:-70312604 | Msa0040240:CDS |
TCATCGGATTCAAAGTTCAG+AGG | 0.648992 | 1_1:-70309597 | Msa0040240:CDS |
GTCCAAGATTAACCTTGCAG+AGG | 0.653260 | 1_1:-70312132 | Msa0040240:CDS |
TGGAGATGAACAGGCAACTG+GGG | 0.654239 | 1_1:-70310081 | Msa0040240:CDS |
CCTGGAGTCAGAATGCAACA+TGG | 0.654796 | 1_1:+70313674 | None:intergenic |
GGGCTTGAATAATAGATACC+GGG | 0.655254 | 1_1:-70311385 | Msa0040240:CDS |
TGGGGTCTGAACTGACCGAG+GGG | 0.655592 | 1_1:-70310063 | Msa0040240:CDS |
CCAGACAGGAGACACGACAA+AGG | 0.657280 | 1_1:-70310349 | Msa0040240:CDS |
AAAATGGAGACAAAGAAGAG+AGG | 0.660154 | 1_1:-70308133 | Msa0040240:CDS |
ATGACCCGTCAACATAACAC+TGG | 0.662494 | 1_1:+70314977 | None:intergenic |
ACATGTTCGATCTCAACACA+TGG | 0.666722 | 1_1:-70308579 | Msa0040240:CDS |
AGAGATGAGATTATTACACC+AGG | 0.667678 | 1_1:-70309342 | Msa0040240:CDS |
AAGGTTCGGAAGAGATAGGA+CGG | 0.668081 | 1_1:-70307904 | Msa0040240:CDS |
GGCAGATATACAGTGTGACA+AGG | 0.668694 | 1_1:-70312543 | Msa0040240:CDS |
GGGGTCTGAACTGACCGAGG+GGG | 0.669733 | 1_1:-70310062 | Msa0040240:CDS |
AGACAGAGACTTCTCCAGCA+AGG | 0.676837 | 1_1:+70310999 | None:intergenic |
GTGTAGTTCTTCAGGCCCTG+AGG | 0.685214 | 1_1:-70312795 | Msa0040240:CDS |
ACGCCAAGCCCATAGAACCA+TGG | 0.688547 | 1_1:-70312867 | Msa0040240:CDS |
AATTGAAAGACGTGTCAAGG+AGG | 0.694522 | 1_1:-70308671 | Msa0040240:CDS |
CATTCTGAGTCTGAGCATGG+GGG | 0.695670 | 1_1:-70312605 | Msa0040240:CDS |
AGACTCCTTTGCAAGAAGGG+CGG | 0.696638 | 1_1:-70312993 | Msa0040240:CDS |
TGACTCAACTGGATGCAAAG+GGG | 0.703551 | 1_1:-70312286 | Msa0040240:CDS |
CTTGCTGCGAAAGTACGGTG+AGG | 0.737992 | 1_1:+70310209 | None:intergenic |
TCAGGGCCTGAAGAACTACA+CGG | 0.748914 | 1_1:+70312797 | None:intergenic |
CTTCTGGAAAGTGAAATCGG+AGG | 0.758748 | 1_1:-70309080 | Msa0040240:CDS |
GAGCAGTGTGATGTTCCATG+AGG | 0.800540 | 1_1:-70309864 | Msa0040240:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAATCAAG+TGG | + | chr1_1:70308260-70308279 | None:intergenic | 10.0% |
!! | ATTATAATTACTATTGTTAG+AGG | - | chr1_1:70307463-70307482 | Msa0040240:three_prime_UTR | 15.0% |
!!! | AAAAAAAAATATGTTGTTTC+TGG | + | chr1_1:70308157-70308176 | None:intergenic | 15.0% |
!!! | CAACATATTTTTTTTTGTTT+TGG | - | chr1_1:70308161-70308180 | Msa0040240:CDS | 15.0% |
!! | AACTGAAAAAAGAAAAAAAA+AGG | + | chr1_1:70308417-70308436 | None:intergenic | 15.0% |
!!! | CTATTTTTATTTTGAAAACA+CGG | + | chr1_1:70308702-70308721 | None:intergenic | 15.0% |
!! | ACATAAAATCATCATTTAAA+AGG | + | chr1_1:70309523-70309542 | None:intergenic | 15.0% |
!! | AAATCAGAAAATTCAAAATA+GGG | - | chr1_1:70312199-70312218 | Msa0040240:CDS | 15.0% |
!!! | CATATTTTGAATAATATTGA+GGG | - | chr1_1:70312306-70312325 | Msa0040240:CDS | 15.0% |
!!! | AAATTATTTTCTATTACACT+TGG | + | chr1_1:70313838-70313857 | None:intergenic | 15.0% |
!! | TGAATGCTAAGATTATATTT+CGG | + | chr1_1:70307427-70307446 | None:intergenic | 20.0% |
!!! | AATGTTTTGTTTAGATTTAG+AGG | + | chr1_1:70307576-70307595 | None:intergenic | 20.0% |
!! | AAGATCCAAAAAAATGAAAT+GGG | + | chr1_1:70307888-70307907 | None:intergenic | 20.0% |
!!! | TTTTTTGTTTTGGATGAAAA+AGG | - | chr1_1:70308171-70308190 | Msa0040240:CDS | 20.0% |
!! | AAGAAATATATTACTAGCAT+TGG | + | chr1_1:70308237-70308256 | None:intergenic | 20.0% |
!! | AGTTATATACTCTATTAACA+TGG | + | chr1_1:70308540-70308559 | None:intergenic | 20.0% |
!! | AATAGAGTATATAACTTTCA+AGG | - | chr1_1:70308544-70308563 | Msa0040240:CDS | 20.0% |
!!! | TGTGTTTTTTTATTGATGTT+AGG | - | chr1_1:70308792-70308811 | Msa0040240:CDS | 20.0% |
!!! | TTTTTAAATCTGTAACAAAC+AGG | - | chr1_1:70309215-70309234 | Msa0040240:CDS | 20.0% |
!!! | ATTTAGTAAACCTTTTTTCT+AGG | + | chr1_1:70311780-70311799 | None:intergenic | 20.0% |
!! | AGAAAAAAGGTTTACTAAAT+TGG | - | chr1_1:70311780-70311799 | Msa0040240:CDS | 20.0% |
!!! | GTTTATTTTGCAAAAATGTA+TGG | - | chr1_1:70312035-70312054 | Msa0040240:CDS | 20.0% |
!! | GAAATCAGAAAATTCAAAAT+AGG | - | chr1_1:70312198-70312217 | Msa0040240:CDS | 20.0% |
!!! | GCATATTTTGAATAATATTG+AGG | - | chr1_1:70312305-70312324 | Msa0040240:CDS | 20.0% |
!! | AAATGTTGAAAAACTGAAAA+TGG | - | chr1_1:70313115-70313134 | Msa0040240:intron | 20.0% |
!! | AAACAAATGAATTTCAACTT+TGG | - | chr1_1:70313339-70313358 | Msa0040240:intron | 20.0% |
!! | AACAAATGAATTTCAACTTT+GGG | - | chr1_1:70313340-70313359 | Msa0040240:intron | 20.0% |
!! | AATAGAAAATAATTTGATGC+TGG | - | chr1_1:70313843-70313862 | Msa0040240:intron | 20.0% |
!!! | TTAATTTTAGCTTGTCAAAA+TGG | - | chr1_1:70315000-70315019 | Msa0040240:five_prime_UTR | 20.0% |
!!! | TAATTTTAGCTTGTCAAAAT+GGG | - | chr1_1:70315001-70315020 | Msa0040240:five_prime_UTR | 20.0% |
!!! | TTTTTCTCTCTCTAGAAAAT+GGG | + | chr1_1:70307690-70307709 | None:intergenic | 25.0% |
!!! | TTTTTTCTCTCTCTAGAAAA+TGG | + | chr1_1:70307691-70307710 | None:intergenic | 25.0% |
! | GAAGATCCAAAAAAATGAAA+TGG | + | chr1_1:70307889-70307908 | None:intergenic | 25.0% |
!!! | TTTGTGTGTTGATTTTTACT+TGG | - | chr1_1:70307911-70307930 | Msa0040240:CDS | 25.0% |
!! | GATTTTTACTTGGTAAGTTT+TGG | - | chr1_1:70307921-70307940 | Msa0040240:CDS | 25.0% |
!!! | TTTTGTTTCACATTCATTGA+AGG | - | chr1_1:70307957-70307976 | Msa0040240:CDS | 25.0% |
! | AGAAGAGAGAAAACTTAAAA+AGG | + | chr1_1:70308102-70308121 | None:intergenic | 25.0% |
!! | TATTTGTTACCAGAAGATAT+TGG | - | chr1_1:70308479-70308498 | Msa0040240:CDS | 25.0% |
! | TAGTAGACATTGAAGATATA+TGG | + | chr1_1:70309037-70309056 | None:intergenic | 25.0% |
!! | TGAGAAAGTGATTTTCATTA+TGG | + | chr1_1:70309154-70309173 | None:intergenic | 25.0% |
!! | CAACAACTTTTGCTTATATT+TGG | + | chr1_1:70309270-70309289 | None:intergenic | 25.0% |
! | TAAGCAAAAGTTGTTGTATT+TGG | - | chr1_1:70309274-70309293 | Msa0040240:CDS | 25.0% |
! | TTATATACTTTCTACAGACA+TGG | - | chr1_1:70309545-70309564 | Msa0040240:CDS | 25.0% |
! | TTTAGAGAGTTTATCTGAAA+AGG | - | chr1_1:70310112-70310131 | Msa0040240:CDS | 25.0% |
! | AAAGGAAAAAGAGCTTAATA+AGG | - | chr1_1:70310130-70310149 | Msa0040240:CDS | 25.0% |
! | AATTGAAATCGGAATATTGA+CGG | - | chr1_1:70310199-70310218 | Msa0040240:CDS | 25.0% |
!! | TCTTGAAAAGATATCTGTTT+TGG | - | chr1_1:70310448-70310467 | Msa0040240:CDS | 25.0% |
! | TTCTTTCTCATCATTCAATT+CGG | + | chr1_1:70310570-70310589 | None:intergenic | 25.0% |
! | TTATTTGATGAGATTCATGT+AGG | + | chr1_1:70311186-70311205 | None:intergenic | 25.0% |
! | ACATGAATCTCATCAAATAA+AGG | - | chr1_1:70311186-70311205 | Msa0040240:CDS | 25.0% |
!! | TTTGAATCCTAAATGTTTTG+CGG | - | chr1_1:70311270-70311289 | Msa0040240:CDS | 25.0% |
! | AACTAAGTAACCTAGAAAAA+AGG | - | chr1_1:70311767-70311786 | Msa0040240:CDS | 25.0% |
! | AAAAAGGTTTACTAAATTGG+AGG | - | chr1_1:70311783-70311802 | Msa0040240:CDS | 25.0% |
! | GGAGGAAAAATATTCTTATA+TGG | - | chr1_1:70311801-70311820 | Msa0040240:CDS | 25.0% |
! | TGAATTTCAAAAACATATCG+AGG | - | chr1_1:70312092-70312111 | Msa0040240:CDS | 25.0% |
!!! | AGGAGAAAAATTTGCTAATT+AGG | - | chr1_1:70312673-70312692 | Msa0040240:CDS | 25.0% |
!! | TAAATTGTCATTTGCATGTT+TGG | + | chr1_1:70312985-70313004 | None:intergenic | 25.0% |
! | CAAATGACAATTTAAGTCAT+CGG | - | chr1_1:70312991-70313010 | Msa0040240:CDS | 25.0% |
! | AAGAGGAAAACTAAAGTATA+TGG | + | chr1_1:70313698-70313717 | None:intergenic | 25.0% |
! | ATGTTTCAATTACATAATCC+TGG | + | chr1_1:70313795-70313814 | None:intergenic | 25.0% |
! | TATGTAATTGAAACATGTCT+CGG | - | chr1_1:70313799-70313818 | Msa0040240:intron | 25.0% |
! | GCAAGATTTGAAAATGAAAA+TGG | - | chr1_1:70314455-70314474 | Msa0040240:intron | 25.0% |
! | AGTGATGAAAAGAAAAACAA+AGG | - | chr1_1:70314768-70314787 | Msa0040240:five_prime_UTR | 25.0% |
! | GTGATGAAAAGAAAAACAAA+GGG | - | chr1_1:70314769-70314788 | Msa0040240:five_prime_UTR | 25.0% |
!! | TTGTAAAGTACTTCTTACTT+TGG | - | chr1_1:70314946-70314965 | Msa0040240:five_prime_UTR | 25.0% |
! | TATTTATTCTCATCATGAGA+TGG | - | chr1_1:70315184-70315203 | Msa0040240:five_prime_UTR | 25.0% |
TTACACATTCCCTTATCTTA+AGG | - | chr1_1:70307510-70307529 | Msa0040240:three_prime_UTR | 30.0% | |
GTAGTGTATCCTTAAGATAA+GGG | + | chr1_1:70307522-70307541 | None:intergenic | 30.0% | |
TGTAGTGTATCCTTAAGATA+AGG | + | chr1_1:70307523-70307542 | None:intergenic | 30.0% | |
TGAAAGAAAGAGAGAGAAAA+TGG | - | chr1_1:70307732-70307751 | Msa0040240:CDS | 30.0% | |
GAAAGAAAGAGAGAGAAAAT+GGG | - | chr1_1:70307733-70307752 | Msa0040240:CDS | 30.0% | |
AAAGAAAGAGAGAGAAAATG+GGG | - | chr1_1:70307734-70307753 | Msa0040240:CDS | 30.0% | |
!!! | TCAAGCCCATTTCATTTTTT+TGG | - | chr1_1:70307880-70307899 | Msa0040240:CDS | 30.0% |
! | GCTGTTCTTATCTAATGTTT+TGG | - | chr1_1:70307990-70308009 | Msa0040240:CDS | 30.0% |
AGCTTAAACAATTCAGAAAC+AGG | + | chr1_1:70308442-70308461 | None:intergenic | 30.0% | |
TATATAACTTTCAAGGTCTC+CGG | - | chr1_1:70308551-70308570 | Msa0040240:CDS | 30.0% | |
TTGATGTTAGGTAAAAGAAG+AGG | - | chr1_1:70308804-70308823 | Msa0040240:CDS | 30.0% | |
TTAGCCCAAAGAATTCAAAA+TGG | - | chr1_1:70308984-70309003 | Msa0040240:CDS | 30.0% | |
!! | GAAGCCATTTTGAATTCTTT+GGG | + | chr1_1:70308991-70309010 | None:intergenic | 30.0% |
!! | TGAAGCCATTTTGAATTCTT+TGG | + | chr1_1:70308992-70309011 | None:intergenic | 30.0% |
AAAGAATTCAAAATGGCTTC+AGG | - | chr1_1:70308991-70309010 | Msa0040240:CDS | 30.0% | |
! | AATACAAACTAGCTTCTGTT+AGG | + | chr1_1:70309125-70309144 | None:intergenic | 30.0% |
! | ACTTTTGCTTATATTTGGAC+CGG | + | chr1_1:70309265-70309284 | None:intergenic | 30.0% |
! | GATGTATCAGGTCTAAAATT+TGG | + | chr1_1:70309301-70309320 | None:intergenic | 30.0% |
!! | TAAGCAAAAGTTGATGTATC+AGG | + | chr1_1:70309313-70309332 | None:intergenic | 30.0% |
!! | CTTTTGCTTATATTTGAGAC+CGG | - | chr1_1:70309323-70309342 | Msa0040240:CDS | 30.0% |
TGTTGTGAAAGTTCATAGTT+TGG | - | chr1_1:70309494-70309513 | Msa0040240:CDS | 30.0% | |
AATGATCAAGCTTATTGAAG+AGG | - | chr1_1:70309584-70309603 | Msa0040240:CDS | 30.0% | |
TCAACTAATTTCATGAGTTC+TGG | + | chr1_1:70309657-70309676 | None:intergenic | 30.0% | |
AGAACTCATGAAATTAGTTG+AGG | - | chr1_1:70309656-70309675 | Msa0040240:CDS | 30.0% | |
! | AGCAGAAAATTTTCTTGGTT+GGG | + | chr1_1:70309774-70309793 | None:intergenic | 30.0% |
AGCAAAGCAGAAATTGAAAT+CGG | - | chr1_1:70310188-70310207 | Msa0040240:CDS | 30.0% | |
TCAAAGATAACATAGCTTCA+AGG | + | chr1_1:70310301-70310320 | None:intergenic | 30.0% | |
TATGTTATCTTTGACTCAAC+TGG | - | chr1_1:70310307-70310326 | Msa0040240:CDS | 30.0% | |
! | CATTGAAGATATTTTCTGCA+AGG | + | chr1_1:70310618-70310637 | None:intergenic | 30.0% |
CTTGCAGAAAATATCTTCAA+TGG | - | chr1_1:70310616-70310635 | Msa0040240:CDS | 30.0% | |
AAATCAATCTCTTCAACTAG+AGG | - | chr1_1:70310751-70310770 | Msa0040240:CDS | 30.0% | |
!!! | TTCTTCTTTGAAACCCTTTT+TGG | + | chr1_1:70311005-70311024 | None:intergenic | 30.0% |
AGAAGAAATGCAACATATTG+TGG | - | chr1_1:70311018-70311037 | Msa0040240:CDS | 30.0% | |
!! | TTCCATTTGCTGATCTTTTA+AGG | + | chr1_1:70311089-70311108 | None:intergenic | 30.0% |
! | AATGGAAATTTCCAAGTTGA+AGG | - | chr1_1:70311102-70311121 | Msa0040240:CDS | 30.0% |
TCAAATAAAGGATGAGATCA+AGG | - | chr1_1:70311198-70311217 | Msa0040240:CDS | 30.0% | |
CAAATAAAGGATGAGATCAA+GGG | - | chr1_1:70311199-70311218 | Msa0040240:CDS | 30.0% | |
!! | ATCTGTGATGGATTTACAAA+AGG | - | chr1_1:70311294-70311313 | Msa0040240:CDS | 30.0% |
AAAGGAGAACTCAAAACTAA+AGG | - | chr1_1:70311312-70311331 | Msa0040240:CDS | 30.0% | |
!! | GGATAAACTTTTGAGTGAAA+AGG | - | chr1_1:70311393-70311412 | Msa0040240:CDS | 30.0% |
CTCATCATTCAAACTTGATA+GGG | + | chr1_1:70311434-70311453 | None:intergenic | 30.0% | |
! | ATTTTTCTTCCTTCAGAACA+TGG | + | chr1_1:70311501-70311520 | None:intergenic | 30.0% |
CAATAACTTCTGCATACTTT+CGG | + | chr1_1:70311575-70311594 | None:intergenic | 30.0% | |
ATTTGGAGAATCTTGTTCTT+CGG | - | chr1_1:70311935-70311954 | Msa0040240:CDS | 30.0% | |
AATAATATTGAGGGCTTGAA+AGG | - | chr1_1:70312315-70312334 | Msa0040240:CDS | 30.0% | |
GAAAGTTAAGTTTGAACTAC+TGG | - | chr1_1:70312503-70312522 | Msa0040240:CDS | 30.0% | |
GAACACAAATCTTATGTTTC+AGG | - | chr1_1:70312629-70312648 | Msa0040240:CDS | 30.0% | |
!! | TTTGCTAATTAGGAGTGTTT+CGG | - | chr1_1:70312683-70312702 | Msa0040240:CDS | 30.0% |
! | GTTTGAGGTTATTATTCGTA+CGG | + | chr1_1:70312863-70312882 | None:intergenic | 30.0% |
TACGAATAATAACCTCAAAC+AGG | - | chr1_1:70312863-70312882 | Msa0040240:CDS | 30.0% | |
AACAGAACTGTTAGAAAAAG+AGG | - | chr1_1:70313049-70313068 | Msa0040240:intron | 30.0% | |
AGAAAAAGAGGAAAAGCTAA+AGG | - | chr1_1:70313061-70313080 | Msa0040240:intron | 30.0% | |
CAGATTCTTGAATTATCTGA+AGG | - | chr1_1:70313179-70313198 | Msa0040240:intron | 30.0% | |
TACTTCTATTTGCTTCATTG+AGG | + | chr1_1:70313235-70313254 | None:intergenic | 30.0% | |
AAATGAATTTCAACTTTGGG+AGG | - | chr1_1:70313343-70313362 | Msa0040240:intron | 30.0% | |
!! | TGAAGCATTGTTGGAAAATA+AGG | - | chr1_1:70313412-70313431 | Msa0040240:intron | 30.0% |
TCTTTCAAAGAACTAATGAC+TGG | + | chr1_1:70313578-70313597 | None:intergenic | 30.0% | |
! | AGTCATTAGTTCTTTGAAAG+AGG | - | chr1_1:70313577-70313596 | Msa0040240:intron | 30.0% |
!! | AGCTTTATTTGTTTGAAGGA+TGG | + | chr1_1:70313624-70313643 | None:intergenic | 30.0% |
!! | CCAAAGCTTTATTTGTTTGA+AGG | + | chr1_1:70313628-70313647 | None:intergenic | 30.0% |
CCTTCAAACAAATAAAGCTT+TGG | - | chr1_1:70313625-70313644 | Msa0040240:CDS | 30.0% | |
GAAAATAATTTGATGCTGGA+CGG | - | chr1_1:70313847-70313866 | Msa0040240:intron | 30.0% | |
! | ACTTTTCTGTAGTCTTTTTG+TGG | + | chr1_1:70313982-70314001 | None:intergenic | 30.0% |
TTGTCTGATATTTGATCAAG+AGG | + | chr1_1:70314090-70314109 | None:intergenic | 30.0% | |
ATTAAAGACAGAACTCAAGA+TGG | - | chr1_1:70314363-70314382 | Msa0040240:intron | 30.0% | |
TGGCAAGAGAAGAAAAATAT+TGG | - | chr1_1:70314383-70314402 | Msa0040240:intron | 30.0% | |
AGAGAAGAAAAATATTGGAG+AGG | - | chr1_1:70314388-70314407 | Msa0040240:intron | 30.0% | |
! | TCTTTTAACCGTTTCGTATT+CGG | + | chr1_1:70314517-70314536 | None:intergenic | 30.0% |
TACTAATGATCAACTGACAA+AGG | - | chr1_1:70314578-70314597 | Msa0040240:intron | 30.0% | |
TCAATTTCAGCAAAACATAG+TGG | + | chr1_1:70314749-70314768 | None:intergenic | 30.0% | |
! | AAAAACAGTGGTGTTTCTAA+GGG | - | chr1_1:70314809-70314828 | Msa0040240:five_prime_UTR | 30.0% |
!!! | TGAGTGACATTTTAGCTATA+AGG | - | chr1_1:70315099-70315118 | Msa0040240:five_prime_UTR | 30.0% |
! | GAAAATGGGTTCTTGTATTG+TGG | + | chr1_1:70307676-70307695 | None:intergenic | 35.0% |
CAAAAATCACACGCATCAAA+TGG | + | chr1_1:70308285-70308304 | None:intergenic | 35.0% | |
TTCTGAATTGTTTAAGCTGC+TGG | - | chr1_1:70308444-70308463 | Msa0040240:CDS | 35.0% | |
! | ATGGACTAACCAACAGAAAT+TGG | + | chr1_1:70308594-70308613 | None:intergenic | 35.0% |
AGATCTATACACTGATAGCA+AGG | - | chr1_1:70308827-70308846 | Msa0040240:intron | 35.0% | |
! | AAAGTCCTGATAATGAATCC+AGG | + | chr1_1:70308853-70308872 | None:intergenic | 35.0% |
TAACAACAGTAAAGCTGGTT+TGG | + | chr1_1:70308891-70308910 | None:intergenic | 35.0% | |
GCAAATAACAACAGTAAAGC+TGG | + | chr1_1:70308896-70308915 | None:intergenic | 35.0% | |
!! | GCTTTACTGTTGTTATTTGC+TGG | - | chr1_1:70308896-70308915 | Msa0040240:intron | 35.0% |
!! | GTTGTTATTTGCTGGTGTTA+TGG | - | chr1_1:70308904-70308923 | Msa0040240:intron | 35.0% |
TAGGAAAGTTCATCTAGCAA+GGG | + | chr1_1:70309106-70309125 | None:intergenic | 35.0% | |
TTAGGAAAGTTCATCTAGCA+AGG | + | chr1_1:70309107-70309126 | None:intergenic | 35.0% | |
AATGTTTGCCTAACCCAAAA+TGG | + | chr1_1:70309358-70309377 | None:intergenic | 35.0% | |
! | AACATTTGAGATCACCATGA+TGG | - | chr1_1:70309372-70309391 | Msa0040240:CDS | 35.0% |
ATGAAATGTGTAGACCATCA+TGG | + | chr1_1:70309389-70309408 | None:intergenic | 35.0% | |
TCTTGAAAAAACAATGCCAC+GGG | + | chr1_1:70309435-70309454 | None:intergenic | 35.0% | |
GTCTTGAAAAAACAATGCCA+CGG | + | chr1_1:70309436-70309455 | None:intergenic | 35.0% | |
TATATCTCTCTGCTAATGCA+CGG | + | chr1_1:70309698-70309717 | None:intergenic | 35.0% | |
GAGAGATATAATCATGCAAC+AGG | - | chr1_1:70309708-70309727 | Msa0040240:CDS | 35.0% | |
! | CAGCAGAAAATTTTCTTGGT+TGG | + | chr1_1:70309775-70309794 | None:intergenic | 35.0% |
! | CAGTCAGCAGAAAATTTTCT+TGG | + | chr1_1:70309779-70309798 | None:intergenic | 35.0% |
ACGAATAGGATGTAGCATTT+CGG | + | chr1_1:70309850-70309869 | None:intergenic | 35.0% | |
GATGTACAGAAAGATGTGTT+AGG | - | chr1_1:70309888-70309907 | Msa0040240:CDS | 35.0% | |
TGTGTTAGGTTTAAGCAGAA+AGG | - | chr1_1:70309902-70309921 | Msa0040240:CDS | 35.0% | |
GTGTTAGGTTTAAGCAGAAA+GGG | - | chr1_1:70309903-70309922 | Msa0040240:CDS | 35.0% | |
AACTCTTCTGATACTGAAGA+AGG | + | chr1_1:70310094-70310113 | None:intergenic | 35.0% | |
CTAAAATCTGAGAAGGATAC+AGG | - | chr1_1:70310236-70310255 | Msa0040240:CDS | 35.0% | |
CAACAGTTCAGAAGTTTCAT+GGG | + | chr1_1:70310660-70310679 | None:intergenic | 35.0% | |
TCAACAGTTCAGAAGTTTCA+TGG | + | chr1_1:70310661-70310680 | None:intergenic | 35.0% | |
TTGAAGAGAGAAATTGAGCT+AGG | - | chr1_1:70310677-70310696 | Msa0040240:CDS | 35.0% | |
AGAAAAACATTGTGACACGT+TGG | - | chr1_1:70310721-70310740 | Msa0040240:CDS | 35.0% | |
! | AGAAGCATAATGAGTTTGAG+AGG | - | chr1_1:70310822-70310841 | Msa0040240:CDS | 35.0% |
TGCTTAATTTCTCTTCCACT+AGG | - | chr1_1:70311062-70311081 | Msa0040240:CDS | 35.0% | |
GACCTTAAAAGATCAGCAAA+TGG | - | chr1_1:70311084-70311103 | Msa0040240:CDS | 35.0% | |
TTTGATGAGATTCATGTAGG+AGG | + | chr1_1:70311183-70311202 | None:intergenic | 35.0% | |
AGGGCTTGAATAATAGATAC+CGG | - | chr1_1:70311218-70311237 | Msa0040240:CDS | 35.0% | |
TGATAGGGAACATTGCATAA+AGG | + | chr1_1:70311419-70311438 | None:intergenic | 35.0% | |
GCTCATCATTCAAACTTGAT+AGG | + | chr1_1:70311435-70311454 | None:intergenic | 35.0% | |
AGTTTGAATGATGAGCTAGA+TGG | - | chr1_1:70311439-70311458 | Msa0040240:CDS | 35.0% | |
GAAGAAAAATCCACTCTTGT+TGG | - | chr1_1:70311511-70311530 | Msa0040240:CDS | 35.0% | |
! | CGAAAGTATGCAGAAGTTAT+TGG | - | chr1_1:70311573-70311592 | Msa0040240:CDS | 35.0% |
GATTCAAAGATTGAGCTTGA+AGG | - | chr1_1:70311628-70311647 | Msa0040240:CDS | 35.0% | |
AGATTGAGCTTGAAGGTTTA+AGG | - | chr1_1:70311635-70311654 | Msa0040240:CDS | 35.0% | |
GATTGAGCTTGAAGGTTTAA+GGG | - | chr1_1:70311636-70311655 | Msa0040240:CDS | 35.0% | |
AGAAAGCAAAGTCAATCAAG+TGG | - | chr1_1:70311834-70311853 | Msa0040240:CDS | 35.0% | |
AGAACTTCATGCTTTGCTTT+CGG | - | chr1_1:70311858-70311877 | Msa0040240:CDS | 35.0% | |
ATTCTCCAAATTTGCCAATC+GGG | + | chr1_1:70311926-70311945 | None:intergenic | 35.0% | |
GATTCTCCAAATTTGCCAAT+CGG | + | chr1_1:70311927-70311946 | None:intergenic | 35.0% | |
GCAAAAATGTATGGAAGACT+TGG | - | chr1_1:70312044-70312063 | Msa0040240:CDS | 35.0% | |
CAACTCGGAAATAACTTTCT+CGG | + | chr1_1:70312130-70312149 | None:intergenic | 35.0% | |
! | AAAGTTATTTCCGAGTTGGA+GGG | - | chr1_1:70312132-70312151 | Msa0040240:CDS | 35.0% |
TGAAAACCTTATGCAACAGA+TGG | - | chr1_1:70312155-70312174 | Msa0040240:CDS | 35.0% | |
AAGAACTGGATTCCAAGAAA+AGG | - | chr1_1:70312430-70312449 | Msa0040240:CDS | 35.0% | |
!!! | TGTTTTGAAACTCATGCTCA+AGG | + | chr1_1:70312458-70312477 | None:intergenic | 35.0% |
GAACGTGTTCAAATCTGAAA+TGG | - | chr1_1:70312575-70312594 | Msa0040240:CDS | 35.0% | |
CACAAATCTTATGTTTCAGG+AGG | - | chr1_1:70312632-70312651 | Msa0040240:CDS | 35.0% | |
GAATCTAAAAAGCCTTAGCT+TGG | - | chr1_1:70312767-70312786 | Msa0040240:CDS | 35.0% | |
AGCAGAGAATGTTTATCTGA+AGG | - | chr1_1:70312923-70312942 | Msa0040240:CDS | 35.0% | |
GAATGTTTATCTGAAGGAGT+CGG | - | chr1_1:70312929-70312948 | Msa0040240:CDS | 35.0% | |
! | TCTCGAGATTTTCATTGATC+AGG | + | chr1_1:70313157-70313176 | None:intergenic | 35.0% |
AGAGATGAGATTATTACACC+AGG | - | chr1_1:70313262-70313281 | Msa0040240:intron | 35.0% | |
AACATTGAGTTCAGAACTGA+TGG | - | chr1_1:70313313-70313332 | Msa0040240:intron | 35.0% | |
!! | ATCCATTAGTGAAGCATTGT+TGG | - | chr1_1:70313403-70313422 | Msa0040240:intron | 35.0% |
TTCCAACAATGCTTCACTAA+TGG | + | chr1_1:70313408-70313427 | None:intergenic | 35.0% | |
AATAAGGTGAATGAGCTTAC+CGG | - | chr1_1:70313428-70313447 | Msa0040240:intron | 35.0% | |
! | AGTCTTCTGGAAAGTGAAAT+CGG | - | chr1_1:70313521-70313540 | Msa0040240:intron | 35.0% |
TGTATGCAATCAGGAACAAA+AGG | - | chr1_1:70313649-70313668 | Msa0040240:CDS | 35.0% | |
TTCATATGCTCATTTAACGC+AGG | + | chr1_1:70313727-70313746 | None:intergenic | 35.0% | |
TGTTTGTCATAAATGTGTCC+AGG | - | chr1_1:70313774-70313793 | Msa0040240:five_prime_UTR | 35.0% | |
TAGAGTAGTTGAAAGATGCA+TGG | - | chr1_1:70313903-70313922 | Msa0040240:intron | 35.0% | |
AGAAATTGAAAGACGTGTCA+AGG | - | chr1_1:70313930-70313949 | Msa0040240:intron | 35.0% | |
! | TCTGTAGTCTTTTTGTGGAT+TGG | + | chr1_1:70313977-70313996 | None:intergenic | 35.0% |
AAAAGTAGAGAAGCAACTCA+AGG | - | chr1_1:70313996-70314015 | Msa0040240:intron | 35.0% | |
TGGAGAACAAAATCCCAAAA+TGG | - | chr1_1:70314045-70314064 | Msa0040240:intron | 35.0% | |
! | TTTCATCAGCGATCCATTTT+GGG | + | chr1_1:70314061-70314080 | None:intergenic | 35.0% |
ATTCTTTCTCCTGCAATTCT+TGG | + | chr1_1:70314121-70314140 | None:intergenic | 35.0% | |
AATTGCAGGAGAAAGAATAG+AGG | - | chr1_1:70314123-70314142 | Msa0040240:five_prime_UTR | 35.0% | |
ATTGCAGGAGAAAGAATAGA+GGG | - | chr1_1:70314124-70314143 | Msa0040240:five_prime_UTR | 35.0% | |
ATGGCACATAATAACGTCTT+CGG | + | chr1_1:70314250-70314269 | None:intergenic | 35.0% | |
TTCAGAATTGGAGGTAGAAA+AGG | - | chr1_1:70314305-70314324 | Msa0040240:intron | 35.0% | |
ATTGGAGGTAGAAAAGGAAT+TGG | - | chr1_1:70314311-70314330 | Msa0040240:intron | 35.0% | |
TTGGAGGTAGAAAAGGAATT+GGG | - | chr1_1:70314312-70314331 | Msa0040240:intron | 35.0% | |
AAAATGGAGACAAAGAAGAG+AGG | - | chr1_1:70314471-70314490 | Msa0040240:intron | 35.0% | |
AAGAAAAAGAGTGATAGAGC+AGG | - | chr1_1:70314671-70314690 | Msa0040240:intron | 35.0% | |
AAAGGGAAGAACAAATTCTC+TGG | - | chr1_1:70314786-70314805 | Msa0040240:five_prime_UTR | 35.0% | |
! | CAAATTCTCTGGAAAAACAG+TGG | - | chr1_1:70314797-70314816 | Msa0040240:five_prime_UTR | 35.0% |
! | GAAAAACAGTGGTGTTTCTA+AGG | - | chr1_1:70314808-70314827 | Msa0040240:five_prime_UTR | 35.0% |
! | GTCTTCATTAGTTCTCTTTG+AGG | + | chr1_1:70314901-70314920 | None:intergenic | 35.0% |
!!! | TTTTAGCTTGTCAAAATGGG+AGG | - | chr1_1:70315004-70315023 | Msa0040240:five_prime_UTR | 35.0% |
ATGACACTCTTATGAAAGCA+TGG | - | chr1_1:70315133-70315152 | Msa0040240:five_prime_UTR | 35.0% | |
AAGAGAGAGAAAATGGGGTA+AGG | - | chr1_1:70307739-70307758 | Msa0040240:CDS | 40.0% | |
!! | TGCCAGATTTCATGGTTTTG+TGG | - | chr1_1:70307808-70307827 | Msa0040240:CDS | 40.0% |
CACCACAAAACCATGAAATC+TGG | + | chr1_1:70307813-70307832 | None:intergenic | 40.0% | |
AAACAGTGACATCAACAGGA+AGG | + | chr1_1:70308059-70308078 | None:intergenic | 40.0% | |
CAAGAAACAGTGACATCAAC+AGG | + | chr1_1:70308063-70308082 | None:intergenic | 40.0% | |
TAACCAACAGAAATTGGCAC+CGG | + | chr1_1:70308588-70308607 | None:intergenic | 40.0% | |
TGGCTTCAGGAAAATCTTAC+AGG | - | chr1_1:70309004-70309023 | Msa0040240:CDS | 40.0% | |
CATCTAGCAAGGGAGATATA+TGG | + | chr1_1:70309096-70309115 | None:intergenic | 40.0% | |
TTGCTTATATTTGGACCGGA+GGG | + | chr1_1:70309261-70309280 | None:intergenic | 40.0% | |
TTTGCTTATATTTGGACCGG+AGG | + | chr1_1:70309262-70309281 | None:intergenic | 40.0% | |
! | TTGCTTATATTTGAGACCGG+AGG | - | chr1_1:70309326-70309345 | Msa0040240:CDS | 40.0% |
! | TGCTTATATTTGAGACCGGA+GGG | - | chr1_1:70309327-70309346 | Msa0040240:CDS | 40.0% |
CGGAGATGTACTATAAGAAG+AGG | - | chr1_1:70309631-70309650 | Msa0040240:CDS | 40.0% | |
CGAATAGGATGTAGCATTTC+GGG | + | chr1_1:70309849-70309868 | None:intergenic | 40.0% | |
ACATCCTATTCGTGCATTCT+TGG | - | chr1_1:70309857-70309876 | Msa0040240:CDS | 40.0% | |
! | TGAGTTTTCTCAGTCATCAG+CGG | - | chr1_1:70309950-70309969 | Msa0040240:CDS | 40.0% |
! | ATCTGCCAGAGTTTTCCTTA+AGG | + | chr1_1:70310048-70310067 | None:intergenic | 40.0% |
AAGGCACAAAACATTGCTGA+AGG | - | chr1_1:70310149-70310168 | Msa0040240:CDS | 40.0% | |
AGCAGAGCTAAAATCTGAGA+AGG | - | chr1_1:70310229-70310248 | Msa0040240:CDS | 40.0% | |
TTTGACTCAACTGGATGCAA+AGG | - | chr1_1:70310316-70310335 | Msa0040240:CDS | 40.0% | |
TTGACTCAACTGGATGCAAA+GGG | - | chr1_1:70310317-70310336 | Msa0040240:CDS | 40.0% | |
!! | ATAAGGATGCTGGTCTTCTT+CGG | - | chr1_1:70310414-70310433 | Msa0040240:CDS | 40.0% |
! | AATTTGCTCAGTTAGCATCC+TGG | + | chr1_1:70310504-70310523 | None:intergenic | 40.0% |
!! | AGTCTGAAGTTAAAGCGTTG+AGG | - | chr1_1:70310534-70310553 | Msa0040240:CDS | 40.0% |
!! | GTCTGAAGTTAAAGCGTTGA+GGG | - | chr1_1:70310535-70310554 | Msa0040240:CDS | 40.0% |
! | CGTGTCACAATGTTTTTCTG+CGG | + | chr1_1:70310720-70310739 | None:intergenic | 40.0% |
!! | CTTGCTTTGGAGCTTAAACA+CGG | - | chr1_1:70310950-70310969 | Msa0040240:CDS | 40.0% |
!! | TTGCTTTGGAGCTTAAACAC+GGG | - | chr1_1:70310951-70310970 | Msa0040240:CDS | 40.0% |
GACCTGGAACTTTCCAAAAA+GGG | - | chr1_1:70310989-70311008 | Msa0040240:CDS | 40.0% | |
!! | AACCCTTTTTGGAAAGTTCC+AGG | + | chr1_1:70310994-70311013 | None:intergenic | 40.0% |
!!! | CTGATCTTTTAAGGTCCTAG+TGG | + | chr1_1:70311080-70311099 | None:intergenic | 40.0% |
CTCTTTGATCTCCTTCAACT+TGG | + | chr1_1:70311116-70311135 | None:intergenic | 40.0% | |
GAAGGAGATCAAAGAGAATC+TGG | - | chr1_1:70311120-70311139 | Msa0040240:CDS | 40.0% | |
GGGCTTGAATAATAGATACC+GGG | - | chr1_1:70311219-70311238 | Msa0040240:CDS | 40.0% | |
TAATAGATACCGGGCTATAC+TGG | - | chr1_1:70311228-70311247 | Msa0040240:CDS | 40.0% | |
ACAGATGCCGCAAAACATTT+AGG | + | chr1_1:70311280-70311299 | None:intergenic | 40.0% | |
GGAGAACTCAAAACTAAAGG+AGG | - | chr1_1:70311315-70311334 | Msa0040240:CDS | 40.0% | |
TCGTGAAAAGTCGAAGGATA+TGG | - | chr1_1:70311372-70311391 | Msa0040240:CDS | 40.0% | |
! | CACTCTTGTTGGTGAGAAAT+CGG | - | chr1_1:70311522-70311541 | Msa0040240:CDS | 40.0% |
AAGGGCTAAATCAAGTAGCT+TGG | - | chr1_1:70311654-70311673 | Msa0040240:CDS | 40.0% | |
AGTGCAGTCTTCTTAACGAA+AGG | - | chr1_1:70311707-70311726 | Msa0040240:CDS | 40.0% | |
AGCATGCTGGTATCTCAATT+GGG | - | chr1_1:70311730-70311749 | Msa0040240:CDS | 40.0% | |
TGAATCCCGATTGGCAAATT+TGG | - | chr1_1:70311918-70311937 | Msa0040240:CDS | 40.0% | |
! | CGAGAAAGTTATTTCCGAGT+TGG | - | chr1_1:70312128-70312147 | Msa0040240:CDS | 40.0% |
! | GAAAGTTATTTCCGAGTTGG+AGG | - | chr1_1:70312131-70312150 | Msa0040240:CDS | 40.0% |
AAACCTTATGCAACAGATGG+AGG | - | chr1_1:70312158-70312177 | Msa0040240:CDS | 40.0% | |
AGGGATTCATCAAGTGTTAG+CGG | - | chr1_1:70312218-70312237 | Msa0040240:CDS | 40.0% | |
AGGTTCTCTTGCAAAAACAC+AGG | - | chr1_1:70312335-70312354 | Msa0040240:CDS | 40.0% | |
TTGAACTACTGGAGATGAAC+AGG | - | chr1_1:70312514-70312533 | Msa0040240:CDS | 40.0% | |
! | CGTGTTCAAATCTGAAATGG+AGG | - | chr1_1:70312578-70312597 | Msa0040240:CDS | 40.0% |
GGAGGTTCTTCGTATGAAAT+TGG | - | chr1_1:70312596-70312615 | Msa0040240:CDS | 40.0% | |
! | TTTTTAGATTCAGCGCCTCA+TGG | + | chr1_1:70312758-70312777 | None:intergenic | 40.0% |
!!! | CGAGAGCTTTTTCATTGAGA+AGG | - | chr1_1:70312794-70312813 | Msa0040240:CDS | 40.0% |
AATAACCTCAAACAGGAGCT+TGG | - | chr1_1:70312870-70312889 | Msa0040240:CDS | 40.0% | |
TCTGTTAAGGGAACAGTTTG+AGG | - | chr1_1:70312893-70312912 | Msa0040240:CDS | 40.0% | |
TACAATGGACAAAGATCTGC+AGG | - | chr1_1:70312956-70312975 | Msa0040240:CDS | 40.0% | |
TCATCGGATTCAAAGTTCAG+AGG | - | chr1_1:70313007-70313026 | Msa0040240:CDS | 40.0% | |
GAGATTATTACACCAGGAAG+TGG | - | chr1_1:70313268-70313287 | Msa0040240:intron | 40.0% | |
TTGAAGTCTCGTACAAACTC+CGG | + | chr1_1:70313450-70313469 | None:intergenic | 40.0% | |
TGCTCATTTAACGCAGGAAT+CGG | + | chr1_1:70313721-70313740 | None:intergenic | 40.0% | |
TTCGGATTTGATAGGCATGA+AGG | - | chr1_1:70313873-70313892 | Msa0040240:intron | 40.0% | |
ATTTGATAGGCATGAAGGCA+AGG | - | chr1_1:70313878-70313897 | Msa0040240:intron | 40.0% | |
AGTAGTTGAAAGATGCATGG+TGG | - | chr1_1:70313906-70313925 | Msa0040240:intron | 40.0% | |
AATTGAAAGACGTGTCAAGG+AGG | - | chr1_1:70313933-70313952 | Msa0040240:intron | 40.0% | |
ACATGTTCGATCTCAACACA+TGG | - | chr1_1:70314025-70314044 | Msa0040240:intron | 40.0% | |
! | CTTTCATCAGCGATCCATTT+TGG | + | chr1_1:70314062-70314081 | None:intergenic | 40.0% |
ACGATGGGATGCTTGAATTA+TGG | - | chr1_1:70314151-70314170 | Msa0040240:five_prime_UTR | 40.0% | |
CGATGGGATGCTTGAATTAT+GGG | - | chr1_1:70314152-70314171 | Msa0040240:five_prime_UTR | 40.0% | |
ATCAAAGCAATCCTGTTCAG+CGG | + | chr1_1:70314181-70314200 | None:intergenic | 40.0% | |
GAACAGGATTGCTTTGATGA+CGG | - | chr1_1:70314183-70314202 | Msa0040240:intron | 40.0% | |
!! | TTGCTTTGATGACGGTTCAA+TGG | - | chr1_1:70314191-70314210 | Msa0040240:intron | 40.0% |
!! | TTTGATGACGGTTCAATGGT+TGG | - | chr1_1:70314195-70314214 | Msa0040240:intron | 40.0% |
!! | TGGTTGGTGAAGCAATGAAA+AGG | - | chr1_1:70314211-70314230 | Msa0040240:intron | 40.0% |
CACATAATAACGTCTTCGGT+TGG | + | chr1_1:70314246-70314265 | None:intergenic | 40.0% | |
CGTTATTATGTGCCATCAGT+CGG | - | chr1_1:70314254-70314273 | Msa0040240:intron | 40.0% | |
TACCTGAATTATCCGACTGA+TGG | + | chr1_1:70314269-70314288 | None:intergenic | 40.0% | |
! | TTCTACCTCCAATTCTGAAG+AGG | + | chr1_1:70314304-70314323 | None:intergenic | 40.0% |
AATATTGGAGAGGCTTGCAT+CGG | - | chr1_1:70314398-70314417 | Msa0040240:intron | 40.0% | |
AGACAGATAGAAGACGTTGA+AGG | - | chr1_1:70314534-70314553 | Msa0040240:intron | 40.0% | |
CTAAGGGACTTCATTCACAT+AGG | - | chr1_1:70314825-70314844 | Msa0040240:five_prime_UTR | 40.0% | |
ACAAGAGTAGTAGCAGCAAA+AGG | - | chr1_1:70314850-70314869 | Msa0040240:five_prime_UTR | 40.0% | |
CAGCACCAGTGTTATGTTGA+CGG | - | chr1_1:70307622-70307641 | Msa0040240:three_prime_UTR | 45.0% | |
AGCACCAGTGTTATGTTGAC+GGG | - | chr1_1:70307623-70307642 | Msa0040240:three_prime_UTR | 45.0% | |
ATGACCCGTCAACATAACAC+TGG | + | chr1_1:70307630-70307649 | None:intergenic | 45.0% | |
GAGAGAAAATGGGGTAAGGA+AGG | - | chr1_1:70307743-70307762 | Msa0040240:CDS | 45.0% | |
GAAAATGGGGTAAGGAAGGA+AGG | - | chr1_1:70307747-70307766 | Msa0040240:CDS | 45.0% | |
GCTGACATTGCCAGATTTCA+TGG | - | chr1_1:70307800-70307819 | Msa0040240:CDS | 45.0% | |
GACACAGCTCCAATATCTTC+TGG | + | chr1_1:70308491-70308510 | None:intergenic | 45.0% | |
AACCAACAGAAATTGGCACC+GGG | + | chr1_1:70308587-70308606 | None:intergenic | 45.0% | |
! | CCTCATTTAAAGCGAGAGCA+AGG | + | chr1_1:70308623-70308642 | None:intergenic | 45.0% |
! | CCTTGCTCTCGCTTTAAATG+AGG | - | chr1_1:70308620-70308639 | Msa0040240:CDS | 45.0% |
TTAAATGAGGCCCTTGCTAG+TGG | - | chr1_1:70308633-70308652 | Msa0040240:CDS | 45.0% | |
!! | GGATTAATCCCCGGATTAGT+CGG | - | chr1_1:70308662-70308681 | Msa0040240:CDS | 45.0% |
! | TACCCAATACCGACTAATCC+GGG | + | chr1_1:70308674-70308693 | None:intergenic | 45.0% |
! | CTACCCAATACCGACTAATC+CGG | + | chr1_1:70308675-70308694 | None:intergenic | 45.0% |
TATACACTGATAGCAAGGCC+TGG | - | chr1_1:70308832-70308851 | Msa0040240:intron | 45.0% | |
CAAGGCCTGGATTCATTATC+AGG | - | chr1_1:70308845-70308864 | Msa0040240:intron | 45.0% | |
ACTCCAGGCGCTTATATTCT+TGG | - | chr1_1:70308945-70308964 | Msa0040240:intron | 45.0% | |
! | GCGCTTATATTCTTGGTGGT+GGG | - | chr1_1:70308952-70308971 | Msa0040240:intron | 45.0% |
ACCCTCTAAATTACTCCCTC+CGG | - | chr1_1:70309243-70309262 | Msa0040240:CDS | 45.0% | |
ACCGGAGGGAGTAATTTAGA+GGG | + | chr1_1:70309247-70309266 | None:intergenic | 45.0% | |
! | GCTTATATTTGAGACCGGAG+GGG | - | chr1_1:70309328-70309347 | Msa0040240:CDS | 45.0% |
! | CTTATATTTGAGACCGGAGG+GGG | - | chr1_1:70309329-70309348 | Msa0040240:CDS | 45.0% |
! | TTATATTTGAGACCGGAGGG+GGG | - | chr1_1:70309330-70309349 | Msa0040240:CDS | 45.0% |
ATGCAGACTCCTTTGCAAGA+AGG | - | chr1_1:70309607-70309626 | Msa0040240:CDS | 45.0% | |
TGCAGACTCCTTTGCAAGAA+GGG | - | chr1_1:70309608-70309627 | Msa0040240:CDS | 45.0% | |
! | TGCTTCTGCCATGGTTCTAT+GGG | + | chr1_1:70309748-70309767 | None:intergenic | 45.0% |
! | ATGCTTCTGCCATGGTTCTA+TGG | + | chr1_1:70309749-70309768 | None:intergenic | 45.0% |
GATTCACCGTGTAGTTCTTC+AGG | - | chr1_1:70309801-70309820 | Msa0040240:CDS | 45.0% | |
TGCTCCAAGAATGCACGAAT+AGG | + | chr1_1:70309864-70309883 | None:intergenic | 45.0% | |
TCAGTCATCAGCGGAAAAAC+AGG | - | chr1_1:70309959-70309978 | Msa0040240:CDS | 45.0% | |
AACCATTCTGAGTCTGAGCA+TGG | - | chr1_1:70309996-70310015 | Msa0040240:CDS | 45.0% | |
ACCATTCTGAGTCTGAGCAT+GGG | - | chr1_1:70309997-70310016 | Msa0040240:CDS | 45.0% | |
AGATCGAACTCGAAGCCTTA+AGG | - | chr1_1:70310030-70310049 | Msa0040240:CDS | 45.0% | |
CGAAGCCTTAAGGAAAACTC+TGG | - | chr1_1:70310040-70310059 | Msa0040240:CDS | 45.0% | |
GGCAGATATACAGTGTGACA+AGG | - | chr1_1:70310061-70310080 | Msa0040240:CDS | 45.0% | |
AGTTCAGTACAACCAGTGTC+TGG | - | chr1_1:70310262-70310281 | Msa0040240:CDS | 45.0% | |
AGTACAACCAGTGTCTGGAA+AGG | - | chr1_1:70310267-70310286 | Msa0040240:CDS | 45.0% | |
TAGCTATCCTTTCCAGACAC+TGG | + | chr1_1:70310277-70310296 | None:intergenic | 45.0% | |
TGACTCAACTGGATGCAAAG+GGG | - | chr1_1:70310318-70310337 | Msa0040240:CDS | 45.0% | |
GTCCAAGATTAACCTTGCAG+AGG | - | chr1_1:70310472-70310491 | Msa0040240:CDS | 45.0% | |
CTCCTCTGCAAGGTTAATCT+TGG | + | chr1_1:70310477-70310496 | None:intergenic | 45.0% | |
GGACCTGGAACTTTCCAAAA+AGG | - | chr1_1:70310988-70311007 | Msa0040240:CDS | 45.0% | |
CTAGATCTTCCAGTATAGCC+CGG | + | chr1_1:70311240-70311259 | None:intergenic | 45.0% | |
! | CTGGAAGATCTAGAGTCTGT+AGG | - | chr1_1:70311247-70311266 | Msa0040240:CDS | 45.0% |
! | ATGTTTTGCGGCATCTGTGA+TGG | - | chr1_1:70311282-70311301 | Msa0040240:CDS | 45.0% |
AGCTCTTCGTGAAAAGTCGA+AGG | - | chr1_1:70311366-70311385 | Msa0040240:CDS | 45.0% | |
AGAGTCATGCCATGTTCTGA+AGG | - | chr1_1:70311489-70311508 | Msa0040240:CDS | 45.0% | |
CGATTTCTCACCAACAAGAG+TGG | + | chr1_1:70311524-70311543 | None:intergenic | 45.0% | |
! | TCTTAACGAAAGGAGCATGC+TGG | - | chr1_1:70311717-70311736 | Msa0040240:CDS | 45.0% |
GAGCATGCTGGTATCTCAAT+TGG | - | chr1_1:70311729-70311748 | Msa0040240:CDS | 45.0% | |
GCATGCTGGTATCTCAATTG+GGG | - | chr1_1:70311731-70311750 | Msa0040240:CDS | 45.0% | |
ACACTCAAGTGAATCCCGAT+TGG | - | chr1_1:70311909-70311928 | Msa0040240:CDS | 45.0% | |
!! | CTTCAAGAAGAGCGTCAGTT+GGG | - | chr1_1:70311958-70311977 | Msa0040240:CDS | 45.0% |
!! | TTCAAGAAGAGCGTCAGTTG+GGG | - | chr1_1:70311959-70311978 | Msa0040240:CDS | 45.0% |
GACTTGGAGCAAAAGAACTC+AGG | - | chr1_1:70312060-70312079 | Msa0040240:CDS | 45.0% | |
! | AAGGTTTTCACCCTCCAACT+CGG | + | chr1_1:70312145-70312164 | None:intergenic | 45.0% |
CTACCTCCATCTGTTGCATA+AGG | + | chr1_1:70312164-70312183 | None:intergenic | 45.0% | |
!! | ATGCTCAAGGTGCCTTTTCT+TGG | + | chr1_1:70312445-70312464 | None:intergenic | 45.0% |
GTTTCAGGAGGAAAATCGCA+AGG | - | chr1_1:70312644-70312663 | Msa0040240:CDS | 45.0% | |
AGCTCTCGTAAACCAAGCTA+AGG | + | chr1_1:70312782-70312801 | None:intergenic | 45.0% | |
GTGAAGATCACTCAGATGCT+CGG | + | chr1_1:70312841-70312860 | None:intergenic | 45.0% | |
AACAGGAGCTTGGTCTGTTA+AGG | - | chr1_1:70312880-70312899 | Msa0040240:CDS | 45.0% | |
ACAGGAGCTTGGTCTGTTAA+GGG | - | chr1_1:70312881-70312900 | Msa0040240:CDS | 45.0% | |
GAAGGAGTCGGTTAGTACAA+TGG | - | chr1_1:70312941-70312960 | Msa0040240:CDS | 45.0% | |
CTCTGCGTTCAACATTTCCA+CGG | + | chr1_1:70313087-70313106 | None:intergenic | 45.0% | |
! | ATTTCAACTTTGGGAGGCTG+AGG | - | chr1_1:70313349-70313368 | Msa0040240:intron | 45.0% |
GACAGAAAGAGTCAGTCTTC+TGG | - | chr1_1:70313508-70313527 | Msa0040240:intron | 45.0% | |
! | CTTCTGGAAAGTGAAATCGG+AGG | - | chr1_1:70313524-70313543 | Msa0040240:intron | 45.0% |
AAGTGAAATCGGAGGACTGA+AGG | - | chr1_1:70313532-70313551 | Msa0040240:intron | 45.0% | |
AGTGAAATCGGAGGACTGAA+GGG | - | chr1_1:70313533-70313552 | Msa0040240:intron | 45.0% | |
TTGAAGGATGGTGTGCTCTA+AGG | + | chr1_1:70313612-70313631 | None:intergenic | 45.0% | |
! | AGCTTTGGCTGTATGCAATC+AGG | - | chr1_1:70313640-70313659 | Msa0040240:CDS | 45.0% |
TTTAACGCAGGAATCGGAAG+AGG | + | chr1_1:70313715-70313734 | None:intergenic | 45.0% | |
CTTTCTCCTGCAATTCTTGG+AGG | + | chr1_1:70314118-70314137 | None:intergenic | 45.0% | |
AAGAATAGAGGGACTGACGA+TGG | - | chr1_1:70314135-70314154 | Msa0040240:five_prime_UTR | 45.0% | |
AGAATAGAGGGACTGACGAT+GGG | - | chr1_1:70314136-70314155 | Msa0040240:five_prime_UTR | 45.0% | |
ATTATGGGAAACCGCTGAAC+AGG | - | chr1_1:70314167-70314186 | Msa0040240:five_prime_UTR | 45.0% | |
TGCCATCAGTCGGATAATTC+AGG | - | chr1_1:70314264-70314283 | Msa0040240:intron | 45.0% | |
!! | CCAATTCTGAAGAGGTGTTC+AGG | + | chr1_1:70314296-70314315 | None:intergenic | 45.0% |
CCTGAACACCTCTTCAGAAT+TGG | - | chr1_1:70314293-70314312 | Msa0040240:intron | 45.0% | |
GAACACCTCTTCAGAATTGG+AGG | - | chr1_1:70314296-70314315 | Msa0040240:intron | 45.0% | |
AAAGAAGAGAGGCCACAAGA+AGG | - | chr1_1:70314482-70314501 | Msa0040240:intron | 45.0% | |
AAGAAGAGAGGCCACAAGAA+GGG | - | chr1_1:70314483-70314502 | Msa0040240:intron | 45.0% | |
AGTCGACACCGAATACGAAA+CGG | - | chr1_1:70314506-70314525 | Msa0040240:intron | 45.0% | |
CGAAAAGGTTCGGAAGAGAT+AGG | - | chr1_1:70314696-70314715 | Msa0040240:five_prime_UTR | 45.0% | |
AAGGTTCGGAAGAGATAGGA+CGG | - | chr1_1:70314700-70314719 | Msa0040240:five_prime_UTR | 45.0% | |
GGAGCTGTGTCTAATTGAGC+AGG | - | chr1_1:70308500-70308519 | Msa0040240:CDS | 50.0% | |
!! | ATCCCCGGATTAGTCGGTAT+TGG | - | chr1_1:70308668-70308687 | Msa0040240:CDS | 50.0% |
!! | TCCCCGGATTAGTCGGTATT+GGG | - | chr1_1:70308669-70308688 | Msa0040240:CDS | 50.0% |
! | ACCCAATACCGACTAATCCG+GGG | + | chr1_1:70308673-70308692 | None:intergenic | 50.0% |
CCTGGAGTCAGAATGCAACA+TGG | + | chr1_1:70308933-70308952 | None:intergenic | 50.0% | |
CCATGTTGCATTCTGACTCC+AGG | - | chr1_1:70308930-70308949 | Msa0040240:intron | 50.0% | |
CCACCAAGAATATAAGCGCC+TGG | + | chr1_1:70308951-70308970 | None:intergenic | 50.0% | |
CCAGGCGCTTATATTCTTGG+TGG | - | chr1_1:70308948-70308967 | Msa0040240:intron | 50.0% | |
GGCGCTTATATTCTTGGTGG+TGG | - | chr1_1:70308951-70308970 | Msa0040240:intron | 50.0% | |
GACCGGAGGGAGTAATTTAG+AGG | + | chr1_1:70309248-70309267 | None:intergenic | 50.0% | |
AGACTCCTTTGCAAGAAGGG+CGG | - | chr1_1:70309611-70309630 | Msa0040240:CDS | 50.0% | |
CTGCTAATGCACGGTATGCT+CGG | + | chr1_1:70309689-70309708 | None:intergenic | 50.0% | |
GTTGGGAAATGCTTCTGCCA+TGG | + | chr1_1:70309757-70309776 | None:intergenic | 50.0% | |
TCAGGGCCTGAAGAACTACA+CGG | + | chr1_1:70309810-70309829 | None:intergenic | 50.0% | |
GCTCAGACTCAGAATGGTTC+TGG | + | chr1_1:70309995-70310014 | None:intergenic | 50.0% | |
CCATTCTGAGTCTGAGCATG+GGG | - | chr1_1:70309998-70310017 | Msa0040240:CDS | 50.0% | |
CATTCTGAGTCTGAGCATGG+GGG | - | chr1_1:70309999-70310018 | Msa0040240:CDS | 50.0% | |
ATTCTGAGTCTGAGCATGGG+GGG | - | chr1_1:70310000-70310019 | Msa0040240:CDS | 50.0% | |
! | ATGCAAAGGGGCATGATGAG+AGG | - | chr1_1:70310330-70310349 | Msa0040240:CDS | 50.0% |
! | TGCAAAGGGGCATGATGAGA+GGG | - | chr1_1:70310331-70310350 | Msa0040240:CDS | 50.0% |
ATCCTTATCAGCTTCGAGCC+TGG | + | chr1_1:70310402-70310421 | None:intergenic | 50.0% | |
CTCGAAGCTGATAAGGATGC+TGG | - | chr1_1:70310404-70310423 | Msa0040240:CDS | 50.0% | |
ACCTTGCAGAGGAGAATTCC+AGG | - | chr1_1:70310483-70310502 | Msa0040240:CDS | 50.0% | |
TCCTGGAATTCTCCTCTGCA+AGG | + | chr1_1:70310487-70310506 | None:intergenic | 50.0% | |
TCTGCAAGGACTGCTTGTAC+AGG | + | chr1_1:70310604-70310623 | None:intergenic | 50.0% | |
CTCGTACTCTCAGTCACAAG+AGG | - | chr1_1:70310916-70310935 | Msa0040240:CDS | 50.0% | |
CTCAGTCACAAGAGGAGCAA+AGG | - | chr1_1:70310924-70310943 | Msa0040240:CDS | 50.0% | |
GGAGCAAAGGTCTCTTGCTT+TGG | - | chr1_1:70310937-70310956 | Msa0040240:CDS | 50.0% | |
TAAACACGGGCTTCAGCTGT+TGG | - | chr1_1:70310964-70310983 | Msa0040240:CDS | 50.0% | |
ATTGGAGAAGAACGCCTTGC+TGG | - | chr1_1:70311591-70311610 | Msa0040240:CDS | 50.0% | |
AGACAGAGACTTCTCCAGCA+AGG | + | chr1_1:70311608-70311627 | None:intergenic | 50.0% | |
!! | GCTTCAAGAAGAGCGTCAGT+TGG | - | chr1_1:70311957-70311976 | Msa0040240:CDS | 50.0% |
TCAAGTGTTAGCGGCTCTTC+AGG | - | chr1_1:70312227-70312246 | Msa0040240:CDS | 50.0% | |
CAGACAGGAGACACGACAAA+GGG | - | chr1_1:70312256-70312275 | Msa0040240:CDS | 50.0% | |
CGACAAAGGGTTCAAGCAAG+AGG | - | chr1_1:70312269-70312288 | Msa0040240:CDS | 50.0% | |
ACTGGAGATGAACAGGCAAC+TGG | - | chr1_1:70312521-70312540 | Msa0040240:CDS | 50.0% | |
CTGGAGATGAACAGGCAACT+GGG | - | chr1_1:70312522-70312541 | Msa0040240:CDS | 50.0% | |
TGGAGATGAACAGGCAACTG+GGG | - | chr1_1:70312523-70312542 | Msa0040240:CDS | 50.0% | |
! | GGAAAATCGCAAGGTGCTTG+AGG | - | chr1_1:70312653-70312672 | Msa0040240:CDS | 50.0% |
GAGCAGTGTGATGTTCCATG+AGG | - | chr1_1:70312740-70312759 | Msa0040240:CDS | 50.0% | |
ACAGACCAAGCTCCTGTTTG+AGG | + | chr1_1:70312878-70312897 | None:intergenic | 50.0% | |
AGAGGAAAAGCTAAAGGCCG+TGG | - | chr1_1:70313067-70313086 | Msa0040240:intron | 50.0% | |
TTTGATGCTGGACGGCGTTT+CGG | - | chr1_1:70313855-70313874 | Msa0040240:intron | 50.0% | |
GACGGCGTTTCGGATTTGAT+AGG | - | chr1_1:70313865-70313884 | Msa0040240:intron | 50.0% | |
ATCCAGCCTCCAAGAATTGC+AGG | - | chr1_1:70314109-70314128 | Msa0040240:five_prime_UTR | 50.0% | |
! | AGAGTGTTCCGTCTTCAAGC+AGG | - | chr1_1:70314610-70314629 | Msa0040240:intron | 50.0% |
GAGTGTTCCGTCTTCAAGCA+GGG | - | chr1_1:70314611-70314630 | Msa0040240:intron | 50.0% | |
GAAGTCTCCCTGCTTGAAGA+CGG | + | chr1_1:70314621-70314640 | None:intergenic | 50.0% | |
GTCTTCAAGCAGGGAGACTT+CGG | - | chr1_1:70314620-70314639 | Msa0040240:intron | 50.0% | |
GTGATAGAGCAGGCACGAAA+AGG | - | chr1_1:70314681-70314700 | Msa0040240:intron | 50.0% | |
AGAGCAGGCACGAAAAGGTT+CGG | - | chr1_1:70314686-70314705 | Msa0040240:intron | 50.0% | |
! | GTCTCCGGTTTGAATCCTCC+CGG | - | chr1_1:70308566-70308585 | Msa0040240:CDS | 55.0% |
! | CAACAGAAATTGGCACCGGG+AGG | + | chr1_1:70308584-70308603 | None:intergenic | 55.0% |
! | CTCCCGGTGCCAATTTCTGT+TGG | - | chr1_1:70308582-70308601 | Msa0040240:CDS | 55.0% |
AGCGAGAGCAAGGCTCTGTA+TGG | + | chr1_1:70308613-70308632 | None:intergenic | 55.0% | |
ATGAGGCCCTTGCTAGTGGA+CGG | - | chr1_1:70308637-70308656 | Msa0040240:CDS | 55.0% | |
ATCCCACCGTCCACTAGCAA+GGG | + | chr1_1:70308646-70308665 | None:intergenic | 55.0% | |
AATCCCACCGTCCACTAGCA+AGG | + | chr1_1:70308647-70308666 | None:intergenic | 55.0% | |
TGGACGGTGGGATTAATCCC+CGG | - | chr1_1:70308653-70308672 | Msa0040240:CDS | 55.0% | |
!!! | GGGGGGTACCATTTTGGGTT+AGG | - | chr1_1:70309347-70309366 | Msa0040240:CDS | 55.0% |
ATGCCACGGGTGAGTATGCT+CGG | + | chr1_1:70309422-70309441 | None:intergenic | 55.0% | |
CATCTCCGCCCTTCTTGCAA+AGG | + | chr1_1:70309619-70309638 | None:intergenic | 55.0% | |
ACGCCAAGCCCATAGAACCA+TGG | - | chr1_1:70309737-70309756 | Msa0040240:CDS | 55.0% | |
! | CTGCCATGGTTCTATGGGCT+TGG | + | chr1_1:70309743-70309762 | None:intergenic | 55.0% |
GTGTAGTTCTTCAGGCCCTG+AGG | - | chr1_1:70309809-70309828 | Msa0040240:CDS | 55.0% | |
! | TGTAGCATTTCGGGTGTGCG+TGG | + | chr1_1:70309840-70309859 | None:intergenic | 55.0% |
CCCCATGCTCAGACTCAGAA+TGG | + | chr1_1:70310001-70310020 | None:intergenic | 55.0% | |
!! | AGAAGAGCGTCAGTTGGGGA+AGG | - | chr1_1:70311963-70311982 | Msa0040240:CDS | 55.0% |
CTCTTCAGGTCGATCCAGAC+AGG | - | chr1_1:70312241-70312260 | Msa0040240:CDS | 55.0% | |
CCTTTGTCGTGTCTCCTGTC+TGG | + | chr1_1:70312258-70312277 | None:intergenic | 55.0% | |
CCAGACAGGAGACACGACAA+AGG | - | chr1_1:70312255-70312274 | Msa0040240:CDS | 55.0% | |
! | CTTGCTGCGAAAGTACGGTG+AGG | + | chr1_1:70312398-70312417 | None:intergenic | 55.0% |
CCTTCTGCTGTTCCACTTCC+TGG | + | chr1_1:70313283-70313302 | None:intergenic | 55.0% | |
CCAGGAAGTGGAACAGCAGA+AGG | - | chr1_1:70313280-70313299 | Msa0040240:intron | 55.0% | |
CTCCTGCAATTCTTGGAGGC+TGG | + | chr1_1:70314114-70314133 | None:intergenic | 55.0% | |
TTCAAGCAGGGAGACTTCGG+TGG | - | chr1_1:70314623-70314642 | Msa0040240:intron | 55.0% | |
GATAGGACGGTTGCAGTTCG+AGG | - | chr1_1:70314713-70314732 | Msa0040240:five_prime_UTR | 55.0% | |
! | AGCAGCAAAAGGCGCAGCAA+AGG | - | chr1_1:70314861-70314880 | Msa0040240:five_prime_UTR | 55.0% |
! | GCAGCAAAAGGCGCAGCAAA+GGG | - | chr1_1:70314862-70314881 | Msa0040240:five_prime_UTR | 55.0% |
! | GGCACCGGGAGGATTCAAAC+CGG | + | chr1_1:70308573-70308592 | None:intergenic | 60.0% |
!!! | ACCGGAGGGGGGTACCATTT+TGG | - | chr1_1:70309341-70309360 | Msa0040240:CDS | 60.0% |
CCCAAAATGGTACCCCCCTC+CGG | + | chr1_1:70309345-70309364 | None:intergenic | 60.0% | |
!!! | CCGGAGGGGGGTACCATTTT+GGG | - | chr1_1:70309342-70309361 | Msa0040240:CDS | 60.0% |
CGGGTGAGTATGCTCGGGTT+TGG | + | chr1_1:70309416-70309435 | None:intergenic | 60.0% | |
AACCCGAGCATACTCACCCG+TGG | - | chr1_1:70309416-70309435 | Msa0040240:CDS | 60.0% | |
TGCCACGGGTGAGTATGCTC+GGG | + | chr1_1:70309421-70309440 | None:intergenic | 60.0% | |
GCCTCAAGCAAGAACTCGCC+AGG | - | chr1_1:70310381-70310400 | Msa0040240:CDS | 60.0% | |
GCCTGGCGAGTTCTTGCTTG+AGG | + | chr1_1:70310385-70310404 | None:intergenic | 60.0% | |
CGCCAGGCTCGAAGCTGATA+AGG | - | chr1_1:70310397-70310416 | Msa0040240:CDS | 60.0% | |
ACACGGGCTTCAGCTGTTGG+AGG | - | chr1_1:70310967-70310986 | Msa0040240:CDS | 60.0% | |
GCTTCAGCTGTTGGAGGACC+TGG | - | chr1_1:70310973-70310992 | Msa0040240:CDS | 60.0% | |
! | GCTGCGAAAGTACGGTGAGG+AGG | + | chr1_1:70312395-70312414 | None:intergenic | 60.0% |
ACTGGGGTCTGAACTGACCG+AGG | - | chr1_1:70312539-70312558 | Msa0040240:CDS | 60.0% | |
CTGGGGTCTGAACTGACCGA+GGG | - | chr1_1:70312540-70312559 | Msa0040240:CDS | 60.0% | |
TGGGGTCTGAACTGACCGAG+GGG | - | chr1_1:70312541-70312560 | Msa0040240:CDS | 60.0% | |
AACTGACCGAGGGGGAAGAG+AGG | - | chr1_1:70312550-70312569 | Msa0040240:CDS | 60.0% | |
ACTGACCGAGGGGGAAGAGA+GGG | - | chr1_1:70312551-70312570 | Msa0040240:CDS | 60.0% | |
GTTCTCCCTCTCTTCCCCCT+CGG | + | chr1_1:70312559-70312578 | None:intergenic | 60.0% | |
!! | CGGTGTCGACTCCCTTCTTG+TGG | + | chr1_1:70314497-70314516 | None:intergenic | 60.0% |
CAGGGAGACTTCGGTGGAGT+TGG | - | chr1_1:70314629-70314648 | Msa0040240:intron | 60.0% | |
!! | AGGCGCAGCAAAGGGTGCTT+CGG | - | chr1_1:70314870-70314889 | Msa0040240:five_prime_UTR | 60.0% |
! | AGGCCCTTGCTAGTGGACGG+TGG | - | chr1_1:70308640-70308659 | Msa0040240:CDS | 65.0% |
! | GGCCCTTGCTAGTGGACGGT+GGG | - | chr1_1:70308641-70308660 | Msa0040240:CDS | 65.0% |
GTGTGCGTGGCTCAGCCTCA+GGG | + | chr1_1:70309827-70309846 | None:intergenic | 65.0% | |
GGGGTCTGAACTGACCGAGG+GGG | - | chr1_1:70312542-70312561 | Msa0040240:CDS | 65.0% | |
!! | CGCAGCAAAGGGTGCTTCGG+CGG | - | chr1_1:70314873-70314892 | Msa0040240:five_prime_UTR | 65.0% |
GGTGTGCGTGGCTCAGCCTC+AGG | + | chr1_1:70309828-70309847 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 70307418 | 70315208 | 70307418 | ID=Msa0040240;Name=Msa0040240 |
chr1_1 | mRNA | 70307418 | 70315208 | 70307418 | ID=Msa0040240-mRNA-1;Parent=Msa0040240;Name=Msa0040240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=691|1|1|1|0.4|0.33|6|285|1779 |
chr1_1 | exon | 70307418 | 70308830 | 70307418 | ID=Msa0040240-mRNA-1:exon:23149;Parent=Msa0040240-mRNA-1 |
chr1_1 | exon | 70308956 | 70313064 | 70308956 | ID=Msa0040240-mRNA-1:exon:23148;Parent=Msa0040240-mRNA-1 |
chr1_1 | exon | 70313601 | 70313812 | 70313601 | ID=Msa0040240-mRNA-1:exon:23147;Parent=Msa0040240-mRNA-1 |
chr1_1 | exon | 70314105 | 70314191 | 70314105 | ID=Msa0040240-mRNA-1:exon:23146;Parent=Msa0040240-mRNA-1 |
chr1_1 | exon | 70314694 | 70315044 | 70314694 | ID=Msa0040240-mRNA-1:exon:23145;Parent=Msa0040240-mRNA-1 |
chr1_1 | exon | 70315065 | 70315208 | 70315065 | ID=Msa0040240-mRNA-1:exon:23144;Parent=Msa0040240-mRNA-1 |
chr1_1 | five_prime_UTR | 70315065 | 70315208 | 70315065 | ID=Msa0040240-mRNA-1:five_prime_utr;Parent=Msa0040240-mRNA-1 |
chr1_1 | five_prime_UTR | 70314694 | 70315044 | 70314694 | ID=Msa0040240-mRNA-1:five_prime_utr;Parent=Msa0040240-mRNA-1 |
chr1_1 | five_prime_UTR | 70314105 | 70314191 | 70314105 | ID=Msa0040240-mRNA-1:five_prime_utr;Parent=Msa0040240-mRNA-1 |
chr1_1 | five_prime_UTR | 70313704 | 70313812 | 70313704 | ID=Msa0040240-mRNA-1:five_prime_utr;Parent=Msa0040240-mRNA-1 |
chr1_1 | CDS | 70313601 | 70313703 | 70313601 | ID=Msa0040240-mRNA-1:cds;Parent=Msa0040240-mRNA-1 |
chr1_1 | CDS | 70308956 | 70313064 | 70308956 | ID=Msa0040240-mRNA-1:cds;Parent=Msa0040240-mRNA-1 |
chr1_1 | CDS | 70307703 | 70308830 | 70307703 | ID=Msa0040240-mRNA-1:cds;Parent=Msa0040240-mRNA-1 |
chr1_1 | three_prime_UTR | 70307418 | 70307702 | 70307418 | ID=Msa0040240-mRNA-1:three_prime_utr;Parent=Msa0040240-mRNA-1 |
Gene Sequence |
Protein sequence |